AlfalfaGEDB | MS.gene050131

M. sativa cultivar XinJiangDaYe / MS.gene050131

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016491
PFAM: PF00106.28

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050131.t1	XP_013455994.1	96.3	273	10	0	1	273	1	273	1.90E-146	528.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050131.t1	Q9X248	35.8	254	153	6	11	264	3	246	8.2e-34	145.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050131.t1	I3T7Z9	96.3	273	10	0	1	273	1	273	1.3e-146	528.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene050131	MS.gene008160	PPI
MS.gene050131	MS.gene024269	PPI
MS.gene050131	MS.gene003729	PPI
MS.gene050431	MS.gene050131	PPI
MS.gene050131	MS.gene43481	PPI
MS.gene043387	MS.gene050131	PPI
MS.gene003925	MS.gene050131	PPI
MS.gene25667	MS.gene050131	PPI
MS.gene62193	MS.gene050131	PPI
MS.gene85724	MS.gene050131	PPI
MS.gene41122	MS.gene050131	PPI
MS.gene050131	MS.gene07097	PPI
MS.gene073684	MS.gene050131	PPI
MS.gene63308	MS.gene050131	PPI
MS.gene80360	MS.gene050131	PPI
MS.gene033685	MS.gene050131	PPI
MS.gene050131	MS.gene95020	PPI
MS.gene008153	MS.gene050131	PPI
MS.gene042142	MS.gene050131	PPI
MS.gene23019	MS.gene050131	PPI
MS.gene014425	MS.gene050131	PPI
MS.gene63482	MS.gene050131	PPI
MS.gene012794	MS.gene050131	PPI
MS.gene007002	MS.gene050131	PPI
MS.gene018066	MS.gene050131	PPI
MS.gene28848	MS.gene050131	PPI
MS.gene87026	MS.gene050131	PPI
MS.gene050131	MS.gene50524	PPI
MS.gene070761	MS.gene050131	PPI
MS.gene68956	MS.gene050131	PPI
MS.gene63307	MS.gene050131	PPI
MS.gene070760	MS.gene050131	PPI
MS.gene056339	MS.gene050131	PPI
MS.gene07096	MS.gene050131	PPI
MS.gene03319	MS.gene050131	PPI
MS.gene050131	MS.gene04700	PPI
MS.gene050131	MS.gene31507	PPI
MS.gene54952	MS.gene050131	PPI
MS.gene62195	MS.gene050131	PPI
MS.gene050131	MS.gene059170	PPI
MS.gene050131	MS.gene08695	PPI
MS.gene43514	MS.gene050131	PPI
MS.gene050432	MS.gene050131	PPI
MS.gene54548	MS.gene050131	PPI
MS.gene059170	MS.gene050131	PPI
MS.gene42260	MS.gene050131	PPI
MS.gene08694	MS.gene050131	PPI
MS.gene25674	MS.gene050131	PPI
MS.gene003926	MS.gene050131	PPI
MS.gene52742	MS.gene050131	PPI
MS.gene007006	MS.gene050131	PPI
MS.gene072664	MS.gene050131	PPI
MS.gene006731	MS.gene050131	PPI
MS.gene50522	MS.gene050131	PPI
MS.gene28847	MS.gene050131	PPI
MS.gene62194	MS.gene050131	PPI
MS.gene007678	MS.gene050131	PPI
MS.gene87780	MS.gene050131	PPI
MS.gene045436	MS.gene050131	PPI
MS.gene63484	MS.gene050131	PPI
MS.gene012681	MS.gene050131	PPI
MS.gene54598	MS.gene050131	PPI
MS.gene050131	MS.gene03319	PPI
MS.gene008162	MS.gene050131	PPI
MS.gene028938	MS.gene050131	PPI
MS.gene050131	MS.gene68880	PPI
MS.gene015282	MS.gene050131	PPI
MS.gene070758	MS.gene050131	PPI
MS.gene065380	MS.gene050131	PPI
MS.gene09624	MS.gene050131	PPI
MS.gene064756	MS.gene050131	PPI
MS.gene42856	MS.gene050131	PPI
MS.gene050131	MS.gene08756	PPI
MS.gene050131	MS.gene42114	PPI
MS.gene63403	MS.gene050131	PPI
MS.gene019786	MS.gene050131	PPI
MS.gene52743	MS.gene050131	PPI
MS.gene008161	MS.gene050131	PPI
MS.gene021442	MS.gene050131	PPI
MS.gene050131	MS.gene028938	PPI
MS.gene050131	MS.gene003992	PPI
MS.gene050131	MS.gene30551	PPI
MS.gene63306	MS.gene050131	PPI
MS.gene62187	MS.gene050131	PPI
MS.gene63300	MS.gene050131	PPI
MS.gene050131	MS.gene055846	PPI
MS.gene024269	MS.gene050131	PPI
MS.gene31648	MS.gene050131	PPI
MS.gene006999	MS.gene050131	PPI
MS.gene021164	MS.gene050131	PPI
MS.gene63483	MS.gene050131	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050131.t1	MTR_4g058840	96.337	273	10	0	1	273	1	273	0.0	539
MS.gene050131.t1	MTR_4g058820	96.337	273	10	0	1	273	1	273	0.0	539
MS.gene050131.t1	MTR_4g058810	94.872	273	14	0	1	273	1	273	0.0	532
MS.gene050131.t1	MTR_1g051165	71.273	275	74	1	4	273	7	281	2.35e-142	401
MS.gene050131.t1	MTR_4g058830	90.608	181	16	1	93	273	40	219	3.80e-117	335
MS.gene050131.t1	MTR_3g085740	32.308	260	166	6	6	264	70	320	3.48e-32	120
MS.gene050131.t1	MTR_1g007800	30.556	252	173	2	14	264	6	256	3.10e-29	112
MS.gene050131.t1	MTR_3g068085	30.769	260	167	9	11	267	15	264	1.78e-28	110
MS.gene050131.t1	MTR_4g052300	31.522	276	163	8	5	270	2	261	2.71e-28	109
MS.gene050131.t1	MTR_4g052320	31.599	269	173	6	5	270	2	262	3.23e-28	109
MS.gene050131.t1	MTR_3g068070	30.268	261	169	9	10	267	14	264	3.34e-27	106
MS.gene050131.t1	MTR_4g052350	32.700	263	165	7	11	270	14	267	4.66e-27	106
MS.gene050131.t1	MTR_4g052340	30.418	263	171	7	11	270	14	267	2.67e-26	104
MS.gene050131.t1	MTR_3g068065	30.385	260	168	10	11	267	17	266	5.16e-26	103
MS.gene050131.t1	MTR_3g068155	29.119	261	172	9	10	267	18	268	1.14e-24	100
MS.gene050131.t1	MTR_6g023590	27.132	258	171	6	11	261	13	260	1.81e-24	99.4
MS.gene050131.t1	MTR_3g068175	31.034	261	167	11	10	267	16	266	1.07e-23	97.4
MS.gene050131.t1	MTR_7g063330	29.297	256	171	6	11	263	15	263	2.37e-23	96.3
MS.gene050131.t1	MTR_7g110130	29.520	271	147	8	11	261	6	252	2.69e-23	96.3
MS.gene050131.t1	MTR_2g090165	29.670	273	164	6	1	264	1	254	2.87e-23	95.9
MS.gene050131.t1	MTR_4g064883	28.846	260	172	9	11	267	14	263	7.42e-23	95.1
MS.gene050131.t1	MTR_6g023610	29.020	255	154	8	11	253	13	252	1.24e-22	94.4
MS.gene050131.t1	MTR_7g110140	31.783	258	157	7	11	261	6	251	1.33e-22	94.4
MS.gene050131.t1	MTR_7g063320	28.682	258	173	6	11	264	15	265	3.45e-22	93.2
MS.gene050131.t1	MTR_1g082760	27.881	269	176	6	6	266	35	293	6.94e-22	92.8
MS.gene050131.t1	MTR_3g068175	30.566	265	167	12	10	267	16	270	1.40e-21	91.7
MS.gene050131.t1	MTR_6g023950	26.641	259	171	6	11	261	13	260	2.23e-21	90.9
MS.gene050131.t1	MTR_7g094520	28.409	264	180	7	1	261	1	258	6.54e-21	89.7
MS.gene050131.t1	MTR_7g063390	29.344	259	170	8	11	264	16	266	2.18e-20	88.2
MS.gene050131.t1	MTR_7g094510	29.545	264	162	11	7	261	5	253	2.43e-20	87.8
MS.gene050131.t1	MTR_3g087850	34.021	194	113	7	15	206	30	210	2.46e-20	88.6
MS.gene050131.t1	MTR_7g083870	29.389	262	167	7	11	263	35	287	2.89e-20	88.6
MS.gene050131.t1	MTR_4g064887	27.165	254	178	5	11	264	15	261	3.19e-20	87.8
MS.gene050131.t1	MTR_6g035395	27.132	258	156	5	11	261	5	237	3.33e-20	87.4
MS.gene050131.t1	MTR_4g131740	29.259	270	160	11	7	261	36	289	1.67e-19	86.3
MS.gene050131.t1	MTR_6g023910	26.800	250	166	7	11	253	13	252	5.87e-19	84.3
MS.gene050131.t1	MTR_7g063360	29.070	258	172	8	11	264	16	266	6.11e-19	84.3
MS.gene050131.t1	MTR_7g071680	29.455	275	163	8	11	263	29	294	6.63e-19	84.7
MS.gene050131.t1	MTR_7g105590	32.461	191	120	5	11	200	8	190	1.14e-18	82.0
MS.gene050131.t1	MTR_7g113650	24.354	271	179	7	6	264	35	291	1.48e-18	83.6
MS.gene050131.t1	MTR_1196s0010	29.688	256	160	11	9	261	274	512	1.50e-18	85.5
MS.gene050131.t1	MTR_7g105580	30.038	263	151	8	1	261	4	235	2.89e-18	82.4
MS.gene050131.t1	MTR_7g110160	27.473	273	152	6	1	264	1	236	2.97e-18	82.0
MS.gene050131.t1	MTR_7g063260	26.459	257	178	6	11	263	16	265	3.07e-18	82.4
MS.gene050131.t1	MTR_7g063270	26.070	257	178	7	11	263	16	264	8.51e-18	81.3
MS.gene050131.t1	MTR_4g078630	29.412	272	171	7	2	263	11	271	1.50e-17	80.9
MS.gene050131.t1	MTR_3g087860	35.429	175	99	6	33	206	34	195	1.77e-17	80.5
MS.gene050131.t1	MTR_3g020670	29.927	274	160	8	7	263	12	270	2.38e-17	80.1
MS.gene050131.t1	MTR_6g023990	25.292	257	177	6	11	261	14	261	4.56e-17	79.0
MS.gene050131.t1	MTR_7g107670	28.736	261	169	8	11	263	33	284	5.22e-17	79.3
MS.gene050131.t1	MTR_6g023600	25.197	254	181	5	11	261	13	260	6.19e-17	78.6
MS.gene050131.t1	MTR_4g132850	28.517	263	166	9	5	261	1	247	6.20e-17	78.6
MS.gene050131.t1	MTR_4g105310	30.622	209	122	6	17	206	52	256	1.12e-16	78.2
MS.gene050131.t1	MTR_8g442750	28.958	259	168	8	11	261	14	264	1.98e-16	77.8
MS.gene050131.t1	MTR_4g105310	27.969	261	158	8	17	256	52	303	2.02e-16	78.2
MS.gene050131.t1	MTR_7g080410	31.034	203	132	6	1	200	28	225	2.17e-16	77.8
MS.gene050131.t1	MTR_8g044240	29.744	195	131	4	16	206	74	266	2.57e-16	78.2
MS.gene050131.t1	MTR_7g080410	31.034	203	132	6	1	200	28	225	2.71e-16	77.4
MS.gene050131.t1	MTR_3g086210	30.526	190	125	4	13	199	53	238	3.54e-16	77.4
MS.gene050131.t1	MTR_7g105460	27.106	273	170	9	11	270	13	269	1.36e-15	75.1
MS.gene050131.t1	MTR_4g097510	29.952	207	130	7	14	215	5	201	1.36e-15	75.1
MS.gene050131.t1	MTR_6g088500	25.463	216	146	4	5	206	172	386	5.04e-15	75.1
MS.gene050131.t1	MTR_4g064887	28.934	197	134	4	10	206	14	204	5.29e-15	72.8
MS.gene050131.t1	MTR_6g088500	25.463	216	146	4	5	206	172	386	6.87e-15	74.3
MS.gene050131.t1	MTR_8g096620	28.500	200	136	5	9	208	43	235	8.92e-15	73.6
MS.gene050131.t1	MTR_8g089575	27.461	193	127	4	13	199	47	232	1.12e-14	73.2
MS.gene050131.t1	MTR_3g077410	27.570	214	132	5	12	206	36	245	5.81e-14	71.2
MS.gene050131.t1	MTR_6g023600	24.803	254	176	6	11	261	13	254	3.85e-13	68.2
MS.gene050131.t1	MTR_4g134660	28.788	198	133	6	11	206	6	197	1.52e-12	65.9
MS.gene050131.t1	MTR_4g086400	27.536	207	131	7	12	206	5	204	1.93e-12	67.4
MS.gene050131.t1	MTR_8g096580	26.639	244	158	9	2	241	36	262	3.62e-12	65.9
MS.gene050131.t1	MTR_7g099850	25.000	276	179	8	2	257	23	290	4.42e-12	65.5
MS.gene050131.t1	MTR_4g086410	29.327	208	126	8	12	206	5	204	6.20e-12	65.9
MS.gene050131.t1	MTR_1g068955	26.562	256	175	9	5	255	9	256	9.38e-12	64.3
MS.gene050131.t1	MTR_3g086190	28.500	200	136	5	13	208	46	242	1.79e-11	63.9
MS.gene050131.t1	MTR_7g105570	30.208	192	116	7	89	270	43	226	9.61e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050131.t1	AT3G55290	67.647	272	86	2	3	273	10	280	9.38e-137	387
MS.gene050131.t1	AT3G55290	67.647	272	86	2	3	273	9	279	1.47e-136	386
MS.gene050131.t1	AT3G55310	65.441	272	92	2	3	273	9	279	5.70e-133	377
MS.gene050131.t1	AT3G46170	65.441	272	92	2	3	273	18	288	2.75e-132	376
MS.gene050131.t1	AT1G62610	64.469	273	94	2	3	273	6	277	3.71e-131	373
MS.gene050131.t1	AT1G62610	64.469	273	94	2	3	273	5	276	3.96e-131	372
MS.gene050131.t1	AT1G62610	64.469	273	94	2	3	273	7	278	4.53e-131	372
MS.gene050131.t1	AT1G63380	64.103	273	95	2	3	273	7	278	4.60e-131	372
MS.gene050131.t1	AT1G63380	64.103	273	95	2	3	273	11	282	6.04e-131	372
MS.gene050131.t1	AT1G62610	64.469	273	94	2	3	273	11	282	6.21e-131	372
MS.gene050131.t1	AT1G63380	64.103	273	95	2	3	273	9	280	6.85e-131	372
