Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012127.t1 | XP_003629286.1 | 99.7 | 389 | 1 | 0 | 1 | 389 | 1 | 389 | 1.00E-153 | 553.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012127.t1 | P55034 | 65.3 | 380 | 115 | 5 | 1 | 375 | 1 | 368 | 1.4e-90 | 334.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012127.t1 | G7LC12 | 99.7 | 389 | 1 | 0 | 1 | 389 | 1 | 389 | 7.3e-154 | 553.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012127.t1 | MTR_8g075390 | 99.743 | 389 | 1 | 0 | 1 | 389 | 1 | 389 | 0.0 | 792 |
| MS.gene012127.t1 | MTR_5g022440 | 81.343 | 402 | 56 | 5 | 1 | 389 | 1 | 396 | 0.0 | 572 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012127.t1 | AT4G38630 | 66.838 | 389 | 109 | 7 | 1 | 384 | 1 | 374 | 1.89e-171 | 484 |
Find 104 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTGTTTCTGCAGCTTCC+TGG | 0.182434 | 8.4:+29809923 | MS.gene012127:intron |
| ATAGGCTACACTTATCATTA+TGG | 0.241037 | 8.4:+29805655 | MS.gene012127:intron |
| TCTTCCTCAGGTCTAGAAAT+AGG | 0.241655 | 8.4:+29807098 | MS.gene012127:intron |
| GTCTACCCCTACCAGTGATT+TGG | 0.242788 | 8.4:+29805982 | MS.gene012127:CDS |
| GCCTCTGCAGGTGGTGTATC+TGG | 0.245950 | 8.4:+29808259 | MS.gene012127:CDS |
| CTCTGTCGGATGTACTTATA+AGG | 0.280586 | 8.4:+29807523 | MS.gene012127:CDS |
| CTTTGTTTCTGCAGCTTCCT+GGG | 0.285905 | 8.4:+29809924 | MS.gene012127:intron |
| CCCATCTGTCAAAGATTTGC+TGG | 0.299417 | 8.4:+29809961 | MS.gene012127:CDS |
| CTCACCGCCTTTCTCCTGTT+TGG | 0.299610 | 8.4:-29808401 | None:intergenic |
| TCTTTGACAGATGGGTCATT+TGG | 0.306410 | 8.4:-29809953 | None:intergenic |
| GCTGCAGCAGCAGCCTCTGC+AGG | 0.307628 | 8.4:+29808247 | MS.gene012127:CDS |
| GCAGGAAGCAGCTGCGAAAA+AGG | 0.312036 | 8.4:+29808363 | MS.gene012127:CDS |
| AAACCTAGCTGCTGCCATTC+AGG | 0.316711 | 8.4:+29807130 | MS.gene012127:CDS |
| GCTAATTCAGGGTCCAAGTT+TGG | 0.325391 | 8.4:-29808301 | None:intergenic |
| TCTACCCCTACCAGTGATTT+GGG | 0.334303 | 8.4:+29805983 | MS.gene012127:CDS |
| CTTTGACAGATGGGTCATTT+GGG | 0.350062 | 8.4:-29809952 | None:intergenic |
| CAGTGATTTGGGCAAAATCT+TGG | 0.352937 | 8.4:+29805994 | MS.gene012127:CDS |
| CTCAGAGCAAGAGCTAATTC+AGG | 0.371235 | 8.4:-29808313 | None:intergenic |
| GGTGTATCTGGATATGATTT+TGG | 0.373205 | 8.4:+29808271 | MS.gene012127:CDS |
| TTTCGCAGCTGCTTCCTGCC+TGG | 0.391968 | 8.4:-29808359 | None:intergenic |
| CAAGAATACTACTCCTCATT+TGG | 0.400764 | 8.4:-29810641 | None:intergenic |
| CAAAACTCGAACTCCCTTCC+CGG | 0.405445 | 8.4:-29805960 | None:intergenic |
| GCTCGGTCATAGTTGCATCC+TGG | 0.408251 | 8.4:-29808438 | None:intergenic |
| AGTACATCCGACAGAGCATT+TGG | 0.417933 | 8.4:-29807516 | None:intergenic |
| TGCCATTCAGGTGGCACAGT+TGG | 0.425490 | 8.4:+29807142 | MS.gene012127:CDS |
| AGTGATTTGGGCAAAATCTT+GGG | 0.427099 | 8.4:+29805995 | MS.gene012127:CDS |
| AAGAAAATGTTGGAGATGAT+TGG | 0.430493 | 8.4:+29807351 | MS.gene012127:CDS |
| GACACTGTTAGTCTTATTTG+CGG | 0.431330 | 8.4:+29805737 | MS.gene012127:CDS |
| CTCGGTCATAGTTGCATCCT+GGG | 0.443007 | 8.4:-29808437 | None:intergenic |
| TGCAGAGGATGCTTCCAAAC+AGG | 0.449158 | 8.4:+29808387 | MS.gene012127:CDS |
| GCAGCAGCAGCCTCTGCAGG+TGG | 0.451237 | 8.4:+29808250 | MS.gene012127:CDS |
| CAATGGAAGAGGAGAGAGCC+AGG | 0.451887 | 8.4:+29808341 | MS.gene012127:CDS |
| GGAAGAGGAGAGAGCCAGGC+AGG | 0.467566 | 8.4:+29808345 | MS.gene012127:CDS |
| TGAGAATGCTCTTCTACAAC+AGG | 0.478713 | 8.4:+29809050 | MS.gene012127:CDS |
| AACTCACCTCGAGCCAACTC+AGG | 0.480781 | 8.4:-29809153 | None:intergenic |
| TGAGGGGAAGACAGAGAAGC+TGG | 0.484092 | 8.4:+29807431 | MS.gene012127:CDS |
| GCACTTGACATTGTCAACTT+TGG | 0.484613 | 8.4:+29807399 | MS.gene012127:CDS |
| TCTTGCTCTGAGAGTTTCAA+TGG | 0.484864 | 8.4:+29808324 | MS.gene012127:CDS |
| GGACGAAGTGACTAGATTGT+TGG | 0.487197 | 8.4:+29809617 | MS.gene012127:CDS |
| TATTTGCGGTGCTAAAACTC+AGG | 0.487975 | 8.4:+29805751 | MS.gene012127:CDS |
| AGCTTCTGTACTGGTTCGCT+CGG | 0.490367 | 8.4:-29808455 | None:intergenic |
| CATAGGCTCAGCTTCTGTAC+TGG | 0.491628 | 8.4:-29808464 | None:intergenic |
| TCGAACTCCCTTCCCGGCCA+TGG | 0.492622 | 8.4:-29805954 | None:intergenic |
| TCTAATCCTGAAAATACTGT+TGG | 0.499375 | 8.4:+29805923 | MS.gene012127:CDS |
| GATCATCCATTGACATTGCA+AGG | 0.500246 | 8.4:-29809074 | None:intergenic |
| ACCTGGTCCAAATGCTCTGT+CGG | 0.502391 | 8.4:+29807509 | MS.gene012127:CDS |
| TCTGAGAGTTTCAATGGAAG+AGG | 0.510357 | 8.4:+29808330 | MS.gene012127:CDS |
| ACAGGCCCTTGCAATGTCAA+TGG | 0.511218 | 8.4:+29809068 | MS.gene012127:CDS |
| CAGTACAGAAGCTGAGCCTA+TGG | 0.512282 | 8.4:+29808465 | MS.gene012127:CDS |
| CAAGCATGAGAAGAAAATGT+TGG | 0.513604 | 8.4:+29807341 | MS.gene012127:CDS |
| GCCAGCAAATCTTTGACAGA+TGG | 0.519859 | 8.4:-29809962 | None:intergenic |
| AGCCAACTGTGCCACCTGAA+TGG | 0.521804 | 8.4:-29807144 | None:intergenic |
| TTTACTGGTGATGGAGAAGG+TGG | 0.527650 | 8.4:+29808208 | MS.gene012127:CDS |
| CTTCCATCATGGTTAACTGC+AGG | 0.530356 | 8.4:-29809096 | None:intergenic |
| GTTATGACCATGGCCGGGAA+GGG | 0.531594 | 8.4:+29805947 | MS.gene012127:CDS |
| AAAATCTTGGGTTGTATGCA+TGG | 0.533026 | 8.4:+29806007 | MS.gene012127:CDS |
| GGGTCATTTGGGTCAACCCC+AGG | 0.533244 | 8.4:-29809941 | None:intergenic |
| TCAGAGCAAGAGCTAATTCA+GGG | 0.536745 | 8.4:-29808312 | None:intergenic |
| TTTGTTTCTGCAGCTTCCTG+GGG | 0.540653 | 8.4:+29809925 | MS.gene012127:intron |
| GATGCTTCCAAACAGGAGAA+AGG | 0.543596 | 8.4:+29808394 | MS.gene012127:CDS |
| CACATGGTTCATGTTCCACC+TGG | 0.545946 | 8.4:+29807492 | MS.gene012127:CDS |
| CACAGTTGGCTCTTAAGCAT+CGG | 0.549170 | 8.4:+29807156 | MS.gene012127:CDS |
