AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene021510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021510.t1 MTR_1g009010 99.762 421 1 0 1 421 1 421 0.0 851
MS.gene021510.t1 MTR_3g109300 93.079 419 29 0 2 420 252 670 0.0 770
MS.gene021510.t1 MTR_7g087530 24.251 334 234 6 55 378 76 400 2.25e-21 96.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021510.t1 AT1G29150 86.265 415 56 1 7 421 6 419 0.0 704
MS.gene021510.t1 AT1G29150 86.265 415 56 1 7 421 6 419 0.0 704
MS.gene021510.t1 AT2G26990 21.690 355 259 7 34 378 55 400 5.21e-16 80.1

Find 93 sgRNAs with CRISPR-Local

Find 104 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATAATTTCAGGGATCTTT+TGG 0.192366 1.4:-10782579 None:intergenic
AAGCAGTTTCAAATAATTTC+AGG 0.248613 1.4:-10782589 None:intergenic
TACACAGCAACATGTATTTC+AGG 0.261616 1.4:-10782445 None:intergenic
GCAATATCTTGGACCTGATT+TGG 0.308447 1.4:+10782526 MS.gene021510:CDS
ATATTGCAGGCCTGCTTTAG+AGG 0.337336 1.4:-10782510 None:intergenic
TCTTTCATGCGCAGAGCATC+AGG 0.340066 1.4:-10781816 None:intergenic
TTCAGGCTAAAGACGGCTTT+GGG 0.358755 1.4:-10782428 None:intergenic
CAAGAAGTTCGCTGGGACAT+TGG 0.366159 1.4:+10782808 MS.gene021510:CDS
GCTTTCATTGCATCCAAATC+AGG 0.369042 1.4:-10782539 None:intergenic
TAGAAACCATTTCTAATGTT+GGG 0.370156 1.4:+10782897 MS.gene021510:CDS
GAAATGGTTTCTAAAGTTGC+AGG 0.374373 1.4:-10782887 None:intergenic
TTTCAGGCTAAAGACGGCTT+TGG 0.375816 1.4:-10782429 None:intergenic
CAAGCTTTGACTCTCCTTAG+TGG 0.388037 1.4:+10782131 MS.gene021510:CDS
GACTTTCCCAACATTAGAAA+TGG 0.391872 1.4:-10782903 None:intergenic
CCTTCTCAGGCAAGAGAATA+GGG 0.395870 1.4:+10781863 MS.gene021510:CDS
AATCCCACTCTGCAAATCTA+TGG 0.395909 1.4:-10782324 None:intergenic
CTTTCGCTCCACGTGATCAA+TGG 0.400421 1.4:-10782765 None:intergenic
CGAGACTTCAAGGCACAGTT+GGG 0.400670 1.4:+10782614 MS.gene021510:CDS
TTTGACTCTCCTTAGTGGCT+TGG 0.409710 1.4:+10782136 MS.gene021510:CDS
AACTGCTTTACGAGACTTCA+AGG 0.415681 1.4:+10782604 MS.gene021510:CDS
TACTCTTCTGATGGAAAGTA+AGG 0.419643 1.4:+10782100 MS.gene021510:CDS
CAAACCTCACCGACCTTCTC+AGG 0.419854 1.4:+10781850 MS.gene021510:CDS
ATCCCTGTATGATACCCTTC+TGG 0.426885 1.4:+10782667 MS.gene021510:CDS
AAAGCAGGCCTGCAATATCT+TGG 0.428220 1.4:+10782515 MS.gene021510:CDS
TCCATTCTTTATCGTGTACT+TGG 0.428345 1.4:+10781777 MS.gene021510:CDS
GCTTGGTCAAAGAGGTTAGA+AGG 0.428699 1.4:+10782153 MS.gene021510:CDS
TTAGAAACCATTTCTAATGT+TGG 0.430658 1.4:+10782896 MS.gene021510:CDS
