AlfalfaGEDB | MS.gene007678

M. sativa cultivar XinJiangDaYe / MS.gene007678

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016491
PFAM: PF00106.28

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene007678.t1	XP_013455994.1	96.3	273	10	0	1	273	1	273	1.90E-146	528.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene007678.t1	Q9X248	35.8	254	153	6	11	264	3	246	8.2e-34	145.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene007678.t1	I3T7Z9	96.3	273	10	0	1	273	1	273	1.3e-146	528.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene018066	MS.gene007678	PPI
MS.gene28848	MS.gene007678	PPI
MS.gene87026	MS.gene007678	PPI
MS.gene070761	MS.gene007678	PPI
MS.gene68956	MS.gene007678	PPI
MS.gene007678	MS.gene50524	PPI
MS.gene003925	MS.gene007678	PPI
MS.gene62193	MS.gene007678	PPI
MS.gene070760	MS.gene007678	PPI
MS.gene007678	MS.gene045436	PPI
MS.gene007678	MS.gene03319	PPI
MS.gene073684	MS.gene007678	PPI
MS.gene056339	MS.gene007678	PPI
MS.gene07096	MS.gene007678	PPI
MS.gene007678	MS.gene63482	PPI
MS.gene54952	MS.gene007678	PPI
MS.gene007678	MS.gene043387	PPI
MS.gene050432	MS.gene007678	PPI
MS.gene007678	MS.gene04700	PPI
MS.gene007678	MS.gene014425	PPI
MS.gene007678	MS.gene68880	PPI
MS.gene007678	MS.gene08695	PPI
MS.gene007678	MS.gene042142	PPI
MS.gene007678	MS.gene008161	PPI
MS.gene012794	MS.gene007678	PPI
MS.gene52742	MS.gene007678	PPI
MS.gene007678	MS.gene006999	PPI
MS.gene007006	MS.gene007678	PPI
MS.gene007678	MS.gene42114	PPI
MS.gene072664	MS.gene007678	PPI
MS.gene007678	MS.gene021442	PPI
MS.gene006731	MS.gene007678	PPI
MS.gene28847	MS.gene007678	PPI
MS.gene62194	MS.gene007678	PPI
MS.gene63307	MS.gene007678	PPI
MS.gene54598	MS.gene007678	PPI
MS.gene007678	MS.gene25667	PPI
MS.gene008162	MS.gene007678	PPI
MS.gene007678	MS.gene30551	PPI
MS.gene007678	MS.gene23019	PPI
MS.gene007678	MS.gene055846	PPI
MS.gene015282	MS.gene007678	PPI
MS.gene007678	MS.gene63300	PPI
MS.gene007678	MS.gene25674	PPI
MS.gene54548	MS.gene007678	PPI
MS.gene007678	MS.gene87780	PPI
MS.gene007678	MS.gene008153	PPI
MS.gene065380	MS.gene007678	PPI
MS.gene42260	MS.gene007678	PPI
MS.gene08694	MS.gene007678	PPI
MS.gene064756	MS.gene007678	PPI
MS.gene003926	MS.gene007678	PPI
MS.gene007678	MS.gene80360	PPI
MS.gene007678	MS.gene008160	PPI
MS.gene52743	MS.gene007678	PPI
MS.gene007678	MS.gene08756	PPI
MS.gene007678	MS.gene024269	PPI
MS.gene007678	MS.gene003729	PPI
MS.gene007678	MS.gene050131	PPI
MS.gene50522	MS.gene007678	PPI
MS.gene63484	MS.gene007678	PPI
MS.gene62187	MS.gene007678	PPI
MS.gene007678	MS.gene028938	PPI
MS.gene012681	MS.gene007678	PPI
MS.gene007678	MS.gene003992	PPI
MS.gene31648	MS.gene007678	PPI
MS.gene007678	MS.gene62195	PPI
MS.gene021164	MS.gene007678	PPI
MS.gene63483	MS.gene007678	PPI
MS.gene09624	MS.gene007678	PPI
MS.gene007678	MS.gene018066	PPI
MS.gene42856	MS.gene007678	PPI
MS.gene050431	MS.gene007678	PPI
MS.gene63403	MS.gene007678	PPI
MS.gene019786	MS.gene007678	PPI
MS.gene007678	MS.gene007002	PPI
MS.gene007678	MS.gene43481	PPI
MS.gene85724	MS.gene007678	PPI
MS.gene007678	MS.gene43514	PPI
MS.gene41122	MS.gene007678	PPI
MS.gene63306	MS.gene007678	PPI
MS.gene63308	MS.gene007678	PPI
MS.gene007678	MS.gene072664	PPI
MS.gene007678	MS.gene07097	PPI
MS.gene033685	MS.gene007678	PPI
MS.gene007678	MS.gene52742	PPI
MS.gene007678	MS.gene31507	PPI
MS.gene007678	MS.gene059170	PPI
MS.gene007678	MS.gene95020	PPI
MS.gene007678	MS.gene065380	PPI
MS.gene007678	MS.gene070758	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene007678.t1	MTR_4g058840	96.337	273	10	0	1	273	1	273	0.0	539
MS.gene007678.t1	MTR_4g058820	96.337	273	10	0	1	273	1	273	0.0	539
MS.gene007678.t1	MTR_4g058810	94.872	273	14	0	1	273	1	273	0.0	532
MS.gene007678.t1	MTR_1g051165	71.273	275	74	1	4	273	7	281	2.35e-142	401
MS.gene007678.t1	MTR_4g058830	90.608	181	16	1	93	273	40	219	3.80e-117	335
MS.gene007678.t1	MTR_3g085740	32.308	260	166	6	6	264	70	320	3.48e-32	120
MS.gene007678.t1	MTR_1g007800	30.556	252	173	2	14	264	6	256	3.10e-29	112
MS.gene007678.t1	MTR_3g068085	30.769	260	167	9	11	267	15	264	1.78e-28	110
MS.gene007678.t1	MTR_4g052300	31.522	276	163	8	5	270	2	261	2.71e-28	109
MS.gene007678.t1	MTR_4g052320	31.599	269	173	6	5	270	2	262	3.23e-28	109
MS.gene007678.t1	MTR_3g068070	30.268	261	169	9	10	267	14	264	3.34e-27	106
MS.gene007678.t1	MTR_4g052350	32.700	263	165	7	11	270	14	267	4.66e-27	106
MS.gene007678.t1	MTR_4g052340	30.418	263	171	7	11	270	14	267	2.67e-26	104
MS.gene007678.t1	MTR_3g068065	30.385	260	168	10	11	267	17	266	5.16e-26	103
MS.gene007678.t1	MTR_3g068155	29.119	261	172	9	10	267	18	268	1.14e-24	100
MS.gene007678.t1	MTR_6g023590	27.132	258	171	6	11	261	13	260	1.81e-24	99.4
MS.gene007678.t1	MTR_3g068175	31.034	261	167	11	10	267	16	266	1.07e-23	97.4
MS.gene007678.t1	MTR_7g063330	29.297	256	171	6	11	263	15	263	2.37e-23	96.3
MS.gene007678.t1	MTR_7g110130	29.520	271	147	8	11	261	6	252	2.69e-23	96.3
MS.gene007678.t1	MTR_2g090165	29.670	273	164	6	1	264	1	254	2.87e-23	95.9
MS.gene007678.t1	MTR_4g064883	28.846	260	172	9	11	267	14	263	7.42e-23	95.1
MS.gene007678.t1	MTR_6g023610	29.020	255	154	8	11	253	13	252	1.24e-22	94.4
MS.gene007678.t1	MTR_7g110140	31.783	258	157	7	11	261	6	251	1.33e-22	94.4
MS.gene007678.t1	MTR_7g063320	28.682	258	173	6	11	264	15	265	3.45e-22	93.2
MS.gene007678.t1	MTR_1g082760	27.881	269	176	6	6	266	35	293	6.94e-22	92.8
MS.gene007678.t1	MTR_3g068175	30.566	265	167	12	10	267	16	270	1.40e-21	91.7
MS.gene007678.t1	MTR_6g023950	26.641	259	171	6	11	261	13	260	2.23e-21	90.9
MS.gene007678.t1	MTR_7g094520	28.409	264	180	7	1	261	1	258	6.54e-21	89.7
MS.gene007678.t1	MTR_7g063390	29.344	259	170	8	11	264	16	266	2.18e-20	88.2
MS.gene007678.t1	MTR_7g094510	29.545	264	162	11	7	261	5	253	2.43e-20	87.8
MS.gene007678.t1	MTR_3g087850	34.021	194	113	7	15	206	30	210	2.46e-20	88.6
MS.gene007678.t1	MTR_7g083870	29.389	262	167	7	11	263	35	287	2.89e-20	88.6
MS.gene007678.t1	MTR_4g064887	27.165	254	178	5	11	264	15	261	3.19e-20	87.8
MS.gene007678.t1	MTR_6g035395	27.132	258	156	5	11	261	5	237	3.33e-20	87.4
MS.gene007678.t1	MTR_4g131740	29.259	270	160	11	7	261	36	289	1.67e-19	86.3
MS.gene007678.t1	MTR_6g023910	26.800	250	166	7	11	253	13	252	5.87e-19	84.3
MS.gene007678.t1	MTR_7g063360	29.070	258	172	8	11	264	16	266	6.11e-19	84.3
MS.gene007678.t1	MTR_7g071680	29.455	275	163	8	11	263	29	294	6.63e-19	84.7
MS.gene007678.t1	MTR_7g105590	32.461	191	120	5	11	200	8	190	1.14e-18	82.0
MS.gene007678.t1	MTR_7g113650	24.354	271	179	7	6	264	35	291	1.48e-18	83.6
MS.gene007678.t1	MTR_1196s0010	29.688	256	160	11	9	261	274	512	1.50e-18	85.5
MS.gene007678.t1	MTR_7g105580	30.038	263	151	8	1	261	4	235	2.89e-18	82.4
MS.gene007678.t1	MTR_7g110160	27.473	273	152	6	1	264	1	236	2.97e-18	82.0
MS.gene007678.t1	MTR_7g063260	26.459	257	178	6	11	263	16	265	3.07e-18	82.4
MS.gene007678.t1	MTR_7g063270	26.070	257	178	7	11	263	16	264	8.51e-18	81.3
MS.gene007678.t1	MTR_4g078630	29.412	272	171	7	2	263	11	271	1.50e-17	80.9
MS.gene007678.t1	MTR_3g087860	35.429	175	99	6	33	206	34	195	1.77e-17	80.5
MS.gene007678.t1	MTR_3g020670	29.927	274	160	8	7	263	12	270	2.38e-17	80.1
MS.gene007678.t1	MTR_6g023990	25.292	257	177	6	11	261	14	261	4.56e-17	79.0
MS.gene007678.t1	MTR_7g107670	28.736	261	169	8	11	263	33	284	5.22e-17	79.3
MS.gene007678.t1	MTR_6g023600	25.197	254	181	5	11	261	13	260	6.19e-17	78.6
MS.gene007678.t1	MTR_4g132850	28.517	263	166	9	5	261	1	247	6.20e-17	78.6
MS.gene007678.t1	MTR_4g105310	30.622	209	122	6	17	206	52	256	1.12e-16	78.2
MS.gene007678.t1	MTR_8g442750	28.958	259	168	8	11	261	14	264	1.98e-16	77.8
MS.gene007678.t1	MTR_4g105310	27.969	261	158	8	17	256	52	303	2.02e-16	78.2
MS.gene007678.t1	MTR_7g080410	31.034	203	132	6	1	200	28	225	2.17e-16	77.8
MS.gene007678.t1	MTR_8g044240	29.744	195	131	4	16	206	74	266	2.57e-16	78.2
MS.gene007678.t1	MTR_7g080410	31.034	203	132	6	1	200	28	225	2.71e-16	77.4
MS.gene007678.t1	MTR_3g086210	30.526	190	125	4	13	199	53	238	3.54e-16	77.4
MS.gene007678.t1	MTR_7g105460	27.106	273	170	9	11	270	13	269	1.36e-15	75.1
MS.gene007678.t1	MTR_4g097510	29.952	207	130	7	14	215	5	201	1.36e-15	75.1
MS.gene007678.t1	MTR_6g088500	25.463	216	146	4	5	206	172	386	5.04e-15	75.1
MS.gene007678.t1	MTR_4g064887	28.934	197	134	4	10	206	14	204	5.29e-15	72.8
MS.gene007678.t1	MTR_6g088500	25.463	216	146	4	5	206	172	386	6.87e-15	74.3
MS.gene007678.t1	MTR_8g096620	28.500	200	136	5	9	208	43	235	8.92e-15	73.6
MS.gene007678.t1	MTR_8g089575	27.461	193	127	4	13	199	47	232	1.12e-14	73.2
MS.gene007678.t1	MTR_3g077410	27.570	214	132	5	12	206	36	245	5.81e-14	71.2
MS.gene007678.t1	MTR_6g023600	24.803	254	176	6	11	261	13	254	3.85e-13	68.2
MS.gene007678.t1	MTR_4g134660	28.788	198	133	6	11	206	6	197	1.52e-12	65.9
MS.gene007678.t1	MTR_4g086400	27.536	207	131	7	12	206	5	204	1.93e-12	67.4
MS.gene007678.t1	MTR_8g096580	26.639	244	158	9	2	241	36	262	3.62e-12	65.9
MS.gene007678.t1	MTR_7g099850	25.000	276	179	8	2	257	23	290	4.42e-12	65.5
MS.gene007678.t1	MTR_4g086410	29.327	208	126	8	12	206	5	204	6.20e-12	65.9
MS.gene007678.t1	MTR_1g068955	26.562	256	175	9	5	255	9	256	9.38e-12	64.3
MS.gene007678.t1	MTR_3g086190	28.500	200	136	5	13	208	46	242	1.79e-11	63.9
MS.gene007678.t1	MTR_7g105570	30.208	192	116	7	89	270	43	226	9.61e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene007678.t1	AT3G55290	67.647	272	86	2	3	273	10	280	9.38e-137	387
MS.gene007678.t1	AT3G55290	67.647	272	86	2	3	273	9	279	1.47e-136	386
MS.gene007678.t1	AT3G55310	65.441	272	92	2	3	273	9	279	5.70e-133	377
MS.gene007678.t1	AT3G46170	65.441	272	92	2	3	273	18	288	2.75e-132	376
MS.gene007678.t1	AT1G62610	64.469	273	94	2	3	273	6	277	3.71e-131	373
MS.gene007678.t1	AT1G62610	64.469	273	94	2	3	273	5	276	3.96e-131	372
MS.gene007678.t1	AT1G62610	64.469	273	94	2	3	273	7	278	4.53e-131	372
MS.gene007678.t1	AT1G63380	64.103	273	95	2	3	273	7	278	4.60e-131	372
MS.gene007678.t1	AT1G63380	64.103	273	95	2	3	273	11	282	6.04e-131	372
MS.gene007678.t1	AT1G62610	64.469	273	94	2	3	273	11	282	6.21e-131	372
MS.gene007678.t1	AT1G63380	64.103	273	95	2	3	273	9	280	6.85e-131	372
MS.gene007678.t1	AT1G63380	64.103	273	95	2	3	273	14	285	8.25e-131	372
MS.gene007678.t1	AT2G17845	65.918	267	88	2	10	273	46	312	1.79e-127	365
MS.gene007678.t1	AT3G01980	32.677	254	168	3	13	264	5	257	1.39e-41	144
MS.gene007678.t1	AT3G01980	32.677	254	168	3	13	264	5	257	1.39e-41	144
MS.gene007678.t1	AT3G01980	34.101	217	141	2	50	264	17	233	3.23e-38	134
MS.gene007678.t1	AT3G01980	29.225	284	168	4	13	264	5	287	3.26e-35	128
MS.gene007678.t1	AT5G06060	33.716	261	160	9	10	267	8	258	6.90e-31	116
MS.gene007678.t1	AT1G24360	30.769	260	164	8	6	261	69	316	6.82e-29	112
MS.gene007678.t1	AT3G01980	32.571	175	115	3	13	185	5	178	6.55e-26	100
MS.gene007678.t1	AT2G29150	29.455	275	179	8	1	269	1	266	7.67e-25	100
MS.gene007678.t1	AT3G51680	31.022	274	158	8	11	263	32	295	1.67e-24	100
MS.gene007678.t1	AT3G26770	30.072	276	166	9	11	271	41	304	8.90e-24	98.2
MS.gene007678.t1	AT2G29260	29.811	265	172	11	6	267	64	317	1.23e-23	98.2
MS.gene007678.t1	AT5G18210	29.688	256	168	9	10	259	7	256	2.32e-23	96.3
MS.gene007678.t1	AT2G29370	28.727	275	182	8	1	269	1	267	4.70e-23	95.5
MS.gene007678.t1	AT2G29350	28.185	259	176	7	10	267	14	263	1.78e-22	94.0
MS.gene007678.t1	AT4G13180	30.588	255	166	8	11	261	13	260	3.87e-22	92.8
MS.gene007678.t1	AT5G65205	36.082	194	109	7	15	206	10	190	1.85e-21	91.7
MS.gene007678.t1	AT3G26760	28.030	264	170	5	11	263	36	290	2.14e-21	91.7
MS.gene007678.t1	AT1G07440	28.253	269	178	10	2	267	4	260	2.79e-21	90.9
MS.gene007678.t1	AT1G54870	27.509	269	173	8	6	264	79	335	3.35e-21	91.7
MS.gene007678.t1	AT1G54870	27.509	269	173	8	6	264	77	333	3.72e-21	91.7
MS.gene007678.t1	AT2G29360	29.197	274	178	10	1	267	1	265	6.01e-21	89.7
MS.gene007678.t1	AT5G10050	34.536	194	112	7	15	206	9	189	7.96e-21	89.7
MS.gene007678.t1	AT2G29290	26.357	258	183	5	10	267	6	256	1.29e-20	89.0
MS.gene007678.t1	AT5G18210	30.041	243	158	9	10	246	7	243	7.40e-20	87.0
MS.gene007678.t1	AT3G03980	28.253	269	171	10	6	261	9	268	1.03e-19	86.7
MS.gene007678.t1	AT1G52340	29.167	264	170	6	11	263	18	275	1.30e-19	86.7
MS.gene007678.t1	AT2G30670	26.744	258	180	7	11	267	7	256	2.96e-19	85.1
MS.gene007678.t1	AT1G67730	31.579	209	134	5	5	208	41	245	4.40e-19	85.5
MS.gene007678.t1	AT3G47360	31.000	200	131	5	8	207	42	234	6.78e-19	85.1
MS.gene007678.t1	AT2G29310	28.517	263	169	10	11	267	7	256	4.43e-18	82.0
MS.gene007678.t1	AT1G10310	30.612	196	128	5	11	206	15	202	5.09e-18	81.3
MS.gene007678.t1	AT1G49670	31.280	211	124	7	13	210	6	208	7.76e-18	83.6
MS.gene007678.t1	AT1G49670	31.401	207	121	7	17	210	10	208	8.64e-18	83.2
MS.gene007678.t1	AT2G47140	28.517	263	165	7	11	264	6	254	1.08e-17	80.9
MS.gene007678.t1	AT3G47350	28.365	208	142	5	8	215	41	241	1.74e-17	80.9
MS.gene007678.t1	AT3G47350	28.365	208	142	5	8	215	41	241	1.86e-17	80.9
MS.gene007678.t1	AT2G29350	29.379	177	117	6	92	267	56	225	4.89e-17	78.6
MS.gene007678.t1	AT2G47130	27.308	260	171	5	11	264	6	253	4.92e-17	79.0
MS.gene007678.t1	AT1G24470	27.749	191	127	5	13	199	52	235	5.54e-17	79.7
MS.gene007678.t1	AT3G05260	25.660	265	176	8	6	261	32	284	8.00e-17	79.0
MS.gene007678.t1	AT2G29290	27.660	188	130	5	81	267	57	239	9.08e-17	77.8
MS.gene007678.t1	AT3G42960	31.461	267	150	9	14	263	11	261	9.14e-17	78.6
MS.gene007678.t1	AT2G47120	26.070	257	177	6	11	264	6	252	1.73e-16	77.4
MS.gene007678.t1	AT2G47120	26.070	257	177	6	11	264	7	253	1.75e-16	77.4
MS.gene007678.t1	AT5G50690	31.336	217	133	9	13	223	47	253	3.78e-16	77.0
MS.gene007678.t1	AT5G50590	31.336	217	133	9	13	223	47	253	3.78e-16	77.0
MS.gene007678.t1	AT5G50690	31.795	195	120	7	13	204	47	231	4.40e-16	76.3
MS.gene007678.t1	AT5G50590	31.795	195	120	7	13	204	47	231	4.40e-16	76.3
MS.gene007678.t1	AT5G50600	32.178	202	126	7	9	208	43	235	4.86e-16	77.4
MS.gene007678.t1	AT5G50700	32.178	202	126	7	9	208	43	235	4.86e-16	77.4
MS.gene007678.t1	AT1G07450	26.154	260	178	9	11	267	8	256	9.10e-16	75.5
MS.gene007678.t1	AT5G61830	30.579	242	116	7	15	207	38	276	1.51e-15	75.5
MS.gene007678.t1	AT5G61830	30.579	242	116	7	15	207	38	276	1.51e-15	75.5
MS.gene007678.t1	AT2G29340	26.255	259	180	8	11	267	7	256	1.52e-15	74.7
MS.gene007678.t1	AT2G29340	26.255	259	180	8	11	267	7	256	2.39e-15	75.1
MS.gene007678.t1	AT3G29260	27.692	260	170	6	11	264	6	253	3.36e-15	73.9
MS.gene007678.t1	AT2G29320	26.923	260	178	9	11	267	13	263	3.70e-15	73.9
MS.gene007678.t1	AT3G29250	26.894	264	168	5	11	264	42	290	1.06e-14	72.8
MS.gene007678.t1	AT3G29250	27.985	268	154	7	11	261	6	251	1.17e-14	72.4
MS.gene007678.t1	AT3G29250	26.894	264	168	5	11	264	44	292	1.28e-14	72.8
MS.gene007678.t1	AT5G04900	28.205	195	133	5	16	206	82	273	1.54e-14	73.2
MS.gene007678.t1	AT3G04000	24.265	272	183	9	7	264	10	272	2.73e-14	71.6
MS.gene007678.t1	AT2G29350	27.805	205	140	5	10	213	14	211	1.59e-13	68.6
MS.gene007678.t1	AT2G29330	24.615	260	183	8	11	267	7	256	3.92e-13	68.2
MS.gene007678.t1	AT3G03330	28.646	192	132	3	11	200	41	229	7.30e-13	68.2
MS.gene007678.t1	AT2G29310	30.435	207	126	9	11	211	7	201	2.05e-12	65.1
MS.gene007678.t1	AT2G29300	24.419	258	187	6	11	267	7	257	2.93e-12	65.5
MS.gene007678.t1	AT2G37540	25.940	266	170	8	10	256	30	287	4.51e-12	65.5
MS.gene007678.t1	AT5G50130	25.837	209	132	5	17	206	7	211	7.13e-12	64.7
MS.gene007678.t1	AT5G50130	25.837	209	132	5	17	206	7	211	1.18e-11	64.3
MS.gene007678.t1	AT5G50130	25.714	210	132	6	17	206	7	212	3.36e-11	62.8
MS.gene007678.t1	AT5G50130	25.714	210	132	6	17	206	7	212	5.46e-11	62.4

Find 78 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAGTGCCCCATTCTCTTAA+TGG	0.197409	4.3:+42543143	None:intergenic
CAGAAGGCGTGGGAGGCTTT+TGG	0.275675	4.3:-42546152	MS.gene007678:CDS
ATCAATATCTCTTCAATTGC+TGG	0.294772	4.3:-42544498	MS.gene007678:CDS
ACAGGTGATGGCATTGGAAT+TGG	0.295752	4.3:-42543276	MS.gene007678:intron
CAGGTGATGGCATTGGAATT+GGG	0.298175	4.3:-42543275	MS.gene007678:CDS
GTGTTTAAAACAAACATAAA+TGG	0.315012	4.3:-42544585	MS.gene007678:CDS
ATTCATAGTGAGGAATAAAT+AGG	0.326565	4.3:+42543014	None:intergenic
ACGTGATTTCTGCCTTGATC+TGG	0.366903	4.3:-42546327	MS.gene007678:CDS
GCAGAAATCACGTCCGATTC+CGG	0.367971	4.3:+42546337	None:intergenic
AAAATTTGATGAAGAAAGAT+TGG	0.382710	4.3:-42543193	MS.gene007678:CDS
TGCCTTGATCTGGCTCGTGC+TGG	0.384037	4.3:-42546317	MS.gene007678:CDS
ATCAATAATGCCGGTGTTAG+AGG	0.395800	4.3:-42546113	MS.gene007678:intron
GGTGACAAGGACAACTTTGC+CGG	0.399560	4.3:+42546370	None:intergenic
AACAGTGCCATTAAGAGAAT+GGG	0.402159	4.3:-42543150	MS.gene007678:CDS
GATGCTGGTGCTACCTTACC+AGG	0.410122	4.3:-42543041	MS.gene007678:CDS
GAGCTTGATGTGGCGGCTGA+TGG	0.434808	4.3:-42546197	MS.gene007678:CDS
CTTGTCACCGGCGCATCAGC+CGG	0.455292	4.3:-42546356	MS.gene007678:CDS
CGAGCAATTGATGTTAATGC+TGG	0.468893	4.3:+42543116	None:intergenic
ATTTCAGATTTGAAAAGTCC+TGG	0.476294	4.3:+42543221	None:intergenic
ACCGGCGCATCAGCCGGAAT+CGG	0.477929	4.3:-42546350	MS.gene007678:CDS
TCCGATTCCGGCTGATGCGC+CGG	0.478445	4.3:+42546349	None:intergenic
TTCAATTGCTGGCCTAGAGA+GGG	0.482491	4.3:-42544487	MS.gene007678:CDS
TCTTAATGGCACTGTTCTCA+TGG	0.487179	4.3:+42543157	None:intergenic
GAACAGTGCCATTAAGAGAA+TGG	0.491704	4.3:-42543151	MS.gene007678:CDS
CTTGATGTGGCGGCTGATGG+TGG	0.496263	4.3:-42546194	MS.gene007678:CDS
AATATATTTATTGCTGATGC+TGG	0.507646	4.3:-42543056	MS.gene007678:CDS
GGCAAAGTTGTCCTTGTCAC+CGG	0.508416	4.3:-42546368	MS.gene007678:CDS
AGAAGTATGTGCAGAAGGCG+TGG	0.508562	4.3:-42546163	MS.gene007678:CDS
GAGGAATAAATAGGAAAGCC+TGG	0.518416	4.3:+42543023	None:intergenic
AGGTGATGGCATTGGAATTG+GGG	0.527360	4.3:-42543274	MS.gene007678:CDS
TGGAATTGACTGAGGAGGAA+TGG	0.528283	4.3:-42544614	MS.gene007678:CDS
CGGCTGATGCGCCGGTGACA+AGG	0.537649	4.3:+42546357	None:intergenic
CTTCAATTGCTGGCCTAGAG+AGG	0.544592	4.3:-42544488	MS.gene007678:CDS
GCATATGCTTGTTCAAAGGC+AGG	0.550266	4.3:-42544444	MS.gene007678:CDS
AAGTCTCCGTGCAGTTGCGG+TGG	0.551617	4.3:-42546219	MS.gene007678:CDS
AAACAAACATAAATGGTACA+TGG	0.552103	4.3:-42544578	MS.gene007678:CDS
AGGAAATGTGAGTTCACCCT+TGG	0.553066	4.3:-42544634	MS.gene007678:CDS
GATTCTTCTGAATATGTGAC+GGG	0.553262	4.3:-42543080	MS.gene007678:CDS
ATAAATAGGAAAGCCTGGTA+AGG	0.560891	4.3:+42543028	None:intergenic
TTCCTCCTCAGTCAATTCCA+AGG	0.561664	4.3:+42544617	None:intergenic
AAACATAAATGGTACATGGT+TGG	0.562444	4.3:-42544574	MS.gene007678:CDS
ATTCAAATTACCTCTAACAC+CGG	0.563895	4.3:+42546103	None:intergenic
TGATTCTTCTGAATATGTGA+CGG	0.567873	4.3:-42543081	MS.gene007678:CDS
CAAGCATATGCAGTTCCACC+GGG	0.568839	4.3:+42544456	None:intergenic
TATAGAGAAGTATGTGCAGA+AGG	0.570186	4.3:-42546168	MS.gene007678:CDS
GAAGTATGTGCAGAAGGCGT+GGG	0.571173	4.3:-42546162	MS.gene007678:CDS
ATCCAGCACGAGCCAGATCA+AGG	0.572658	4.3:+42546315	None:intergenic
GAACCATGGCACGACCTCGC+CGG	0.574081	4.3:-42546389	MS.gene007678:CDS
GATGAAATCAATGGAAAGGA+GGG	0.578092	4.3:-42546242	MS.gene007678:CDS
TTGCCGGCGAGGTCGTGCCA+TGG	0.580382	4.3:+42546386	None:intergenic
GGGAAGTCTCCGTGCAGTTG+CGG	0.586746	4.3:-42546222	MS.gene007678:CDS
TGCGGTGGAGCTTGATGTGG+CGG	0.592898	4.3:-42546204	MS.gene007678:CDS
AACTCATGCGTGATTCAAAG+AGG	0.594350	4.3:-42544533	MS.gene007678:CDS
CAAGGACAACTTTGCCGGCG+AGG	0.595256	4.3:+42546375	None:intergenic
AAATTGACAGGTGATGGCAT+TGG	0.597713	4.3:-42543282	MS.gene007678:intron
ACAAGCATATGCAGTTCCAC+CGG	0.601410	4.3:+42544455	None:intergenic
TCCTCCTCAGTCAATTCCAA+GGG	0.607693	4.3:+42544618	None:intergenic
CATATCAAGTATTCATAGTG+AGG	0.608610	4.3:+42543004	None:intergenic
TGGCAAAGCAACTAGAACCA+TGG	0.609409	4.3:-42546403	MS.gene007678:CDS
TCAATTGCTGGCCTAGAGAG+GGG	0.613681	4.3:-42544486	MS.gene007678:CDS
AACTGCATATGCTTGTTCAA+AGG	0.614285	4.3:-42544448	MS.gene007678:CDS
TCATTGTGTGATGAAATCAA+TGG	0.617419	4.3:-42546251	MS.gene007678:CDS
CAATTGCTGGCCTAGAGAGG+GGG	0.617473	4.3:-42544485	MS.gene007678:CDS
ACCCTTGGAATTGACTGAGG+AGG	0.618106	4.3:-42544619	MS.gene007678:CDS
TGATGAAATCAATGGAAAGG+AGG	0.620320	4.3:-42546243	MS.gene007678:CDS
ATGCGTGATTCAAAGAGGAA+AGG	0.620679	4.3:-42544528	MS.gene007678:CDS
GTATGTGCAGAAGGCGTGGG+AGG	0.631713	4.3:-42546159	MS.gene007678:CDS
CAAGCTCCACCGCAACTGCA+CGG	0.638345	4.3:+42546213	None:intergenic
AGTTGCGGTGGAGCTTGATG+TGG	0.644706	4.3:-42546207	MS.gene007678:CDS
GTGTGATGAAATCAATGGAA+AGG	0.648715	4.3:-42546246	MS.gene007678:CDS
AGAGTGAATTCAATATCACC+AGG	0.649340	4.3:-42543239	MS.gene007678:CDS
TGCTGGATGTCTTGTAATCG+CGG	0.655281	4.3:-42546300	MS.gene007678:CDS
TTCACCCTTGGAATTGACTG+AGG	0.656324	4.3:-42544622	MS.gene007678:CDS
GATGTGTTGATCAATAATGC+CGG	0.669788	4.3:-42546122	MS.gene007678:CDS
ACAGTGCCATTAAGAGAATG+GGG	0.679803	4.3:-42543149	MS.gene007678:CDS
AGGTGTCAATATGCTCACAA+AGG	0.699533	4.3:-42544424	MS.gene007678:intron
GGTGATGGCATTGGAATTGG+GGG	0.700914	4.3:-42543273	MS.gene007678:CDS
TGGATGTCTTGTAATCGCGG+CGG	0.804868	4.3:-42546297	MS.gene007678:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTATAATTTTTTAAAATATA+AGG	-	chr4.3:42544570-42544589	MS.gene007678:CDS	0.0%
!!	AATATTCATCAATTAAAATA+GGG	-	chr4.3:42545860-42545879	MS.gene007678:intron	10.0%
!!!	AAAACTAATACTATTTTTTA+AGG	+	chr4.3:42543956-42543975	None:intergenic	10.0%
!!!	ATTATAGTAGTATATATTTT+TGG	+	chr4.3:42544352-42544371	None:intergenic	10.0%
!!	ACAAAGATAAAATTGAAAAT+AGG	+	chr4.3:42545058-42545077	None:intergenic	15.0%
!!	AGTCTAATACTTATAATATA+AGG	+	chr4.3:42544110-42544129	None:intergenic	15.0%
!!	GAATATTCATCAATTAAAAT+AGG	-	chr4.3:42545859-42545878	MS.gene007678:intron	15.0%
!!	GTCTAATACTTATAATATAA+GGG	+	chr4.3:42544109-42544128	None:intergenic	15.0%
!!	TGTATGAAAAAAATATTGTA+AGG	-	chr4.3:42544428-42544447	MS.gene007678:CDS	15.0%
!!	TTAAATTAAACATTAATCCA+AGG	-	chr4.3:42545238-42545257	MS.gene007678:intron	15.0%
!!	TTTGAATCATAACAAAAATA+TGG	-	chr4.3:42545341-42545360	MS.gene007678:intron	15.0%
!!!	TTAATAATTTTAAGTGTATG+TGG	+	chr4.3:42544728-42544747	None:intergenic	15.0%
!!!	TTTTTGTAATAAAAATTGAC+AGG	-	chr4.3:42546126-42546145	MS.gene007678:CDS	15.0%
!!	AAAATTTGATGAAGAAAGAT+TGG	-	chr4.3:42546227-42546246	MS.gene007678:CDS	20.0%
!!	AATTTCTTGATAAGACAAAA+AGG	+	chr4.3:42545641-42545660	None:intergenic	20.0%
!!	AGTAGTAGTATTAGAATAAA+GGG	+	chr4.3:42545455-42545474	None:intergenic	20.0%
!!	CATTCAATAAATAATGTATG+TGG	+	chr4.3:42545555-42545574	None:intergenic	20.0%
!!	TAGCATGTATATTTACAAAA+AGG	-	chr4.3:42544149-42544168	MS.gene007678:intron	20.0%
!!	TTGTGTAAAAAACTTTGTAA+GGG	-	chr4.3:42545169-42545188	MS.gene007678:intron	20.0%
!!!	AAGGTATTAAAGTGAAATAT+TGG	+	chr4.3:42543937-42543956	None:intergenic	20.0%
!!!	ATATTTTCAAGTTACCAAAA+TGG	-	chr4.3:42544217-42544236	MS.gene007678:intron	20.0%
!!!	ATTTTAAACATTAGACACTT+TGG	-	chr4.3:42544051-42544070	MS.gene007678:intron	20.0%
!!!	CTTTTGCTTATAATAATGAT+CGG	-	chr4.3:42545590-42545609	MS.gene007678:intron	20.0%
!!!	GTGTTTAAAACAAACATAAA+TGG	-	chr4.3:42544835-42544854	MS.gene007678:intron	20.0%
!!!	TAAGCAAAAGTTGATTTTTT+AGG	+	chr4.3:42545580-42545599	None:intergenic	20.0%
!!!	TTCTGACACATTATTTTAAT+GGG	+	chr4.3:42546066-42546085	None:intergenic	20.0%
!!!	TTTCACTTTCTCTATTTTAT+TGG	+	chr4.3:42545777-42545796	None:intergenic	20.0%
!!!	TTTTGGTAACTTGAAAATAT+TGG	+	chr4.3:42544217-42544236	None:intergenic	20.0%
!!!	TTTTTGTCTTATCAAGAAAT+TGG	-	chr4.3:42545640-42545659	MS.gene007678:intron	20.0%
!	AAACAAACATAAATGGTACA+TGG	-	chr4.3:42544842-42544861	MS.gene007678:intron	25.0%
!	AATATATTTATTGCTGATGC+TGG	-	chr4.3:42546364-42546383	MS.gene007678:CDS	25.0%
!	AGAATAGAGAATGTGATAAA+TGG	-	chr4.3:42545197-42545216	MS.gene007678:intron	25.0%
!	ATAAATGAAGAGAGAGAATA+AGG	+	chr4.3:42545735-42545754	None:intergenic	25.0%
!	ATACGGTCTGAAAAAAATTA+TGG	+	chr4.3:42545406-42545425	None:intergenic	25.0%
!	ATATACATGCTAGTAACTTA+AGG	+	chr4.3:42544141-42544160	None:intergenic	25.0%
!	ATGATTTATTGTTTGTGTGA+AGG	-	chr4.3:42543693-42543712	MS.gene007678:intron	25.0%
!	CATTGAAAGGAAGTTTAAAA+AGG	+	chr4.3:42546016-42546035	None:intergenic	25.0%
!	CTTGTGTAAAAAACTTTGTA+AGG	-	chr4.3:42545168-42545187	MS.gene007678:intron	25.0%
!	GAGTAGTAGTATTAGAATAA+AGG	+	chr4.3:42545456-42545475	None:intergenic	25.0%
!	GCTGAAACATATAATTATAC+CGG	-	chr4.3:42543403-42543422	MS.gene007678:intron	25.0%
!	TAATAAAAATTGACAGGTGA+TGG	-	chr4.3:42546132-42546151	MS.gene007678:CDS	25.0%
!	TATACATGCTAGTAACTTAA+GGG	+	chr4.3:42544140-42544159	None:intergenic	25.0%
!	TTCGAGAAAATCATATAATC+CGG	+	chr4.3:42543425-42543444	None:intergenic	25.0%
!!!	GATGAAGTATTTGTTTTCTT+TGG	-	chr4.3:42545612-42545631	MS.gene007678:intron	25.0%
!!!	GTTCTGACACATTATTTTAA+TGG	+	chr4.3:42546067-42546086	None:intergenic	25.0%
!!!	TTAAAAAGGAAGTTTTGTCT+TGG	+	chr4.3:42546002-42546021	None:intergenic	25.0%
!!!	TTGATTCAAAAAGTTGATGA+TGG	-	chr4.3:42543641-42543660	MS.gene007678:intron	25.0%
	AAACATAAATGGTACATGGT+TGG	-	chr4.3:42544846-42544865	MS.gene007678:intron	30.0%
	AGCATAAAATATGTCGAGAA+AGG	+	chr4.3:42544682-42544701	None:intergenic	30.0%
	ATCAATATCTCTTCAATTGC+TGG	-	chr4.3:42544922-42544941	MS.gene007678:intron	30.0%
	ATTCAAATTACCTCTAACAC+CGG	+	chr4.3:42543320-42543339	None:intergenic	30.0%
	ATTTCAGATTTGAAAAGTCC+TGG	+	chr4.3:42546202-42546221	None:intergenic	30.0%
	CTAAAGTTTCCGCATATATA+CGG	+	chr4.3:42545423-42545442	None:intergenic	30.0%
	GATTTATTGTTGTGTTGTGT+AGG	-	chr4.3:42544766-42544785	MS.gene007678:intron	30.0%
	GTCTAACATTTACAACTTGA+TGG	-	chr4.3:42544180-42544199	MS.gene007678:intron	30.0%
	TACAACTTGATGGAACTAAA+GGG	-	chr4.3:42544190-42544209	MS.gene007678:intron	30.0%
	TACACTTGTCATATCAGAAT+TGG	+	chr4.3:42545308-42545327	None:intergenic	30.0%
	TATATATGCGGAAACTTTAG+TGG	-	chr4.3:42545423-42545442	MS.gene007678:intron	30.0%
	TCATTGTGTGATGAAATCAA+TGG	-	chr4.3:42543169-42543188	MS.gene007678:CDS	30.0%
	TGATTCTTCTGAATATGTGA+CGG	-	chr4.3:42546339-42546358	MS.gene007678:CDS	30.0%
	TGGTAAAATCAAGAAGTTCA+CGG	-	chr4.3:42545660-42545679	MS.gene007678:intron	30.0%
	TTACAACTTGATGGAACTAA+AGG	-	chr4.3:42544189-42544208	MS.gene007678:intron	30.0%
!	ATCGTTCTTTATTTGAGATG+TGG	-	chr4.3:42543717-42543736	MS.gene007678:intron	30.0%
!	CTTTTGCTTATAATAGTGAC+TGG	+	chr4.3:42545482-42545501	None:intergenic	30.0%
!	TCTCGACATATTTTATGCTT+TGG	-	chr4.3:42544683-42544702	MS.gene007678:intron	30.0%
!!	AAGTGCTTTTGATTCCATTT+TGG	+	chr4.3:42544234-42544253	None:intergenic	30.0%
!!	AATGGAATCAAAAGCACTTA+TGG	-	chr4.3:42544235-42544254	MS.gene007678:intron	30.0%
!!	ATGGAATCAAAAGCACTTAT+GGG	-	chr4.3:42544236-42544255	MS.gene007678:intron	30.0%
!!	GAATTTGTTTTCATGTGACT+TGG	-	chr4.3:42545083-42545102	MS.gene007678:intron	30.0%
!!	TTTTAAGTGTATGTGGTCAA+AGG	+	chr4.3:42544721-42544740	None:intergenic	30.0%
!!	TTTTTCAGACCGTATATATG+CGG	-	chr4.3:42545411-42545430	MS.gene007678:intron	30.0%
!!!	TCCTTGATTTTAGGATCATT+AGG	-	chr4.3:42545262-42545281	MS.gene007678:intron	30.0%
	AAAGACATACTGACATTGGT+TGG	-	chr4.3:42546101-42546120	MS.gene007678:intron	35.0%
	AACTGCATATGCTTGTTCAA+AGG	-	chr4.3:42544972-42544991	MS.gene007678:intron	35.0%
	AACTTCCTTTCAATGTCTTC+AGG	-	chr4.3:42546021-42546040	MS.gene007678:intron	35.0%
	AAGCAAAGACATACTGACAT+TGG	-	chr4.3:42546097-42546116	MS.gene007678:intron	35.0%
	AAGCGGTGCAATATTGAAAA+GGG	-	chr4.3:42543744-42543763	MS.gene007678:intron	35.0%
	ACACATGGCAACAAGAATTA+AGG	+	chr4.3:42545686-42545705	None:intergenic	35.0%
	ACTCAGAGATCAAAGTGAAA+CGG	-	chr4.3:42544281-42544300	MS.gene007678:intron	35.0%
	ACTTCTTGATTCATCACACA+TGG	+	chr4.3:42545701-42545720	None:intergenic	35.0%
	AGAGTGAATTCAATATCACC+AGG	-	chr4.3:42546181-42546200	MS.gene007678:CDS	35.0%
	ATAAATAGGAAAGCCTGGTA+AGG	+	chr4.3:42546395-42546414	None:intergenic	35.0%
	ATCCTAAAATCAAGGAACCT+TGG	+	chr4.3:42545258-42545277	None:intergenic	35.0%
	ATTGGTCCAAAACAATAGAG+CGG	+	chr4.3:42545759-42545778	None:intergenic	35.0%
	ATTGTCCTGAAGACATTGAA+AGG	+	chr4.3:42546029-42546048	None:intergenic	35.0%
	ATTGTGATTCCTTACGCTAT+CGG	-	chr4.3:42543976-42543995	MS.gene007678:intron	35.0%
	CACTTGGATGATATAGCTTA+TGG	+	chr4.3:42544617-42544636	None:intergenic	35.0%
	GATAGATATTAGACACGACA+TGG	+	chr4.3:42543510-42543529	None:intergenic	35.0%
	GATGAAATCAATGGAAAGGA+GGG	-	chr4.3:42543178-42543197	MS.gene007678:CDS	35.0%
	GATTCTTCTGAATATGTGAC+GGG	-	chr4.3:42546340-42546359	MS.gene007678:CDS	35.0%
	GCCTAATGATCCTAAAATCA+AGG	+	chr4.3:42545266-42545285	None:intergenic	35.0%
	GTCACATGATTGAAATGTCA+CGG	-	chr4.3:42545125-42545144	MS.gene007678:intron	35.0%
	GTGTGATGAAATCAATGGAA+AGG	-	chr4.3:42543174-42543193	MS.gene007678:CDS	35.0%
	TACAGATATTAGACACGACA+TGG	+	chr4.3:42543475-42543494	None:intergenic	35.0%
	TCACATGATTGAAATGTCAC+GGG	-	chr4.3:42545126-42545145	MS.gene007678:intron	35.0%
	TGATGAAATCAATGGAAAGG+AGG	-	chr4.3:42543177-42543196	MS.gene007678:CDS	35.0%
	TGCTTATAATAGTGACTGGA+GGG	+	chr4.3:42545478-42545497	None:intergenic	35.0%
	TTGCTTATAATAGTGACTGG+AGG	+	chr4.3:42545479-42545498	None:intergenic	35.0%
	TTGGATGATATAGCTTATGG+TGG	+	chr4.3:42544614-42544633	None:intergenic	35.0%
	TTTCAATGTCTTCAGGACAA+TGG	-	chr4.3:42546028-42546047	MS.gene007678:intron	35.0%
!	AACAGTGCCATTAAGAGAAT+GGG	-	chr4.3:42546270-42546289	MS.gene007678:CDS	35.0%
!	AGCACTTTTCTTCGAATGAT+TGG	-	chr4.3:42544374-42544393	MS.gene007678:intron	35.0%
!	ATCCAAGGTTCCTTGATTTT+AGG	-	chr4.3:42545253-42545272	MS.gene007678:intron	35.0%
!	ATTAGTCACTTTCAGTCACT+TGG	+	chr4.3:42544633-42544652	None:intergenic	35.0%
!	GAGTTTTGCTACATATGTAG+CGG	+	chr4.3:42543879-42543898	None:intergenic	35.0%
!	GATGTGTTGATCAATAATGC+CGG	-	chr4.3:42543298-42543317	MS.gene007678:intron	35.0%
!	TATAGAGAAGTATGTGCAGA+AGG	-	chr4.3:42543252-42543271	MS.gene007678:CDS	35.0%
!	TTTATCCCGCTCTATTGTTT+TGG	-	chr4.3:42545750-42545769	MS.gene007678:intron	35.0%
!!	AATGTCACGGGTTAAAGTTT+TGG	-	chr4.3:42545138-42545157	MS.gene007678:intron	35.0%
	AACTCATGCGTGATTCAAAG+AGG	-	chr4.3:42544887-42544906	MS.gene007678:intron	40.0%
	AATTCTTAACCATTGCCCTG+AGG	+	chr4.3:42545902-42545921	None:intergenic	40.0%
	AGGTGTCAATATGCTCACAA+AGG	-	chr4.3:42544996-42545015	MS.gene007678:intron	40.0%
	ATGCGTGATTCAAAGAGGAA+AGG	-	chr4.3:42544892-42544911	MS.gene007678:intron	40.0%
	ATTCTTAACCATTGCCCTGA+GGG	+	chr4.3:42545901-42545920	None:intergenic	40.0%
	CAAGCGGTGCAATATTGAAA+AGG	-	chr4.3:42543743-42543762	MS.gene007678:intron	40.0%
	CGAGCAATTGATGTTAATGC+TGG	+	chr4.3:42546307-42546326	None:intergenic	40.0%
	GAGGAATAAATAGGAAAGCC+TGG	+	chr4.3:42546400-42546419	None:intergenic	40.0%
	TCATGTGACGATAACTTTCC+AGG	+	chr4.3:42545114-42545133	None:intergenic	40.0%
	TCTTAATGGCACTGTTCTCA+TGG	+	chr4.3:42546266-42546285	None:intergenic	40.0%
	TTGGTCCAAAACAATAGAGC+GGG	+	chr4.3:42545758-42545777	None:intergenic	40.0%
!	AAATTGACAGGTGATGGCAT+TGG	-	chr4.3:42546138-42546157	MS.gene007678:CDS	40.0%
!	ACAGTGCCATTAAGAGAATG+GGG	-	chr4.3:42546271-42546290	MS.gene007678:CDS	40.0%
!	ATCAATAATGCCGGTGTTAG+AGG	-	chr4.3:42543307-42543326	MS.gene007678:intron	40.0%
!	ATTTGAGATGTGGTACCAAG+CGG	-	chr4.3:42543727-42543746	MS.gene007678:intron	40.0%
!	CTTTTCAATATTGCACCGCT+TGG	+	chr4.3:42543745-42543764	None:intergenic	40.0%
!	GAACAGTGCCATTAAGAGAA+TGG	-	chr4.3:42546269-42546288	MS.gene007678:CDS	40.0%
!!	CGTCTAATCTAAAGAGTGTC+TGG	+	chr4.3:42543360-42543379	None:intergenic	40.0%
!!	CTATCGGTGTTGAACACTTT+GGG	-	chr4.3:42543992-42544011	MS.gene007678:intron	40.0%
	ACAAGCATATGCAGTTCCAC+CGG	+	chr4.3:42544968-42544987	None:intergenic	45.0%
	ACGTGATTTCTGCCTTGATC+TGG	-	chr4.3:42543093-42543112	MS.gene007678:CDS	45.0%
	AGGAAATGTGAGTTCACCCT+TGG	-	chr4.3:42544786-42544805	MS.gene007678:intron	45.0%
	GCATATGCTTGTTCAAAGGC+AGG	-	chr4.3:42544976-42544995	MS.gene007678:intron	45.0%
	TCCTCCTCAGTCAATTCCAA+GGG	+	chr4.3:42544805-42544824	None:intergenic	45.0%
	TGCTGGATGTCTTGTAATCG+CGG	-	chr4.3:42543120-42543139	MS.gene007678:CDS	45.0%
	TGGAATTGACTGAGGAGGAA+TGG	-	chr4.3:42544806-42544825	MS.gene007678:intron	45.0%
	TGGCAAAGCAACTAGAACCA+TGG	-	chr4.3:42543017-42543036	MS.gene007678:CDS	45.0%
	TGTTCAACACCGATAGCGTA+AGG	+	chr4.3:42543988-42544007	None:intergenic	45.0%
	TTCACCCTTGGAATTGACTG+AGG	-	chr4.3:42544798-42544817	MS.gene007678:intron	45.0%
	TTCCTCCTCAGTCAATTCCA+AGG	+	chr4.3:42544806-42544825	None:intergenic	45.0%
!	ACAGGTGATGGCATTGGAAT+TGG	-	chr4.3:42546144-42546163	MS.gene007678:CDS	45.0%
!	AGGTGATGGCATTGGAATTG+GGG	-	chr4.3:42546146-42546165	MS.gene007678:CDS	45.0%
!	CAGGTGATGGCATTGGAATT+GGG	-	chr4.3:42546145-42546164	MS.gene007678:CDS	45.0%
!	GAAGTGCCCCATTCTCTTAA+TGG	+	chr4.3:42546280-42546299	None:intergenic	45.0%
!	TTCAATTGCTGGCCTAGAGA+GGG	-	chr4.3:42544933-42544952	MS.gene007678:intron	45.0%
!!	GCTATCGGTGTTGAACACTT+TGG	-	chr4.3:42543991-42544010	MS.gene007678:intron	45.0%
!!!	TTATAAATTTTATGTAAAAA+AGG	-	chr4.3:42545938-42545957	MS.gene007678:intron	5.0%
	ACCCTTGGAATTGACTGAGG+AGG	-	chr4.3:42544801-42544820	MS.gene007678:intron	50.0%
	CAAGCATATGCAGTTCCACC+GGG	+	chr4.3:42544967-42544986	None:intergenic	50.0%
	CTTGCTAACCAATGCCCTCA+GGG	-	chr4.3:42545884-42545903	MS.gene007678:intron	50.0%
	GCAGAAATCACGTCCGATTC+CGG	+	chr4.3:42543086-42543105	None:intergenic	50.0%
	GGCAAAGTTGTCCTTGTCAC+CGG	-	chr4.3:42543052-42543071	MS.gene007678:CDS	50.0%
	GGTGACAAGGACAACTTTGC+CGG	+	chr4.3:42543053-42543072	None:intergenic	50.0%
	TCTTGCTAACCAATGCCCTC+AGG	-	chr4.3:42545883-42545902	MS.gene007678:intron	50.0%
	TGGATGTCTTGTAATCGCGG+CGG	-	chr4.3:42543123-42543142	MS.gene007678:CDS	50.0%
!	AGAAGTATGTGCAGAAGGCG+TGG	-	chr4.3:42543257-42543276	MS.gene007678:CDS	50.0%
!	CTTCAATTGCTGGCCTAGAG+AGG	-	chr4.3:42544932-42544951	MS.gene007678:intron	50.0%
!	GAAGTATGTGCAGAAGGCGT+GGG	-	chr4.3:42543258-42543277	MS.gene007678:CDS	50.0%
!	GGTGATGGCATTGGAATTGG+GGG	-	chr4.3:42546147-42546166	MS.gene007678:CDS	50.0%
!	TCAATTGCTGGCCTAGAGAG+GGG	-	chr4.3:42544934-42544953	MS.gene007678:intron	50.0%
!	TGTTTCAGCGAGTGTCGTGT+TGG	+	chr4.3:42543392-42543411	None:intergenic	50.0%
!!	TCATGTGACTTGGTGCAACC+TGG	-	chr4.3:42545093-42545112	MS.gene007678:intron	50.0%
	AACCAATGCCCTCAGGGCAA+TGG	-	chr4.3:42545890-42545909	MS.gene007678:intron	55.0%
	AGTTGCGGTGGAGCTTGATG+TGG	-	chr4.3:42543213-42543232	MS.gene007678:CDS	55.0%
	ATCCAGCACGAGCCAGATCA+AGG	+	chr4.3:42543108-42543127	None:intergenic	55.0%
!	AACCATTGCCCTGAGGGCAT+TGG	+	chr4.3:42545895-42545914	None:intergenic	55.0%
!	CAATTGCTGGCCTAGAGAGG+GGG	-	chr4.3:42544935-42544954	MS.gene007678:intron	55.0%
!!	GATGCTGGTGCTACCTTACC+AGG	-	chr4.3:42546379-42546398	MS.gene007678:CDS	55.0%
	AAGTCTCCGTGCAGTTGCGG+TGG	-	chr4.3:42543201-42543220	MS.gene007678:CDS	60.0%
	CAAGCTCCACCGCAACTGCA+CGG	+	chr4.3:42543210-42543229	None:intergenic	60.0%
	CAAGGACAACTTTGCCGGCG+AGG	+	chr4.3:42543048-42543067	None:intergenic	60.0%
	CTAGAGAGGGGGCAATTGCC+CGG	-	chr4.3:42544946-42544965	MS.gene007678:intron	60.0%
	CTTGATGTGGCGGCTGATGG+TGG	-	chr4.3:42543226-42543245	MS.gene007678:CDS	60.0%
	GAGCTTGATGTGGCGGCTGA+TGG	-	chr4.3:42543223-42543242	MS.gene007678:CDS	60.0%
	GGGAAGTCTCCGTGCAGTTG+CGG	-	chr4.3:42543198-42543217	MS.gene007678:CDS	60.0%
	TGCGGTGGAGCTTGATGTGG+CGG	-	chr4.3:42543216-42543235	MS.gene007678:CDS	60.0%
!	GTATGTGCAGAAGGCGTGGG+AGG	-	chr4.3:42543261-42543280	MS.gene007678:CDS	60.0%
!	TGCCTTGATCTGGCTCGTGC+TGG	-	chr4.3:42543103-42543122	MS.gene007678:CDS	60.0%
!!	CAGAAGGCGTGGGAGGCTTT+TGG	-	chr4.3:42543268-42543287	MS.gene007678:CDS	60.0%
	ACCGGCGCATCAGCCGGAAT+CGG	-	chr4.3:42543070-42543089	MS.gene007678:CDS	65.0%
	CGGGCAATTGCCCCCTCTCT+AGG	+	chr4.3:42544948-42544967	None:intergenic	65.0%
	CTTGTCACCGGCGCATCAGC+CGG	-	chr4.3:42543064-42543083	MS.gene007678:CDS	65.0%
	GAACCATGGCACGACCTCGC+CGG	-	chr4.3:42543031-42543050	MS.gene007678:CDS	65.0%
	TCCGATTCCGGCTGATGCGC+CGG	+	chr4.3:42543074-42543093	None:intergenic	65.0%
	GAGAGGGGGCAATTGCCCGG+TGG	-	chr4.3:42544949-42544968	MS.gene007678:intron	70.0%
	TTGCCGGCGAGGTCGTGCCA+TGG	+	chr4.3:42543037-42543056	None:intergenic	70.0%
!	CGGCTGATGCGCCGGTGACA+AGG	+	chr4.3:42543066-42543085	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	42543016	42546426	42543016	ID=MS.gene007678
chr4.3	mRNA	42543016	42546426	42543016	ID=MS.gene007678.t1;Parent=MS.gene007678
chr4.3	exon	42546114	42546426	42546114	ID=MS.gene007678.t1.exon1;Parent=MS.gene007678.t1
chr4.3	CDS	42546114	42546426	42546114	ID=cds.MS.gene007678.t1;Parent=MS.gene007678.t1
chr4.3	exon	42544425	42544654	42544425	ID=MS.gene007678.t1.exon2;Parent=MS.gene007678.t1
chr4.3	CDS	42544425	42544654	42544425	ID=cds.MS.gene007678.t1;Parent=MS.gene007678.t1
chr4.3	exon	42543016	42543294	42543016	ID=MS.gene007678.t1.exon3;Parent=MS.gene007678.t1
chr4.3	CDS	42543016	42543294	42543016	ID=cds.MS.gene007678.t1;Parent=MS.gene007678.t1

Gene Sequence

>MS.gene007678

ATGGCAAAGCAACTAGAACCATGGCACGACCTCGCCGGCAAAGTTGTCCTTGTCACCGGCGCATCAGCCGGAATCGGACGTGATTTCTGCCTTGATCTGGCTCGTGCTGGATGTCTTGTAATCGCGGCGGCTCGTCGTGTAGATCGTTTACAGTCATTGTGTGATGAAATCAATGGAAAGGAGGGAAGTCTCCGTGCAGTTGCGGTGGAGCTTGATGTGGCGGCTGATGGTGGAGCTATAGAGAAGTATGTGCAGAAGGCGTGGGAGGCTTTTGGACATATTGATGTGTTGATCAATAATGCCGGTGTTAGAGGTAATTTGAATTTTAACGTTTAAATCTACCAGACACTCTTTAGATTAGACGTGTCTAACACCAACACGACACTCGCTGAAACATATAATTATACCGGATTATATGATTTTCTCGAATTATTAGTGATATCAGCATGTCAGTGTCCATGTCGTGTCTAATATCTGTAGCATGTCAGTGTCCATGTCGTGTCTAATATCTATCGCATGCTTTATAGATTTCGATGATGTTTACGTTGATTAATTTATATTTAAATATGATTTTGTTTCACTAAATTAATTTTTTTTTTGTCACAAAAATATTGTTGTTTTTTAGTTGATTCAAAAAGTTGATGATGGCTCTTGTTGAAGAAAAAATAAAGTTTATGATGATTTATTGTTTGTGTGAAGGAATCGTTCTTTATTTGAGATGTGGTACCAAGCGGTGCAATATTGAAAAGGGAAAAAAATGTGTGACACAAAATAAAAGTTATTAAAGTTTATACTATTTTCTTTTTTGAATCATAAAGTTTATACTACTTTTTTTTAATCATAAGTTTATACTACTTTGTCCGCTACATATGTAGCAAAACTCTGTTTTTATTTTTTCTTTCTAAATTACTTTTTTGTCCAATATTTCACTTTAATACCTTAAAAAATAGTATTAGTTTTATTGTGATTCCTTACGCTATCGGTGTTGAACACTTTGGGTTCTTGAATTTATTTCATTTTATTTTGATCATCTAAATTTTAAACATTAGACACTTTGGCATGATAAATTACAAACGCTAGACATTTTAATCCCTTATATTATAAGTATTAGACTATTTGATCCCTTAAGTTACTAGCATGTATATTTACAAAAAGGATCATAGCGTCTAACATTTACAACTTGATGGAACTAAAGGGTCCAATATTTTCAAGTTACCAAAATGGAATCAAAAGCACTTATGGGATTAAATTGTCTAATGTTTGTAACTCAGAGATCAAAGTGAAACGGAAAAAACTTAAATGCTAAATAAAACTTAAAAAATATTTCGAAGAACCAAAAATATATACTACTATAATTTAGCACTTTTCTTCGAATGATTGGTTAAATTCAGCAAAAACTTAAAGAACAAAAGTGTATGAAAAAAATATTGTAAGGTAATCAAAAGTAAAGTATTTCAAGCGTTTTTTATAAATAAGTTGTTTATATAGTCGAAGATAAAAGTATAAGATTAAACTATTTTCAAAAAATAATTTTTAAGTTGCTTCTGTAAGTTATTATAATTTTTTAAAATATAAGGCACAAACAGTTGATGCATCCACCATAAGCTATATCATCCAAGTGACTGAAAGTGACTAATTGTAAAATAGAATATATAAAGATTGACCTTTCTCGACATATTTTATGCTTTGGTGTGAGATTGAACCTTTGACCACATACACTTAAAATTATTAATAAATTTTTAACGTTTTTGATTTATTGTTGTGTTGTGTAGGAAATGTGAGTTCACCCTTGGAATTGACTGAGGAGGAATGGAACAATGTGTTTAAAACAAACATAAATGGTACATGGTTGGTGTCAAAATATGTATGCAAACTCATGCGTGATTCAAAGAGGAAAGGATCAATTATCAATATCTCTTCAATTGCTGGCCTAGAGAGGGGGCAATTGCCCGGTGGAACTGCATATGCTTGTTCAAAGGCAGGTGTCAATATGCTCACAAAGGTAATTAGTCTTCAAATCAATTTTATAAATTAGACAACCTATTTTCAATTTTATCTTTGTATTTTGAATTTGTTTTCATGTGACTTGGTGCAACCTGGAAAGTTATCGTCACATGATTGAAATGTCACGGGTTAAAGTTTTGGAAATAGTCTTGTGTAAAAAACTTTGTAAGGGTTATCAGAATAGAGAATGTGATAAATGGATAATTGCAAATTGAATGTTAAATTAAACATTAATCCAAGGTTCCTTGATTTTAGGATCATTAGGCACGTGTCAATTTGCATCAACCAATTCTGATATGACAAGTGTATTTCATATGCTATTTTGAATCATAACAAAAATATGGTAAAACTACGTGCAATACATCAAATGATGAGACTTTTTTCCATAATTTTTTTCAGACCGTATATATGCGGAAACTTTAGTGGTTGTTGCCCTTTATTCTAATACTACTACTCCCTCCAGTCACTATTATAAGCAAAAGTTGACTTTTTAGATTCATTCAATAAATGATGTATGTAGTCTATATATAGACCACATACATTATTTATTGAATGAACCTAAAAAATCAACTTTTGCTTATAATAATGATCGGATGAAGTATTTGTTTTCTTTGGATGCCTTTTTGTCTTATCAAGAAATTGGTAAAATCAAGAAGTTCACGGCCTTAATTCTTGTTGCCATGTGTGATGAATCAAGAAGTTCACGTTATATCCTTATTCTCTCTCTTCATTTATCCCGCTCTATTGTTTTGGACCAATAAAATAGAGAAAGTGAAAGTTGTCATCAAAGTTGTCATAAATAGTTGTACATATATCATTACTTCTTTTAATAAAGTTGTGAATATTCATCAATTAAAATAGGGTCTTGCTAACCAATGCCCTCAGGGCAATGGTTAAGAATTTAAAAATAGAAATAATTTATAAATTTTATGTAAAAAAGGTTACTTTTTAAACTTTCAATGTCTTGAATGCATCATTTCCAAGACAAAACTTCCTTTTTAAACTTCCTTTCAATGTCTTCAGGACAATGGTTAGTAGTATTTCCCATTAAAATAATGTGTCAGAACTTAAATAATTAAGCAAAGACATACTGACATTGGTTGGTATTTTTGTAATAAAAATTGACAGGTGATGGCATTGGAATTGGGGGCACACAAAATAAGAGTGAATTCAATATCACCAGGACTTTTCAAATCTGAAATTACTGAAAATTTGATGAAGAAAGATTGGCTAAACAATGTAGCCATGAGAACAGTGCCATTAAGAGAATGGGGCACTTCAAATCCAGCATTAACATCAATTGCTCGCTACTTAATTCATGATTCTTCTGAATATGTGACGGGAAATATATTTATTGCTGATGCTGGTGCTACCTTACCAGGCTTTCCTATTTATTCCTCACTATGA

Protein sequence

>MS.gene007678.t1

MAKQLEPWHDLAGKVVLVTGASAGIGRDFCLDLARAGCLVIAAARRVDRLQSLCDEINGKEGSLRAVAVELDVAADGGAIEKYVQKAWEAFGHIDVLINNAGVRGNVSSPLELTEEEWNNVFKTNINGTWLVSKYVCKLMRDSKRKGSIINISSIAGLERGQLPGGTAYACSKAGVNMLTKVMALELGAHKIRVNSISPGLFKSEITENLMKKDWLNNVAMRTVPLREWGTSNPALTSIARYLIHDSSEYVTGNIFIADAGATLPGFPIYSSL