| GTTGGAGTTATGACCATGGC+CGG | 0.550710 | 8.4:+29805941 | MS.gene012127:CDS |
| TGAAGAGGAGGGACCAAATG+AGG | 0.554105 | 8.4:+29810628 | MS.gene012127:CDS |
| AGAATAAGAAGCAGCAGCAA+AGG | 0.554704 | 8.4:+29807180 | MS.gene012127:CDS |
| CCAGCAAATCTTTGACAGAT+GGG | 0.555521 | 8.4:-29809961 | None:intergenic |
| CCACCTGAATGGCAGCAGCT+AGG | 0.557823 | 8.4:-29807133 | None:intergenic |
| TTTGCCCAAATCACTGGTAG+GGG | 0.564614 | 8.4:-29805987 | None:intergenic |
| CATTATTGTTTACAGCTGCA+AGG | 0.566431 | 8.4:-29807461 | None:intergenic |
| AGTTATGACCATGGCCGGGA+AGG | 0.571550 | 8.4:+29805946 | MS.gene012127:CDS |
| AGCTACAGATGACCCTGAGT+TGG | 0.581144 | 8.4:+29809140 | MS.gene012127:CDS |
| TATCTGCATCTCTTCCATCA+TGG | 0.583898 | 8.4:-29809107 | None:intergenic |
| CAACTTTGGAGAAGAAGATG+AGG | 0.586931 | 8.4:+29807413 | MS.gene012127:CDS |
| CTTTCCAACAATGGTGCTCG+AGG | 0.591593 | 8.4:+29805526 | None:intergenic |
| GGTGATGGAGAAGGTGGAAG+CGG | 0.592077 | 8.4:+29808214 | MS.gene012127:CDS |
| TGAGCAGCAAGCTACTTCCC+AGG | 0.598003 | 8.4:+29808420 | MS.gene012127:CDS |
| AACTTTGGAGAAGAAGATGA+GGG | 0.598180 | 8.4:+29807414 | MS.gene012127:CDS |
| GATCCTGCAGTTAACCATGA+TGG | 0.599212 | 8.4:+29809093 | MS.gene012127:CDS |
| CGAAGTGACTAGATTGTTGG+CGG | 0.599863 | 8.4:+29809620 | MS.gene012127:CDS |
| TCATAAGAAGAATGAAGAGG+AGG | 0.601911 | 8.4:+29810616 | MS.gene012127:CDS |
| ACTCACCTCGAGCCAACTCA+GGG | 0.602418 | 8.4:-29809152 | None:intergenic |
| TCCAGATACACCACCTGCAG+AGG | 0.602692 | 8.4:-29808260 | None:intergenic |
| TTGGAGTTATGACCATGGCC+GGG | 0.605725 | 8.4:+29805942 | MS.gene012127:CDS |
| AACTCTGAACATATGCGTAA+CGG | 0.612049 | 8.4:+29805680 | MS.gene012127:CDS |
| TCCGACAGAGCATTTGGACC+AGG | 0.615302 | 8.4:-29807510 | None:intergenic |
| CAATCTAGTCACTTCGTCCG+TGG | 0.621703 | 8.4:-29809613 | None:intergenic |
| TTATCAGACATACTGTTGCA+AGG | 0.624899 | 8.4:-29809665 | None:intergenic |
| ATCATCCATTGACATTGCAA+GGG | 0.626501 | 8.4:-29809073 | None:intergenic |
| CATAAGAAGAATGAAGAGGA+GGG | 0.627494 | 8.4:+29810617 | MS.gene012127:CDS |
| GGCTCATAAGAAGAATGAAG+AGG | 0.636641 | 8.4:+29810613 | MS.gene012127:intron |
| CAATAATGATAGTAGCCACA+TGG | 0.640045 | 8.4:+29807476 | MS.gene012127:CDS |
| TGCAAGGACATGAGATACAA+AGG | 0.642470 | 8.4:-29809649 | None:intergenic |
| CCTAGCTGCTGCCATTCAGG+TGG | 0.642995 | 8.4:+29807133 | MS.gene012127:CDS |
| TCTAGTCACTTCGTCCGTGG+TGG | 0.650322 | 8.4:-29809610 | None:intergenic |
| GATGACCCTGAGTTGGCTCG+AGG | 0.650651 | 8.4:+29809147 | MS.gene012127:CDS |
| GATTGAGCTTGAAATCGAGA+AGG | 0.652006 | 8.4:-29805713 | None:intergenic |
| GCAAATAAGACTAACAGTGT+CGG | 0.657951 | 8.4:-29805735 | None:intergenic |
| GACAGAGCATTTGGACCAGG+TGG | 0.676689 | 8.4:-29807507 | None:intergenic |
| TACTGTTGGAGTTATGACCA+TGG | 0.686072 | 8.4:+29805937 | MS.gene012127:CDS |
| TCCTCAGGTCTAGAAATAGG+CGG | 0.696316 | 8.4:+29807101 | MS.gene012127:intron |
| ACTTTGGAGAAGAAGATGAG+GGG | 0.698383 | 8.4:+29807415 | MS.gene012127:CDS |
| GCTTCCAAACAGGAGAAAGG+CGG | 0.712590 | 8.4:+29808397 | MS.gene012127:CDS |
| GTCAGTATCAGACACCACCA+CGG | 0.720202 | 8.4:+29809596 | MS.gene012127:CDS |
| CAGGTGGAACATGAACCATG+TGG | 0.807488 | 8.4:-29807491 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTAAATGTATTAG+TGG | + | chr8.4:29809700-29809719 | MS.gene012127:intron | 10.0% |
| !!! | TATTTTTTTTGCTTTTTAAA+TGG | + | chr8.4:29810349-29810368 | MS.gene012127:intron | 10.0% |
| !! | AAAAGAAAAAAAAAACACTT+GGG | - | chr8.4:29806417-29806436 | None:intergenic | 15.0% |
| !! | AAAATAAATATATGCTTAAG+CGG | + | chr8.4:29810306-29810325 | MS.gene012127:intron | 15.0% |
| !! | AAAGGCTATATATATATATA+AGG | - | chr8.4:29807907-29807926 | None:intergenic | 15.0% |
| !! | ATGAATTTATCAGATTATAA+AGG | - | chr8.4:29808124-29808143 | None:intergenic | 15.0% |
| !! | TTATATATATATATAGCCTT+TGG | + | chr8.4:29807906-29807925 | MS.gene012127:intron | 15.0% |
| !!! | CATTAATCTTTGATTTTAAT+AGG | + | chr8.4:29805637-29805656 | MS.gene012127:intron | 15.0% |
| !!! | GATAACAATTGTATTAATTT+TGG | + | chr8.4:29809306-29809325 | MS.gene012127:intron | 15.0% |
| !!! | TATGTTTAATTTTAGGTTTA+GGG | + | chr8.4:29805857-29805876 | MS.gene012127:intron | 15.0% |
| !!! | TCTTAGTTTATTTTTTTGTT+TGG | + | chr8.4:29809354-29809373 | MS.gene012127:intron | 15.0% |
| !!! | TGGTTTTTATGTTTAATTTT+AGG | + | chr8.4:29805850-29805869 | MS.gene012127:intron | 15.0% |
| !!! | TTATGTTTAATTTTAGGTTT+AGG | + | chr8.4:29805856-29805875 | MS.gene012127:intron | 15.0% |
| !! | AAAGAAAAAAAAAACACTTG+GGG | - | chr8.4:29806416-29806435 | None:intergenic | 20.0% |
| !! | AAATGAATAAATAACACTTG+GGG | - | chr8.4:29806537-29806556 | None:intergenic | 20.0% |
| !! | AATTTATCAGATTATAAAGG+AGG | - | chr8.4:29808121-29808140 | None:intergenic | 20.0% |
| !! | ACAAATGAATAAATAACACT+TGG | - | chr8.4:29806539-29806558 | None:intergenic | 20.0% |
| !! | AGAAACAAAGAATTATTACT+CGG | - | chr8.4:29809914-29809933 | None:intergenic | 20.0% |
| !! | AGATTAGAGGAAAATAAAAT+CGG | - | chr8.4:29805560-29805579 | None:intergenic | 20.0% |
| !! | ATATATATATATAAGGTGGA+TGG | - | chr8.4:29807900-29807919 | None:intergenic | 20.0% |
| !! | ATGAAAGATTTGACATTTAA+AGG | - | chr8.4:29807828-29807847 | None:intergenic | 20.0% |
| !! | ATTAGTTATTGTAAATGCTA+TGG | + | chr8.4:29808735-29808754 | MS.gene012127:intron | 20.0% |
| !! | ATTTATCAGATTATAAAGGA+GGG | - | chr8.4:29808120-29808139 | None:intergenic | 20.0% |
| !! | CAAATGAATAAATAACACTT+GGG | - | chr8.4:29806538-29806557 | None:intergenic | 20.0% |
| !! | GAAAAGAAAAAAAAAACACT+TGG | - | chr8.4:29806418-29806437 | None:intergenic | 20.0% |