ACCTTCTCAGGCAAGAGAAT+AGG 0.449371 1.4:+10781862 MS.gene021510:CDS
GTCTATTGCTCAGGCATTGG+AGG 0.453941 1.4:+10781731 MS.gene021510:CDS
GAGATCTCATGTCATTATCT+TGG 0.457490 1.4:-10782951 None:intergenic
AGCAGTTTCAAATAATTTCA+GGG 0.458625 1.4:-10782588 None:intergenic
AATTTCACTATGCAAAGAAA+TGG 0.464269 1.4:+10782016 MS.gene021510:CDS
AGCTGTTCTTGCAGCTGTGA+GGG 0.469625 1.4:-10782264 None:intergenic
GCAATTTCAACCCTTGAGAA+TGG 0.470337 1.4:-10782716 None:intergenic
CCTCTTTGACCAAGCCACTA+AGG 0.474592 1.4:-10782145 None:intergenic
GCTCCAGAAGGGTATCATAC+AGG 0.475823 1.4:-10782670 None:intergenic
TTTCGCTCCACGTGATCAAT+GGG 0.485219 1.4:-10782764 None:intergenic
AATCAGGTCCAAGATATTGC+AGG 0.487957 1.4:-10782523 None:intergenic
GATTCTGTTGCTAAAATACC+AGG 0.490110 1.4:+10781978 MS.gene021510:CDS
GGGATGATCCAATCGTTCAT+AGG 0.490676 1.4:+10782636 MS.gene021510:CDS
TGCTCTGCGCATGAAAGAGC+AGG 0.492288 1.4:+10781821 MS.gene021510:CDS
CCCTATTCTCTTGCCTGAGA+AGG 0.492528 1.4:-10781863 None:intergenic
CACAACAGAGTCTATTGCTC+AGG 0.495213 1.4:+10781722 MS.gene021510:CDS
AGAGTCTATTGCTCAGGCAT+TGG 0.499267 1.4:+10781728 MS.gene021510:CDS
ACCAAGTACACGATAAAGAA+TGG 0.500491 1.4:-10781778 None:intergenic
CAGCTGTTCTTGCAGCTGTG+AGG 0.517302 1.4:-10782265 None:intergenic
CTTTCTGAGGCAGCGAATTG+AGG 0.519044 1.4:+10782067 MS.gene021510:CDS
GTCAAGTGCCTATGAACGAT+TGG 0.521697 1.4:-10782644 None:intergenic
GGGACATTGGATCAAGGTGC+TGG 0.531380 1.4:+10782821 MS.gene021510:CDS
TCTATGGCACCTTGTTGAGC+TGG 0.543072 1.4:-10782308 None:intergenic
GCAATAGACTCTGTTGTGGC+AGG 0.543654 1.4:-10781717 None:intergenic
CTCCAGAAGGGTATCATACA+GGG 0.544409 1.4:-10782669 None:intergenic
CTCAATTCGCTGCCTCAGAA+AGG 0.545619 1.4:-10782066 None:intergenic
TGCAAAGATTCTGCTCCAGA+AGG 0.549152 1.4:-10782682 None:intergenic
CATGTTGCTGTGTAAGATCA+TGG 0.549562 1.4:+10782454 MS.gene021510:CDS
CGAGCTTCCCATTGATCACG+TGG 0.562921 1.4:+10782757 MS.gene021510:CDS
ACGAGACTTCAAGGCACAGT+TGG 0.565359 1.4:+10782613 MS.gene021510:CDS
CCTTAGTGGCTTGGTCAAAG+AGG 0.571283 1.4:+10782145 MS.gene021510:CDS
AGAGCATCAGGGGATGAAGA+AGG 0.572998 1.4:-10781804 None:intergenic
GATTGATTGAACCATTCTCA+AGG 0.573343 1.4:+10782705 MS.gene021510:CDS
GATTCTTCATGCTGAAGAGA+AGG 0.574447 1.4:+10782343 MS.gene021510:CDS
GTGCCATAGATTTGCAGAGT+GGG 0.575197 1.4:+10782321 MS.gene021510:CDS
TTCGCTGGGACATTGGATCA+AGG 0.575199 1.4:+10782815 MS.gene021510:CDS
GCAAGTCTATGTCTACAAGT+AGG 0.577240 1.4:-10782190 None:intergenic
