Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08695.t1 | XP_013455993.1 | 91.2 | 273 | 24 | 0 | 1 | 273 | 1 | 273 | 1.10E-138 | 502.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08695.t1 | Q9X248 | 33.5 | 254 | 159 | 6 | 11 | 264 | 3 | 246 | 1.1e-30 | 135.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08695.t1 | A0A072UJU8 | 91.2 | 273 | 24 | 0 | 1 | 273 | 1 | 273 | 7.9e-139 | 502.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08695.t1 | MTR_4g058810 | 91.209 | 273 | 24 | 0 | 1 | 273 | 1 | 273 | 0.0 | 511 |
MS.gene08695.t1 | MTR_4g058840 | 91.575 | 273 | 23 | 0 | 1 | 273 | 1 | 273 | 0.0 | 510 |
MS.gene08695.t1 | MTR_4g058820 | 91.575 | 273 | 23 | 0 | 1 | 273 | 1 | 273 | 0.0 | 510 |
MS.gene08695.t1 | MTR_1g051165 | 70.803 | 274 | 75 | 1 | 5 | 273 | 8 | 281 | 1.21e-140 | 397 |
MS.gene08695.t1 | MTR_4g058830 | 86.740 | 181 | 23 | 1 | 93 | 273 | 40 | 219 | 5.06e-112 | 322 |
MS.gene08695.t1 | MTR_3g085740 | 31.923 | 260 | 167 | 7 | 6 | 264 | 70 | 320 | 1.02e-30 | 117 |
MS.gene08695.t1 | MTR_1g007800 | 30.739 | 257 | 174 | 3 | 14 | 267 | 6 | 261 | 1.25e-29 | 112 |
MS.gene08695.t1 | MTR_4g052320 | 30.916 | 262 | 172 | 5 | 4 | 264 | 1 | 254 | 9.59e-27 | 105 |
MS.gene08695.t1 | MTR_4g052300 | 29.851 | 268 | 166 | 7 | 4 | 264 | 1 | 253 | 4.25e-25 | 100 |
MS.gene08695.t1 | MTR_3g068085 | 28.958 | 259 | 173 | 7 | 11 | 267 | 15 | 264 | 8.77e-25 | 100 |
MS.gene08695.t1 | MTR_3g068070 | 29.502 | 261 | 171 | 9 | 10 | 267 | 14 | 264 | 1.32e-24 | 99.8 |
MS.gene08695.t1 | MTR_6g023590 | 26.744 | 258 | 172 | 6 | 11 | 261 | 13 | 260 | 6.25e-24 | 97.8 |
MS.gene08695.t1 | MTR_4g052350 | 31.008 | 258 | 162 | 7 | 11 | 264 | 14 | 259 | 7.13e-24 | 97.8 |
MS.gene08695.t1 | MTR_7g094520 | 28.030 | 264 | 181 | 7 | 1 | 261 | 1 | 258 | 1.18e-22 | 94.4 |
MS.gene08695.t1 | MTR_4g052340 | 29.412 | 255 | 170 | 6 | 11 | 264 | 14 | 259 | 1.39e-22 | 94.4 |
MS.gene08695.t1 | MTR_3g068155 | 28.736 | 261 | 173 | 9 | 10 | 267 | 18 | 268 | 2.20e-22 | 94.0 |
MS.gene08695.t1 | MTR_7g063330 | 28.906 | 256 | 172 | 6 | 11 | 263 | 15 | 263 | 1.27e-21 | 91.7 |
MS.gene08695.t1 | MTR_4g064883 | 28.077 | 260 | 174 | 9 | 11 | 267 | 14 | 263 | 1.62e-21 | 91.3 |
MS.gene08695.t1 | MTR_7g110130 | 28.030 | 264 | 166 | 5 | 11 | 264 | 6 | 255 | 2.26e-21 | 90.9 |
MS.gene08695.t1 | MTR_6g023610 | 28.627 | 255 | 155 | 8 | 11 | 253 | 13 | 252 | 2.64e-21 | 90.9 |
MS.gene08695.t1 | MTR_3g068175 | 30.651 | 261 | 168 | 11 | 10 | 267 | 16 | 266 | 3.79e-21 | 90.5 |
MS.gene08695.t1 | MTR_3g068065 | 28.462 | 260 | 173 | 10 | 11 | 267 | 17 | 266 | 6.12e-21 | 89.7 |