| !! | TAAGTAAATTCTATGTGAAT+TGG | + | chr8.4:29806580-29806599 | MS.gene012127:intron | 20.0% |
| !! | TTAGTTATTGTAAATGCTAT+GGG | + | chr8.4:29808736-29808755 | MS.gene012127:intron | 20.0% |
| !! | TTCATAGAAAATGTTAATGT+TGG | + | chr8.4:29810051-29810070 | MS.gene012127:intron | 20.0% |
| !!! | AGTGTTGTTAAATACTTAAA+TGG | + | chr8.4:29809724-29809743 | MS.gene012127:intron | 20.0% |
| !!! | ATTTTTTCAAATCGAACTAT+TGG | + | chr8.4:29810530-29810549 | MS.gene012127:intron | 20.0% |
| !!! | CTTTATTTTATCTTTCGATA+TGG | - | chr8.4:29806221-29806240 | None:intergenic | 20.0% |
| !!! | TCTTTTTCTAAATTTGTACA+CGG | + | chr8.4:29807577-29807596 | MS.gene012127:intron | 20.0% |
| !!! | TGATTCTAAGCAATTTTTTA+GGG | + | chr8.4:29805801-29805820 | MS.gene012127:intron | 20.0% |
| !!! | TTGATTCTAAGCAATTTTTT+AGG | + | chr8.4:29805800-29805819 | MS.gene012127:intron | 20.0% |
| !!! | TTTTTTTCCTCTTAAATCTT+TGG | + | chr8.4:29806036-29806055 | MS.gene012127:intron | 20.0% |
| ! | AAAAGAGTTAGAAGAGAAAT+AGG | - | chr8.4:29807699-29807718 | None:intergenic | 25.0% |
| ! | AAATATTACACTTTCATCTG+GGG | + | chr8.4:29806961-29806980 | MS.gene012127:intron | 25.0% |
| ! | AGAAAAGAATAATACTAGAG+GGG | - | chr8.4:29808031-29808050 | None:intergenic | 25.0% |
| ! | AGAAATATTACACTTTCATC+TGG | + | chr8.4:29806959-29806978 | MS.gene012127:intron | 25.0% |
| ! | ATGAAAAAGACGTTATTCAT+TGG | - | chr8.4:29808830-29808849 | None:intergenic | 25.0% |
| ! | CATTTGTACAATTAAGTACA+AGG | + | chr8.4:29806552-29806571 | MS.gene012127:intron | 25.0% |
| ! | GAAATATTACACTTTCATCT+GGG | + | chr8.4:29806960-29806979 | MS.gene012127:intron | 25.0% |
| ! | GAGAAAAGAATAATACTAGA+GGG | - | chr8.4:29808032-29808051 | None:intergenic | 25.0% |
| ! | GGCTATATATATATATAAGG+TGG | - | chr8.4:29807904-29807923 | None:intergenic | 25.0% |
| ! | GTAAATGACATATTCAAATG+TGG | + | chr8.4:29810435-29810454 | MS.gene012127:intron | 25.0% |
| ! | GTTGTTAAATACTTAAATGG+CGG | + | chr8.4:29809727-29809746 | MS.gene012127:intron | 25.0% |
| ! | TAAAATGATAAGAAGCCAAA+AGG | - | chr8.4:29806879-29806898 | None:intergenic | 25.0% |
| ! | TAACTAATAACACAAACCAT+AGG | - | chr8.4:29808484-29808503 | None:intergenic | 25.0% |
| ! | TAAGAACTAACTTCTAACAT+AGG | - | chr8.4:29809249-29809268 | None:intergenic | 25.0% |
| ! | TAATAAAAGAAGACTTACGT+TGG | - | chr8.4:29810005-29810024 | None:intergenic | 25.0% |
| ! | TAGAATCAAGAATTAAGCAT+TGG | - | chr8.4:29805789-29805808 | None:intergenic | 25.0% |
| ! | TATATATTGCATTTCAGACT+TGG | + | chr8.4:29805830-29805849 | MS.gene012127:intron | 25.0% |
| ! | TCTGTATAATTTAAACCACA+TGG | - | chr8.4:29808712-29808731 | None:intergenic | 25.0% |
| ! | TGAGAAAAGAATAATACTAG+AGG | - | chr8.4:29808033-29808052 | None:intergenic | 25.0% |
| ! | TTTCCTTATTCAGTATAAGT+TGG | + | chr8.4:29810153-29810172 | MS.gene012127:intron | 25.0% |
| !! | AAAGCACCAAATTAGATTAT+GGG | - | chr8.4:29807308-29807327 | None:intergenic | 25.0% |
| !! | AAAGTACTTAGAATATATGC+TGG | - | chr8.4:29808688-29808707 | None:intergenic | 25.0% |
| !! | ACAAAGTTAACTGATTCAAA+CGG | - | chr8.4:29808909-29808928 | None:intergenic | 25.0% |
| !! | AGTTCGATTTGAAAAAATGT+TGG | - | chr8.4:29810528-29810547 | None:intergenic | 25.0% |
| !! | ATTGACTTATTTGAGCTTAT+CGG | + | chr8.4:29806654-29806673 | MS.gene012127:intron | 25.0% |
| !! | ATTGAGTTGTTTATCCAAAT+AGG | + | chr8.4:29806839-29806858 | MS.gene012127:intron | 25.0% |
| !! | ATTGTTTTCATAAGCTATCA+TGG | - | chr8.4:29806772-29806791 | None:intergenic | 25.0% |
| !! | ATTTCTCTTCTAACTCTTTT+TGG | + | chr8.4:29807699-29807718 | MS.gene012127:intron | 25.0% |
| !! | GTTCGATTTGAAAAAATGTT+GGG | - | chr8.4:29810527-29810546 | None:intergenic | 25.0% |
| !! | TAAAGCACCAAATTAGATTA+TGG | - | chr8.4:29807309-29807328 | None:intergenic | 25.0% |
| !! | TCTATGTGAATTGGATTTTT+AGG | + | chr8.4:29806589-29806608 | MS.gene012127:intron | 25.0% |
| !! | TCTTATCATTTTAGATGCAT+CGG | + | chr8.4:29806886-29806905 | MS.gene012127:intron | 25.0% |
| !! | TTGTTGGTGGAATTTATATA+TGG | + | chr8.4:29810236-29810255 | MS.gene012127:intron | 25.0% |
| !! | TTTTATTAGCAAATACCACT+GGG | + | chr8.4:29810017-29810036 | MS.gene012127:intron | 25.0% |
| !!! | AATGAATAACGTCTTTTTCA+TGG | + | chr8.4:29808829-29808848 | MS.gene012127:intron | 25.0% |
| !!! | ATGAATAACGTCTTTTTCAT+GGG | + | chr8.4:29808830-29808849 | MS.gene012127:intron | 25.0% |
| !!! | CATTTTGCAGTTTTTTTGTT+TGG | + | chr8.4:29808870-29808889 | MS.gene012127:intron | 25.0% |
| !!! | GATTTTTTTAAAACTGCCAT+AGG | + | chr8.4:29809763-29809782 | MS.gene012127:intron | 25.0% |
| !!! | GCTTATTTTTTAAGTTCTCT+AGG | - | chr8.4:29806286-29806305 | None:intergenic | 25.0% |
| !!! | GTATTTTGTTTGTTTCTTGA+GGG | + | chr8.4:29808058-29808077 | MS.gene012127:intron | 25.0% |
| !!! | GTTCTAAAAAATCATTCCAT+AGG | - | chr8.4:29810211-29810230 | None:intergenic | 25.0% |
| !!! | TAATTTTGGTTCAAACAAGA+GGG | + | chr8.4:29809320-29809339 | MS.gene012127:intron | 25.0% |
| !!! | TGTATTTTGTTTGTTTCTTG+AGG | + | chr8.4:29808057-29808076 | MS.gene012127:intron | 25.0% |
| !!! | TTAATTTTGGTTCAAACAAG+AGG | + | chr8.4:29809319-29809338 | MS.gene012127:intron | 25.0% |
| !!! | TTTATTCATTTTTCTTCCTC+AGG | + | chr8.4:29807086-29807105 | MS.gene012127:intron | 25.0% |
| !!! | TTTTGCTTTTTAAATGGTGA+AGG | + | chr8.4:29810355-29810374 | MS.gene012127:intron | 25.0% |
| !!! | TTTTTTAGAACCATAGTTGT+TGG | + | chr8.4:29810220-29810239 | MS.gene012127:intron | 25.0% |
| AAAAGAATAATACTAGAGGG+GGG | - | chr8.4:29808029-29808048 | None:intergenic | 30.0% | |
| AAAGAAACTATGGTCCTATT+TGG | - | chr8.4:29806856-29806875 | None:intergenic | 30.0% | |
| AAGAAAATGTTGGAGATGAT+TGG | + | chr8.4:29807351-29807370 | MS.gene012127:CDS | 30.0% | |
| AATGTTGGCATGATTGAATT+TGG | + | chr8.4:29810066-29810085 | MS.gene012127:intron | 30.0% | |
| ACTCATGTCTAGATGAATAA+TGG | - | chr8.4:29809198-29809217 | None:intergenic | 30.0% | |
| AGTCCAACTTATACTGAATA+AGG | - | chr8.4:29810159-29810178 | None:intergenic | 30.0% | |
| ATAAATTCCACCAACAACTA+TGG | - | chr8.4:29810233-29810252 | None:intergenic | 30.0% | |
| ATAGGCTACACTTATCATTA+TGG | + | chr8.4:29805655-29805674 | MS.gene012127:intron | 30.0% | |
| ATTGAATCGATGAAGATTAG+AGG | - | chr8.4:29805573-29805592 | None:intergenic | 30.0% | |
| ATTTATGTTACCTTGTGTTG+TGG | + | chr8.4:29808172-29808191 | MS.gene012127:intron | 30.0% | |
| CCATAAAGACTGATAACAAA+TGG | - | chr8.4:29808611-29808630 | None:intergenic | 30.0% | |
| CTAGTAGATAAGCTCAAATA+AGG | + | chr8.4:29806498-29806517 | MS.gene012127:intron | 30.0% | |
| CTCACTCAAATTATTTAGCA+AGG | - | chr8.4:29810286-29810305 | None:intergenic | 30.0% | |
| GAAAAGAATAATACTAGAGG+GGG | - | chr8.4:29808030-29808049 | None:intergenic | 30.0% | |
| GAAACAAGTTTACATCGTAT+TGG | + | chr8.4:29807042-29807061 | MS.gene012127:intron | 30.0% | |
| GACAAAACAGGTAACAAAAA+TGG | - | chr8.4:29808513-29808532 | None:intergenic | 30.0% | |
| GATGTACTTATAAGGTTTGT+GGG | + | chr8.4:29807531-29807550 | MS.gene012127:intron | 30.0% | |
| TCTAATCCTGAAAATACTGT+TGG | + | chr8.4:29805923-29805942 | MS.gene012127:CDS | 30.0% | |
| TGACAATCAAAACAAAGCAA+AGG | - | chr8.4:29808535-29808554 | None:intergenic | 30.0% | |
| TTATGATTGTATTGTCCATC+AGG | + | chr8.4:29810592-29810611 | MS.gene012127:intron | 30.0% | |
| ! | AGTTTTTATAGAAGGAAGGA+AGG | - | chr8.4:29808096-29808115 | None:intergenic | 30.0% |
| ! | ATAACTCCAACAGTATTTTC+AGG | - | chr8.4:29805932-29805951 | None:intergenic | 30.0% |
| ! | ATTCTAAGTACTTTTCCATG+TGG | + | chr8.4:29808694-29808713 | MS.gene012127:intron | 30.0% |
| ! | ATTTCTTGTCTTTTGTTGCT+TGG | + | chr8.4:29809561-29809580 | MS.gene012127:intron | 30.0% |
| ! | CTTTTATTAGCAAATACCAC+TGG | + | chr8.4:29810016-29810035 | MS.gene012127:intron | 30.0% |
| ! | TTTGACATTTAAAGGAGTAC+TGG | - | chr8.4:29807820-29807839 | None:intergenic | 30.0% |
| ! | TTTGTTATCAGTCTTTATGG+AGG | + | chr8.4:29808611-29808630 | MS.gene012127:intron | 30.0% |
| !! | CCATTTGTTATCAGTCTTTA+TGG | + | chr8.4:29808608-29808627 | MS.gene012127:intron | 30.0% |
| !! | TCAAGAATTAAGCATTGGAT+TGG | - | chr8.4:29805784-29805803 | None:intergenic | 30.0% |
| !! | TTTTGTTTGGTGATCTAGAT+GGG | + | chr8.4:29809367-29809386 | MS.gene012127:intron | 30.0% |
| !! | TTTTTGTTTGGTGATCTAGA+TGG | + | chr8.4:29809366-29809385 | MS.gene012127:intron | 30.0% |
| !!! | CTTCTAAAATTTTACCGAAC+AGG | - | chr8.4:29807626-29807645 | None:intergenic | 30.0% |
| !!! | TGAATTGGATTTTTAGGTTG+TGG | + | chr8.4:29806595-29806614 | MS.gene012127:intron | 30.0% |
| AACAAAGCAAAGGACAAAAC+AGG | - | chr8.4:29808525-29808544 | None:intergenic | 35.0% | |
| AACTCTGAACATATGCGTAA+CGG | + | chr8.4:29805680-29805699 | MS.gene012127:CDS | 35.0% | |
| AATCTGGTTACAATGTAGGA+TGG | + | chr8.4:29806097-29806116 | MS.gene012127:intron | 35.0% | |
| AATGTAGCAAACAACTCCAA+AGG | - | chr8.4:29807925-29807944 | None:intergenic | 35.0% | |
| ACAGGAAATCCCAATTCAAA+TGG | - | chr8.4:29807608-29807627 | None:intergenic | 35.0% | |
| ACCAAATTAGATTATGGGAG+GGG | - | chr8.4:29807303-29807322 | None:intergenic | 35.0% | |
| ACCCTCAAAAAACTATGAGT+TGG | - | chr8.4:29809445-29809464 | None:intergenic | 35.0% | |
| ACTAGTACTGCAACATGATA+CGG | - | chr8.4:29808970-29808989 | None:intergenic | 35.0% | |
| AGAGGAAAATAAAATCGGAG+AGG | - | chr8.4:29805555-29805574 | None:intergenic | 35.0% | |
| AGCCAAAAGGAAAGAAACTA+TGG | - | chr8.4:29806866-29806885 | None:intergenic | 35.0% | |
| AGGAAATCTGGTTACAATGT+AGG | + | chr8.4:29806093-29806112 | MS.gene012127:intron | 35.0% | |
| ATAAGTGCTCTATGCTATGT+TGG | + | chr8.4:29806070-29806089 | MS.gene012127:intron | 35.0% | |
| ATCATCCATTGACATTGCAA+GGG | - | chr8.4:29809076-29809095 | None:intergenic | 35.0% | |
| ATCCCTTCAAAAATTGCCTA+TGG | - | chr8.4:29809782-29809801 | None:intergenic | 35.0% | |
| ATGTTGCATGATGATTGATC+TGG | + | chr8.4:29809271-29809290 | MS.gene012127:intron | 35.0% | |
| CAAGCATGAGAAGAAAATGT+TGG | + | chr8.4:29807341-29807360 | MS.gene012127:CDS | 35.0% | |
| CAATAATGATAGTAGCCACA+TGG | + | chr8.4:29807476-29807495 | MS.gene012127:CDS | 35.0% | |
| CACCAAATTAGATTATGGGA+GGG | - | chr8.4:29807304-29807323 | None:intergenic | 35.0% | |
| CACTGCAATTCGATCAATTA+GGG | + | chr8.4:29805598-29805617 | MS.gene012127:intron | 35.0% | |
| CAGGAAATCCCAATTCAAAT+GGG | - | chr8.4:29807607-29807626 | None:intergenic | 35.0% | |
| CATAAGAAGAATGAAGAGGA+GGG | + | chr8.4:29810617-29810636 | MS.gene012127:CDS | 35.0% | |
| CATGACTCATGCACTAATAT+GGG | + | chr8.4:29808582-29808601 | MS.gene012127:intron | 35.0% | |
| CATTATTGTTTACAGCTGCA+AGG | - | chr8.4:29807464-29807483 | None:intergenic | 35.0% | |
| CTCAAATAAGCCAATCCAAA+TGG | + | chr8.4:29806389-29806408 | MS.gene012127:intron | 35.0% | |
| GAAAAATGCAACATCTCCAA+GGG | - | chr8.4:29808655-29808674 | None:intergenic | 35.0% | |
| GAAGAATTCATGGCTATTTG+GGG | - | chr8.4:29807798-29807817 | None:intergenic | 35.0% | |
| GCAAATAAGACTAACAGTGT+CGG | - | chr8.4:29805738-29805757 | None:intergenic | 35.0% | |
| GCTATAAGCTGCAAATTATG+CGG | - | chr8.4:29806157-29806176 | None:intergenic | 35.0% | |
| GGAAGAATTCATGGCTATTT+GGG | - | chr8.4:29807799-29807818 | None:intergenic | 35.0% | |
| GGATGTACTTATAAGGTTTG+TGG | + | chr8.4:29807530-29807549 | MS.gene012127:intron | 35.0% | |
| GGTATCACTTCATTGAACAT+GGG | + | chr8.4:29809388-29809407 | MS.gene012127:intron | 35.0% | |
| TATCATTCCACTAATCAGTG+TGG | - | chr8.4:29809875-29809894 | None:intergenic | 35.0% | |
| TATTAGTGCATGAGTCATGA+TGG | - | chr8.4:29808581-29808600 | None:intergenic | 35.0% | |
| TCATAAGAAGAATGAAGAGG+AGG | + | chr8.4:29810616-29810635 | MS.gene012127:CDS | 35.0% | |
| TCATGACTCATGCACTAATA+TGG | + | chr8.4:29808581-29808600 | MS.gene012127:intron | 35.0% | |
| TCTCCATCACCAGTAAAAAT+AGG | - | chr8.4:29808205-29808224 | None:intergenic | 35.0% | |
| TGGAAGAATTCATGGCTATT+TGG | - | chr8.4:29807800-29807819 | None:intergenic | 35.0% | |
| TTATCAGACATACTGTTGCA+AGG | - | chr8.4:29809668-29809687 | None:intergenic | 35.0% | |
| TTGAATTGGGATTTCCTGTT+CGG | + | chr8.4:29807609-29807628 | MS.gene012127:intron | 35.0% | |
| TTTATAGAAGGAAGGAAGGA+AGG | - | chr8.4:29808092-29808111 | None:intergenic | 35.0% | |
| TTTATTTGCGCGAAACTTCT+GGG | + | chr8.4:29808147-29808166 | MS.gene012127:intron | 35.0% | |
| ! | AAAATCTTGGGTTGTATGCA+TGG | + | chr8.4:29806007-29806026 | MS.gene012127:CDS | 35.0% |
| ! | AACTGATTCAAACGGAAATC+AGG | - | chr8.4:29808901-29808920 | None:intergenic | 35.0% |
| ! | AACTTTGGAGAAGAAGATGA+GGG | + | chr8.4:29807414-29807433 | MS.gene012127:CDS | 35.0% |
| ! | AGGAGGGAAGTTTTTATAGA+AGG | - | chr8.4:29808104-29808123 | None:intergenic | 35.0% |
| ! | AGTGATTTGGGCAAAATCTT+GGG | + | chr8.4:29805995-29806014 | MS.gene012127:CDS | 35.0% |
| ! | ATTTTCTTCTCATGCTTGAC+AGG | - | chr8.4:29807339-29807358 | None:intergenic | 35.0% |
| ! | CAAAGGATTGTTGTCTTTTG+TGG | + | chr8.4:29807197-29807216 | MS.gene012127:CDS | 35.0% |
| ! | GACCATAGTTTCTTTCCTTT+TGG | + | chr8.4:29806861-29806880 | MS.gene012127:intron | 35.0% |
| ! | GATTTTTACATCCGAGTCTT+GGG | + | chr8.4:29807947-29807966 | MS.gene012127:intron | 35.0% |
| ! | GGGAAGTTTTTATAGAAGGA+AGG | - | chr8.4:29808100-29808119 | None:intergenic | 35.0% |
| ! | GGTGTATCTGGATATGATTT+TGG | + | chr8.4:29808271-29808290 | MS.gene012127:CDS | 35.0% |
| ! | TCACTTAAAGCACCATATAG+AGG | - | chr8.4:29810392-29810411 | None:intergenic | 35.0% |
| ! | TGATTTTTACATCCGAGTCT+TGG | + | chr8.4:29807946-29807965 | MS.gene012127:intron | 35.0% |
| ! | TGCCATAGGCAATTTTTGAA+GGG | + | chr8.4:29809777-29809796 | MS.gene012127:intron | 35.0% |
| ! | TTTAGAACCATAGTTGTTGG+TGG | + | chr8.4:29810223-29810242 | MS.gene012127:intron | 35.0% |
| !! | ATCTGGATATGATTTTGGTG+TGG | + | chr8.4:29808276-29808295 | MS.gene012127:CDS | 35.0% |
| !! | GACACTGTTAGTCTTATTTG+CGG | + | chr8.4:29805737-29805756 | MS.gene012127:CDS | 35.0% |
| !! | GAGAGTACCAAAGATTTAAG+AGG | - | chr8.4:29806046-29806065 | None:intergenic | 35.0% |
| !!! | ACACCTATTTTTACTGGTGA+TGG | + | chr8.4:29808199-29808218 | MS.gene012127:CDS | 35.0% |
| !!! | AGCCAACTCATAGTTTTTTG+AGG | + | chr8.4:29809440-29809459 | MS.gene012127:intron | 35.0% |
| !!! | ATTTTTACTGGTGATGGAGA+AGG | + | chr8.4:29808205-29808224 | MS.gene012127:CDS | 35.0% |
| !!! | CTCATAGTTTTTTGAGGGTT+TGG | + | chr8.4:29809446-29809465 | MS.gene012127:intron | 35.0% |
| !!! | GCCAACTCATAGTTTTTTGA+GGG | + | chr8.4:29809441-29809460 | MS.gene012127:intron | 35.0% |
| AAAAACACTTGGGGTCCATT+TGG | - | chr8.4:29806407-29806426 | None:intergenic | 40.0% | |
| AACAGTCTCACAAGTGCTTA+TGG | + | chr8.4:29806355-29806374 | MS.gene012127:intron | 40.0% | |
| AACATCTCCAAGGGTAGTTA+TGG | - | chr8.4:29808646-29808665 | None:intergenic | 40.0% | |
| AAGCACTTGTGAGACTGTTT+GGG | - | chr8.4:29806354-29806373 | None:intergenic | 40.0% | |
| AATATATGCTGGTGAGCCAA+CGG | - | chr8.4:29808677-29808696 | None:intergenic | 40.0% | |
| AATTATGCGGTTGTCGAAAC+AGG | - | chr8.4:29806144-29806163 | None:intergenic | 40.0% | |
| AATTGATCGAATTGCAGTGG+AGG | - | chr8.4:29805597-29805616 | None:intergenic | 40.0% | |
| ACAACTTATCCCAGAAGAGA+AGG | - | chr8.4:29809495-29809514 | None:intergenic | 40.0% | |
| ACATCTCCAAGGGTAGTTAT+GGG | - | chr8.4:29808645-29808664 | None:intergenic | 40.0% | |
| ACGGCATTCCCATTTGAATT+GGG | + | chr8.4:29807596-29807615 | MS.gene012127:intron | 40.0% | |
| ACTTATTTGAGCTTATCGGC+TGG | + | chr8.4:29806658-29806677 | MS.gene012127:intron | 40.0% | |
| AGAATAAGAAGCAGCAGCAA+AGG | + | chr8.4:29807180-29807199 | MS.gene012127:CDS | 40.0% | |
| AGAGTTGAGTAGAAACAGCA+GGG | - | chr8.4:29807675-29807694 | None:intergenic | 40.0% | |
| ATGCTATGTTGGAGGAAATC+TGG | + | chr8.4:29806081-29806100 | MS.gene012127:intron | 40.0% | |
| ATGGAGCTCAAAATCAATCC+AGG | - | chr8.4:29810097-29810116 | None:intergenic | 40.0% | |
| ATTACACTTTCATCTGGGGA+TGG | + | chr8.4:29806965-29806984 | MS.gene012127:intron | 40.0% | |
| CATTCTTCTTATGAGCCTGA+TGG | - | chr8.4:29810610-29810629 | None:intergenic | 40.0% | |
| CCACTGCAATTCGATCAATT+AGG | + | chr8.4:29805597-29805616 | MS.gene012127:intron | 40.0% | |
| CCAGCAAATCTTTGACAGAT+GGG | - | chr8.4:29809964-29809983 | None:intergenic | 40.0% | |
| CCTAATTGATCGAATTGCAG+TGG | - | chr8.4:29805600-29805619 | None:intergenic | 40.0% | |
| CCTAGAGATGAAAACAACCA+TGG | - | chr8.4:29807980-29807999 | None:intergenic | 40.0% | |
| CTCTGTCGGATGTACTTATA+AGG | + | chr8.4:29807523-29807542 | MS.gene012127:CDS | 40.0% | |
| CTTTGACAGATGGGTCATTT+GGG | - | chr8.4:29809955-29809974 | None:intergenic | 40.0% | |
| GAATAGTTGCCTTCTCTTCT+GGG | + | chr8.4:29809483-29809502 | MS.gene012127:intron | 40.0% | |
| GATCATCCATTGACATTGCA+AGG | - | chr8.4:29809077-29809096 | None:intergenic | 40.0% | |
| GATTGAGCTTGAAATCGAGA+AGG | - | chr8.4:29805716-29805735 | None:intergenic | 40.0% | |
| GCAAATACCACTGGGTTTAA+AGG | + | chr8.4:29810025-29810044 | MS.gene012127:intron | 40.0% | |
| GCACCAAATTAGATTATGGG+AGG | - | chr8.4:29807305-29807324 | None:intergenic | 40.0% | |
| GCACTTGACATTGTCAACTT+TGG | + | chr8.4:29807399-29807418 | MS.gene012127:CDS | 40.0% | |
| GGAAAAATGCAACATCTCCA+AGG | - | chr8.4:29808656-29808675 | None:intergenic | 40.0% | |
| GGCTCATAAGAAGAATGAAG+AGG | + | chr8.4:29810613-29810632 | MS.gene012127:intron | 40.0% | |
| GGGTATCACTTCATTGAACA+TGG | + | chr8.4:29809387-29809406 | MS.gene012127:intron | 40.0% | |
| GGTATAAGCACTTGTGAGAT+AGG | + | chr8.4:29806679-29806698 | MS.gene012127:intron | 40.0% | |
| GTAAAGAGAGAGCCTCTATA+TGG | + | chr8.4:29810377-29810396 | MS.gene012127:intron | 40.0% | |
| GTTTATTTGCGCGAAACTTC+TGG | + | chr8.4:29808146-29808165 | MS.gene012127:intron | 40.0% | |
| TAAGCACTTGTGAGACTGTT+TGG | - | chr8.4:29806355-29806374 | None:intergenic | 40.0% | |
| TACTGTTGGAGTTATGACCA+TGG | + | chr8.4:29805937-29805956 | MS.gene012127:CDS | 40.0% | |
| TATCTGCATCTCTTCCATCA+TGG | - | chr8.4:29809110-29809129 | None:intergenic | 40.0% | |
| TCAAATAAGGCAATCCAAGC+AGG | + | chr8.4:29806511-29806530 | MS.gene012127:intron | 40.0% | |
| TCAGAGCAAGAGCTAATTCA+GGG | - | chr8.4:29808315-29808334 | None:intergenic | 40.0% | |
| TCCCCTCCCATAATCTAATT+TGG | + | chr8.4:29807299-29807318 | MS.gene012127:intron | 40.0% | |
| TCTGAGAGTTTCAATGGAAG+AGG | + | chr8.4:29808330-29808349 | MS.gene012127:CDS | 40.0% | |
| TCTGTATTGTCGTCTACCTA+TGG | + | chr8.4:29810192-29810211 | MS.gene012127:intron | 40.0% | |
| TCTTCCTCAGGTCTAGAAAT+AGG | + | chr8.4:29807098-29807117 | MS.gene012127:intron | 40.0% | |
| TCTTTGACAGATGGGTCATT+TGG | - | chr8.4:29809956-29809975 | None:intergenic | 40.0% | |
| TGAACATGGGATGCTTTGTA+TGG | + | chr8.4:29809401-29809420 | MS.gene012127:intron | 40.0% | |
| TGAAGTTCCTTTAAACCCAG+TGG | - | chr8.4:29810035-29810054 | None:intergenic | 40.0% | |
| TGAATAGTTGCCTTCTCTTC+TGG | + | chr8.4:29809482-29809501 | MS.gene012127:intron | 40.0% | |
| TGAGAATGCTCTTCTACAAC+AGG | + | chr8.4:29809050-29809069 | MS.gene012127:CDS | 40.0% | |
| TGCAAGGACATGAGATACAA+AGG | - | chr8.4:29809652-29809671 | None:intergenic | 40.0% | |
| TGGTTACAATGTAGGATGGT+GGG | + | chr8.4:29806101-29806120 | MS.gene012127:intron | 40.0% | |
| TGTAAATGCTATGGGTACAG+AGG | + | chr8.4:29808744-29808763 | MS.gene012127:intron | 40.0% | |
| TTACATCCCATAACTACCCT+TGG | + | chr8.4:29808636-29808655 | MS.gene012127:intron | 40.0% | |
| TTGTCAGGTTCTGCTATCTA+GGG | + | chr8.4:29806622-29806641 | MS.gene012127:intron | 40.0% | |
| TTTGTCAGGTTCTGCTATCT+AGG | + | chr8.4:29806621-29806640 | MS.gene012127:intron | 40.0% | |
| ! | ACTTTGGAGAAGAAGATGAG+GGG | + | chr8.4:29807415-29807434 | MS.gene012127:CDS | 40.0% |
| ! | ATTTTGCCCAAATCACTGGT+AGG | - | chr8.4:29805992-29806011 | None:intergenic | 40.0% |
| ! | CAACTTTGGAGAAGAAGATG+AGG | + | chr8.4:29807413-29807432 | MS.gene012127:CDS | 40.0% |
| ! | CAAGATTTTGCCCAAATCAC+TGG | - | chr8.4:29805996-29806015 | None:intergenic | 40.0% |
| ! | CAGTGATTTGGGCAAAATCT+TGG | + | chr8.4:29805994-29806013 | MS.gene012127:CDS | 40.0% |
| ! | CATGATGATTGATCTGGTTC+TGG | + | chr8.4:29809277-29809296 | MS.gene012127:intron | 40.0% |
| ! | CTGCCATAGGCAATTTTTGA+AGG | + | chr8.4:29809776-29809795 | MS.gene012127:intron | 40.0% |
| ! | GAGATGTTGCATTTTTCCGT+TGG | + | chr8.4:29808658-29808677 | MS.gene012127:intron | 40.0% |
| ! | GGATTGTTGTCTTTTGTGGA+AGG | + | chr8.4:29807201-29807220 | MS.gene012127:CDS | 40.0% |
| ! | TATTTGCGGTGCTAAAACTC+AGG | + | chr8.4:29805751-29805770 | MS.gene012127:CDS | 40.0% |
| ! | TCTGCTATCTAGGGTCTATT+TGG | + | chr8.4:29806631-29806650 | MS.gene012127:intron | 40.0% |
| ! | TGATTGAATTTGGCTTCACC+TGG | + | chr8.4:29810076-29810095 | MS.gene012127:intron | 40.0% |
| ! | TTAGGTTGTGGAAGTTTGTC+AGG | + | chr8.4:29806607-29806626 | MS.gene012127:intron | 40.0% |
| ! | TTTTGCCCAAATCACTGGTA+GGG | - | chr8.4:29805991-29806010 | None:intergenic | 40.0% |
| !! | AGGAGTACTGGAAGAATTCA+TGG | - | chr8.4:29807808-29807827 | None:intergenic | 40.0% |
| !! | CCATGGTTGTTTTCATCTCT+AGG | + | chr8.4:29807977-29807996 | MS.gene012127:intron | 40.0% |
| !! | GGTTGTTTTCATCTCTAGGT+TGG | + | chr8.4:29807981-29808000 | MS.gene012127:intron | 40.0% |
| !! | TACGTTGGACTGATTTTGCA+TGG | - | chr8.4:29809990-29810009 | None:intergenic | 40.0% |
| !! | TCTTGCTCTGAGAGTTTCAA+TGG | + | chr8.4:29808324-29808343 | MS.gene012127:CDS | 40.0% |
| !! | TTTTGGTGTGGATCCAAACT+TGG | + | chr8.4:29808288-29808307 | MS.gene012127:CDS | 40.0% |
| !!! | GACACTTTTTCTGTGTGAAC+TGG | + | chr8.4:29809006-29809025 | MS.gene012127:intron | 40.0% |
| !!! | GGCAGTACACCTATTTTTAC+TGG | + | chr8.4:29808193-29808212 | MS.gene012127:intron | 40.0% |
| AGTGCTCTATGCTATGTTGG+AGG | + | chr8.4:29806073-29806092 | MS.gene012127:intron | 45.0% | |
| ATCAACCCAGTTAGCACTAC+TGG | + | chr8.4:29807851-29807870 | MS.gene012127:intron | 45.0% | |
| ATGGCTAAACACCCAAGACT+CGG | - | chr8.4:29807961-29807980 | None:intergenic | 45.0% | |
| CACGGCATTCCCATTTGAAT+TGG | + | chr8.4:29807595-29807614 | MS.gene012127:intron | 45.0% | |
| CAGAGTTGAGTAGAAACAGC+AGG | - | chr8.4:29807676-29807695 | None:intergenic | 45.0% | |
| CCACTAATCAGTGTGGTCAA+TGG | - | chr8.4:29809868-29809887 | None:intergenic | 45.0% | |
| CCCATCTGTCAAAGATTTGC+TGG | + | chr8.4:29809961-29809980 | MS.gene012127:CDS | 45.0% | |
| CGAAGTGACTAGATTGTTGG+CGG | + | chr8.4:29809620-29809639 | MS.gene012127:CDS | 45.0% | |
| CTAATCAGTGTGGTCAATGG+CGG | - | chr8.4:29809865-29809884 | None:intergenic | 45.0% | |
| CTAGAGGGGGGAAAAACAAA+CGG | - | chr8.4:29808017-29808036 | None:intergenic | 45.0% | |
| CTCAGAGCAAGAGCTAATTC+AGG | - | chr8.4:29808316-29808335 | None:intergenic | 45.0% | |
| CTGGTTACAATGTAGGATGG+TGG | + | chr8.4:29806100-29806119 | MS.gene012127:intron | 45.0% | |
| CTTCCATCATGGTTAACTGC+AGG | - | chr8.4:29809099-29809118 | None:intergenic | 45.0% | |
| GATCCTGCAGTTAACCATGA+TGG | + | chr8.4:29809093-29809112 | MS.gene012127:CDS | 45.0% | |
| GATGCTTCCAAACAGGAGAA+AGG | + | chr8.4:29808394-29808413 | MS.gene012127:CDS | 45.0% | |
| GCCAGCAAATCTTTGACAGA+TGG | - | chr8.4:29809965-29809984 | None:intergenic | 45.0% | |
| GCTAATTCAGGGTCCAAGTT+TGG | - | chr8.4:29808304-29808323 | None:intergenic | 45.0% | |
| GGACGAAGTGACTAGATTGT+TGG | + | chr8.4:29809617-29809636 | MS.gene012127:CDS | 45.0% | |
| TAGTGCATGAGTCATGATGG+TGG | - | chr8.4:29808578-29808597 | None:intergenic | 45.0% | |
| TCCTCAGGTCTAGAAATAGG+CGG | + | chr8.4:29807101-29807120 | MS.gene012127:intron | 45.0% | |
| TCTACCCCTACCAGTGATTT+GGG | + | chr8.4:29805983-29806002 | MS.gene012127:CDS | 45.0% | |
| TTAAATGGCGGCAATTGCAG+TGG | + | chr8.4:29809739-29809758 | MS.gene012127:intron | 45.0% | |
| TTTGCCCAAATCACTGGTAG+GGG | - | chr8.4:29805990-29806009 | None:intergenic | 45.0% | |
| ! | AGTACATCCGACAGAGCATT+TGG | - | chr8.4:29807519-29807538 | None:intergenic | 45.0% |
| ! | CACAGTTGGCTCTTAAGCAT+CGG | + | chr8.4:29807156-29807175 | MS.gene012127:CDS | 45.0% |
| ! | CCATTGACCACACTGATTAG+TGG | + | chr8.4:29809865-29809884 | MS.gene012127:intron | 45.0% |
| !! | ACGCACTTGTGAGAGTGTTT+GGG | - | chr8.4:29806475-29806494 | None:intergenic | 45.0% |
| !! | CTTTGTTTCTGCAGCTTCCT+GGG | + | chr8.4:29809924-29809943 | MS.gene012127:intron | 45.0% |
| !! | TACGCACTTGTGAGAGTGTT+TGG | - | chr8.4:29806476-29806495 | None:intergenic | 45.0% |
| !! | TCTTTGTTTCTGCAGCTTCC+TGG | + | chr8.4:29809923-29809942 | MS.gene012127:intron | 45.0% |
| !! | TTTACTGGTGATGGAGAAGG+TGG | + | chr8.4:29808208-29808227 | MS.gene012127:CDS | 45.0% |
| !! | TTTGTTTCTGCAGCTTCCTG+GGG | + | chr8.4:29809925-29809944 | MS.gene012127:intron | 45.0% |
| !! | TTTTGAAGGGATACCCACCA+TGG | + | chr8.4:29809790-29809809 | MS.gene012127:intron | 45.0% |
| !! | TTTAAATAAAATAATTTAGT+AGG | - | chr8.4:29809692-29809711 | None:intergenic | 5.0% |
| AAACCTAGCTGCTGCCATTC+AGG | + | chr8.4:29807130-29807149 | MS.gene012127:CDS | 50.0% | |
| AATAACACTTGGGGCCTGCT+TGG | - | chr8.4:29806528-29806547 | None:intergenic | 50.0% | |
| ACAGGCCCTTGCAATGTCAA+TGG | + | chr8.4:29809068-29809087 | MS.gene012127:CDS | 50.0% | |
| ACCTGGTCCAAATGCTCTGT+CGG | + | chr8.4:29807509-29807528 | MS.gene012127:CDS | 50.0% | |
| AGACGCGACGAGAGATGAAA+TGG | - | chr8.4:29810116-29810135 | None:intergenic | 50.0% | |
| AGCATGCCAGTAGTGCTAAC+TGG | - | chr8.4:29807860-29807879 | None:intergenic | 50.0% | |
| AGCTACAGATGACCCTGAGT+TGG | + | chr8.4:29809140-29809159 | MS.gene012127:CDS | 50.0% | |
| AGGTGTACTGCCACAACACA+AGG | - | chr8.4:29808185-29808204 | None:intergenic | 50.0% | |
| CAAAACTCGAACTCCCTTCC+CGG | - | chr8.4:29805963-29805982 | None:intergenic | 50.0% | |
| CAATCTAGTCACTTCGTCCG+TGG | - | chr8.4:29809616-29809635 | None:intergenic | 50.0% | |
| CACATGGTTCATGTTCCACC+TGG | + | chr8.4:29807492-29807511 | MS.gene012127:CDS | 50.0% | |
| CACTTGGGGTCCATTTGGAT+TGG | - | chr8.4:29806402-29806421 | None:intergenic | 50.0% | |
| CAGGTGGAACATGAACCATG+TGG | - | chr8.4:29807494-29807513 | None:intergenic | 50.0% | |
| CAGTACAGAAGCTGAGCCTA+TGG | + | chr8.4:29808465-29808484 | MS.gene012127:CDS | 50.0% | |
| CATAGGCTCAGCTTCTGTAC+TGG | - | chr8.4:29808467-29808486 | None:intergenic | 50.0% | |
| CTCGGTCATAGTTGCATCCT+GGG | - | chr8.4:29808440-29808459 | None:intergenic | 50.0% | |
| GAGTCTTGGGTGTTTAGCCA+TGG | + | chr8.4:29807960-29807979 | MS.gene012127:intron | 50.0% | |
| GCATGCCAGTAGTGCTAACT+GGG | - | chr8.4:29807859-29807878 | None:intergenic | 50.0% | |
| GCTTCCAAACAGGAGAAAGG+CGG | + | chr8.4:29808397-29808416 | MS.gene012127:CDS | 50.0% | |
| GGGGAAAAACAAACGGAGCA+AGG | - | chr8.4:29808010-29808029 | None:intergenic | 50.0% | |
| GTCAGTATCAGACACCACCA+CGG | + | chr8.4:29809596-29809615 | MS.gene012127:CDS | 50.0% | |
| GTCTACCCCTACCAGTGATT+TGG | + | chr8.4:29805982-29806001 | MS.gene012127:CDS | 50.0% | |
| GTTGGAGTTATGACCATGGC+CGG | + | chr8.4:29805941-29805960 | MS.gene012127:CDS | 50.0% | |
| TGAAGAGGAGGGACCAAATG+AGG | + | chr8.4:29810628-29810647 | MS.gene012127:CDS | 50.0% | |
| TGCAGAGGATGCTTCCAAAC+AGG | + | chr8.4:29808387-29808406 | MS.gene012127:CDS | 50.0% | |
| TTGGAGTTATGACCATGGCC+GGG | + | chr8.4:29805942-29805961 | MS.gene012127:CDS | 50.0% | |
| ! | TGCATCGGCAGCTATGTGTA+TGG | + | chr8.4:29806901-29806920 | MS.gene012127:intron | 50.0% |
| !! | AACTGGCTTTCACGTGGAAC+AGG | + | chr8.4:29809023-29809042 | MS.gene012127:intron | 50.0% |
| !! | ACCGCCTATTTCTAGACCTG+AGG | - | chr8.4:29807105-29807124 | None:intergenic | 50.0% |
| !! | AGCTTCTGTACTGGTTCGCT+CGG | - | chr8.4:29808458-29808477 | None:intergenic | 50.0% |
| !! | TGTGTGAACTGGCTTTCACG+TGG | + | chr8.4:29809017-29809036 | MS.gene012127:intron | 50.0% |
| AACTCACCTCGAGCCAACTC+AGG | - | chr8.4:29809156-29809175 | None:intergenic | 55.0% | |
| ACTCACCTCGAGCCAACTCA+GGG | - | chr8.4:29809155-29809174 | None:intergenic | 55.0% | |
| AGCCAACTGTGCCACCTGAA+TGG | - | chr8.4:29807147-29807166 | None:intergenic | 55.0% | |
| AGCTGCGAAAAAGGCTGCAG+AGG | + | chr8.4:29808372-29808391 | MS.gene012127:CDS | 55.0% | |
| AGTTATGACCATGGCCGGGA+AGG | + | chr8.4:29805946-29805965 | MS.gene012127:CDS | 55.0% | |
| CAATGGAAGAGGAGAGAGCC+AGG | + | chr8.4:29808341-29808360 | MS.gene012127:CDS | 55.0% | |
| CACACTGTCATGGGGATGGA+TGG | + | chr8.4:29806931-29806950 | MS.gene012127:intron | 55.0% | |
| CATCCATCCCCATGACAGTG+TGG | - | chr8.4:29806933-29806952 | None:intergenic | 55.0% | |
| CTCACCGCCTTTCTCCTGTT+TGG | - | chr8.4:29808404-29808423 | None:intergenic | 55.0% | |
| GCAAGTGCCACACTGTCATG+GGG | + | chr8.4:29806923-29806942 | MS.gene012127:intron | 55.0% | |
| GCAGGAAGCAGCTGCGAAAA+AGG | + | chr8.4:29808363-29808382 | MS.gene012127:CDS | 55.0% | |
| GCTCGGTCATAGTTGCATCC+TGG | - | chr8.4:29808441-29808460 | None:intergenic | 55.0% | |
| GGCAAGTGCCACACTGTCAT+GGG | + | chr8.4:29806922-29806941 | MS.gene012127:intron | 55.0% | |
| GTTATGACCATGGCCGGGAA+GGG | + | chr8.4:29805947-29805966 | MS.gene012127:CDS | 55.0% | |
| TCCAGATACACCACCTGCAG+AGG | - | chr8.4:29808263-29808282 | None:intergenic | 55.0% | |
| TCTAGTCACTTCGTCCGTGG+TGG | - | chr8.4:29809613-29809632 | None:intergenic | 55.0% | |
| TGAGCAGCAAGCTACTTCCC+AGG | + | chr8.4:29808420-29808439 | MS.gene012127:CDS | 55.0% | |
| TGAGGGGAAGACAGAGAAGC+TGG | + | chr8.4:29807431-29807450 | MS.gene012127:CDS | 55.0% | |
| TGCCATTCAGGTGGCACAGT+TGG | + | chr8.4:29807142-29807161 | MS.gene012127:CDS | 55.0% | |
| TGGCAAGTGCCACACTGTCA+TGG | + | chr8.4:29806921-29806940 | MS.gene012127:intron | 55.0% | |
| ! | GACAGAGCATTTGGACCAGG+TGG | - | chr8.4:29807510-29807529 | None:intergenic | 55.0% |
| ! | TCAGTGTGGTCAATGGCGGA+AGG | - | chr8.4:29809861-29809880 | None:intergenic | 55.0% |
| ! | TCCGACAGAGCATTTGGACC+AGG | - | chr8.4:29807513-29807532 | None:intergenic | 55.0% |
| !! | GGTGATGGAGAAGGTGGAAG+CGG | + | chr8.4:29808214-29808233 | MS.gene012127:CDS | 55.0% |
| ACCCACCATGGCTGCTCCAT+AGG | + | chr8.4:29809802-29809821 | MS.gene012127:intron | 60.0% | |
| CCACCTGAATGGCAGCAGCT+AGG | - | chr8.4:29807136-29807155 | None:intergenic | 60.0% | |
| CCTAGCTGCTGCCATTCAGG+TGG | + | chr8.4:29807133-29807152 | MS.gene012127:CDS | 60.0% | |
| GCCTATGGAGCAGCCATGGT+GGG | - | chr8.4:29809806-29809825 | None:intergenic | 60.0% | |
| GCCTCTGCAGGTGGTGTATC+TGG | + | chr8.4:29808259-29808278 | MS.gene012127:CDS | 60.0% | |
| GGGTCATTTGGGTCAACCCC+AGG | - | chr8.4:29809944-29809963 | None:intergenic | 60.0% | |
| GTGCCACACTGTCATGGGGA+TGG | + | chr8.4:29806927-29806946 | MS.gene012127:intron | 60.0% | |
| TGCCTATGGAGCAGCCATGG+TGG | - | chr8.4:29809807-29809826 | None:intergenic | 60.0% | |
| TGCTGCCTATGGAGCAGCCA+TGG | - | chr8.4:29809810-29809829 | None:intergenic | 60.0% | |
| TTTCGCAGCTGCTTCCTGCC+TGG | - | chr8.4:29808362-29808381 | None:intergenic | 60.0% | |
| ! | GTGTGGTCAATGGCGGAAGG+AGG | - | chr8.4:29809858-29809877 | None:intergenic | 60.0% |
| !! | GATGACCCTGAGTTGGCTCG+AGG | + | chr8.4:29809147-29809166 | MS.gene012127:CDS | 60.0% |
| GGAAGAGGAGAGAGCCAGGC+AGG | + | chr8.4:29808345-29808364 | MS.gene012127:CDS | 65.0% | |
| TCGAACTCCCTTCCCGGCCA+TGG | - | chr8.4:29805957-29805976 | None:intergenic | 65.0% | |
| GCAGCAGCAGCCTCTGCAGG+TGG | + | chr8.4:29808250-29808269 | MS.gene012127:CDS | 70.0% | |
| GCTGCAGCAGCAGCCTCTGC+AGG | + | chr8.4:29808247-29808266 | MS.gene012127:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 29805536 | 29810655 | 29805536 | ID=MS.gene012127 |
| chr8.4 | mRNA | 29805536 | 29810655 | 29805536 | ID=MS.gene012127.t1;Parent=MS.gene012127 |
| chr8.4 | exon | 29805536 | 29805547 | 29805536 | ID=MS.gene012127.t1.exon1;Parent=MS.gene012127.t1 |
| chr8.4 | CDS | 29805536 | 29805547 | 29805536 | ID=cds.MS.gene012127.t1;Parent=MS.gene012127.t1 |
| chr8.4 | exon | 29805659 | 29805772 | 29805659 | ID=MS.gene012127.t1.exon2;Parent=MS.gene012127.t1 |
| chr8.4 | CDS | 29805659 | 29805772 | 29805659 | ID=cds.MS.gene012127.t1;Parent=MS.gene012127.t1 |
| chr8.4 | exon | 29805923 | 29806028 | 29805923 | ID=MS.gene012127.t1.exon3;Parent=MS.gene012127.t1 |
| chr8.4 | CDS | 29805923 | 29806028 | 29805923 | ID=cds.MS.gene012127.t1;Parent=MS.gene012127.t1 |
| chr8.4 | exon | 29807108 | 29807222 | 29807108 | ID=MS.gene012127.t1.exon4;Parent=MS.gene012127.t1 |
| chr8.4 | CDS | 29807108 | 29807222 | 29807108 | ID=cds.MS.gene012127.t1;Parent=MS.gene012127.t1 |
| chr8.4 | exon | 29807335 | 29807544 | 29807335 | ID=MS.gene012127.t1.exon5;Parent=MS.gene012127.t1 |
| chr8.4 | CDS | 29807335 | 29807544 | 29807335 | ID=cds.MS.gene012127.t1;Parent=MS.gene012127.t1 |
| chr8.4 | exon | 29808198 | 29808486 | 29808198 | ID=MS.gene012127.t1.exon6;Parent=MS.gene012127.t1 |
| chr8.4 | CDS | 29808198 | 29808486 | 29808198 | ID=cds.MS.gene012127.t1;Parent=MS.gene012127.t1 |
| chr8.4 | exon | 29809045 | 29809168 | 29809045 | ID=MS.gene012127.t1.exon7;Parent=MS.gene012127.t1 |
| chr8.4 | CDS | 29809045 | 29809168 | 29809045 | ID=cds.MS.gene012127.t1;Parent=MS.gene012127.t1 |
| chr8.4 | exon | 29809586 | 29809674 | 29809586 | ID=MS.gene012127.t1.exon8;Parent=MS.gene012127.t1 |
| chr8.4 | CDS | 29809586 | 29809674 | 29809586 | ID=cds.MS.gene012127.t1;Parent=MS.gene012127.t1 |
| chr8.4 | exon | 29809938 | 29810006 | 29809938 | ID=MS.gene012127.t1.exon9;Parent=MS.gene012127.t1 |
| chr8.4 | CDS | 29809938 | 29810006 | 29809938 | ID=cds.MS.gene012127.t1;Parent=MS.gene012127.t1 |
| chr8.4 | exon | 29810614 | 29810655 | 29810614 | ID=MS.gene012127.t1.exon10;Parent=MS.gene012127.t1 |
| chr8.4 | CDS | 29810614 | 29810655 | 29810614 | ID=cds.MS.gene012127.t1;Parent=MS.gene012127.t1 |
| Gene Sequence |
| Protein sequence |