CTTTCATGCGCAGAGCATCA+GGG 0.581958 1.4:-10781815 None:intergenic
GGAATCATATCCTCTAAAGC+AGG 0.583289 1.4:+10782500 MS.gene021510:CDS
TAGACTCTGTTGTGGCAGGA+AGG 0.584069 1.4:-10781713 None:intergenic
CATGTATTTCAGGCTAAAGA+CGG 0.589827 1.4:-10782435 None:intergenic
AAGGCTTGCTACTCTTCTGA+TGG 0.595479 1.4:+10782091 MS.gene021510:CDS
TGAGGCAGCGAATTGAGGCA+AGG 0.595879 1.4:+10782072 MS.gene021510:CDS
AGTCAAGCTGATGATGTGGC+TGG 0.596537 1.4:+10782479 MS.gene021510:CDS
ATGGCACCTTGTTGAGCTGG+TGG 0.598642 1.4:-10782305 None:intergenic
TTCTAATGTTGGGAAAGTCG+TGG 0.601063 1.4:+10782907 MS.gene021510:CDS
ATTTGTAACTCAGATGTCCC+TGG 0.601526 1.4:-10781996 None:intergenic
TTTCATGCGCAGAGCATCAG+GGG 0.602569 1.4:-10781814 None:intergenic
CTTGCCTGAGAAGGTCGGTG+AGG 0.609314 1.4:-10781854 None:intergenic
ATTGATTGAACCATTCTCAA+GGG 0.609884 1.4:+10782706 MS.gene021510:CDS
GCAGCCTTCTCACTCAGTTG+AGG 0.611712 1.4:+10781898 MS.gene021510:CDS
GCAAAGATTCTGCTCCAGAA+GGG 0.618885 1.4:-10782681 None:intergenic
ATGACCTCAACTGAGTGAGA+AGG 0.626789 1.4:-10781902 None:intergenic
ATGAAAAGCGTACCTTTCTG+AGG 0.631690 1.4:+10782054 MS.gene021510:CDS
TATGCAAAGAAATGGTGCAA+TGG 0.632106 1.4:+10782024 MS.gene021510:CDS
GGCAGGAAGGAAAGAAGACA+TGG 0.635532 1.4:-10781700 None:intergenic
ATTCTCTTGCCTGAGAAGGT+CGG 0.636643 1.4:-10781859 None:intergenic
TAGGATCGTCAAAGATGACA+AGG 0.650133 1.4:-10782847 None:intergenic
GAGACTTCAAGGCACAGTTG+GGG 0.656008 1.4:+10782615 MS.gene021510:CDS
TATGTTCCACCAGCTCAACA+AGG 0.660678 1.4:+10782299 MS.gene021510:CDS
GGTTAGTCAAGCTGATGATG+TGG 0.670365 1.4:+10782475 MS.gene021510:CDS
AAAACTGCAAAGATTGTGAG+GGG 0.672793 1.4:+10781948 MS.gene021510:CDS
ATTCTGTTGCTAAAATACCA+GGG 0.677431 1.4:+10781979 MS.gene021510:CDS
AGACTTCAAGGCACAGTTGG+GGG 0.696743 1.4:+10782616 MS.gene021510:CDS
CTGAGCAATAGACTCTGTTG+TGG 0.698808 1.4:-10781721 None:intergenic
GGTGCCATAGATTTGCAGAG+TGG 0.753705 1.4:+10782320 MS.gene021510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAGCAGTTTCAAATAATTTC+AGG - chr1.4:10782592-10782611 None:intergenic 25.0%
! AATTTCACTATGCAAAGAAA+TGG + chr1.4:10782016-10782035 MS.gene021510:CDS 25.0%
! AGCAGTTTCAAATAATTTCA+GGG - chr1.4:10782591-10782610 None:intergenic 25.0%
! TAGAAACCATTTCTAATGTT+GGG + chr1.4:10782897-10782916 MS.gene021510:CDS 25.0%
! TTAGAAACCATTTCTAATGT+TGG + chr1.4:10782896-10782915 MS.gene021510:CDS 25.0%
!! AAATAATTTCAGGGATCTTT+TGG - chr1.4:10782582-10782601 None:intergenic 25.0%