MS.gene050131.t1	AT1G63380	64.103	273	95	2	3	273	14	285	8.25e-131	372
MS.gene050131.t1	AT2G17845	65.918	267	88	2	10	273	46	312	1.79e-127	365
MS.gene050131.t1	AT3G01980	32.677	254	168	3	13	264	5	257	1.39e-41	144
MS.gene050131.t1	AT3G01980	32.677	254	168	3	13	264	5	257	1.39e-41	144
MS.gene050131.t1	AT3G01980	34.101	217	141	2	50	264	17	233	3.23e-38	134
MS.gene050131.t1	AT3G01980	29.225	284	168	4	13	264	5	287	3.26e-35	128
MS.gene050131.t1	AT5G06060	33.716	261	160	9	10	267	8	258	6.90e-31	116
MS.gene050131.t1	AT1G24360	30.769	260	164	8	6	261	69	316	6.82e-29	112
MS.gene050131.t1	AT3G01980	32.571	175	115	3	13	185	5	178	6.55e-26	100
MS.gene050131.t1	AT2G29150	29.455	275	179	8	1	269	1	266	7.67e-25	100
MS.gene050131.t1	AT3G51680	31.022	274	158	8	11	263	32	295	1.67e-24	100
MS.gene050131.t1	AT3G26770	30.072	276	166	9	11	271	41	304	8.90e-24	98.2
MS.gene050131.t1	AT2G29260	29.811	265	172	11	6	267	64	317	1.23e-23	98.2
MS.gene050131.t1	AT5G18210	29.688	256	168	9	10	259	7	256	2.32e-23	96.3
MS.gene050131.t1	AT2G29370	28.727	275	182	8	1	269	1	267	4.70e-23	95.5
MS.gene050131.t1	AT2G29350	28.185	259	176	7	10	267	14	263	1.78e-22	94.0
MS.gene050131.t1	AT4G13180	30.588	255	166	8	11	261	13	260	3.87e-22	92.8
MS.gene050131.t1	AT5G65205	36.082	194	109	7	15	206	10	190	1.85e-21	91.7
MS.gene050131.t1	AT3G26760	28.030	264	170	5	11	263	36	290	2.14e-21	91.7
MS.gene050131.t1	AT1G07440	28.253	269	178	10	2	267	4	260	2.79e-21	90.9
MS.gene050131.t1	AT1G54870	27.509	269	173	8	6	264	79	335	3.35e-21	91.7
MS.gene050131.t1	AT1G54870	27.509	269	173	8	6	264	77	333	3.72e-21	91.7
MS.gene050131.t1	AT2G29360	29.197	274	178	10	1	267	1	265	6.01e-21	89.7
MS.gene050131.t1	AT5G10050	34.536	194	112	7	15	206	9	189	7.96e-21	89.7
MS.gene050131.t1	AT2G29290	26.357	258	183	5	10	267	6	256	1.29e-20	89.0
MS.gene050131.t1	AT5G18210	30.041	243	158	9	10	246	7	243	7.40e-20	87.0
MS.gene050131.t1	AT3G03980	28.253	269	171	10	6	261	9	268	1.03e-19	86.7
MS.gene050131.t1	AT1G52340	29.167	264	170	6	11	263	18	275	1.30e-19	86.7
MS.gene050131.t1	AT2G30670	26.744	258	180	7	11	267	7	256	2.96e-19	85.1
MS.gene050131.t1	AT1G67730	31.579	209	134	5	5	208	41	245	4.40e-19	85.5
MS.gene050131.t1	AT3G47360	31.000	200	131	5	8	207	42	234	6.78e-19	85.1
MS.gene050131.t1	AT2G29310	28.517	263	169	10	11	267	7	256	4.43e-18	82.0
MS.gene050131.t1	AT1G10310	30.612	196	128	5	11	206	15	202	5.09e-18	81.3
MS.gene050131.t1	AT1G49670	31.280	211	124	7	13	210	6	208	7.76e-18	83.6
MS.gene050131.t1	AT1G49670	31.401	207	121	7	17	210	10	208	8.64e-18	83.2
MS.gene050131.t1	AT2G47140	28.517	263	165	7	11	264	6	254	1.08e-17	80.9
MS.gene050131.t1	AT3G47350	28.365	208	142	5	8	215	41	241	1.74e-17	80.9
MS.gene050131.t1	AT3G47350	28.365	208	142	5	8	215	41	241	1.86e-17	80.9
MS.gene050131.t1	AT2G29350	29.379	177	117	6	92	267	56	225	4.89e-17	78.6
MS.gene050131.t1	AT2G47130	27.308	260	171	5	11	264	6	253	4.92e-17	79.0
MS.gene050131.t1	AT1G24470	27.749	191	127	5	13	199	52	235	5.54e-17	79.7
MS.gene050131.t1	AT3G05260	25.660	265	176	8	6	261	32	284	8.00e-17	79.0
MS.gene050131.t1	AT2G29290	27.660	188	130	5	81	267	57	239	9.08e-17	77.8
MS.gene050131.t1	AT3G42960	31.461	267	150	9	14	263	11	261	9.14e-17	78.6
MS.gene050131.t1	AT2G47120	26.070	257	177	6	11	264	6	252	1.73e-16	77.4
MS.gene050131.t1	AT2G47120	26.070	257	177	6	11	264	7	253	1.75e-16	77.4
MS.gene050131.t1	AT5G50690	31.336	217	133	9	13	223	47	253	3.78e-16	77.0
MS.gene050131.t1	AT5G50590	31.336	217	133	9	13	223	47	253	3.78e-16	77.0
MS.gene050131.t1	AT5G50690	31.795	195	120	7	13	204	47	231	4.40e-16	76.3
MS.gene050131.t1	AT5G50590	31.795	195	120	7	13	204	47	231	4.40e-16	76.3
MS.gene050131.t1	AT5G50600	32.178	202	126	7	9	208	43	235	4.86e-16	77.4
MS.gene050131.t1	AT5G50700	32.178	202	126	7	9	208	43	235	4.86e-16	77.4
MS.gene050131.t1	AT1G07450	26.154	260	178	9	11	267	8	256	9.10e-16	75.5
MS.gene050131.t1	AT5G61830	30.579	242	116	7	15	207	38	276	1.51e-15	75.5
MS.gene050131.t1	AT5G61830	30.579	242	116	7	15	207	38	276	1.51e-15	75.5
MS.gene050131.t1	AT2G29340	26.255	259	180	8	11	267	7	256	1.52e-15	74.7
MS.gene050131.t1	AT2G29340	26.255	259	180	8	11	267	7	256	2.39e-15	75.1
MS.gene050131.t1	AT3G29260	27.692	260	170	6	11	264	6	253	3.36e-15	73.9
MS.gene050131.t1	AT2G29320	26.923	260	178	9	11	267	13	263	3.70e-15	73.9
MS.gene050131.t1	AT3G29250	26.894	264	168	5	11	264	42	290	1.06e-14	72.8
MS.gene050131.t1	AT3G29250	27.985	268	154	7	11	261	6	251	1.17e-14	72.4
MS.gene050131.t1	AT3G29250	26.894	264	168	5	11	264	44	292	1.28e-14	72.8
MS.gene050131.t1	AT5G04900	28.205	195	133	5	16	206	82	273	1.54e-14	73.2
MS.gene050131.t1	AT3G04000	24.265	272	183	9	7	264	10	272	2.73e-14	71.6
MS.gene050131.t1	AT2G29350	27.805	205	140	5	10	213	14	211	1.59e-13	68.6
MS.gene050131.t1	AT2G29330	24.615	260	183	8	11	267	7	256	3.92e-13	68.2
MS.gene050131.t1	AT3G03330	28.646	192	132	3	11	200	41	229	7.30e-13	68.2
MS.gene050131.t1	AT2G29310	30.435	207	126	9	11	211	7	201	2.05e-12	65.1
MS.gene050131.t1	AT2G29300	24.419	258	187	6	11	267	7	257	2.93e-12	65.5
