Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63484.t1 | XP_013460705.1 | 96.3 | 271 | 10 | 0 | 1 | 271 | 1 | 271 | 1.90E-143 | 518.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63484.t1 | Q9LHT0 | 69.4 | 258 | 79 | 0 | 12 | 269 | 6 | 263 | 1.8e-102 | 373.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63484.t1 | A0A072UY55 | 96.3 | 271 | 10 | 0 | 1 | 271 | 1 | 271 | 1.4e-143 | 518.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049297 | MS.gene63484 | 0.810559 | 1.09E-50 | -1.69E-46 |
MS.gene049758 | MS.gene63484 | 0.822871 | 1.88E-53 | -1.69E-46 |
MS.gene050301 | MS.gene63484 | 0.812199 | 4.78E-51 | -1.69E-46 |
MS.gene050558 | MS.gene63484 | 0.850611 | 1.52E-60 | -1.69E-46 |
MS.gene05101 | MS.gene63484 | 0.80642 | 8.30E-50 | -1.69E-46 |
MS.gene051471 | MS.gene63484 | 0.810904 | 9.14E-51 | -1.69E-46 |
MS.gene051662 | MS.gene63484 | 0.850622 | 1.51E-60 | -1.69E-46 |
MS.gene051663 | MS.gene63484 | 0.826002 | 3.44E-54 | -1.69E-46 |
MS.gene052178 | MS.gene63484 | 0.806669 | 7.35E-50 | -1.69E-46 |
MS.gene052256 | MS.gene63484 | 0.817417 | 3.33E-52 | -1.69E-46 |
MS.gene053836 | MS.gene63484 | 0.828187 | 1.03E-54 | -1.69E-46 |
MS.gene054667 | MS.gene63484 | 0.808014 | 3.81E-50 | -1.69E-46 |
MS.gene054983 | MS.gene63484 | 0.810039 | 1.41E-50 | -1.69E-46 |
MS.gene055422 | MS.gene63484 | 0.826587 | 2.50E-54 | -1.69E-46 |
MS.gene055428 | MS.gene63484 | 0.815256 | 1.01E-51 | -1.69E-46 |
MS.gene056069 | MS.gene63484 | -0.81117 | 8.01E-51 | -1.69E-46 |
MS.gene057121 | MS.gene63484 | 0.820605 | 6.28E-53 | -1.69E-46 |
MS.gene057260 | MS.gene63484 | 0.879323 | 1.37E-69 | -1.69E-46 |
MS.gene05733 | MS.gene63484 | 0.800718 | 1.26E-48 | -1.69E-46 |
MS.gene057439 | MS.gene63484 | 0.842514 | 2.47E-58 | -1.69E-46 |
MS.gene058002 | MS.gene63484 | 0.804262 | 2.35E-49 | -1.69E-46 |
MS.gene058749 | MS.gene63484 | 0.805554 | 1.26E-49 | -1.69E-46 |
MS.gene058845 | MS.gene63484 | 0.818678 | 1.73E-52 | -1.69E-46 |
MS.gene059518 | MS.gene63484 | 0.815848 | 7.49E-52 | -1.69E-46 |
MS.gene05984 | MS.gene63484 | 0.80704 | 6.14E-50 | -1.69E-46 |
MS.gene059894 | MS.gene63484 | 0.813173 | 2.93E-51 | -1.69E-46 |
MS.gene060476 | MS.gene63484 | 0.860043 | 2.72E-63 | -1.69E-46 |
MS.gene061049 | MS.gene63484 | 0.824023 | 1.01E-53 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63484.t1 | MTR_3g068085 | 96.310 | 271 | 10 | 0 | 1 | 271 | 1 | 271 | 0.0 | 522 |
MS.gene63484.t1 | MTR_3g068070 | 88.636 | 264 | 30 | 0 | 1 | 264 | 1 | 264 | 2.13e-176 | 487 |
MS.gene63484.t1 | MTR_3g068065 | 85.547 | 256 | 37 | 0 | 15 | 270 | 17 | 272 | 7.64e-166 | 460 |
MS.gene63484.t1 | MTR_3g068155 | 76.692 | 266 | 62 | 0 | 6 | 271 | 10 | 275 | 1.76e-155 | 434 |
MS.gene63484.t1 | MTR_3g068175 | 73.626 | 273 | 70 | 1 | 1 | 271 | 1 | 273 | 2.71e-148 | 416 |
MS.gene63484.t1 | MTR_3g068175 | 72.563 | 277 | 70 | 2 | 1 | 271 | 1 | 277 | 4.14e-146 | 410 |
MS.gene63484.t1 | MTR_4g064883 | 61.719 | 256 | 98 | 0 | 12 | 267 | 11 | 266 | 1.23e-124 | 355 |
MS.gene63484.t1 | MTR_4g064887 | 60.305 | 262 | 104 | 0 | 1 | 262 | 1 | 262 | 1.39e-120 | 345 |
MS.gene63484.t1 | MTR_7g063320 | 60.311 | 257 | 98 | 1 | 9 | 261 | 9 | 265 | 1.59e-112 | 325 |
MS.gene63484.t1 | MTR_7g063270 | 60.853 | 258 | 98 | 1 | 6 | 260 | 7 | 264 | 2.18e-110 | 319 |
MS.gene63484.t1 | MTR_7g063390 | 59.615 | 260 | 101 | 2 | 6 | 261 | 7 | 266 | 6.52e-110 | 318 |
MS.gene63484.t1 | MTR_7g063360 | 60.385 | 260 | 99 | 2 | 6 | 261 | 7 | 266 | 9.81e-109 | 315 |
MS.gene63484.t1 | MTR_7g063330 | 57.795 | 263 | 108 | 1 | 1 | 260 | 1 | 263 | 2.64e-108 | 314 |
MS.gene63484.t1 | MTR_7g063260 | 58.687 | 259 | 103 | 1 | 6 | 260 | 7 | 265 | 1.05e-105 | 308 |
MS.gene63484.t1 | MTR_4g064887 | 60.766 | 209 | 82 | 0 | 1 | 209 | 1 | 209 | 9.87e-94 | 276 |
MS.gene63484.t1 | MTR_4g064883 | 62.626 | 198 | 74 | 0 | 12 | 209 | 11 | 208 | 6.46e-93 | 273 |
MS.gene63484.t1 | MTR_7g063270 | 50.775 | 258 | 75 | 3 | 6 | 260 | 7 | 215 | 5.92e-81 | 243 |
MS.gene63484.t1 | MTR_4g132850 | 32.114 | 246 | 162 | 4 | 15 | 259 | 7 | 248 | 1.79e-32 | 120 |
MS.gene63484.t1 | MTR_3g085740 | 30.488 | 246 | 160 | 6 | 21 | 261 | 81 | 320 | 2.07e-30 | 116 |
MS.gene63484.t1 | MTR_7g094510 | 32.400 | 250 | 153 | 9 | 20 | 259 | 11 | 254 | 1.13e-28 | 110 |
MS.gene63484.t1 | MTR_7g094520 | 33.068 | 251 | 150 | 9 | 20 | 259 | 16 | 259 | 4.63e-28 | 108 |