AAAAACTGCAAAGATTGTGA+GGG + chr1.4:10781947-10781966 MS.gene021510:CDS 30.0%
ATTCTGTTGCTAAAATACCA+GGG + chr1.4:10781979-10781998 MS.gene021510:CDS 30.0%
ATTGATTGAACCATTCTCAA+GGG + chr1.4:10782706-10782725 MS.gene021510:CDS 30.0%
! GGATATATAGCATCAGTTTT+AGG - chr1.4:10782869-10782888 None:intergenic 30.0%
!!! TGCTTTGGGAAGATTTTTTA+AGG - chr1.4:10782237-10782256 None:intergenic 30.0%
AAAACTGCAAAGATTGTGAG+GGG + chr1.4:10781948-10781967 MS.gene021510:CDS 35.0%
ACCAAGTACACGATAAAGAA+TGG - chr1.4:10781781-10781800 None:intergenic 35.0%
CAAAAACTGCAAAGATTGTG+AGG + chr1.4:10781946-10781965 MS.gene021510:CDS 35.0%
CATGTATTTCAGGCTAAAGA+CGG - chr1.4:10782438-10782457 None:intergenic 35.0%
GACTTTCCCAACATTAGAAA+TGG - chr1.4:10782906-10782925 None:intergenic 35.0%
GATTCTGTTGCTAAAATACC+AGG + chr1.4:10781978-10781997 MS.gene021510:CDS 35.0%
GATTGATTGAACCATTCTCA+AGG + chr1.4:10782705-10782724 MS.gene021510:CDS 35.0%
TACACAGCAACATGTATTTC+AGG - chr1.4:10782448-10782467 None:intergenic 35.0%
TACTCTTCTGATGGAAAGTA+AGG + chr1.4:10782100-10782119 MS.gene021510:CDS 35.0%
TATGCAAAGAAATGGTGCAA+TGG + chr1.4:10782024-10782043 MS.gene021510:CDS 35.0%
TCCATTCTTTATCGTGTACT+TGG + chr1.4:10781777-10781796 MS.gene021510:CDS 35.0%
! AATCTTTGCAGTTTTTGCCT+TGG - chr1.4:10781943-10781962 None:intergenic 35.0%
! ATCTTTGCAGTTTTTGCCTT+GGG - chr1.4:10781942-10781961 None:intergenic 35.0%
! ATTCTTTTCCTTGATTCCCA+AGG + chr1.4:10781923-10781942 MS.gene021510:CDS 35.0%
! ATTTTAGACAAGAAGTTCGC+TGG + chr1.4:10782800-10782819 MS.gene021510:CDS 35.0%
! TTTTAGACAAGAAGTTCGCT+GGG + chr1.4:10782801-10782820 MS.gene021510:CDS 35.0%
!! GAAATGGTTTCTAAAGTTGC+AGG - chr1.4:10782890-10782909 None:intergenic 35.0%
AACTGCTTTACGAGACTTCA+AGG + chr1.4:10782604-10782623 MS.gene021510:CDS 40.0%
AATCAGGTCCAAGATATTGC+AGG - chr1.4:10782526-10782545 None:intergenic 40.0%
AATCCCACTCTGCAAATCTA+TGG - chr1.4:10782327-10782346 None:intergenic 40.0%
ATTTGTAACTCAGATGTCCC+TGG - chr1.4:10781999-10782018 None:intergenic 40.0%
CATGTTGCTGTGTAAGATCA+TGG + chr1.4:10782454-10782473 MS.gene021510:CDS 40.0%
GATTCTTCATGCTGAAGAGA+AGG + chr1.4:10782343-10782362 MS.gene021510:CDS 40.0%
GCAAGTCTATGTCTACAAGT+AGG - chr1.4:10782193-10782212 None:intergenic 40.0%
GCAATATCTTGGACCTGATT+TGG + chr1.4:10782526-10782545 MS.gene021510:CDS 40.0%
GCAATTTCAACCCTTGAGAA+TGG - chr1.4:10782719-10782738 None:intergenic 40.0%