MS.gene050131.t1	AT2G37540	25.940	266	170	8	10	256	30	287	4.51e-12	65.5
MS.gene050131.t1	AT5G50130	25.837	209	132	5	17	206	7	211	7.13e-12	64.7
MS.gene050131.t1	AT5G50130	25.837	209	132	5	17	206	7	211	1.18e-11	64.3
MS.gene050131.t1	AT5G50130	25.714	210	132	6	17	206	7	212	3.36e-11	62.8
MS.gene050131.t1	AT5G50130	25.714	210	132	6	17	206	7	212	5.46e-11	62.4

Find 78 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAGTGCCCCATTCTCTTAA+TGG	0.197409	4.1:+39468915	None:intergenic
CAGAAGGCGTGGGAGGCTTT+TGG	0.275675	4.1:-39471961	MS.gene050131:CDS
ATCAATATCTCTTCAATTGC+TGG	0.294772	4.1:-39470307	MS.gene050131:CDS
ACAGGTGATGGCATTGGAAT+TGG	0.295752	4.1:-39469048	MS.gene050131:intron
CAGGTGATGGCATTGGAATT+GGG	0.298175	4.1:-39469047	MS.gene050131:CDS
GTGTTTAAAACAAACATAAA+TGG	0.315012	4.1:-39470394	MS.gene050131:CDS
ATTCATAGTGAGGAATAAAT+AGG	0.326565	4.1:+39468786	None:intergenic
ACGTGATTTCTGCCTTGATC+TGG	0.366903	4.1:-39472136	MS.gene050131:CDS
GCAGAAATCACGTCCGATTC+CGG	0.367971	4.1:+39472146	None:intergenic
AAAATTTGATGAAGAAAGAT+TGG	0.382710	4.1:-39468965	MS.gene050131:CDS
TGCCTTGATCTGGCTCGTGC+TGG	0.384037	4.1:-39472126	MS.gene050131:CDS
ATCAATAATGCCGGTGTTAG+AGG	0.395800	4.1:-39471922	MS.gene050131:intron
GGTGACAAGGACAACTTTGC+CGG	0.399560	4.1:+39472179	None:intergenic
AACAGTGCCATTAAGAGAAT+GGG	0.402159	4.1:-39468922	MS.gene050131:CDS
GATGCTGGTGCTACCTTACC+AGG	0.410122	4.1:-39468813	MS.gene050131:CDS
GAGCTTGATGTGGCGGCTGA+TGG	0.434808	4.1:-39472006	MS.gene050131:CDS
CTTGTCACCGGCGCATCAGC+CGG	0.455292	4.1:-39472165	MS.gene050131:CDS
CGAGCAATTGATGTTAATGC+TGG	0.468893	4.1:+39468888	None:intergenic
ATTTCAGATTTGAAAAGTCC+TGG	0.476294	4.1:+39468993	None:intergenic
ACCGGCGCATCAGCCGGAAT+CGG	0.477929	4.1:-39472159	MS.gene050131:CDS
TCCGATTCCGGCTGATGCGC+CGG	0.478445	4.1:+39472158	None:intergenic
TTCAATTGCTGGCCTAGAGA+GGG	0.482491	4.1:-39470296	MS.gene050131:CDS
TCTTAATGGCACTGTTCTCA+TGG	0.487179	4.1:+39468929	None:intergenic
GAACAGTGCCATTAAGAGAA+TGG	0.491704	4.1:-39468923	MS.gene050131:CDS
CTTGATGTGGCGGCTGATGG+TGG	0.496263	4.1:-39472003	MS.gene050131:CDS
AATATATTTATTGCTGATGC+TGG	0.507646	4.1:-39468828	MS.gene050131:CDS
GGCAAAGTTGTCCTTGTCAC+CGG	0.508416	4.1:-39472177	MS.gene050131:CDS
AGAAGTATGTGCAGAAGGCG+TGG	0.508562	4.1:-39471972	MS.gene050131:CDS
GAGGAATAAATAGGAAAGCC+TGG	0.518416	4.1:+39468795	None:intergenic
AGGTGATGGCATTGGAATTG+GGG	0.527360	4.1:-39469046	MS.gene050131:CDS
TGGAATTGACTGAGGAGGAA+TGG	0.528283	4.1:-39470423	MS.gene050131:CDS
CGGCTGATGCGCCGGTGACA+AGG	0.537649	4.1:+39472166	None:intergenic
CTTCAATTGCTGGCCTAGAG+AGG	0.544592	4.1:-39470297	MS.gene050131:CDS
GCATATGCTTGTTCAAAGGC+AGG	0.550266	4.1:-39470253	MS.gene050131:CDS
AAGTCTCCGTGCAGTTGCGG+TGG	0.551617	4.1:-39472028	MS.gene050131:CDS
AAACAAACATAAATGGTACA+TGG	0.552103	4.1:-39470387	MS.gene050131:CDS
AGGAAATGTGAGTTCACCCT+TGG	0.553066	4.1:-39470443	MS.gene050131:CDS
GATTCTTCTGAATATGTGAC+GGG	0.553262	4.1:-39468852	MS.gene050131:CDS
ATAAATAGGAAAGCCTGGTA+AGG	0.560891	4.1:+39468800	None:intergenic
TTCCTCCTCAGTCAATTCCA+AGG	0.561664	4.1:+39470426	None:intergenic
AAACATAAATGGTACATGGT+TGG	0.562444	4.1:-39470383	MS.gene050131:CDS
ATTCAAATTACCTCTAACAC+CGG	0.563895	4.1:+39471912	None:intergenic
TGATTCTTCTGAATATGTGA+CGG	0.567873	4.1:-39468853	MS.gene050131:CDS
CAAGCATATGCAGTTCCACC+GGG	0.568839	4.1:+39470265	None:intergenic
TATAGAGAAGTATGTGCAGA+AGG	0.570186	4.1:-39471977	MS.gene050131:CDS
GAAGTATGTGCAGAAGGCGT+GGG	0.571173	4.1:-39471971	MS.gene050131:CDS
ATCCAGCACGAGCCAGATCA+AGG	0.572658	4.1:+39472124	None:intergenic
GAACCATGGCACGACCTCGC+CGG	0.574081	4.1:-39472198	MS.gene050131:CDS
GATGAAATCAATGGAAAGGA+GGG	0.578092	4.1:-39472051	MS.gene050131:CDS
TTGCCGGCGAGGTCGTGCCA+TGG	0.580382	4.1:+39472195	None:intergenic
GGGAAGTCTCCGTGCAGTTG+CGG	0.586746	4.1:-39472031	MS.gene050131:CDS
TGCGGTGGAGCTTGATGTGG+CGG	0.592898	4.1:-39472013	MS.gene050131:CDS
AACTCATGCGTGATTCAAAG+AGG	0.594350	4.1:-39470342	MS.gene050131:CDS
CAAGGACAACTTTGCCGGCG+AGG	0.595256	4.1:+39472184	None:intergenic
AAATTGACAGGTGATGGCAT+TGG	0.597713	4.1:-39469054	MS.gene050131:intron
ACAAGCATATGCAGTTCCAC+CGG	0.601410	4.1:+39470264	None:intergenic
TCCTCCTCAGTCAATTCCAA+GGG	0.607693	4.1:+39470427	None:intergenic
CATATCAAGTATTCATAGTG+AGG	0.608610	4.1:+39468776	None:intergenic
TGGCAAAGCAACTAGAACCA+TGG	0.609409	4.1:-39472212	MS.gene050131:CDS
TCAATTGCTGGCCTAGAGAG+GGG	0.613681	4.1:-39470295	MS.gene050131:CDS
AACTGCATATGCTTGTTCAA+AGG	0.614285	4.1:-39470257	MS.gene050131:CDS
TCATTGTGTGATGAAATCAA+TGG	0.617419	4.1:-39472060	MS.gene050131:CDS
CAATTGCTGGCCTAGAGAGG+GGG	0.617473	4.1:-39470294	MS.gene050131:CDS
ACCCTTGGAATTGACTGAGG+AGG	0.618106	4.1:-39470428	MS.gene050131:CDS
TGATGAAATCAATGGAAAGG+AGG	0.620320	4.1:-39472052	MS.gene050131:CDS
ATGCGTGATTCAAAGAGGAA+AGG	0.620679	4.1:-39470337	MS.gene050131:CDS
GTATGTGCAGAAGGCGTGGG+AGG	0.631713	4.1:-39471968	MS.gene050131:CDS
CAAGCTCCACCGCAACTGCA+CGG	0.638345	4.1:+39472022	None:intergenic
AGTTGCGGTGGAGCTTGATG+TGG	0.644706	4.1:-39472016	MS.gene050131:CDS
GTGTGATGAAATCAATGGAA+AGG	0.648715	4.1:-39472055	MS.gene050131:CDS
AGAGTGAATTCAATATCACC+AGG	0.649340	4.1:-39469011	MS.gene050131:CDS
TGCTGGATGTCTTGTAATCG+CGG	0.655281	4.1:-39472109	MS.gene050131:CDS
TTCACCCTTGGAATTGACTG+AGG	0.656324	4.1:-39470431	MS.gene050131:CDS
GATGTGTTGATCAATAATGC+CGG	0.669788	4.1:-39471931	MS.gene050131:CDS
ACAGTGCCATTAAGAGAATG+GGG	0.679803	4.1:-39468921	MS.gene050131:CDS
AGGTGTCAATATGCTCACAA+AGG	0.699533	4.1:-39470233	MS.gene050131:intron
GGTGATGGCATTGGAATTGG+GGG	0.700914	4.1:-39469045	MS.gene050131:CDS
TGGATGTCTTGTAATCGCGG+CGG	0.804868	4.1:-39472106	MS.gene050131:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTATAATTTTTTAAAATATA+AGG	-	chr4.1:39470342-39470361	MS.gene050131:CDS	0.0%
!!	AATATTCATCAATTAAAATA+GGG	-	chr4.1:39471669-39471688	MS.gene050131:intron	10.0%
!!	CTTCAAAAAAAAAAAAAATA+TGG	-	chr4.1:39471150-39471169	MS.gene050131:intron	10.0%
!!!	AAAACTAATACTATTTTTTA+AGG	+	chr4.1:39469728-39469747	None:intergenic	10.0%
!!!	ATTATAGTAGTATATATTTT+TGG	+	chr4.1:39470124-39470143	None:intergenic	10.0%
!!	ACAAAGATAAAATTGAAAAT+AGG	+	chr4.1:39470830-39470849	None:intergenic	15.0%
!!	AGTCTAATACTTATAATATA+AGG	+	chr4.1:39469882-39469901	None:intergenic	15.0%
!!	GAATATTCATCAATTAAAAT+AGG	-	chr4.1:39471668-39471687	MS.gene050131:intron	15.0%
!!	GTCTAATACTTATAATATAA+GGG	+	chr4.1:39469881-39469900	None:intergenic	15.0%
!!	TGTATGAAAAAAATATTGTA+AGG	-	chr4.1:39470200-39470219	MS.gene050131:intron	15.0%
!!	TTAAATTAAACATTAATCCA+AGG	-	chr4.1:39471010-39471029	MS.gene050131:intron	15.0%
!!	TTTGAATCATAACAAAAATA+TGG	-	chr4.1:39471113-39471132	MS.gene050131:intron	15.0%
!!!	TTAATAATTTTAAGTGTATG+TGG	+	chr4.1:39470500-39470519	None:intergenic	15.0%
!!!	TTTTTGTAATAAAAATTGAC+AGG	-	chr4.1:39471935-39471954	MS.gene050131:CDS	15.0%
!!	AAAATTTGATGAAGAAAGAT+TGG	-	chr4.1:39472036-39472055	MS.gene050131:CDS	20.0%
!!	AATTTCTTGATAAGACAAAA+AGG	+	chr4.1:39471450-39471469	None:intergenic	20.0%
!!	AGTAGTAGTATTAGAATAAA+GGG	+	chr4.1:39471264-39471283	None:intergenic	20.0%
!!	CATTCAATAAATAATGTATG+TGG	+	chr4.1:39471364-39471383	None:intergenic	20.0%
!!	TAGCATGTATATTTACAAAA+AGG	-	chr4.1:39469921-39469940	MS.gene050131:intron	20.0%
!!	TTGTGTAAAAAACTTTGTAA+GGG	-	chr4.1:39470941-39470960	MS.gene050131:intron	20.0%
!!!	AAGGTATTAAAGTGAAATAT+TGG	+	chr4.1:39469709-39469728	None:intergenic	20.0%
!!!	ATATTTTCAAGTTACCAAAA+TGG	-	chr4.1:39469989-39470008	MS.gene050131:intron	20.0%
!!!	ATTTTAAACATTAGACACTT+TGG	-	chr4.1:39469823-39469842	MS.gene050131:intron	20.0%
!!!	CTTTTGCTTATAATAATGAT+CGG	-	chr4.1:39471399-39471418	MS.gene050131:intron	20.0%
!!!	GTGTTTAAAACAAACATAAA+TGG	-	chr4.1:39470607-39470626	MS.gene050131:intron	20.0%
!!!	TAAGCAAAAGTTGATTTTTT+AGG	+	chr4.1:39471389-39471408	None:intergenic	20.0%
!!!	TTCTGACACATTATTTTAAT+GGG	+	chr4.1:39471875-39471894	None:intergenic	20.0%
!!!	TTTCACTTTCTCTATTTTAT+TGG	+	chr4.1:39471586-39471605	None:intergenic	20.0%
!!!	TTTTGGTAACTTGAAAATAT+TGG	+	chr4.1:39469989-39470008	None:intergenic	20.0%
!!!	TTTTTGTCTTATCAAGAAAT+TGG	-	chr4.1:39471449-39471468	MS.gene050131:intron	20.0%
!	AAACAAACATAAATGGTACA+TGG	-	chr4.1:39470614-39470633	MS.gene050131:intron	25.0%
!	AATATATTTATTGCTGATGC+TGG	-	chr4.1:39472173-39472192	MS.gene050131:CDS	25.0%
!	AGAATAGAGAATGTGATAAA+TGG	-	chr4.1:39470969-39470988	MS.gene050131:intron	25.0%
!	ATAAATGAAGAGAGAGAATA+AGG	+	chr4.1:39471544-39471563	None:intergenic	25.0%
!	ATACGGTCTGAAAAAAATTA+TGG	+	chr4.1:39471215-39471234	None:intergenic	25.0%
!	ATATACATGCTAGTAACTTA+AGG	+	chr4.1:39469913-39469932	None:intergenic	25.0%
!	ATGATTTATTGTTTGTGTGA+AGG	-	chr4.1:39469465-39469484	MS.gene050131:intron	25.0%
!	CATTGAAAGGAAGTTTAAAA+AGG	+	chr4.1:39471825-39471844	None:intergenic	25.0%
!	CTTGTGTAAAAAACTTTGTA+AGG	-	chr4.1:39470940-39470959	MS.gene050131:intron	25.0%
!	GAGTAGTAGTATTAGAATAA+AGG	+	chr4.1:39471265-39471284	None:intergenic	25.0%
!	GCTGAAACATATAATTATAC+CGG	-	chr4.1:39469175-39469194	MS.gene050131:intron	25.0%
!	TAATAAAAATTGACAGGTGA+TGG	-	chr4.1:39471941-39471960	MS.gene050131:CDS	25.0%
!	TATACATGCTAGTAACTTAA+GGG	+	chr4.1:39469912-39469931	None:intergenic	25.0%
!	TTCGAGAAAATCATATAATC+CGG	+	chr4.1:39469197-39469216	None:intergenic	25.0%
!!!	GATGAAGTATTTGTTTTCTT+TGG	-	chr4.1:39471421-39471440	MS.gene050131:intron	25.0%
!!!	GTTCTGACACATTATTTTAA+TGG	+	chr4.1:39471876-39471895	None:intergenic	25.0%
!!!	TTAAAAAGGAAGTTTTGTCT+TGG	+	chr4.1:39471811-39471830	None:intergenic	25.0%
!!!	TTGATTCAAAAAGTTGATGA+TGG	-	chr4.1:39469413-39469432	MS.gene050131:intron	25.0%
	AAACATAAATGGTACATGGT+TGG	-	chr4.1:39470618-39470637	MS.gene050131:intron	30.0%
	AGCATAAAATATGTCGAGAA+AGG	+	chr4.1:39470454-39470473	None:intergenic	30.0%
	ATCAATATCTCTTCAATTGC+TGG	-	chr4.1:39470694-39470713	MS.gene050131:intron	30.0%
	ATTCAAATTACCTCTAACAC+CGG	+	chr4.1:39469092-39469111	None:intergenic	30.0%
	ATTTCAGATTTGAAAAGTCC+TGG	+	chr4.1:39472011-39472030	None:intergenic	30.0%
	CTAAAGTTTCCGCATATATA+CGG	+	chr4.1:39471232-39471251	None:intergenic	30.0%
	GATTTATTGTTGTGTTGTGT+AGG	-	chr4.1:39470538-39470557	MS.gene050131:intron	30.0%
	GTCTAACATTTACAACTTGA+TGG	-	chr4.1:39469952-39469971	MS.gene050131:intron	30.0%
	TACAACTTGATGGAACTAAA+GGG	-	chr4.1:39469962-39469981	MS.gene050131:intron	30.0%
	TACACTTGTCATATCAGAAT+TGG	+	chr4.1:39471080-39471099	None:intergenic	30.0%
	TATATATGCGGAAACTTTAG+TGG	-	chr4.1:39471232-39471251	MS.gene050131:intron	30.0%
	TCATTGTGTGATGAAATCAA+TGG	-	chr4.1:39468941-39468960	MS.gene050131:CDS	30.0%
	TGATTCTTCTGAATATGTGA+CGG	-	chr4.1:39472148-39472167	MS.gene050131:CDS	30.0%
	TGGTAAAATCAAGAAGTTCA+CGG	-	chr4.1:39471469-39471488	MS.gene050131:intron	30.0%
	TTACAACTTGATGGAACTAA+AGG	-	chr4.1:39469961-39469980	MS.gene050131:intron	30.0%
!	ATCGTTCTTTATTTGAGATG+TGG	-	chr4.1:39469489-39469508	MS.gene050131:intron	30.0%
!	CTTTTGCTTATAATAGTGAC+TGG	+	chr4.1:39471291-39471310	None:intergenic	30.0%
!	TCTCGACATATTTTATGCTT+TGG	-	chr4.1:39470455-39470474	MS.gene050131:intron	30.0%
!!	AAGTGCTTTTGATTCCATTT+TGG	+	chr4.1:39470006-39470025	None:intergenic	30.0%
!!	AATGGAATCAAAAGCACTTA+TGG	-	chr4.1:39470007-39470026	MS.gene050131:intron	30.0%
!!	ATGGAATCAAAAGCACTTAT+GGG	-	chr4.1:39470008-39470027	MS.gene050131:intron	30.0%
!!	GAATTTGTTTTCATGTGACT+TGG	-	chr4.1:39470855-39470874	MS.gene050131:intron	30.0%
!!	TTTTAAGTGTATGTGGTCAA+AGG	+	chr4.1:39470493-39470512	None:intergenic	30.0%
!!	TTTTTCAGACCGTATATATG+CGG	-	chr4.1:39471220-39471239	MS.gene050131:intron	30.0%
!!!	TCCTTGATTTTAGGATCATT+AGG	-	chr4.1:39471034-39471053	MS.gene050131:intron	30.0%
	AAAGACATACTGACATTGGT+TGG	-	chr4.1:39471910-39471929	MS.gene050131:intron	35.0%
	AACTGCATATGCTTGTTCAA+AGG	-	chr4.1:39470744-39470763	MS.gene050131:intron	35.0%
	AACTTCCTTTCAATGTCTTC+AGG	-	chr4.1:39471830-39471849	MS.gene050131:intron	35.0%
	AAGCAAAGACATACTGACAT+TGG	-	chr4.1:39471906-39471925	MS.gene050131:intron	35.0%
	AAGCGGTGCAATATTGAAAA+GGG	-	chr4.1:39469516-39469535	MS.gene050131:intron	35.0%
	ACACATGGCAACAAGAATTA+AGG	+	chr4.1:39471495-39471514	None:intergenic	35.0%
	ACTCAGAGATCAAAGTGAAA+CGG	-	chr4.1:39470053-39470072	MS.gene050131:intron	35.0%
	ACTTCTTGATTCATCACACA+TGG	+	chr4.1:39471510-39471529	None:intergenic	35.0%
	AGAGTGAATTCAATATCACC+AGG	-	chr4.1:39471990-39472009	MS.gene050131:CDS	35.0%
	ATAAATAGGAAAGCCTGGTA+AGG	+	chr4.1:39472204-39472223	None:intergenic	35.0%
	ATCCTAAAATCAAGGAACCT+TGG	+	chr4.1:39471030-39471049	None:intergenic	35.0%
	ATTGGTCCAAAACAATAGAG+CGG	+	chr4.1:39471568-39471587	None:intergenic	35.0%
	ATTGTCCTGAAGACATTGAA+AGG	+	chr4.1:39471838-39471857	None:intergenic	35.0%
	ATTGTGATTCCTTACGCTAT+CGG	-	chr4.1:39469748-39469767	MS.gene050131:intron	35.0%
	CACTTGGATGATATAGCTTA+TGG	+	chr4.1:39470389-39470408	None:intergenic	35.0%
	GATAGATATTAGACACGACA+TGG	+	chr4.1:39469282-39469301	None:intergenic	35.0%
	GATGAAATCAATGGAAAGGA+GGG	-	chr4.1:39468950-39468969	MS.gene050131:CDS	35.0%
	GATTCTTCTGAATATGTGAC+GGG	-	chr4.1:39472149-39472168	MS.gene050131:CDS	35.0%
	GCCTAATGATCCTAAAATCA+AGG	+	chr4.1:39471038-39471057	None:intergenic	35.0%
	GTCACATGATTGAAATGTCA+CGG	-	chr4.1:39470897-39470916	MS.gene050131:intron	35.0%
	GTGTGATGAAATCAATGGAA+AGG	-	chr4.1:39468946-39468965	MS.gene050131:CDS	35.0%
	TACAGATATTAGACACGACA+TGG	+	chr4.1:39469247-39469266	None:intergenic	35.0%
	TCACATGATTGAAATGTCAC+GGG	-	chr4.1:39470898-39470917	MS.gene050131:intron	35.0%
	TGATGAAATCAATGGAAAGG+AGG	-	chr4.1:39468949-39468968	MS.gene050131:CDS	35.0%
	TGCTTATAATAGTGACTGGA+GGG	+	chr4.1:39471287-39471306	None:intergenic	35.0%
	TTGCTTATAATAGTGACTGG+AGG	+	chr4.1:39471288-39471307	None:intergenic	35.0%
	TTGGATGATATAGCTTATGG+TGG	+	chr4.1:39470386-39470405	None:intergenic	35.0%
	TTTCAATGTCTTCAGGACAA+TGG	-	chr4.1:39471837-39471856	MS.gene050131:intron	35.0%
!	AACAGTGCCATTAAGAGAAT+GGG	-	chr4.1:39472079-39472098	MS.gene050131:CDS	35.0%
!	AGCACTTTTCTTCGAATGAT+TGG	-	chr4.1:39470146-39470165	MS.gene050131:intron	35.0%
!	ATCCAAGGTTCCTTGATTTT+AGG	-	chr4.1:39471025-39471044	MS.gene050131:intron	35.0%
!	ATTAGTCACTTTCAGTCACT+TGG	+	chr4.1:39470405-39470424	None:intergenic	35.0%
!	GAGTTTTGCTACATATGTAG+CGG	+	chr4.1:39469651-39469670	None:intergenic	35.0%
!	GATGTGTTGATCAATAATGC+CGG	-	chr4.1:39469070-39469089	MS.gene050131:intron	35.0%
!	TATAGAGAAGTATGTGCAGA+AGG	-	chr4.1:39469024-39469043	MS.gene050131:CDS	35.0%
!	TTTATCCCGCTCTATTGTTT+TGG	-	chr4.1:39471559-39471578	MS.gene050131:intron	35.0%
!!	AATGTCACGGGTTAAAGTTT+TGG	-	chr4.1:39470910-39470929	MS.gene050131:intron	35.0%
	AACTCATGCGTGATTCAAAG+AGG	-	chr4.1:39470659-39470678	MS.gene050131:intron	40.0%
	AATTCTTAACCATTGCCCTG+AGG	+	chr4.1:39471711-39471730	None:intergenic	40.0%
	AGGTGTCAATATGCTCACAA+AGG	-	chr4.1:39470768-39470787	MS.gene050131:intron	40.0%
	ATGCGTGATTCAAAGAGGAA+AGG	-	chr4.1:39470664-39470683	MS.gene050131:intron	40.0%
	ATTCTTAACCATTGCCCTGA+GGG	+	chr4.1:39471710-39471729	None:intergenic	40.0%
	CAAGCGGTGCAATATTGAAA+AGG	-	chr4.1:39469515-39469534	MS.gene050131:intron	40.0%
	CGAGCAATTGATGTTAATGC+TGG	+	chr4.1:39472116-39472135	None:intergenic	40.0%
	GAGGAATAAATAGGAAAGCC+TGG	+	chr4.1:39472209-39472228	None:intergenic	40.0%
	TCATGTGACGATAACTTTCC+AGG	+	chr4.1:39470886-39470905	None:intergenic	40.0%
	TCTTAATGGCACTGTTCTCA+TGG	+	chr4.1:39472075-39472094	None:intergenic	40.0%
	TTGGTCCAAAACAATAGAGC+GGG	+	chr4.1:39471567-39471586	None:intergenic	40.0%
!	AAATTGACAGGTGATGGCAT+TGG	-	chr4.1:39471947-39471966	MS.gene050131:CDS	40.0%
!	ACAGTGCCATTAAGAGAATG+GGG	-	chr4.1:39472080-39472099	MS.gene050131:CDS	40.0%
!	ATCAATAATGCCGGTGTTAG+AGG	-	chr4.1:39469079-39469098	MS.gene050131:intron	40.0%
!	ATTTGAGATGTGGTACCAAG+CGG	-	chr4.1:39469499-39469518	MS.gene050131:intron	40.0%
!	CTTTTCAATATTGCACCGCT+TGG	+	chr4.1:39469517-39469536	None:intergenic	40.0%
!	GAACAGTGCCATTAAGAGAA+TGG	-	chr4.1:39472078-39472097	MS.gene050131:CDS	40.0%
!!	CGTCTAATCTAAAGAGTGTC+TGG	+	chr4.1:39469132-39469151	None:intergenic	40.0%
!!	CTATCGGTGTTGAACACTTT+GGG	-	chr4.1:39469764-39469783	MS.gene050131:intron	40.0%
	ACAAGCATATGCAGTTCCAC+CGG	+	chr4.1:39470740-39470759	None:intergenic	45.0%
	ACGTGATTTCTGCCTTGATC+TGG	-	chr4.1:39468865-39468884	MS.gene050131:CDS	45.0%
	AGGAAATGTGAGTTCACCCT+TGG	-	chr4.1:39470558-39470577	MS.gene050131:intron	45.0%
	GCATATGCTTGTTCAAAGGC+AGG	-	chr4.1:39470748-39470767	MS.gene050131:intron	45.0%
	TCCTCCTCAGTCAATTCCAA+GGG	+	chr4.1:39470577-39470596	None:intergenic	45.0%
	TGCTGGATGTCTTGTAATCG+CGG	-	chr4.1:39468892-39468911	MS.gene050131:CDS	45.0%
	TGGAATTGACTGAGGAGGAA+TGG	-	chr4.1:39470578-39470597	MS.gene050131:intron	45.0%
	TGGCAAAGCAACTAGAACCA+TGG	-	chr4.1:39468789-39468808	MS.gene050131:CDS	45.0%
	TGTTCAACACCGATAGCGTA+AGG	+	chr4.1:39469760-39469779	None:intergenic	45.0%
	TTCACCCTTGGAATTGACTG+AGG	-	chr4.1:39470570-39470589	MS.gene050131:intron	45.0%
	TTCCTCCTCAGTCAATTCCA+AGG	+	chr4.1:39470578-39470597	None:intergenic	45.0%
!	ACAGGTGATGGCATTGGAAT+TGG	-	chr4.1:39471953-39471972	MS.gene050131:CDS	45.0%
!	AGGTGATGGCATTGGAATTG+GGG	-	chr4.1:39471955-39471974	MS.gene050131:CDS	45.0%
!	CAGGTGATGGCATTGGAATT+GGG	-	chr4.1:39471954-39471973	MS.gene050131:CDS	45.0%
!	GAAGTGCCCCATTCTCTTAA+TGG	+	chr4.1:39472089-39472108	None:intergenic	45.0%
!	TTCAATTGCTGGCCTAGAGA+GGG	-	chr4.1:39470705-39470724	MS.gene050131:intron	45.0%
!!	GCTATCGGTGTTGAACACTT+TGG	-	chr4.1:39469763-39469782	MS.gene050131:intron	45.0%
!!!	TTATAAATTTTATGTAAAAA+AGG	-	chr4.1:39471747-39471766	MS.gene050131:intron	5.0%
	ACCCTTGGAATTGACTGAGG+AGG	-	chr4.1:39470573-39470592	MS.gene050131:intron	50.0%
	CAAGCATATGCAGTTCCACC+GGG	+	chr4.1:39470739-39470758	None:intergenic	50.0%
	CTTGCTAACCAATGCCCTCA+GGG	-	chr4.1:39471693-39471712	MS.gene050131:intron	50.0%
	GCAGAAATCACGTCCGATTC+CGG	+	chr4.1:39468858-39468877	None:intergenic	50.0%
	GGCAAAGTTGTCCTTGTCAC+CGG	-	chr4.1:39468824-39468843	MS.gene050131:CDS	50.0%
	GGTGACAAGGACAACTTTGC+CGG	+	chr4.1:39468825-39468844	None:intergenic	50.0%
	TCTTGCTAACCAATGCCCTC+AGG	-	chr4.1:39471692-39471711	MS.gene050131:intron	50.0%
	TGGATGTCTTGTAATCGCGG+CGG	-	chr4.1:39468895-39468914	MS.gene050131:CDS	50.0%
!	AGAAGTATGTGCAGAAGGCG+TGG	-	chr4.1:39469029-39469048	MS.gene050131:CDS	50.0%
!	CTTCAATTGCTGGCCTAGAG+AGG	-	chr4.1:39470704-39470723	MS.gene050131:intron	50.0%
!	GAAGTATGTGCAGAAGGCGT+GGG	-	chr4.1:39469030-39469049	MS.gene050131:CDS	50.0%
!	GGTGATGGCATTGGAATTGG+GGG	-	chr4.1:39471956-39471975	MS.gene050131:CDS	50.0%
!	TCAATTGCTGGCCTAGAGAG+GGG	-	chr4.1:39470706-39470725	MS.gene050131:intron	50.0%
!	TGTTTCAGCGAGTGTCGTGT+TGG	+	chr4.1:39469164-39469183	None:intergenic	50.0%
!!	TCATGTGACTTGGTGCAACC+TGG	-	chr4.1:39470865-39470884	MS.gene050131:intron	50.0%
	AACCAATGCCCTCAGGGCAA+TGG	-	chr4.1:39471699-39471718	MS.gene050131:intron	55.0%
	AGTTGCGGTGGAGCTTGATG+TGG	-	chr4.1:39468985-39469004	MS.gene050131:CDS	55.0%
	ATCCAGCACGAGCCAGATCA+AGG	+	chr4.1:39468880-39468899	None:intergenic	55.0%
!	AACCATTGCCCTGAGGGCAT+TGG	+	chr4.1:39471704-39471723	None:intergenic	55.0%
!	CAATTGCTGGCCTAGAGAGG+GGG	-	chr4.1:39470707-39470726	MS.gene050131:intron	55.0%
!!	GATGCTGGTGCTACCTTACC+AGG	-	chr4.1:39472188-39472207	MS.gene050131:CDS	55.0%
	AAGTCTCCGTGCAGTTGCGG+TGG	-	chr4.1:39468973-39468992	MS.gene050131:CDS	60.0%
	CAAGCTCCACCGCAACTGCA+CGG	+	chr4.1:39468982-39469001	None:intergenic	60.0%
	CAAGGACAACTTTGCCGGCG+AGG	+	chr4.1:39468820-39468839	None:intergenic	60.0%
	CTAGAGAGGGGGCAATTGCC+CGG	-	chr4.1:39470718-39470737	MS.gene050131:intron	60.0%
	CTTGATGTGGCGGCTGATGG+TGG	-	chr4.1:39468998-39469017	MS.gene050131:CDS	60.0%
	GAGCTTGATGTGGCGGCTGA+TGG	-	chr4.1:39468995-39469014	MS.gene050131:CDS	60.0%
	GGGAAGTCTCCGTGCAGTTG+CGG	-	chr4.1:39468970-39468989	MS.gene050131:CDS	60.0%
	TGCGGTGGAGCTTGATGTGG+CGG	-	chr4.1:39468988-39469007	MS.gene050131:CDS	60.0%
!	GTATGTGCAGAAGGCGTGGG+AGG	-	chr4.1:39469033-39469052	MS.gene050131:CDS	60.0%
!	TGCCTTGATCTGGCTCGTGC+TGG	-	chr4.1:39468875-39468894	MS.gene050131:CDS	60.0%
!!	CAGAAGGCGTGGGAGGCTTT+TGG	-	chr4.1:39469040-39469059	MS.gene050131:CDS	60.0%
	ACCGGCGCATCAGCCGGAAT+CGG	-	chr4.1:39468842-39468861	MS.gene050131:CDS	65.0%
	CGGGCAATTGCCCCCTCTCT+AGG	+	chr4.1:39470720-39470739	None:intergenic	65.0%
	CTTGTCACCGGCGCATCAGC+CGG	-	chr4.1:39468836-39468855	MS.gene050131:CDS	65.0%
	GAACCATGGCACGACCTCGC+CGG	-	chr4.1:39468803-39468822	MS.gene050131:CDS	65.0%
	TCCGATTCCGGCTGATGCGC+CGG	+	chr4.1:39468846-39468865	None:intergenic	65.0%
	GAGAGGGGGCAATTGCCCGG+TGG	-	chr4.1:39470721-39470740	MS.gene050131:intron	70.0%
	TTGCCGGCGAGGTCGTGCCA+TGG	+	chr4.1:39468809-39468828	None:intergenic	70.0%
!	CGGCTGATGCGCCGGTGACA+AGG	+	chr4.1:39468838-39468857	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	39468788	39472235	39468788	ID=MS.gene050131
chr4.1	mRNA	39468788	39472235	39468788	ID=MS.gene050131.t1;Parent=MS.gene050131
chr4.1	exon	39471923	39472235	39471923	ID=MS.gene050131.t1.exon1;Parent=MS.gene050131.t1
chr4.1	CDS	39471923	39472235	39471923	ID=cds.MS.gene050131.t1;Parent=MS.gene050131.t1
chr4.1	exon	39470234	39470463	39470234	ID=MS.gene050131.t1.exon2;Parent=MS.gene050131.t1
chr4.1	CDS	39470234	39470463	39470234	ID=cds.MS.gene050131.t1;Parent=MS.gene050131.t1
chr4.1	exon	39468788	39469066	39468788	ID=MS.gene050131.t1.exon3;Parent=MS.gene050131.t1
chr4.1	CDS	39468788	39469066	39468788	ID=cds.MS.gene050131.t1;Parent=MS.gene050131.t1

Gene Sequence

>MS.gene050131

ATGGCAAAGCAACTAGAACCATGGCACGACCTCGCCGGCAAAGTTGTCCTTGTCACCGGCGCATCAGCCGGAATCGGACGTGATTTCTGCCTTGATCTGGCTCGTGCTGGATGTCTTGTAATCGCGGCGGCTCGTCGTGTAGATCGTTTACAGTCATTGTGTGATGAAATCAATGGAAAGGAGGGAAGTCTCCGTGCAGTTGCGGTGGAGCTTGATGTGGCGGCTGATGGTGGAGCTATAGAGAAGTATGTGCAGAAGGCGTGGGAGGCTTTTGGACATATTGATGTGTTGATCAATAATGCCGGTGTTAGAGGTAATTTGAATTTTAACGTTTAAATCTACCAGACACTCTTTAGATTAGACGTGTCTAACACCAACACGACACTCGCTGAAACATATAATTATACCGGATTATATGATTTTCTCGAATTATTAGTGATATCAGCATGTCAGTGTCCATGTCGTGTCTAATATCTGTAGCATGTCAGTGTCCATGTCGTGTCTAATATCTATCGCATGCTTTATAGATTTCGATGATGTTTACGTTGATTAATTTATATTTAAATATGATTTTGTTTCACTAAATTAATTTTTTTTTTGTCACAAAAATATTGTTGTTTTTTAGTTGATTCAAAAAGTTGATGATGGCTCTTGTTGAAGAAAAAATAAAGTTTATGATGATTTATTGTTTGTGTGAAGGAATCGTTCTTTATTTGAGATGTGGTACCAAGCGGTGCAATATTGAAAAGGGAAAAAAATGTGTGACACAAAATAAAAGTTATTAAAGTTTATACTATTTTCTTTTTTGAATCATAAAGTTTATACTACTTTTTTTTAATCATAAGTTTATACTACTTTGTCCGCTACATATGTAGCAAAACTCTGTTTTTATTTTTTCTTTCTAAATTACTTTTTTGTCCAATATTTCACTTTAATACCTTAAAAAATAGTATTAGTTTTATTGTGATTCCTTACGCTATCGGTGTTGAACACTTTGGGTTCTTGAATTTATTTCATTTTATTTTGATCATCTAAATTTTAAACATTAGACACTTTGGCATGATAAATTACAAACGCTAGACATTTTAATCCCTTATATTATAAGTATTAGACTATTTGATCCCTTAAGTTACTAGCATGTATATTTACAAAAAGGATCATAGCGTCTAACATTTACAACTTGATGGAACTAAAGGGTCCAATATTTTCAAGTTACCAAAATGGAATCAAAAGCACTTATGGGATTAAATTGTCTAATGTTTGTAACTCAGAGATCAAAGTGAAACGGAAAAAACTTAAATGCTAAATAAAACTTAAAAAATATTTCGAAGAACCAAAAATATATACTACTATAATTTAGCACTTTTCTTCGAATGATTGGTTAAATTCAGCAAAAACTTAAAGAACAAAAGTGTATGAAAAAAATATTGTAAGGTAATCAAAAGTAAAGTATTTCAAGCGTTTTTTATAAATAAGTTGTTTATATAGTCGAAGATAAAAGTATAAGATTAAACTATTTTCAAAAAATAATTTTTAAGTTGCTTCTGTAAGTTATTATAATTTTTTAAAATATAAGGCACAAACAGTTGATGCATCCACCATAAGCTATATCATCCAAGTGACTGAAAGTGACTAATTGTAAAATAGAATATATAAAGATTGACCTTTCTCGACATATTTTATGCTTTGGTGTGAGATTGAACCTTTGACCACATACACTTAAAATTATTAATAAATTTTTAACGTTTTTGATTTATTGTTGTGTTGTGTAGGAAATGTGAGTTCACCCTTGGAATTGACTGAGGAGGAATGGAACAATGTGTTTAAAACAAACATAAATGGTACATGGTTGGTGTCAAAATATGTATGCAAACTCATGCGTGATTCAAAGAGGAAAGGATCAATTATCAATATCTCTTCAATTGCTGGCCTAGAGAGGGGGCAATTGCCCGGTGGAACTGCATATGCTTGTTCAAAGGCAGGTGTCAATATGCTCACAAAGGTAATTAGTCTTCAAATCAATTTTATAAATTAGACAACCTATTTTCAATTTTATCTTTGTATTTTGAATTTGTTTTCATGTGACTTGGTGCAACCTGGAAAGTTATCGTCACATGATTGAAATGTCACGGGTTAAAGTTTTGGAAATAGTCTTGTGTAAAAAACTTTGTAAGGGTTATCAGAATAGAGAATGTGATAAATGGATAATTGCAAATTGAATGTTAAATTAAACATTAATCCAAGGTTCCTTGATTTTAGGATCATTAGGCACGTGTCAATTTGCATCAACCAATTCTGATATGACAAGTGTATTTCATATGCTATTTTGAATCATAACAAAAATATGGTAAAACTACGTTTACTTCAAAAAAAAAAAAAATATGGTAAAACTACGTGCAATACATCAAATGATGAGACTTTTTTCCATAATTTTTTTCAGACCGTATATATGCGGAAACTTTAGTGGTTGTTGCCCTTTATTCTAATACTACTACTCCCTCCAGTCACTATTATAAGCAAAAGTTGACTTTTTAGATTCATTCAATAAATGATGTATGTAGTCTATATATAGACCACATACATTATTTATTGAATGAACCTAAAAAATCAACTTTTGCTTATAATAATGATCGGATGAAGTATTTGTTTTCTTTGGATGCCTTTTTGTCTTATCAAGAAATTGGTAAAATCAAGAAGTTCACGGCCTTAATTCTTGTTGCCATGTGTGATGAATCAAGAAGTTCACGTTATATCCTTATTCTCTCTCTTCATTTATCCCGCTCTATTGTTTTGGACCAATAAAATAGAGAAAGTGAAAGTTGTCATCAAAGTTGTCATAAATAGTTGTACATATATCATTACTTCTTTTAATAAAGTTGTGAATATTCATCAATTAAAATAGGGTCTTGCTAACCAATGCCCTCAGGGCAATGGTTAAGAATTTAAAAATAGAAATAATTTATAAATTTTATGTAAAAAAGGTTACTTTTTAAACTTTCAATGTCTTGAATGCATCATTTCCAAGACAAAACTTCCTTTTTAAACTTCCTTTCAATGTCTTCAGGACAATGGTTAGTAGTATTTCCCATTAAAATAATGTGTCAGAACTTAAATAATTAAGCAAAGACATACTGACATTGGTTGGTATTTTTGTAATAAAAATTGACAGGTGATGGCATTGGAATTGGGGGCACACAAAATAAGAGTGAATTCAATATCACCAGGACTTTTCAAATCTGAAATTACTGAAAATTTGATGAAGAAAGATTGGCTAAACAATGTAGCCATGAGAACAGTGCCATTAAGAGAATGGGGCACTTCAAATCCAGCATTAACATCAATTGCTCGCTACTTAATTCATGATTCTTCTGAATATGTGACGGGAAATATATTTATTGCTGATGCTGGTGCTACCTTACCAGGCTTTCCTATTTATTCCTCACTATGA

Protein sequence

>MS.gene050131.t1

MAKQLEPWHDLAGKVVLVTGASAGIGRDFCLDLARAGCLVIAAARRVDRLQSLCDEINGKEGSLRAVAVELDVAADGGAIEKYVQKAWEAFGHIDVLINNAGVRGNVSSPLELTEEEWNNVFKTNINGTWLVSKYVCKLMRDSKRKGSIINISSIAGLERGQLPGGTAYACSKAGVNMLTKVMALELGAHKIRVNSISPGLFKSEITENLMKKDWLNNVAMRTVPLREWGTSNPALTSIARYLIHDSSEYVTGNIFIADAGATLPGFPIYSSL