MS.gene63484.t1 | MTR_4g058810 | 30.651 | 261 | 168 | 9 | 14 | 264 | 10 | 267 | 3.72e-27 | 106 |
MS.gene63484.t1 | MTR_7g071680 | 31.560 | 282 | 155 | 8 | 8 | 260 | 22 | 294 | 6.18e-27 | 106 |
MS.gene63484.t1 | MTR_4g058840 | 29.730 | 259 | 171 | 7 | 15 | 264 | 11 | 267 | 3.81e-26 | 103 |
MS.gene63484.t1 | MTR_4g058820 | 29.730 | 259 | 171 | 7 | 15 | 264 | 11 | 267 | 3.81e-26 | 103 |
MS.gene63484.t1 | MTR_1196s0010 | 32.510 | 243 | 153 | 6 | 20 | 259 | 279 | 513 | 5.01e-25 | 103 |
MS.gene63484.t1 | MTR_7g083870 | 30.216 | 278 | 172 | 8 | 1 | 260 | 14 | 287 | 6.03e-23 | 95.9 |
MS.gene63484.t1 | MTR_4g052350 | 30.502 | 259 | 163 | 10 | 15 | 264 | 14 | 264 | 3.57e-22 | 93.2 |
MS.gene63484.t1 | MTR_4g131740 | 31.154 | 260 | 161 | 8 | 15 | 262 | 40 | 293 | 9.95e-22 | 92.4 |
MS.gene63484.t1 | MTR_4g052320 | 29.020 | 255 | 173 | 7 | 15 | 264 | 8 | 259 | 1.71e-20 | 88.6 |
MS.gene63484.t1 | MTR_7g107670 | 28.016 | 257 | 159 | 7 | 20 | 260 | 38 | 284 | 3.61e-20 | 88.2 |
MS.gene63484.t1 | MTR_3g020670 | 31.136 | 273 | 165 | 11 | 3 | 260 | 6 | 270 | 6.18e-20 | 87.0 |
MS.gene63484.t1 | MTR_8g442750 | 28.125 | 256 | 169 | 6 | 15 | 259 | 14 | 265 | 2.75e-19 | 85.9 |
MS.gene63484.t1 | MTR_7g113650 | 30.739 | 257 | 165 | 8 | 15 | 262 | 40 | 292 | 3.05e-19 | 85.5 |
MS.gene63484.t1 | MTR_6g023990 | 29.323 | 266 | 173 | 8 | 4 | 259 | 2 | 262 | 3.97e-19 | 84.7 |
MS.gene63484.t1 | MTR_3g068075 | 82.000 | 50 | 8 | 1 | 123 | 171 | 1 | 50 | 4.12e-19 | 80.1 |
MS.gene63484.t1 | MTR_6g023590 | 27.925 | 265 | 177 | 7 | 4 | 259 | 2 | 261 | 6.81e-19 | 84.0 |
MS.gene63484.t1 | MTR_4g058830 | 34.146 | 164 | 101 | 6 | 106 | 264 | 52 | 213 | 8.53e-19 | 82.8 |
MS.gene63484.t1 | MTR_1g051165 | 26.172 | 256 | 175 | 8 | 21 | 263 | 20 | 274 | 1.11e-18 | 84.0 |
MS.gene63484.t1 | MTR_4g052300 | 28.235 | 255 | 174 | 8 | 15 | 264 | 8 | 258 | 1.44e-18 | 83.2 |
MS.gene63484.t1 | MTR_4g052340 | 27.652 | 264 | 164 | 7 | 15 | 264 | 14 | 264 | 2.09e-18 | 82.8 |
MS.gene63484.t1 | MTR_1g068955 | 30.350 | 257 | 158 | 9 | 20 | 263 | 19 | 267 | 4.04e-18 | 82.4 |
MS.gene63484.t1 | MTR_4g078630 | 29.304 | 273 | 169 | 10 | 3 | 260 | 8 | 271 | 1.09e-17 | 81.3 |
MS.gene63484.t1 | MTR_1g082760 | 27.907 | 258 | 173 | 7 | 15 | 263 | 40 | 293 | 1.22e-17 | 81.3 |
MS.gene63484.t1 | MTR_7g105460 | 27.338 | 278 | 180 | 10 | 4 | 270 | 2 | 268 | 7.31e-17 | 78.6 |
MS.gene63484.t1 | MTR_6g023600 | 28.302 | 265 | 176 | 7 | 4 | 259 | 2 | 261 | 1.33e-16 | 77.8 |
MS.gene63484.t1 | MTR_7g105590 | 30.645 | 186 | 122 | 5 | 15 | 197 | 8 | 189 | 1.70e-16 | 76.3 |
MS.gene63484.t1 | MTR_5g098650 | 68.627 | 51 | 16 | 0 | 221 | 271 | 124 | 174 | 2.04e-16 | 75.5 |
MS.gene63484.t1 | MTR_6g023950 | 27.376 | 263 | 181 | 7 | 4 | 259 | 2 | 261 | 9.41e-16 | 75.5 |
MS.gene63484.t1 | MTR_6g023610 | 27.473 | 273 | 180 | 9 | 4 | 265 | 2 | 267 | 2.92e-15 | 73.9 |
MS.gene63484.t1 | MTR_7g105580 | 27.059 | 255 | 152 | 8 | 15 | 260 | 8 | 237 | 4.17e-15 | 73.6 |
MS.gene63484.t1 | MTR_8g044240 | 27.350 | 234 | 142 | 8 | 15 | 233 | 69 | 289 | 6.57e-15 | 73.9 |
MS.gene63484.t1 | MTR_7g110140 | 27.863 | 262 | 181 | 7 | 11 | 267 | 2 | 260 | 7.04e-15 | 72.8 |
MS.gene63484.t1 | MTR_8g089575 | 30.348 | 201 | 131 | 5 | 20 | 213 | 50 | 248 | 8.99e-15 | 73.2 |
MS.gene63484.t1 | MTR_2g090165 | 26.692 | 266 | 184 | 7 | 11 | 269 | 2 | 263 | 1.31e-14 | 72.0 |
MS.gene63484.t1 | MTR_4g134660 | 31.138 | 167 | 112 | 2 | 21 | 184 | 12 | 178 | 2.21e-14 | 71.2 |
MS.gene63484.t1 | MTR_6g023600 | 27.925 | 265 | 171 | 7 | 4 | 259 | 2 | 255 | 3.71e-14 | 70.9 |
MS.gene63484.t1 | MTR_1579s0020 | 35.227 | 88 | 56 | 1 | 181 | 268 | 1 | 87 | 4.96e-14 | 66.6 |
MS.gene63484.t1 | MTR_7g110130 | 26.255 | 259 | 178 | 7 | 11 | 261 | 2 | 255 | 8.81e-14 | 69.7 |
MS.gene63484.t1 | MTR_7g110160 | 27.626 | 257 | 158 | 7 | 11 | 261 | 2 | 236 | 5.51e-13 | 67.4 |
MS.gene63484.t1 | MTR_6g041980 | 34.932 | 146 | 83 | 5 | 15 | 154 | 64 | 203 | 8.46e-13 | 67.0 |
MS.gene63484.t1 | MTR_6g041980 | 30.622 | 209 | 121 | 6 | 15 | 205 | 64 | 266 | 1.52e-12 | 67.0 |
MS.gene63484.t1 | MTR_6g035395 | 27.059 | 255 | 165 | 7 | 12 | 261 | 2 | 240 | 3.93e-12 | 65.1 |
MS.gene63484.t1 | MTR_6g088500 | 23.643 | 258 | 158 | 8 | 19 | 243 | 182 | 433 | 9.99e-12 | 65.1 |
MS.gene63484.t1 | MTR_3g086210 | 27.368 | 190 | 133 | 3 | 20 | 204 | 56 | 245 | 1.05e-11 | 64.3 |
MS.gene63484.t1 | MTR_3g113870 | 26.667 | 180 | 126 | 4 | 28 | 205 | 34 | 209 | 1.46e-11 | 63.2 |
MS.gene63484.t1 | MTR_7g105570 | 28.191 | 188 | 116 | 7 | 94 | 270 | 46 | 225 | 1.72e-11 | 62.8 |
MS.gene63484.t1 | MTR_1275s0010 | 25.200 | 250 | 146 | 6 | 10 | 250 | 153 | 370 | 1.81e-11 | 64.3 |
MS.gene63484.t1 | MTR_3g098470 | 33.784 | 148 | 95 | 3 | 8 | 154 | 25 | 170 | 2.28e-11 | 63.5 |
MS.gene63484.t1 | MTR_7g080410 | 26.111 | 180 | 129 | 3 | 22 | 197 | 45 | 224 | 2.60e-11 | 63.2 |
MS.gene63484.t1 | MTR_7g080410 | 26.111 | 180 | 129 | 3 | 22 | 197 | 45 | 224 | 3.12e-11 | 62.8 |
MS.gene63484.t1 | MTR_6g088500 | 25.000 | 212 | 128 | 6 | 19 | 205 | 182 | 387 | 5.83e-11 | 62.4 |
MS.gene63484.t1 | MTR_3g087850 | 26.761 | 213 | 142 | 4 | 21 | 232 | 32 | 231 | 7.93e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63484.t1 | AT5G06060 | 69.380 | 258 | 79 | 0 | 12 | 269 | 6 | 263 | 6.58e-138 | 389 |
MS.gene63484.t1 | AT2G29290 | 60.311 | 257 | 100 | 1 | 12 | 266 | 4 | 260 | 1.24e-118 | 340 |
MS.gene63484.t1 | AT2G29260 | 61.176 | 255 | 99 | 0 | 12 | 266 | 65 | 319 | 3.18e-117 | 339 |
MS.gene63484.t1 | AT2G29150 | 60.000 | 265 | 104 | 2 | 1 | 264 | 1 | 264 | 4.94e-115 | 331 |
MS.gene63484.t1 | AT2G29360 | 59.004 | 261 | 107 | 0 | 4 | 264 | 5 | 265 | 7.27e-115 | 331 |
MS.gene63484.t1 | AT1G07440 | 59.701 | 268 | 102 | 3 | 1 | 266 | 1 | 264 | 1.21e-114 | 330 |
MS.gene63484.t1 | AT2G29350 | 59.091 | 264 | 107 | 1 | 1 | 264 | 1 | 263 | 7.36e-114 | 328 |
MS.gene63484.t1 | AT1G07450 | 59.289 | 253 | 102 | 1 | 12 | 264 | 5 | 256 | 7.86e-111 | 320 |
MS.gene63484.t1 | AT2G29330 | 60.465 | 258 | 98 | 3 | 12 | 266 | 4 | 260 | 4.62e-110 | 318 |
MS.gene63484.t1 | AT2G29340 | 57.143 | 259 | 109 | 1 | 12 | 268 | 4 | 262 | 5.42e-109 | 316 |
MS.gene63484.t1 | AT2G29340 | 57.588 | 257 | 107 | 1 | 12 | 266 | 4 | 260 | 2.18e-108 | 316 |
MS.gene63484.t1 | AT2G30670 | 58.498 | 253 | 105 | 0 | 12 | 264 | 4 | 256 | 7.15e-108 | 313 |
MS.gene63484.t1 | AT2G29370 | 54.789 | 261 | 118 | 0 | 4 | 264 | 5 | 265 | 2.03e-107 | 312 |
MS.gene63484.t1 | AT2G29320 | 58.366 | 257 | 104 | 2 | 13 | 266 | 11 | 267 | 3.54e-105 | 306 |
MS.gene63484.t1 | AT2G29310 | 56.917 | 253 | 109 | 0 | 12 | 264 | 4 | 256 | 8.99e-105 | 305 |
MS.gene63484.t1 | AT2G29290 | 58.403 | 238 | 97 | 1 | 31 | 266 | 6 | 243 | 1.01e-104 | 304 |
MS.gene63484.t1 | AT2G29300 | 56.589 | 258 | 109 | 2 | 12 | 266 | 4 | 261 | 8.95e-103 | 300 |
MS.gene63484.t1 | AT2G29300 | 56.400 | 250 | 108 | 1 | 12 | 260 | 4 | 253 | 5.59e-99 | 291 |
MS.gene63484.t1 | AT2G29350 | 59.111 | 225 | 91 | 1 | 40 | 264 | 2 | 225 | 1.08e-96 | 283 |
MS.gene63484.t1 | AT2G29320 | 57.741 | 239 | 98 | 2 | 31 | 266 | 11 | 249 | 4.41e-95 | 280 |
MS.gene63484.t1 | AT2G29310 | 55.983 | 234 | 103 | 0 | 31 | 264 | 21 | 254 | 3.07e-93 | 276 |
MS.gene63484.t1 | AT2G29350 | 60.294 | 204 | 81 | 0 | 1 | 204 | 1 | 204 | 8.11e-89 | 263 |
MS.gene63484.t1 | AT2G29340 | 56.061 | 198 | 87 | 0 | 12 | 209 | 4 | 201 | 5.83e-80 | 240 |
MS.gene63484.t1 | AT2G29340 | 56.061 | 198 | 87 | 0 | 12 | 209 | 4 | 201 | 5.83e-80 | 240 |
MS.gene63484.t1 | AT2G29310 | 56.061 | 198 | 87 | 0 | 12 | 209 | 4 | 201 | 5.69e-78 | 235 |
MS.gene63484.t1 | AT2G29320 | 58.639 | 191 | 78 | 1 | 13 | 202 | 11 | 201 | 3.56e-77 | 233 |
MS.gene63484.t1 | AT1G07440 | 58.140 | 172 | 69 | 1 | 1 | 172 | 1 | 169 | 9.38e-68 | 208 |
MS.gene63484.t1 | AT2G29310 | 54.749 | 179 | 81 | 0 | 31 | 209 | 21 | 199 | 3.74e-66 | 205 |
MS.gene63484.t1 | AT2G29170 | 57.843 | 102 | 42 | 1 | 1 | 101 | 1 | 102 | 8.85e-35 | 121 |
MS.gene63484.t1 | AT4G05530 | 32.520 | 246 | 161 | 5 | 15 | 259 | 9 | 250 | 1.06e-32 | 120 |
MS.gene63484.t1 | AT5G18210 | 32.950 | 261 | 160 | 7 | 10 | 259 | 3 | 259 | 3.62e-31 | 117 |
MS.gene63484.t1 | AT3G03980 | 30.855 | 269 | 167 | 7 | 6 | 259 | 5 | 269 | 9.89e-30 | 113 |
MS.gene63484.t1 | AT1G24360 | 30.364 | 247 | 159 | 7 | 21 | 261 | 80 | 319 | 6.36e-29 | 112 |
MS.gene63484.t1 | AT4G13180 | 32.819 | 259 | 164 | 8 | 10 | 261 | 8 | 263 | 1.02e-28 | 110 |
MS.gene63484.t1 | AT5G18210 | 32.234 | 273 | 156 | 9 | 10 | 271 | 3 | 257 | 2.61e-27 | 107 |
MS.gene63484.t1 | AT3G46170 | 29.457 | 258 | 171 | 7 | 15 | 263 | 26 | 281 | 3.55e-25 | 101 |
MS.gene63484.t1 | AT3G55310 | 30.116 | 259 | 168 | 9 | 15 | 263 | 17 | 272 | 1.14e-24 | 100 |
MS.gene63484.t1 | AT1G54870 | 33.852 | 257 | 157 | 8 | 15 | 262 | 84 | 336 | 1.56e-24 | 100 |
MS.gene63484.t1 | AT1G54870 | 33.852 | 257 | 157 | 8 | 15 | 262 | 82 | 334 | 1.78e-24 | 100 |
MS.gene63484.t1 | AT3G55290 | 29.344 | 259 | 170 | 9 | 15 | 263 | 18 | 273 | 4.67e-24 | 98.6 |
MS.gene63484.t1 | AT3G55290 | 29.344 | 259 | 170 | 9 | 15 | 263 | 17 | 272 | 5.09e-24 | 98.2 |
MS.gene63484.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 15 | 271 | 1.11e-23 | 97.4 |
MS.gene63484.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 17 | 273 | 1.15e-23 | 97.4 |
MS.gene63484.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 19 | 275 | 1.18e-23 | 97.4 |
MS.gene63484.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 22 | 278 | 1.70e-23 | 97.1 |
MS.gene63484.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 15 | 271 | 1.83e-23 | 96.7 |
MS.gene63484.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 14 | 270 | 1.85e-23 | 96.7 |
MS.gene63484.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 13 | 269 | 1.91e-23 | 96.7 |
MS.gene63484.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 19 | 275 | 1.92e-23 | 96.7 |
MS.gene63484.t1 | AT3G05260 | 33.208 | 265 | 165 | 7 | 6 | 262 | 28 | 288 | 2.82e-23 | 96.7 |
MS.gene63484.t1 | AT2G17845 | 28.897 | 263 | 171 | 9 | 15 | 264 | 47 | 306 | 1.05e-22 | 95.5 |
MS.gene63484.t1 | AT3G04000 | 31.734 | 271 | 165 | 8 | 4 | 258 | 3 | 269 | 1.05e-22 | 94.7 |
MS.gene63484.t1 | AT3G26760 | 29.323 | 266 | 170 | 7 | 8 | 260 | 30 | 290 | 2.20e-21 | 91.7 |
MS.gene63484.t1 | AT3G51680 | 33.166 | 199 | 123 | 5 | 15 | 205 | 32 | 228 | 3.56e-21 | 90.9 |
MS.gene63484.t1 | AT2G47120 | 28.947 | 266 | 169 | 13 | 11 | 267 | 2 | 256 | 1.10e-19 | 86.3 |
MS.gene63484.t1 | AT2G47120 | 29.008 | 262 | 166 | 13 | 15 | 267 | 7 | 257 | 1.81e-19 | 85.5 |
MS.gene63484.t1 | AT3G12800 | 26.070 | 257 | 174 | 7 | 15 | 259 | 10 | 262 | 2.48e-19 | 85.9 |
MS.gene63484.t1 | AT4G03140 | 26.562 | 256 | 174 | 6 | 15 | 260 | 78 | 329 | 1.55e-18 | 84.3 |
MS.gene63484.t1 | AT1G52340 | 29.278 | 263 | 164 | 8 | 15 | 260 | 18 | 275 | 1.63e-18 | 83.6 |
MS.gene63484.t1 | AT2G47130 | 29.457 | 258 | 169 | 9 | 11 | 261 | 2 | 253 | 1.30e-17 | 80.5 |
MS.gene63484.t1 | AT5G04900 | 29.778 | 225 | 141 | 8 | 18 | 233 | 80 | 296 | 2.17e-16 | 78.2 |
MS.gene63484.t1 | AT1G10310 | 33.939 | 165 | 106 | 3 | 21 | 184 | 21 | 183 | 5.72e-15 | 72.8 |
MS.gene63484.t1 | AT4G13250 | 25.581 | 258 | 153 | 8 | 19 | 243 | 163 | 414 | 5.65e-14 | 72.0 |
MS.gene63484.t1 | AT3G42960 | 28.794 | 257 | 159 | 9 | 20 | 260 | 13 | 261 | 6.79e-14 | 70.5 |
MS.gene63484.t1 | AT2G47140 | 27.843 | 255 | 170 | 8 | 15 | 261 | 6 | 254 | 1.02e-13 | 69.7 |
MS.gene63484.t1 | AT5G10050 | 26.291 | 213 | 143 | 4 | 21 | 232 | 11 | 210 | 1.46e-13 | 69.3 |
MS.gene63484.t1 | AT5G65205 | 30.000 | 180 | 115 | 5 | 21 | 197 | 12 | 183 | 1.99e-13 | 69.3 |
MS.gene63484.t1 | AT3G26770 | 25.940 | 266 | 175 | 7 | 15 | 264 | 41 | 300 | 5.58e-13 | 68.2 |
MS.gene63484.t1 | AT4G09750 | 30.622 | 209 | 121 | 6 | 15 | 205 | 41 | 243 | 1.48e-12 | 67.0 |
MS.gene63484.t1 | AT3G06060 | 25.743 | 202 | 143 | 2 | 9 | 207 | 31 | 228 | 4.68e-12 | 65.5 |
MS.gene63484.t1 | AT3G06060 | 25.743 | 202 | 143 | 2 | 9 | 207 | 48 | 245 | 5.97e-12 | 65.5 |
MS.gene63484.t1 | AT3G47350 | 26.540 | 211 | 140 | 7 | 20 | 221 | 49 | 253 | 2.72e-11 | 63.2 |
MS.gene63484.t1 | AT3G47350 | 26.540 | 211 | 140 | 7 | 20 | 221 | 49 | 253 | 3.52e-11 | 62.8 |
MS.gene63484.t1 | AT3G03330 | 26.904 | 197 | 139 | 3 | 6 | 197 | 32 | 228 | 3.66e-11 | 62.8 |
Find 51 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCACAGTTTACACTTGTTCT+AGG | 0.259656 | 3.1:-56380057 | MS.gene63484:CDS |
CATCCTCTGCTTAAAGAATC+TGG | 0.325649 | 3.1:-56379579 | MS.gene63484:CDS |
AATGGGCGAAAGACAATATA+AGG | 0.356013 | 3.1:-56379351 | MS.gene63484:CDS |
GGACAGATTGTTTCTGTTGA+TGG | 0.357615 | 3.1:-56377738 | MS.gene63484:CDS |
GGTTCTGCTATACGCTTTAT+CGG | 0.380929 | 3.1:+56377819 | None:intergenic |
GTTGAAGAACTCGCTGAGTT+TGG | 0.389672 | 3.1:-56380082 | MS.gene63484:CDS |
CTGCTTAAAGAATCTGGAAA+TGG | 0.406314 | 3.1:-56379573 | MS.gene63484:CDS |
CATCACTTTCGAATAATCTT+CGG | 0.431430 | 3.1:+56379644 | None:intergenic |
TCGGCTGTATACTCAATTGT+TGG | 0.433889 | 3.1:+56379663 | None:intergenic |
CGAGAGCGTTGAATCCTTTG+AGG | 0.442296 | 3.1:+56380140 | None:intergenic |
ACCGGCGGAACGCGTGGAAT+CGG | 0.443421 | 3.1:-56380115 | MS.gene63484:CDS |
GATGGAGGATTTACTGTGAA+TGG | 0.451398 | 3.1:-56377720 | MS.gene63484:CDS |
TCTCTCACAAGCATAGGTTC+TGG | 0.458121 | 3.1:-56379522 | MS.gene63484:CDS |
TGCATACCATCTATGTCAAT+TGG | 0.460251 | 3.1:-56379604 | MS.gene63484:CDS |
TGAAATTAGGTGAACAATGC+TGG | 0.465684 | 3.1:-56379702 | MS.gene63484:intron |
AGCGTTTATTCAGCTCCTCT+TGG | 0.468728 | 3.1:+56380032 | None:intergenic |
GAAAGTGATGACTACTAACT+TGG | 0.480086 | 3.1:-56379631 | MS.gene63484:CDS |
CTCGTCACCGGCGGAACGCG+TGG | 0.489333 | 3.1:-56380121 | MS.gene63484:CDS |
TCCGATTCCACGCGTTCCGC+CGG | 0.497124 | 3.1:+56380114 | None:intergenic |
GTATTAGGTAATCCTCATGC+TGG | 0.506409 | 3.1:+56377689 | None:intergenic |
CCAGCTGCTTCCTACATCAC+TGG | 0.520639 | 3.1:-56377759 | MS.gene63484:CDS |
GGATTCAACGCTCTCGTCAC+CGG | 0.529505 | 3.1:-56380133 | MS.gene63484:CDS |
ACCACATGAAGTGTCTTCCT+TGG | 0.531653 | 3.1:-56377799 | MS.gene63484:CDS |
AACGTGGCTTCTTCTTTCAA+CGG | 0.542163 | 3.1:-56379923 | MS.gene63484:CDS |
TGATGTAGGAAGCAGCTGGC+AGG | 0.543439 | 3.1:+56377763 | None:intergenic |
TTAAACGAGTGGAAAGAGAA+AGG | 0.546612 | 3.1:-56380010 | MS.gene63484:CDS |
AGCGTCTATGCAGCAAGTAA+AGG | 0.551642 | 3.1:-56379498 | MS.gene63484:intron |
AACAATCTGTCCAGTGATGT+AGG | 0.551671 | 3.1:+56377749 | None:intergenic |
GATGTACCAATTGACATAGA+TGG | 0.556385 | 3.1:+56379598 | None:intergenic |
TTTCCAGATTCTTTAAGCAG+AGG | 0.567292 | 3.1:+56379576 | None:intergenic |
TATTAGGTAATCCTCATGCT+GGG | 0.570838 | 3.1:+56377690 | None:intergenic |
CAGATTGTTTCTGTTGATGG+AGG | 0.575569 | 3.1:-56377735 | MS.gene63484:CDS |
GAGAGCGTTGAATCCTTTGA+GGG | 0.575644 | 3.1:+56380141 | None:intergenic |
AGCTCAAGATGGTCCCTCAA+AGG | 0.580641 | 3.1:-56380154 | MS.gene63484:CDS |
AGGAAGCAGCTGGCAGGCAA+AGG | 0.580855 | 3.1:+56377769 | None:intergenic |
CCAGTGATGTAGGAAGCAGC+TGG | 0.595402 | 3.1:+56377759 | None:intergenic |
ATCATCTTCTTCTCAAAGAG+AGG | 0.596910 | 3.1:-56379957 | MS.gene63484:CDS |
AGCATTACATGTTCCACAAG+TGG | 0.604747 | 3.1:+56379295 | None:intergenic |
GTTGCATCTCTCACAAGCAT+AGG | 0.610660 | 3.1:-56379528 | MS.gene63484:CDS |
GCAGTAGCAGAAGCTCAAGA+TGG | 0.612756 | 3.1:-56380165 | MS.gene63484:CDS |
ATGGATTTCAACCCAGCATG+AGG | 0.617391 | 3.1:-56377701 | MS.gene63484:CDS |
TGAATAAACGCTTAAACGAG+TGG | 0.622975 | 3.1:-56380021 | MS.gene63484:CDS |
GGAGCAACTGCGTTGCACCC+TGG | 0.632107 | 3.1:-56379330 | MS.gene63484:CDS |
TTCAACGCTCTCGTCACCGG+CGG | 0.643369 | 3.1:-56380130 | MS.gene63484:CDS |
GTATACGAAAACACCACTTG+TGG | 0.645433 | 3.1:-56379308 | MS.gene63484:CDS |
AGAGGAGCTTATTCGAAACG+TGG | 0.683344 | 3.1:-56379939 | MS.gene63484:CDS |
CACTTGTTCTAGGAACCAAG+AGG | 0.692789 | 3.1:-56380047 | MS.gene63484:CDS |
ACCAAGGAAGACACTTCATG+TGG | 0.707139 | 3.1:+56377798 | None:intergenic |
CAGGCAAAGGAAAGTCACCA+AGG | 0.712267 | 3.1:+56377782 | None:intergenic |
CCTAGAACAAGTGTAAACTG+TGG | 0.737540 | 3.1:+56380057 | None:intergenic |
ACAATGCTGGAACAAATGTG+AGG | 0.761871 | 3.1:-56379689 | MS.gene63484:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTAGTATTAATCTATATA+TGG | - | chr3.1:56379938-56379957 | MS.gene63484:CDS | 15.0% |
!! | CAAAAGAAAATATATAGAAA+AGG | + | chr3.1:56378002-56378021 | None:intergenic | 15.0% |
!!! | TATTCTTCTATTTTGTTATT+AGG | - | chr3.1:56378730-56378749 | MS.gene63484:intron | 15.0% |
!!! | TTTGTAATCATGATTTTATT+TGG | - | chr3.1:56378663-56378682 | MS.gene63484:intron | 15.0% |
!! | AATTCTTTAGATAATTGAAC+AGG | - | chr3.1:56378873-56378892 | MS.gene63484:intron | 20.0% |
!! | ATCCATTATATTTAAGCAAA+AGG | + | chr3.1:56378431-56378450 | None:intergenic | 20.0% |
!! | TAGAACCAAAAAGAATAAAT+TGG | - | chr3.1:56379141-56379160 | MS.gene63484:intron | 20.0% |
!!! | AACCTTTTGCTTAAATATAA+TGG | - | chr3.1:56378426-56378445 | MS.gene63484:intron | 20.0% |
!!! | AGTAACCAATTTATTCTTTT+TGG | + | chr3.1:56379149-56379168 | None:intergenic | 20.0% |
!!! | TTTTGCTTAAATATAATGGA+TGG | - | chr3.1:56378430-56378449 | MS.gene63484:intron | 20.0% |
! | AAAAAATCTTGCTTGTGAAT+GGG | - | chr3.1:56378505-56378524 | MS.gene63484:intron | 25.0% |
! | ATCAAAATTGCTTGCATATT+TGG | - | chr3.1:56378899-56378918 | MS.gene63484:intron | 25.0% |
! | ATGTATATGATACACAATTG+TGG | - | chr3.1:56379476-56379495 | MS.gene63484:intron | 25.0% |
! | ATTCATTTAGTATTGCATAC+AGG | - | chr3.1:56379374-56379393 | MS.gene63484:CDS | 25.0% |
! | ATTGAAGATATATCCAATGT+CGG | + | chr3.1:56378095-56378114 | None:intergenic | 25.0% |
! | CAATGTAATTACTTCCATAA+AGG | - | chr3.1:56379039-56379058 | MS.gene63484:intron | 25.0% |
! | CATACGAATAAGAAATGAAT+TGG | - | chr3.1:56379682-56379701 | MS.gene63484:CDS | 25.0% |
! | TAAAAAAAATGACAAAGCCA+TGG | + | chr3.1:56378628-56378647 | None:intergenic | 25.0% |
! | TACTCTTATCACAAGTTTAA+TGG | - | chr3.1:56378968-56378987 | MS.gene63484:intron | 25.0% |
! | TATGATGTTCTTGTGAAATT+AGG | - | chr3.1:56378158-56378177 | MS.gene63484:intron | 25.0% |
! | TCAAAATTGCTTGCATATTT+GGG | - | chr3.1:56378900-56378919 | MS.gene63484:intron | 25.0% |
! | TGATTATCAAATGACCTTTA+TGG | + | chr3.1:56379056-56379075 | None:intergenic | 25.0% |
! | TTCATTTAGTATTGCATACA+GGG | - | chr3.1:56379375-56379394 | MS.gene63484:CDS | 25.0% |
!! | GACATACTAAAACATGATTT+TGG | + | chr3.1:56379536-56379555 | None:intergenic | 25.0% |
!!! | ACATTCATACTCATTTTTGT+AGG | - | chr3.1:56378792-56378811 | MS.gene63484:intron | 25.0% |
AATTCACAATATTTGCACCT+AGG | - | chr3.1:56379100-56379119 | MS.gene63484:intron | 30.0% | |
ACCTTCAATTATTCATTCCA+TGG | - | chr3.1:56378608-56378627 | MS.gene63484:intron | 30.0% | |
AGTCCTCAACTATAAAAGAT+TGG | + | chr3.1:56379558-56379577 | None:intergenic | 30.0% | |
ATAGTTGAGGACTGTATATT+TGG | - | chr3.1:56379565-56379584 | MS.gene63484:CDS | 30.0% | |
ATTAATACTACATGAGCACA+CGG | + | chr3.1:56379931-56379950 | None:intergenic | 30.0% | |
ATTCACAATATTTGCACCTA+GGG | - | chr3.1:56379101-56379120 | MS.gene63484:intron | 30.0% | |
ATTGGTCATTGTTTAATCAG+GGG | - | chr3.1:56378700-56378719 | MS.gene63484:intron | 30.0% | |
ATTGTTTAATCAGGGGAATA+TGG | - | chr3.1:56378707-56378726 | MS.gene63484:intron | 30.0% | |
CAAAAAATCTTGCTTGTGAA+TGG | - | chr3.1:56378504-56378523 | MS.gene63484:intron | 30.0% | |
CATCACTTTCGAATAATCTT+CGG | + | chr3.1:56378232-56378251 | None:intergenic | 30.0% | |
TTAAACAATGACCAATCAGT+CGG | + | chr3.1:56378696-56378715 | None:intergenic | 30.0% | |
! | ATATCTTCAATCAGAAGTGT+CGG | - | chr3.1:56378104-56378123 | MS.gene63484:intron | 30.0% |
! | GAGAAAGGTTTTTCTGTTTA+TGG | - | chr3.1:56377878-56377897 | MS.gene63484:intron | 30.0% |
! | GATTGGTCATTGTTTAATCA+GGG | - | chr3.1:56378699-56378718 | MS.gene63484:intron | 30.0% |
! | TGATTGGTCATTGTTTAATC+AGG | - | chr3.1:56378698-56378717 | MS.gene63484:intron | 30.0% |
! | TGTCCAATCTTTTATAGTTG+AGG | - | chr3.1:56379552-56379571 | MS.gene63484:CDS | 30.0% |
! | TTAATGGTTTTCCATGTTGA+CGG | - | chr3.1:56378984-56379003 | MS.gene63484:intron | 30.0% |
!! | AAGAAATGAATTGGCTTTGA+GGG | - | chr3.1:56379691-56379710 | MS.gene63484:CDS | 30.0% |
!! | TAAGAAATGAATTGGCTTTG+AGG | - | chr3.1:56379690-56379709 | MS.gene63484:CDS | 30.0% |
!!! | ACTTTTTTGTTAAGACGCAT+GGG | - | chr3.1:56379734-56379753 | MS.gene63484:intron | 30.0% |
!!! | TTTTGGTTCTAACTGACAAA+TGG | + | chr3.1:56379132-56379151 | None:intergenic | 30.0% |
AATGGGCGAAAGACAATATA+AGG | - | chr3.1:56378522-56378541 | MS.gene63484:intron | 35.0% | |
AATTGCTTGCATATTTGGGA+TGG | - | chr3.1:56378904-56378923 | MS.gene63484:intron | 35.0% | |
ACATACGTGAATCAAACAGA+AGG | + | chr3.1:56379460-56379479 | None:intergenic | 35.0% | |
ATCATCTTCTTCTCAAAGAG+AGG | - | chr3.1:56377916-56377935 | MS.gene63484:intron | 35.0% | |
ATCCCTTCACAAATTGTCTA+TGG | - | chr3.1:56379275-56379294 | MS.gene63484:intron | 35.0% | |
CTGCTTAAAGAATCTGGAAA+TGG | - | chr3.1:56378300-56378319 | MS.gene63484:intron | 35.0% | |
GAAAGTGATGACTACTAACT+TGG | - | chr3.1:56378242-56378261 | MS.gene63484:intron | 35.0% | |
GAGGACTGTATATTTGGATA+TGG | - | chr3.1:56379571-56379590 | MS.gene63484:CDS | 35.0% | |
GATGTACCAATTGACATAGA+TGG | + | chr3.1:56378278-56378297 | None:intergenic | 35.0% | |
GCCATGGAATGAATAATTGA+AGG | + | chr3.1:56378612-56378631 | None:intergenic | 35.0% | |
TAATCGTCAGTGTTGTCAAA+TGG | + | chr3.1:56379340-56379359 | None:intergenic | 35.0% | |
TGAAATTAGGTGAACAATGC+TGG | - | chr3.1:56378171-56378190 | MS.gene63484:intron | 35.0% | |
TGAATAAACGCTTAAACGAG+TGG | - | chr3.1:56377852-56377871 | MS.gene63484:CDS | 35.0% | |
TGCATACCATCTATGTCAAT+TGG | - | chr3.1:56378269-56378288 | MS.gene63484:intron | 35.0% | |
TTAAACGAGTGGAAAGAGAA+AGG | - | chr3.1:56377863-56377882 | MS.gene63484:CDS | 35.0% | |
TTGGTTTATCTGTGTATGGA+GGG | - | chr3.1:56379840-56379859 | MS.gene63484:intron | 35.0% | |
TTTCCAGATTCTTTAAGCAG+AGG | + | chr3.1:56378300-56378319 | None:intergenic | 35.0% | |
! | GATACATTTTTCCGTCAACA+TGG | + | chr3.1:56378998-56379017 | None:intergenic | 35.0% |
! | TGGCTCTTTAACATTTTTCC+TGG | - | chr3.1:56379759-56379778 | MS.gene63484:intron | 35.0% |
!! | ATGATTTTGGCATCTTCACA+TGG | + | chr3.1:56379523-56379542 | None:intergenic | 35.0% |
!!! | GACTTTTTTGTTAAGACGCA+TGG | - | chr3.1:56379733-56379752 | MS.gene63484:intron | 35.0% |
AACAATCTGTCCAGTGATGT+AGG | + | chr3.1:56380127-56380146 | None:intergenic | 40.0% | |
AACAGAAGGCAGTGGAATTA+TGG | + | chr3.1:56379446-56379465 | None:intergenic | 40.0% | |
AACGTGGCTTCTTCTTTCAA+CGG | - | chr3.1:56377950-56377969 | MS.gene63484:intron | 40.0% | |
ACAATGCTGGAACAAATGTG+AGG | - | chr3.1:56378184-56378203 | MS.gene63484:intron | 40.0% | |
ACAGTTGTAGCAAGTGATTC+TGG | - | chr3.1:56379626-56379645 | MS.gene63484:CDS | 40.0% | |
AGCATTACATGTTCCACAAG+TGG | + | chr3.1:56378581-56378600 | None:intergenic | 40.0% | |
CACATGGATCAAGGTAACAT+TGG | + | chr3.1:56379507-56379526 | None:intergenic | 40.0% | |
CAGTTGTAGCAAGTGATTCT+GGG | - | chr3.1:56379627-56379646 | MS.gene63484:CDS | 40.0% | |
CATCCTCTGCTTAAAGAATC+TGG | - | chr3.1:56378294-56378313 | MS.gene63484:intron | 40.0% | |
CCACAGTTTACACTTGTTCT+AGG | - | chr3.1:56377816-56377835 | MS.gene63484:CDS | 40.0% | |
CCTAGAACAAGTGTAAACTG+TGG | + | chr3.1:56377819-56377838 | None:intergenic | 40.0% | |
CCTTCACAAATTGTCTATGG+CGG | - | chr3.1:56379278-56379297 | MS.gene63484:intron | 40.0% | |
CGCCATAGACAATTTGTGAA+GGG | + | chr3.1:56379280-56379299 | None:intergenic | 40.0% | |
GATGGAGGATTTACTGTGAA+TGG | - | chr3.1:56380153-56380172 | MS.gene63484:CDS | 40.0% | |
GGGCATCAATATGGCAAATA+TGG | - | chr3.1:56379711-56379730 | MS.gene63484:intron | 40.0% | |
GGTTCTGCTATACGCTTTAT+CGG | + | chr3.1:56380057-56380076 | None:intergenic | 40.0% | |
GTACTTGTCTGTAGTCTTTG+AGG | - | chr3.1:56378844-56378863 | MS.gene63484:intron | 40.0% | |
GTATACGAAAACACCACTTG+TGG | - | chr3.1:56378565-56378584 | MS.gene63484:intron | 40.0% | |
TCGGCTGTATACTCAATTGT+TGG | + | chr3.1:56378213-56378232 | None:intergenic | 40.0% | |
TTTGTTAAGACGCATGGGTT+TGG | - | chr3.1:56379739-56379758 | MS.gene63484:intron | 40.0% | |
! | AAGTGGTGTTTTCGTATACC+AGG | + | chr3.1:56378564-56378583 | None:intergenic | 40.0% |
! | AGTGGTGTTTTCGTATACCA+GGG | + | chr3.1:56378563-56378582 | None:intergenic | 40.0% |
! | GTTGGTTTATCTGTGTATGG+AGG | - | chr3.1:56379839-56379858 | MS.gene63484:intron | 40.0% |
! | TGGAGGGTTTTCTGCTATAT+AGG | - | chr3.1:56379856-56379875 | MS.gene63484:intron | 40.0% |
!! | CAGATTGTTTCTGTTGATGG+AGG | - | chr3.1:56380138-56380157 | MS.gene63484:CDS | 40.0% |
!! | GGACAGATTGTTTCTGTTGA+TGG | - | chr3.1:56380135-56380154 | MS.gene63484:CDS | 40.0% |
!! | GTGGTTGGTTTATCTGTGTA+TGG | - | chr3.1:56379836-56379855 | MS.gene63484:intron | 40.0% |
ACCAAGGAAGACACTTCATG+TGG | + | chr3.1:56380078-56380097 | None:intergenic | 45.0% | |
AGAGGAGCTTATTCGAAACG+TGG | - | chr3.1:56377934-56377953 | MS.gene63484:intron | 45.0% | |
AGCGTCTATGCAGCAAGTAA+AGG | - | chr3.1:56378375-56378394 | MS.gene63484:intron | 45.0% | |
AGCGTTTATTCAGCTCCTCT+TGG | + | chr3.1:56377844-56377863 | None:intergenic | 45.0% | |
ATGGATTTCAACCCAGCATG+AGG | - | chr3.1:56380172-56380191 | MS.gene63484:CDS | 45.0% | |
CCGCCATAGACAATTTGTGA+AGG | + | chr3.1:56379281-56379300 | None:intergenic | 45.0% | |
CGATGGTGCAATATGACAGA+AGG | - | chr3.1:56379198-56379217 | MS.gene63484:intron | 45.0% | |
GTGAATCAAACAGAAGGCAG+TGG | + | chr3.1:56379454-56379473 | None:intergenic | 45.0% | |
GTGATTACCAGTGTTGTCGA+TGG | - | chr3.1:56379181-56379200 | MS.gene63484:intron | 45.0% | |
GTTGAAGAACTCGCTGAGTT+TGG | - | chr3.1:56377791-56377810 | MS.gene63484:CDS | 45.0% | |
GTTGCATCTCTCACAAGCAT+AGG | - | chr3.1:56378345-56378364 | MS.gene63484:intron | 45.0% | |
TATTGCACCATCGACAACAC+TGG | + | chr3.1:56379191-56379210 | None:intergenic | 45.0% | |
TCTCTCACAAGCATAGGTTC+TGG | - | chr3.1:56378351-56378370 | MS.gene63484:intron | 45.0% | |
TGGCATCTTCACATGGATCA+AGG | + | chr3.1:56379516-56379535 | None:intergenic | 45.0% | |
TTGTAGCAAGTGATTCTGGG+TGG | - | chr3.1:56379630-56379649 | MS.gene63484:CDS | 45.0% | |
! | ACCACATGAAGTGTCTTCCT+TGG | - | chr3.1:56380074-56380093 | MS.gene63484:CDS | 45.0% |
! | GCTGCAATGGCGTATTTCTA+TGG | + | chr3.1:56379234-56379253 | None:intergenic | 45.0% |
! | TTGGATGAACACCGACTGAT+TGG | - | chr3.1:56378682-56378701 | MS.gene63484:intron | 45.0% |
!! | CACTTGTTCTAGGAACCAAG+AGG | - | chr3.1:56377826-56377845 | MS.gene63484:CDS | 45.0% |
!! | GAGAGCGTTGAATCCTTTGA+GGG | + | chr3.1:56377735-56377754 | None:intergenic | 45.0% |
!! | TGGCTTTGAGGGCATCAATA+TGG | - | chr3.1:56379702-56379721 | MS.gene63484:intron | 45.0% |
AACCACACGTCATTCTGCCA+TGG | - | chr3.1:56379311-56379330 | MS.gene63484:CDS | 50.0% | |
ACCACCTACACAAACACAGC+AGG | + | chr3.1:56379821-56379840 | None:intergenic | 50.0% | |
ACTAGAGCATGTGCAGATCC+AGG | + | chr3.1:56379780-56379799 | None:intergenic | 50.0% | |
AGCTCAAGATGGTCCCTCAA+AGG | - | chr3.1:56377719-56377738 | MS.gene63484:CDS | 50.0% | |
CAGGCAAAGGAAAGTCACCA+AGG | + | chr3.1:56380094-56380113 | None:intergenic | 50.0% | |
CATGTGTCTGTGTCCGACAT+TGG | - | chr3.1:56378079-56378098 | MS.gene63484:intron | 50.0% | |
GCAGTAGCAGAAGCTCAAGA+TGG | - | chr3.1:56377708-56377727 | MS.gene63484:CDS | 50.0% | |
GCTGTGTTTGTGTAGGTGGT+TGG | - | chr3.1:56379821-56379840 | MS.gene63484:intron | 50.0% | |
GTGTTGTCAAATGGCTGCCA+TGG | + | chr3.1:56379331-56379350 | None:intergenic | 50.0% | |
TGTGCCTGCTGTGTTTGTGT+AGG | - | chr3.1:56379814-56379833 | MS.gene63484:intron | 50.0% | |
!! | CGAGAGCGTTGAATCCTTTG+AGG | + | chr3.1:56377736-56377755 | None:intergenic | 50.0% |
CCAGCTGCTTCCTACATCAC+TGG | - | chr3.1:56380114-56380133 | MS.gene63484:CDS | 55.0% | |
CCAGTGATGTAGGAAGCAGC+TGG | + | chr3.1:56380117-56380136 | None:intergenic | 55.0% | |
CTGACAAATGGCGCTTCCCT+AGG | + | chr3.1:56379120-56379139 | None:intergenic | 55.0% | |
GCCTGCTGTGTTTGTGTAGG+TGG | - | chr3.1:56379817-56379836 | MS.gene63484:intron | 55.0% | |
GGATTCAACGCTCTCGTCAC+CGG | - | chr3.1:56377740-56377759 | MS.gene63484:CDS | 55.0% | |
TGATGTAGGAAGCAGCTGGC+AGG | + | chr3.1:56380113-56380132 | None:intergenic | 55.0% | |
TGCCATGGCAGAATGACGTG+TGG | + | chr3.1:56379316-56379335 | None:intergenic | 55.0% | |
TGGCATGGCATAGGCTGCAA+TGG | + | chr3.1:56379247-56379266 | None:intergenic | 55.0% | |
TTGCAGCCTATGCCATGCCA+TGG | - | chr3.1:56379247-56379266 | MS.gene63484:intron | 55.0% | |
TTGTGAAGGGATGCCTGCCA+TGG | + | chr3.1:56379267-56379286 | None:intergenic | 55.0% | |
AAGGGATGCCTGCCATGGCA+TGG | + | chr3.1:56379262-56379281 | None:intergenic | 60.0% | |
AGCCTATGCCATGCCATGGC+AGG | - | chr3.1:56379251-56379270 | MS.gene63484:intron | 60.0% | |
AGGAAGCAGCTGGCAGGCAA+AGG | + | chr3.1:56380107-56380126 | None:intergenic | 60.0% | |
TGCCTGCCATGGCATGGCAT+AGG | + | chr3.1:56379256-56379275 | None:intergenic | 60.0% | |
TTCAACGCTCTCGTCACCGG+CGG | - | chr3.1:56377743-56377762 | MS.gene63484:CDS | 60.0% | |
ACCGGCGGAACGCGTGGAAT+CGG | - | chr3.1:56377758-56377777 | MS.gene63484:CDS | 65.0% | |
GGAGCAACTGCGTTGCACCC+TGG | - | chr3.1:56378543-56378562 | MS.gene63484:intron | 65.0% | |
TCCGATTCCACGCGTTCCGC+CGG | + | chr3.1:56377762-56377781 | None:intergenic | 65.0% | |
CTCGTCACCGGCGGAACGCG+TGG | - | chr3.1:56377752-56377771 | MS.gene63484:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 56377692 | 56380203 | 56377692 | ID=MS.gene63484 |
chr3.1 | mRNA | 56377692 | 56380203 | 56377692 | ID=MS.gene63484.t1;Parent=MS.gene63484 |
chr3.1 | exon | 56379907 | 56380203 | 56379907 | ID=MS.gene63484.t1.exon1;Parent=MS.gene63484.t1 |
chr3.1 | CDS | 56379907 | 56380203 | 56379907 | ID=cds.MS.gene63484.t1;Parent=MS.gene63484.t1 |
chr3.1 | exon | 56379499 | 56379715 | 56379499 | ID=MS.gene63484.t1.exon2;Parent=MS.gene63484.t1 |
chr3.1 | CDS | 56379499 | 56379715 | 56379499 | ID=cds.MS.gene63484.t1;Parent=MS.gene63484.t1 |
chr3.1 | exon | 56379303 | 56379409 | 56379303 | ID=MS.gene63484.t1.exon3;Parent=MS.gene63484.t1 |
chr3.1 | CDS | 56379303 | 56379409 | 56379303 | ID=cds.MS.gene63484.t1;Parent=MS.gene63484.t1 |
chr3.1 | exon | 56377692 | 56377886 | 56377692 | ID=MS.gene63484.t1.exon4;Parent=MS.gene63484.t1 |
chr3.1 | CDS | 56377692 | 56377886 | 56377692 | ID=cds.MS.gene63484.t1;Parent=MS.gene63484.t1 |
Gene Sequence |
Protein sequence |