GCTTTCATTGCATCCAAATC+AGG - chr1.4:10782542-10782561 None:intergenic 40.0%
TAGGATCGTCAAAGATGACA+AGG - chr1.4:10782850-10782869 None:intergenic 40.0%
TTCTAATGTTGGGAAAGTCG+TGG + chr1.4:10782907-10782926 MS.gene021510:CDS 40.0%
! AGTTTTTGCCTTGGGAATCA+AGG - chr1.4:10781934-10781953 None:intergenic 40.0%
! ATGAAAAGCGTACCTTTCTG+AGG + chr1.4:10782054-10782073 MS.gene021510:CDS 40.0%
! TCGTGGACAGTCTTTTTGTT+AGG + chr1.4:10782924-10782943 MS.gene021510:CDS 40.0%
!! GGAATCATATCCTCTAAAGC+AGG + chr1.4:10782500-10782519 MS.gene021510:CDS 40.0%
AAAGCAGGCCTGCAATATCT+TGG + chr1.4:10782515-10782534 MS.gene021510:CDS 45.0%
ACCTTCTCAGGCAAGAGAAT+AGG + chr1.4:10781862-10781881 MS.gene021510:CDS 45.0%
AGAGTCTATTGCTCAGGCAT+TGG + chr1.4:10781728-10781747 MS.gene021510:CDS 45.0%
ATATTGCAGGCCTGCTTTAG+AGG - chr1.4:10782513-10782532 None:intergenic 45.0%
ATCCCTGTATGATACCCTTC+TGG + chr1.4:10782667-10782686 MS.gene021510:CDS 45.0%
ATGACCTCAACTGAGTGAGA+AGG - chr1.4:10781905-10781924 None:intergenic 45.0%
ATTCTCTTGCCTGAGAAGGT+CGG - chr1.4:10781862-10781881 None:intergenic 45.0%
CACAACAGAGTCTATTGCTC+AGG + chr1.4:10781722-10781741 MS.gene021510:CDS 45.0%
CCTTCTCAGGCAAGAGAATA+GGG + chr1.4:10781863-10781882 MS.gene021510:CDS 45.0%
CTGAGCAATAGACTCTGTTG+TGG - chr1.4:10781724-10781743 None:intergenic 45.0%
GCAAAGATTCTGCTCCAGAA+GGG - chr1.4:10782684-10782703 None:intergenic 45.0%
GCTTGGTCAAAGAGGTTAGA+AGG + chr1.4:10782153-10782172 MS.gene021510:CDS 45.0%
GGGATGATCCAATCGTTCAT+AGG + chr1.4:10782636-10782655 MS.gene021510:CDS 45.0%
GTCAAGTGCCTATGAACGAT+TGG - chr1.4:10782647-10782666 None:intergenic 45.0%
GTGCCATAGATTTGCAGAGT+GGG + chr1.4:10782321-10782340 MS.gene021510:CDS 45.0%
TATGTTCCACCAGCTCAACA+AGG + chr1.4:10782299-10782318 MS.gene021510:CDS 45.0%
TGCAAAGATTCTGCTCCAGA+AGG - chr1.4:10782685-10782704 None:intergenic 45.0%
TTCAGGCTAAAGACGGCTTT+GGG - chr1.4:10782431-10782450 None:intergenic 45.0%
TTTCAGGCTAAAGACGGCTT+TGG - chr1.4:10782432-10782451 None:intergenic 45.0%
TTTCGCTCCACGTGATCAAT+GGG - chr1.4:10782767-10782786 None:intergenic 45.0%
TTTGACTCTCCTTAGTGGCT+TGG + chr1.4:10782136-10782155 MS.gene021510:CDS 45.0%
! CAAGCTTTGACTCTCCTTAG+TGG + chr1.4:10782131-10782150 MS.gene021510:CDS 45.0%
! GGTTAGTCAAGCTGATGATG+TGG + chr1.4:10782475-10782494 MS.gene021510:CDS 45.0%
!! AAGGCTTGCTACTCTTCTGA+TGG + chr1.4:10782091-10782110 MS.gene021510:CDS 45.0%
!! CTCCAGAAGGGTATCATACA+GGG - chr1.4:10782672-10782691 None:intergenic 45.0%