MS.gene08695.t1 | MTR_2g090165 | 28.517 | 263 | 165 | 5 | 11 | 264 | 6 | 254 | 6.77e-21 | 89.7 |
MS.gene08695.t1 | MTR_7g063320 | 28.295 | 258 | 174 | 6 | 11 | 264 | 15 | 265 | 1.16e-20 | 89.0 |
MS.gene08695.t1 | MTR_1g082760 | 27.068 | 266 | 182 | 6 | 6 | 266 | 35 | 293 | 1.72e-20 | 89.0 |
MS.gene08695.t1 | MTR_7g063390 | 28.846 | 260 | 170 | 8 | 11 | 264 | 16 | 266 | 3.88e-20 | 87.4 |
MS.gene08695.t1 | MTR_7g083870 | 29.008 | 262 | 168 | 7 | 11 | 263 | 35 | 287 | 7.00e-20 | 87.4 |
MS.gene08695.t1 | MTR_6g023950 | 27.027 | 259 | 170 | 7 | 11 | 261 | 13 | 260 | 7.97e-20 | 86.7 |
MS.gene08695.t1 | MTR_7g094510 | 29.151 | 271 | 164 | 13 | 1 | 261 | 1 | 253 | 9.32e-20 | 86.3 |
MS.gene08695.t1 | MTR_7g113650 | 24.254 | 268 | 183 | 6 | 6 | 264 | 35 | 291 | 3.04e-19 | 85.5 |
MS.gene08695.t1 | MTR_3g068175 | 30.189 | 265 | 168 | 12 | 10 | 267 | 16 | 270 | 4.96e-19 | 84.7 |
MS.gene08695.t1 | MTR_4g131740 | 27.820 | 266 | 171 | 11 | 7 | 262 | 36 | 290 | 7.38e-19 | 84.7 |
MS.gene08695.t1 | MTR_6g023910 | 27.843 | 255 | 157 | 9 | 11 | 253 | 13 | 252 | 1.47e-18 | 83.2 |
MS.gene08695.t1 | MTR_7g071680 | 28.364 | 275 | 166 | 9 | 11 | 263 | 29 | 294 | 2.57e-18 | 83.2 |
MS.gene08695.t1 | MTR_4g064887 | 26.459 | 257 | 182 | 5 | 11 | 267 | 15 | 264 | 5.47e-18 | 81.6 |
MS.gene08695.t1 | MTR_3g087850 | 31.443 | 194 | 118 | 7 | 15 | 206 | 30 | 210 | 9.48e-18 | 81.6 |
MS.gene08695.t1 | MTR_7g110140 | 28.125 | 256 | 175 | 4 | 11 | 264 | 6 | 254 | 1.30e-17 | 80.5 |
MS.gene08695.t1 | MTR_7g063360 | 28.295 | 258 | 174 | 8 | 11 | 264 | 16 | 266 | 2.99e-17 | 79.7 |
MS.gene08695.t1 | MTR_4g105310 | 27.969 | 261 | 158 | 7 | 17 | 256 | 52 | 303 | 4.06e-17 | 80.5 |
MS.gene08695.t1 | MTR_6g023990 | 24.903 | 257 | 178 | 6 | 11 | 261 | 14 | 261 | 4.74e-17 | 79.0 |
MS.gene08695.t1 | MTR_7g110160 | 26.236 | 263 | 153 | 5 | 11 | 264 | 6 | 236 | 6.58e-17 | 78.2 |
MS.gene08695.t1 | MTR_7g063260 | 25.969 | 258 | 178 | 7 | 11 | 263 | 16 | 265 | 8.72e-17 | 78.2 |
MS.gene08695.t1 | MTR_4g105310 | 30.144 | 209 | 123 | 5 | 17 | 206 | 52 | 256 | 1.21e-16 | 77.8 |
MS.gene08695.t1 | MTR_6g023600 | 24.898 | 245 | 175 | 5 | 11 | 252 | 13 | 251 | 1.27e-16 | 77.8 |
MS.gene08695.t1 | MTR_7g063270 | 26.070 | 257 | 178 | 7 | 11 | 263 | 16 | 264 | 2.47e-16 | 77.0 |
MS.gene08695.t1 | MTR_4g132850 | 25.769 | 260 | 179 | 7 | 5 | 262 | 1 | 248 | 2.73e-16 | 76.6 |
MS.gene08695.t1 | MTR_7g105590 | 30.366 | 191 | 124 | 5 | 11 | 200 | 8 | 190 | 3.46e-16 | 75.5 |
MS.gene08695.t1 | MTR_1196s0010 | 26.953 | 256 | 167 | 10 | 9 | 261 | 274 | 512 | 4.47e-16 | 78.2 |
MS.gene08695.t1 | MTR_3g087860 | 33.696 | 184 | 104 | 7 | 24 | 206 | 29 | 195 | 5.41e-16 | 76.3 |
MS.gene08695.t1 | MTR_3g020670 | 29.197 | 274 | 162 | 8 | 7 | 263 | 12 | 270 | 6.95e-16 | 75.9 |
MS.gene08695.t1 | MTR_7g080410 | 29.798 | 198 | 132 | 5 | 6 | 200 | 32 | 225 | 6.95e-16 | 76.6 |
MS.gene08695.t1 | MTR_7g080410 | 29.798 | 198 | 132 | 5 | 6 | 200 | 32 | 225 | 8.14e-16 | 76.3 |
MS.gene08695.t1 | MTR_6g035395 | 24.904 | 261 | 164 | 5 | 11 | 264 | 5 | 240 | 1.35e-15 | 74.7 |
MS.gene08695.t1 | MTR_8g442750 | 28.626 | 262 | 171 | 8 | 11 | 264 | 14 | 267 | 1.54e-15 | 75.5 |
MS.gene08695.t1 | MTR_7g105580 | 26.718 | 262 | 165 | 7 | 11 | 270 | 8 | 244 | 1.58e-15 | 74.7 |
MS.gene08695.t1 | MTR_8g096620 | 28.500 | 200 | 136 | 5 | 9 | 208 | 43 | 235 | 2.79e-15 | 75.1 |
MS.gene08695.t1 | MTR_3g077410 | 25.564 | 266 | 168 | 8 | 12 | 256 | 36 | 292 | 1.29e-14 | 73.2 |
MS.gene08695.t1 | MTR_4g097510 | 29.327 | 208 | 130 | 8 | 14 | 215 | 5 | 201 | 1.70e-14 | 72.0 |
MS.gene08695.t1 | MTR_4g078630 | 27.376 | 263 | 171 | 6 | 11 | 263 | 19 | 271 | 2.46e-14 | 71.6 |
MS.gene08695.t1 | MTR_6g088500 | 25.764 | 229 | 152 | 5 | 4 | 218 | 171 | 395 | 2.65e-14 | 72.8 |
MS.gene08695.t1 | MTR_3g086210 | 28.723 | 188 | 131 | 3 | 13 | 199 | 53 | 238 | 3.79e-14 | 71.6 |
MS.gene08695.t1 | MTR_6g088500 | 26.009 | 223 | 147 | 5 | 4 | 212 | 171 | 389 | 4.43e-14 | 72.0 |
MS.gene08695.t1 | MTR_8g044240 | 27.053 | 207 | 139 | 5 | 4 | 206 | 68 | 266 | 5.17e-13 | 68.6 |
MS.gene08695.t1 | MTR_7g107670 | 27.273 | 264 | 169 | 9 | 11 | 263 | 33 | 284 | 5.84e-13 | 67.8 |
MS.gene08695.t1 | MTR_1g068955 | 26.054 | 261 | 174 | 10 | 3 | 255 | 7 | 256 | 7.01e-13 | 67.4 |
MS.gene08695.t1 | MTR_7g105460 | 25.000 | 260 | 178 | 6 | 11 | 264 | 13 | 261 | 9.96e-13 | 67.0 |
MS.gene08695.t1 | MTR_4g064887 | 27.228 | 202 | 141 | 4 | 10 | 211 | 14 | 209 | 1.08e-12 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08695.t1 | AT3G55290 | 66.544 | 272 | 89 | 2 | 3 | 273 | 10 | 280 | 4.35e-136 | 385 |
MS.gene08695.t1 | AT3G55290 | 66.544 | 272 | 89 | 2 | 3 | 273 | 9 | 279 | 5.22e-136 | 385 |
MS.gene08695.t1 | AT3G55310 | 63.603 | 272 | 97 | 2 | 3 | 273 | 9 | 279 | 8.20e-131 | 372 |
MS.gene08695.t1 | AT3G46170 | 63.235 | 272 | 98 | 2 | 3 | 273 | 18 | 288 | 4.84e-129 | 368 |
MS.gene08695.t1 | AT1G63380 | 61.905 | 273 | 101 | 2 | 3 | 273 | 7 | 278 | 7.68e-128 | 364 |
MS.gene08695.t1 | AT1G63380 | 61.905 | 273 | 101 | 2 | 3 | 273 | 11 | 282 | 9.02e-128 | 364 |
MS.gene08695.t1 | AT1G63380 | 61.905 | 273 | 101 | 2 | 3 | 273 | 9 | 280 | 1.16e-127 | 364 |
MS.gene08695.t1 | AT1G63380 | 61.905 | 273 | 101 | 2 | 3 | 273 | 14 | 285 | 1.64e-127 | 364 |
MS.gene08695.t1 | AT1G62610 | 61.538 | 273 | 102 | 2 | 3 | 273 | 6 | 277 | 8.66e-127 | 362 |
MS.gene08695.t1 | AT1G62610 | 61.538 | 273 | 102 | 2 | 3 | 273 | 5 | 276 | 8.74e-127 | 362 |
MS.gene08695.t1 | AT1G62610 | 61.538 | 273 | 102 | 2 | 3 | 273 | 7 | 278 | 1.21e-126 | 361 |
MS.gene08695.t1 | AT1G62610 | 61.538 | 273 | 102 | 2 | 3 | 273 | 11 | 282 | 1.72e-126 | 361 |
MS.gene08695.t1 | AT2G17845 | 64.045 | 267 | 93 | 2 | 10 | 273 | 46 | 312 | 4.24e-125 | 358 |
MS.gene08695.t1 | AT3G01980 | 32.443 | 262 | 172 | 4 | 13 | 270 | 5 | 265 | 1.15e-41 | 144 |
MS.gene08695.t1 | AT3G01980 | 32.443 | 262 | 172 | 4 | 13 | 270 | 5 | 265 | 1.15e-41 | 144 |
MS.gene08695.t1 | AT3G01980 | 33.778 | 225 | 145 | 3 | 50 | 270 | 17 | 241 | 1.32e-37 | 133 |
MS.gene08695.t1 | AT3G01980 | 29.110 | 292 | 172 | 5 | 13 | 270 | 5 | 295 | 2.94e-35 | 128 |
MS.gene08695.t1 | AT5G06060 | 33.716 | 261 | 160 | 10 | 10 | 267 | 8 | 258 | 1.18e-29 | 113 |
MS.gene08695.t1 | AT1G24360 | 30.038 | 263 | 168 | 8 | 6 | 264 | 69 | 319 | 1.21e-27 | 108 |
MS.gene08695.t1 | AT3G01980 | 32.000 | 175 | 116 | 3 | 13 | 185 | 5 | 178 | 3.57e-25 | 99.0 |
MS.gene08695.t1 | AT3G26770 | 29.710 | 276 | 167 | 9 | 11 | 271 | 41 | 304 | 7.18e-24 | 98.6 |
MS.gene08695.t1 | AT2G29150 | 29.091 | 275 | 180 | 8 | 1 | 269 | 1 | 266 | 3.38e-23 | 95.9 |
MS.gene08695.t1 | AT3G51680 | 30.657 | 274 | 159 | 9 | 11 | 263 | 32 | 295 | 7.01e-23 | 95.9 |
MS.gene08695.t1 | AT2G29370 | 28.679 | 265 | 180 | 7 | 6 | 269 | 11 | 267 | 6.04e-22 | 92.4 |
MS.gene08695.t1 | AT2G29260 | 29.057 | 265 | 174 | 11 | 6 | 267 | 64 | 317 | 1.02e-21 | 92.8 |
MS.gene08695.t1 | AT4G13180 | 28.736 | 261 | 169 | 9 | 11 | 264 | 13 | 263 | 9.40e-21 | 89.4 |
MS.gene08695.t1 | AT1G54870 | 25.660 | 265 | 183 | 6 | 6 | 264 | 77 | 333 | 1.46e-20 | 89.7 |
MS.gene08695.t1 | AT1G54870 | 25.660 | 265 | 183 | 6 | 6 | 264 | 79 | 335 | 1.54e-20 | 89.7 |
MS.gene08695.t1 | AT5G18210 | 27.344 | 256 | 174 | 9 | 10 | 259 | 7 | 256 | 1.63e-20 | 88.6 |
MS.gene08695.t1 | AT3G26760 | 27.206 | 272 | 162 | 7 | 11 | 263 | 36 | 290 | 3.30e-20 | 88.6 |
MS.gene08695.t1 | AT3G03980 | 27.473 | 273 | 176 | 10 | 2 | 261 | 5 | 268 | 5.31e-20 | 87.4 |
MS.gene08695.t1 | AT5G10050 | 32.990 | 194 | 115 | 7 | 15 | 206 | 9 | 189 | 1.29e-19 | 86.3 |
MS.gene08695.t1 | AT2G29360 | 28.409 | 264 | 178 | 9 | 6 | 267 | 11 | 265 | 2.59e-19 | 85.5 |
MS.gene08695.t1 | AT2G29290 | 25.969 | 258 | 184 | 5 | 10 | 267 | 6 | 256 | 3.78e-19 | 84.7 |
MS.gene08695.t1 | AT5G65205 | 33.505 | 194 | 114 | 7 | 15 | 206 | 10 | 190 | 4.86e-19 | 85.1 |
MS.gene08695.t1 | AT2G29350 | 27.027 | 259 | 179 | 7 | 10 | 267 | 14 | 263 | 6.37e-19 | 84.3 |
MS.gene08695.t1 | AT2G30670 | 26.744 | 258 | 180 | 7 | 11 | 267 | 7 | 256 | 8.23e-19 | 84.0 |
MS.gene08695.t1 | AT1G52340 | 28.626 | 262 | 174 | 6 | 11 | 263 | 18 | 275 | 2.35e-18 | 83.2 |
MS.gene08695.t1 | AT1G67730 | 30.144 | 209 | 139 | 5 | 4 | 208 | 40 | 245 | 5.26e-18 | 82.4 |
MS.gene08695.t1 | AT1G07440 | 29.119 | 261 | 171 | 11 | 10 | 267 | 11 | 260 | 5.70e-18 | 81.6 |
MS.gene08695.t1 | AT3G05260 | 25.095 | 263 | 182 | 7 | 6 | 262 | 32 | 285 | 8.21e-18 | 81.6 |
MS.gene08695.t1 | AT3G47360 | 30.000 | 200 | 133 | 5 | 8 | 207 | 42 | 234 | 2.88e-17 | 80.5 |
MS.gene08695.t1 | AT5G18210 | 27.572 | 243 | 164 | 9 | 10 | 246 | 7 | 243 | 4.44e-17 | 79.3 |
MS.gene08695.t1 | AT3G47350 | 27.885 | 208 | 143 | 5 | 8 | 215 | 41 | 241 | 4.91e-17 | 79.7 |
MS.gene08695.t1 | AT3G47350 | 27.885 | 208 | 143 | 5 | 8 | 215 | 41 | 241 | 6.68e-17 | 79.3 |
MS.gene08695.t1 | AT2G29290 | 27.660 | 188 | 130 | 5 | 81 | 267 | 57 | 239 | 1.21e-15 | 74.7 |
MS.gene08695.t1 | AT3G04000 | 25.000 | 276 | 176 | 10 | 7 | 264 | 10 | 272 | 1.28e-15 | 75.1 |
MS.gene08695.t1 | AT2G47140 | 26.562 | 256 | 179 | 5 | 11 | 264 | 6 | 254 | 2.09e-15 | 74.3 |
MS.gene08695.t1 | AT1G24470 | 25.728 | 206 | 142 | 5 | 13 | 214 | 52 | 250 | 2.52e-15 | 75.1 |
MS.gene08695.t1 | AT1G10310 | 30.102 | 196 | 129 | 5 | 11 | 206 | 15 | 202 | 2.85e-15 | 73.9 |
MS.gene08695.t1 | AT2G29310 | 28.125 | 256 | 173 | 9 | 11 | 264 | 7 | 253 | 3.23e-15 | 73.9 |
MS.gene08695.t1 | AT2G47130 | 25.769 | 260 | 175 | 5 | 11 | 264 | 6 | 253 | 3.58e-15 | 73.9 |
MS.gene08695.t1 | AT1G07450 | 25.869 | 259 | 180 | 9 | 11 | 267 | 8 | 256 | 5.42e-15 | 73.2 |
MS.gene08695.t1 | AT2G47120 | 24.609 | 256 | 182 | 5 | 11 | 264 | 6 | 252 | 1.60e-14 | 72.0 |
MS.gene08695.t1 | AT2G47120 | 24.609 | 256 | 182 | 5 | 11 | 264 | 7 | 253 | 1.71e-14 | 72.0 |
MS.gene08695.t1 | AT2G29350 | 28.814 | 177 | 118 | 6 | 92 | 267 | 56 | 225 | 2.32e-14 | 70.9 |
MS.gene08695.t1 | AT3G42960 | 28.626 | 262 | 164 | 7 | 14 | 263 | 11 | 261 | 2.41e-14 | 71.6 |
MS.gene08695.t1 | AT2G29340 | 26.641 | 259 | 179 | 8 | 11 | 267 | 7 | 256 | 4.61e-14 | 70.9 |
MS.gene08695.t1 | AT5G50690 | 29.767 | 215 | 123 | 8 | 13 | 215 | 47 | 245 | 5.22e-14 | 70.9 |
MS.gene08695.t1 | AT5G50590 | 29.767 | 215 | 123 | 8 | 13 | 215 | 47 | 245 | 5.22e-14 | 70.9 |
MS.gene08695.t1 | AT5G61830 | 29.339 | 242 | 119 | 7 | 15 | 207 | 38 | 276 | 5.29e-14 | 71.2 |
MS.gene08695.t1 | AT5G61830 | 29.339 | 242 | 119 | 7 | 15 | 207 | 38 | 276 | 5.29e-14 | 71.2 |
MS.gene08695.t1 | AT2G29340 | 26.538 | 260 | 180 | 8 | 10 | 267 | 6 | 256 | 6.10e-14 | 70.9 |
MS.gene08695.t1 | AT5G50690 | 29.851 | 201 | 116 | 7 | 13 | 204 | 47 | 231 | 1.32e-13 | 69.3 |
MS.gene08695.t1 | AT5G50590 | 29.851 | 201 | 116 | 7 | 13 | 204 | 47 | 231 | 1.32e-13 | 69.3 |
MS.gene08695.t1 | AT3G29250 | 25.556 | 270 | 164 | 7 | 11 | 264 | 6 | 254 | 1.69e-13 | 68.9 |
MS.gene08695.t1 | AT2G29320 | 25.097 | 259 | 184 | 7 | 11 | 267 | 13 | 263 | 2.00e-13 | 68.9 |
MS.gene08695.t1 | AT5G50600 | 30.198 | 202 | 130 | 7 | 9 | 208 | 43 | 235 | 2.38e-13 | 69.7 |
MS.gene08695.t1 | AT5G50700 | 30.198 | 202 | 130 | 7 | 9 | 208 | 43 | 235 | 2.38e-13 | 69.7 |
MS.gene08695.t1 | AT3G29250 | 24.812 | 266 | 177 | 4 | 11 | 267 | 44 | 295 | 2.55e-13 | 68.9 |
MS.gene08695.t1 | AT3G29250 | 24.812 | 266 | 177 | 4 | 11 | 267 | 42 | 293 | 2.79e-13 | 68.9 |
MS.gene08695.t1 | AT3G29260 | 26.217 | 267 | 165 | 7 | 11 | 264 | 6 | 253 | 4.15e-13 | 67.8 |
MS.gene08695.t1 | AT5G04900 | 26.667 | 195 | 136 | 5 | 16 | 206 | 82 | 273 | 9.53e-13 | 67.8 |
MS.gene08695.t1 | AT3G03330 | 27.461 | 193 | 133 | 4 | 11 | 200 | 41 | 229 | 2.89e-12 | 66.2 |
MS.gene08695.t1 | AT2G29300 | 24.806 | 258 | 186 | 6 | 11 | 267 | 7 | 257 | 7.41e-12 | 64.3 |
MS.gene08695.t1 | AT2G29320 | 26.455 | 189 | 132 | 6 | 81 | 267 | 62 | 245 | 1.81e-11 | 63.2 |
MS.gene08695.t1 | AT2G29350 | 28.272 | 191 | 129 | 5 | 10 | 199 | 14 | 197 | 3.63e-11 | 62.0 |
MS.gene08695.t1 | AT2G29330 | 23.256 | 258 | 189 | 6 | 11 | 267 | 7 | 256 | 5.48e-11 | 62.0 |
MS.gene08695.t1 | AT2G29300 | 24.803 | 254 | 183 | 6 | 11 | 263 | 7 | 253 | 6.20e-11 | 62.0 |
MS.gene08695.t1 | AT3G47350 | 36.000 | 100 | 62 | 2 | 8 | 107 | 41 | 138 | 6.62e-11 | 61.6 |
Find 74 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCAATATCTCTTCAATTGC+TGG | 0.294772 | 4.2:-44639078 | MS.gene08695:CDS |
GTGTTTAAAACAAACATAAA+TGG | 0.315012 | 4.2:-44639165 | MS.gene08695:CDS |
TGAAGTGCCCCATTCTCTTA+AGG | 0.336024 | 4.2:+44637981 | None:intergenic |
ATTCATAGTGAGGAATAAAT+AGG | 0.336435 | 4.2:+44637853 | None:intergenic |
ACAGGTAATGGCATTGGAAA+TGG | 0.347927 | 4.2:-44638115 | MS.gene08695:intron |
CCGCGCCGTTGCGGTGGAGC+TGG | 0.359584 | 4.2:-44651141 | MS.gene08695:CDS |
GAAGTGCCCCATTCTCTTAA+GGG | 0.360752 | 4.2:+44637982 | None:intergenic |
GAACCATGGCACGACCTTGC+TGG | 0.373624 | 4.2:-44651317 | MS.gene08695:CDS |
GAGCTGGATGTGGCGGCTGA+TGG | 0.375015 | 4.2:-44651125 | MS.gene08695:CDS |
ATCAATAATGCTGGTGTTAG+AGG | 0.381617 | 4.2:-44651041 | MS.gene08695:intron |
TGCCTTGATCTCGCTCGTGC+TGG | 0.384037 | 4.2:-44651245 | MS.gene08695:CDS |
TCTTAAGGGTACTGTTCTCT+TGG | 0.392609 | 4.2:+44637996 | None:intergenic |
CTTGTCACCGGCGCATCAGC+TGG | 0.400375 | 4.2:-44651284 | MS.gene08695:CDS |
CAGGTAATGGCATTGGAAAT+GGG | 0.401207 | 4.2:-44638114 | MS.gene08695:CDS |
GATGCTGGTGTAACCTTGCC+AGG | 0.405617 | 4.2:-44637880 | MS.gene08695:CDS |
CAGGAAGCGTGGGAGGCGTT+TGG | 0.411689 | 4.2:-44651080 | MS.gene08695:CDS |
AACAGTACCCTTAAGAGAAT+GGG | 0.418260 | 4.2:-44637989 | MS.gene08695:CDS |
CGGGCAATTGTCCCCTCTCT+AGG | 0.426091 | 4.2:+44639055 | None:intergenic |
CTGGATGTGGCGGCTGATGG+TGG | 0.463685 | 4.2:-44651122 | MS.gene08695:CDS |
TTCTCTTTGAATCTCGGATG+AGG | 0.467152 | 4.2:+44639112 | None:intergenic |
GGAAAAGTTGTTCTTGTCAC+CGG | 0.475286 | 4.2:-44651296 | MS.gene08695:CDS |
ATTTGAGATTTGAAAAGTCC+TGG | 0.476294 | 4.2:+44638060 | None:intergenic |
GAACAGTACCCTTAAGAGAA+TGG | 0.491792 | 4.2:-44637990 | MS.gene08695:CDS |
ATCCGAGATTCAAAGAGAAA+AGG | 0.491904 | 4.2:-44639108 | MS.gene08695:CDS |
CGAGCAATTGATGTCAATGC+TGG | 0.507791 | 4.2:+44637955 | None:intergenic |
AAGTCTCCGCGCCGTTGCGG+TGG | 0.509353 | 4.2:-44651147 | MS.gene08695:CDS |
AGCTATAGAGAAGTATGTGC+AGG | 0.514751 | 4.2:-44651099 | MS.gene08695:CDS |
ATCCAGCACGAGCGAGATCA+AGG | 0.514926 | 4.2:+44651243 | None:intergenic |
GAGGAATAAATAGGCAAGCC+TGG | 0.517459 | 4.2:+44637862 | None:intergenic |
GCATATGCTTGTTCAAAGGC+AGG | 0.522186 | 4.2:-44639024 | MS.gene08695:CDS |
AATATATTTATTGCTGATGC+TGG | 0.523150 | 4.2:-44637895 | MS.gene08695:CDS |
GATTCTTCTGAATATGTGAC+AGG | 0.524490 | 4.2:-44637919 | MS.gene08695:CDS |
AGAAGTATGTGCAGGAAGCG+TGG | 0.524585 | 4.2:-44651091 | MS.gene08695:CDS |
TGGAATTGACTGAGGAGGAA+TGG | 0.528283 | 4.2:-44639194 | MS.gene08695:CDS |
CGTTGCGGTGGAGCTGGATG+TGG | 0.529368 | 4.2:-44651135 | MS.gene08695:CDS |
ACCGGCGCATCAGCTGGACT+CGG | 0.529467 | 4.2:-44651278 | MS.gene08695:CDS |
TTCAATTGCTGGCCTAGAGA+GGG | 0.532544 | 4.2:-44639067 | MS.gene08695:CDS |
GAAGTATGTGCAGGAAGCGT+GGG | 0.532922 | 4.2:-44651090 | MS.gene08695:CDS |
TAATTGACAGGTAATGGCAT+TGG | 0.550875 | 4.2:-44638121 | MS.gene08695:intron |
CTTCAATTGCTGGCCTAGAG+AGG | 0.552027 | 4.2:-44639068 | MS.gene08695:CDS |
AGGAAATGTGAGTTCACCCT+TGG | 0.553066 | 4.2:-44639214 | MS.gene08695:CDS |
AAACAAACATAAATGGTACA+TGG | 0.554543 | 4.2:-44639158 | MS.gene08695:CDS |
CTAGAGAGGGGACAATTGCC+CGG | 0.556034 | 4.2:-44639054 | MS.gene08695:CDS |
TTCCTCCTCAGTCAATTCCA+AGG | 0.561664 | 4.2:+44639197 | None:intergenic |
AGGTAATGGCATTGGAAATG+GGG | 0.563034 | 4.2:-44638113 | MS.gene08695:CDS |
CACATCCAGCTCCACCGCAA+CGG | 0.563747 | 4.2:+44651136 | None:intergenic |
GCCGAGTCCAGCTGATGCGC+CGG | 0.564718 | 4.2:+44651277 | None:intergenic |
CGAGATCAAGGCAGAAATCA+CGG | 0.576411 | 4.2:+44651255 | None:intergenic |
GATGAAATCAATGGAAAGGA+GGG | 0.578092 | 4.2:-44651170 | MS.gene08695:CDS |
GGGAAGTCTCCGCGCCGTTG+CGG | 0.588745 | 4.2:-44651150 | MS.gene08695:CDS |
AATTGCATATGCTTGTTCAA+AGG | 0.589192 | 4.2:-44639028 | MS.gene08695:CDS |
CAAGCATATGCAATTCCACC+GGG | 0.595751 | 4.2:+44639036 | None:intergenic |
ATAAATAGGCAAGCCTGGCA+AGG | 0.598824 | 4.2:+44637867 | None:intergenic |
TTTCCAGCAAGGTCGTGCCA+TGG | 0.602055 | 4.2:+44651314 | None:intergenic |
TCCTCCTCAGTCAATTCCAA+GGG | 0.607693 | 4.2:+44639198 | None:intergenic |
CATATCAAGTATTCATAGTG+AGG | 0.608610 | 4.2:+44637843 | None:intergenic |
TCATTGTGTGATGAAATCAA+TGG | 0.614754 | 4.2:-44651179 | MS.gene08695:CDS |
TGGCAAAGCTACTAGAACCA+TGG | 0.617483 | 4.2:-44651331 | MS.gene08695:CDS |
ACCCTTGGAATTGACTGAGG+AGG | 0.618106 | 4.2:-44639199 | MS.gene08695:CDS |
TGCGGTGGAGCTGGATGTGG+CGG | 0.618447 | 4.2:-44651132 | MS.gene08695:CDS |
TGATGAAATCAATGGAAAGG+AGG | 0.620320 | 4.2:-44651171 | MS.gene08695:CDS |
GTATGTGCAGGAAGCGTGGG+AGG | 0.621150 | 4.2:-44651087 | MS.gene08695:CDS |
ACAAGCATATGCAATTCCAC+CGG | 0.630032 | 4.2:+44639035 | None:intergenic |
GATGCGTTGATCAATAATGC+TGG | 0.633929 | 4.2:-44651050 | MS.gene08695:CDS |
TCAATTGCTGGCCTAGAGAG+GGG | 0.637165 | 4.2:-44639066 | MS.gene08695:CDS |
TGCTGGATGTCGTGTGATCG+TGG | 0.638563 | 4.2:-44651228 | MS.gene08695:CDS |
AGGTGTCAATATGCTAACAA+AGG | 0.644536 | 4.2:-44639004 | MS.gene08695:intron |
GTGTGATGAAATCAATGGAA+AGG | 0.648715 | 4.2:-44651174 | MS.gene08695:CDS |
CCAGCTCCACCGCAACGGCG+CGG | 0.649379 | 4.2:+44651141 | None:intergenic |
TTCACCCTTGGAATTGACTG+AGG | 0.656324 | 4.2:-44639202 | MS.gene08695:CDS |
AGAGTGAATTCAATATCACC+AGG | 0.658398 | 4.2:-44638078 | MS.gene08695:CDS |
ACAGTACCCTTAAGAGAATG+GGG | 0.676856 | 4.2:-44637988 | MS.gene08695:CDS |
GGTAATGGCATTGGAAATGG+GGG | 0.681681 | 4.2:-44638112 | MS.gene08695:CDS |
GAGAGGGGACAATTGCCCGG+TGG | 0.736062 | 4.2:-44639051 | MS.gene08695:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 44637855 | 44651354 | 44637855 | ID=MS.gene08695 |
chr4.2 | mRNA | 44637855 | 44651354 | 44637855 | ID=MS.gene08695.t1;Parent=MS.gene08695 |
chr4.2 | exon | 44651042 | 44651354 | 44651042 | ID=MS.gene08695.t1.exon1;Parent=MS.gene08695.t1 |
chr4.2 | CDS | 44651042 | 44651354 | 44651042 | ID=cds.MS.gene08695.t1;Parent=MS.gene08695.t1 |
chr4.2 | exon | 44639005 | 44639234 | 44639005 | ID=MS.gene08695.t1.exon2;Parent=MS.gene08695.t1 |
chr4.2 | CDS | 44639005 | 44639234 | 44639005 | ID=cds.MS.gene08695.t1;Parent=MS.gene08695.t1 |
chr4.2 | exon | 44637855 | 44638133 | 44637855 | ID=MS.gene08695.t1.exon3;Parent=MS.gene08695.t1 |
chr4.2 | CDS | 44637855 | 44638133 | 44637855 | ID=cds.MS.gene08695.t1;Parent=MS.gene08695.t1 |
Gene Sequence |
Protein sequence |