ACGAGACTTCAAGGCACAGT+TGG + chr1.4:10782613-10782632 MS.gene021510:CDS 50.0%
AGACTTCAAGGCACAGTTGG+GGG + chr1.4:10782616-10782635 MS.gene021510:CDS 50.0%
AGCTGTTCTTGCAGCTGTGA+GGG - chr1.4:10782267-10782286 None:intergenic 50.0%
CAAGAAGTTCGCTGGGACAT+TGG + chr1.4:10782808-10782827 MS.gene021510:CDS 50.0%
CCCTATTCTCTTGCCTGAGA+AGG - chr1.4:10781866-10781885 None:intergenic 50.0%
CCTCTTTGACCAAGCCACTA+AGG - chr1.4:10782148-10782167 None:intergenic 50.0%
CGAGACTTCAAGGCACAGTT+GGG + chr1.4:10782614-10782633 MS.gene021510:CDS 50.0%
CTCAATTCGCTGCCTCAGAA+AGG - chr1.4:10782069-10782088 None:intergenic 50.0%
CTTTCGCTCCACGTGATCAA+TGG - chr1.4:10782768-10782787 None:intergenic 50.0%
GAGACTTCAAGGCACAGTTG+GGG + chr1.4:10782615-10782634 MS.gene021510:CDS 50.0%
GCAATAGACTCTGTTGTGGC+AGG - chr1.4:10781720-10781739 None:intergenic 50.0%
TAGACTCTGTTGTGGCAGGA+AGG - chr1.4:10781716-10781735 None:intergenic 50.0%
TCTATGGCACCTTGTTGAGC+TGG - chr1.4:10782311-10782330 None:intergenic 50.0%
TTCGCTGGGACATTGGATCA+AGG + chr1.4:10782815-10782834 MS.gene021510:CDS 50.0%
! AGAGCATCAGGGGATGAAGA+AGG - chr1.4:10781807-10781826 None:intergenic 50.0%
! AGTCAAGCTGATGATGTGGC+TGG + chr1.4:10782479-10782498 MS.gene021510:CDS 50.0%
! CTTTCATGCGCAGAGCATCA+GGG - chr1.4:10781818-10781837 None:intergenic 50.0%
! GGTGCCATAGATTTGCAGAG+TGG + chr1.4:10782320-10782339 MS.gene021510:CDS 50.0%
! GTGAGGGCAGCTTTTGCTTT+GGG - chr1.4:10782251-10782270 None:intergenic 50.0%
! TCTTTCATGCGCAGAGCATC+AGG - chr1.4:10781819-10781838 None:intergenic 50.0%
! TGTGAGGGCAGCTTTTGCTT+TGG - chr1.4:10782252-10782271 None:intergenic 50.0%
! TTTCATGCGCAGAGCATCAG+GGG - chr1.4:10781817-10781836 None:intergenic 50.0%
!! CCTTAGTGGCTTGGTCAAAG+AGG + chr1.4:10782145-10782164 MS.gene021510:CDS 50.0%
!! CTTTCTGAGGCAGCGAATTG+AGG + chr1.4:10782067-10782086 MS.gene021510:CDS 50.0%
!! GCTCCAGAAGGGTATCATAC+AGG - chr1.4:10782673-10782692 None:intergenic 50.0%
!! GTCTATTGCTCAGGCATTGG+AGG + chr1.4:10781731-10781750 MS.gene021510:CDS 50.0%
ATGGCACCTTGTTGAGCTGG+TGG - chr1.4:10782308-10782327 None:intergenic 55.0%
CAAACCTCACCGACCTTCTC+AGG + chr1.4:10781850-10781869 MS.gene021510:CDS 55.0%
CAGCTGTTCTTGCAGCTGTG+AGG - chr1.4:10782268-10782287 None:intergenic 55.0%
CGAGCTTCCCATTGATCACG+TGG + chr1.4:10782757-10782776 MS.gene021510:CDS 55.0%
GCAGCCTTCTCACTCAGTTG+AGG + chr1.4:10781898-10781917 MS.gene021510:CDS 55.0%
GGGACATTGGATCAAGGTGC+TGG + chr1.4:10782821-10782840 MS.gene021510:CDS 55.0%
TGAGGCAGCGAATTGAGGCA+AGG + chr1.4:10782072-10782091 MS.gene021510:CDS 55.0%
TGCTCTGCGCATGAAAGAGC+AGG + chr1.4:10781821-10781840 MS.gene021510:CDS 55.0%
CTTGCCTGAGAAGGTCGGTG+AGG - chr1.4:10781857-10781876 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 10781702 10782967 10781702 ID=MS.gene021510
chr1.4 mRNA 10781702 10782967 10781702 ID=MS.gene021510.t1;Parent=MS.gene021510
chr1.4 exon 10781702 10782967 10781702 ID=MS.gene021510.t1.exon1;Parent=MS.gene021510.t1
chr1.4 CDS 10781702 10782967 10781702 ID=cds.MS.gene021510.t1;Parent=MS.gene021510.t1
Gene Sequence

>MS.gene021510

ATGTCTTCTTTCCTTCCTGCCACAACAGAGTCTATTGCTCAGGCATTGGAGGCTAAAGACGCATCTGAGTCTATCTCCATTCTTTATCGTGTACTTGGTGATCCTTCTTCATCCCCTGATGCTCTGCGCATGAAAGAGCAGGCTATCACAAACCTCACCGACCTTCTCAGGCAAGAGAATAGGGCAGAAGATCTGCGCAGCCTTCTCACTCAGTTGAGGTCATTCTTTTCCTTGATTCCCAAGGCAAAAACTGCAAAGATTGTGAGGGGAATAATTGATTCTGTTGCTAAAATACCAGGGACATCTGAGTTACAAATTTCACTATGCAAAGAAATGGTGCAATGGACTCGCGATGAAAAGCGTACCTTTCTGAGGCAGCGAATTGAGGCAAGGCTTGCTACTCTTCTGATGGAAAGTAAGGAATATTCACAAGCTTTGACTCTCCTTAGTGGCTTGGTCAAAGAGGTTAGAAGGCTAGATGACAAACTCCTACTTGTAGACATAGACTTGCTTGAAAGCAAGCTACACTTCTCCTTAAAAAATCTTCCCAAAGCAAAAGCTGCCCTCACAGCTGCAAGAACAGCTGCAAATGCTATTTATGTTCCACCAGCTCAACAAGGTGCCATAGATTTGCAGAGTGGGATTCTTCATGCTGAAGAGAAGGATTACAAAACTGCATACAGTTATTTCTTTGAAGCTTTTGAGTCTTTCAATGCTCTTGAAGATCCCAAAGCCGTCTTTAGCCTGAAATACATGTTGCTGTGTAAGATCATGGTTAGTCAAGCTGATGATGTGGCTGGAATCATATCCTCTAAAGCAGGCCTGCAATATCTTGGACCTGATTTGGATGCAATGAAAGCTGTTGCAGATGCTCATTCCAAAAGATCCCTGAAATTATTTGAAACTGCTTTACGAGACTTCAAGGCACAGTTGGGGGATGATCCAATCGTTCATAGGCACTTGACATCCCTGTATGATACCCTTCTGGAGCAGAATCTTTGCAGATTGATTGAACCATTCTCAAGGGTTGAAATTGCACATATTGCTGAACTTATCGAGCTTCCCATTGATCACGTGGAGCGAAAGATGTCTCAGATGATTTTAGACAAGAAGTTCGCTGGGACATTGGATCAAGGTGCTGGATGCCTTGTCATCTTTGACGATCCTAAAACTGATGCTATATATCCTGCAACTTTAGAAACCATTTCTAATGTTGGGAAAGTCGTGGACAGTCTTTTTGTTAGGTCTGCCAAGATAATGACATGA
Protein sequence

>MS.gene021510.t1

MSSFLPATTESIAQALEAKDASESISILYRVLGDPSSSPDALRMKEQAITNLTDLLRQENRAEDLRSLLTQLRSFFSLIPKAKTAKIVRGIIDSVAKIPGTSELQISLCKEMVQWTRDEKRTFLRQRIEARLATLLMESKEYSQALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLKNLPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALEDPKAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYLGPDLDAMKAVADAHSKRSLKLFETALRDFKAQLGDDPIVHRHLTSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPIDHVERKMSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLFVRSAKIMT