AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44230


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44230.t1 MTR_8g075390 99.743 389 1 0 1 389 1 389 0.0 792
MS.gene44230.t1 MTR_5g022440 81.343 402 56 5 1 389 1 396 0.0 572
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44230.t1 AT4G38630 66.838 389 109 7 1 384 1 374 1.89e-171 484

Find 104 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGTTTCTGCAGCTTCC+TGG 0.182434 8.1:+31750429 MS.gene44230:intron
ATAGGCTACACTTATCATTA+TGG 0.241037 8.1:+31746162 MS.gene44230:intron
TCTTCCTCAGGTCTAGAAAT+AGG 0.241655 8.1:+31747604 MS.gene44230:intron
GTCTACCCCTACCAGTGATT+TGG 0.242788 8.1:+31746489 MS.gene44230:CDS
GCCTCTGCAGGTGGTGTATC+TGG 0.245950 8.1:+31748765 MS.gene44230:CDS
CTCTGTCGGATGTACTTATA+AGG 0.280586 8.1:+31748029 MS.gene44230:CDS
CTTTGTTTCTGCAGCTTCCT+GGG 0.285905 8.1:+31750430 MS.gene44230:intron
CCCATCTGTCAAAGATTTGC+TGG 0.299417 8.1:+31750467 MS.gene44230:CDS
CTCACCGCCTTTCTCCTGTT+TGG 0.299610 8.1:-31748907 None:intergenic
TCTTTGACAGATGGGTCATT+TGG 0.306410 8.1:-31750459 None:intergenic
GCTGCAGCAGCAGCCTCTGC+AGG 0.307628 8.1:+31748753 MS.gene44230:CDS
GCAGGAAGCAGCTGCGAAAA+AGG 0.312036 8.1:+31748869 MS.gene44230:CDS
AAACCTAGCTGCTGCCATTC+AGG 0.316711 8.1:+31747636 MS.gene44230:CDS
GCTAATTCAGGGTCCAAGTT+TGG 0.325391 8.1:-31748807 None:intergenic
TCTACCCCTACCAGTGATTT+GGG 0.334303 8.1:+31746490 MS.gene44230:CDS
CTTTGACAGATGGGTCATTT+GGG 0.350062 8.1:-31750458 None:intergenic
CAGTGATTTGGGCAAAATCT+TGG 0.352937 8.1:+31746501 MS.gene44230:CDS
CTCAGAGCAAGAGCTAATTC+AGG 0.371235 8.1:-31748819 None:intergenic
GGTGTATCTGGATATGATTT+TGG 0.373205 8.1:+31748777 MS.gene44230:CDS
TTTCGCAGCTGCTTCCTGCC+TGG 0.391968 8.1:-31748865 None:intergenic
CAAGAATACTACTCCTCATT+TGG 0.400764 8.1:-31751147 None:intergenic
CAAAACTCGAACTCCCTTCC+CGG 0.405445 8.1:-31746467 None:intergenic
GCTCGGTCATAGTTGCATCC+TGG 0.408251 8.1:-31748944 None:intergenic
AGTACATCCGACAGAGCATT+TGG 0.417933 8.1:-31748022 None:intergenic
TGCCATTCAGGTGGCACAGT+TGG 0.425490 8.1:+31747648 MS.gene44230:CDS
AGTGATTTGGGCAAAATCTT+GGG 0.427099 8.1:+31746502 MS.gene44230:CDS
AAGAAAATGTTGGAGATGAT+TGG 0.430493 8.1:+31747857 MS.gene44230:CDS
GACACTGTTAGTCTTATTTG+CGG 0.431330 8.1:+31746244 MS.gene44230:CDS
CTCGGTCATAGTTGCATCCT+GGG 0.443007 8.1:-31748943 None:intergenic
TGCAGAGGATGCTTCCAAAC+AGG 0.449158 8.1:+31748893 MS.gene44230:CDS
GCAGCAGCAGCCTCTGCAGG+TGG 0.451237 8.1:+31748756 MS.gene44230:CDS
CAATGGAAGAGGAGAGAGCC+AGG 0.451887 8.1:+31748847 MS.gene44230:CDS
GGAAGAGGAGAGAGCCAGGC+AGG 0.467566 8.1:+31748851 MS.gene44230:CDS
TGAGAATGCTCTTCTACAAC+AGG 0.478713 8.1:+31749556 MS.gene44230:CDS
AACTCACCTCGAGCCAACTC+AGG 0.480781 8.1:-31749659 None:intergenic
TGAGGGGAAGACAGAGAAGC+TGG 0.484092 8.1:+31747937 MS.gene44230:CDS
GCACTTGACATTGTCAACTT+TGG 0.484613 8.1:+31747905 MS.gene44230:CDS
TCTTGCTCTGAGAGTTTCAA+TGG 0.484864 8.1:+31748830 MS.gene44230:CDS
GGACGAAGTGACTAGATTGT+TGG 0.487197 8.1:+31750123 MS.gene44230:CDS
TATTTGCGGTGCTAAAACTC+AGG 0.487975 8.1:+31746258 MS.gene44230:CDS
AGCTTCTGTACTGGTTCGCT+CGG 0.490367 8.1:-31748961 None:intergenic
CATAGGCTCAGCTTCTGTAC+TGG 0.491628 8.1:-31748970 None:intergenic
TCGAACTCCCTTCCCGGCCA+TGG 0.492622 8.1:-31746461 None:intergenic
TCTAATCCTGAAAATACTGT+TGG 0.499375 8.1:+31746430 MS.gene44230:CDS
GATCATCCATTGACATTGCA+AGG 0.500246 8.1:-31749580 None:intergenic
ACCTGGTCCAAATGCTCTGT+CGG 0.502391 8.1:+31748015 MS.gene44230:CDS
TCTGAGAGTTTCAATGGAAG+AGG 0.510357 8.1:+31748836 MS.gene44230:CDS
ACAGGCCCTTGCAATGTCAA+TGG 0.511218 8.1:+31749574 MS.gene44230:CDS
CAGTACAGAAGCTGAGCCTA+TGG 0.512282 8.1:+31748971 MS.gene44230:CDS
CAAGCATGAGAAGAAAATGT+TGG 0.513604 8.1:+31747847 MS.gene44230:CDS
GCCAGCAAATCTTTGACAGA+TGG 0.519859 8.1:-31750468 None:intergenic
AGCCAACTGTGCCACCTGAA+TGG 0.521804 8.1:-31747650 None:intergenic
TTTACTGGTGATGGAGAAGG+TGG 0.527650 8.1:+31748714 MS.gene44230:CDS
CTTCCATCATGGTTAACTGC+AGG 0.530356 8.1:-31749602 None:intergenic
GTTATGACCATGGCCGGGAA+GGG 0.531594 8.1:+31746454 MS.gene44230:CDS
AAAATCTTGGGTTGTATGCA+TGG 0.533026 8.1:+31746514 MS.gene44230:CDS
GGGTCATTTGGGTCAACCCC+AGG 0.533244 8.1:-31750447 None:intergenic
TCAGAGCAAGAGCTAATTCA+GGG 0.536745 8.1:-31748818 None:intergenic
TTTGTTTCTGCAGCTTCCTG+GGG 0.540653 8.1:+31750431 MS.gene44230:intron
GATGCTTCCAAACAGGAGAA+AGG 0.543596 8.1:+31748900 MS.gene44230:CDS
CACATGGTTCATGTTCCACC+TGG 0.545946 8.1:+31747998 MS.gene44230:CDS
CACAGTTGGCTCTTAAGCAT+CGG 0.549170 8.1:+31747662 MS.gene44230:CDS
GTTGGAGTTATGACCATGGC+CGG 0.550710 8.1:+31746448 MS.gene44230:CDS
TGAAGAGGAGGGACCAAATG+AGG 0.554105 8.1:+31751134 MS.gene44230:CDS
AGAATAAGAAGCAGCAGCAA+AGG 0.554704 8.1:+31747686 MS.gene44230:CDS
CCAGCAAATCTTTGACAGAT+GGG 0.555521 8.1:-31750467 None:intergenic
CCACCTGAATGGCAGCAGCT+AGG 0.557823 8.1:-31747639 None:intergenic
TTTGCCCAAATCACTGGTAG+GGG 0.564614 8.1:-31746494 None:intergenic
CATTATTGTTTACAGCTGCA+AGG 0.566431 8.1:-31747967 None:intergenic
AGTTATGACCATGGCCGGGA+AGG 0.571550 8.1:+31746453 MS.gene44230:CDS
AGCTACAGATGACCCTGAGT+TGG 0.581144 8.1:+31749646 MS.gene44230:CDS
TATCTGCATCTCTTCCATCA+TGG 0.583898 8.1:-31749613 None:intergenic
CAACTTTGGAGAAGAAGATG+AGG 0.586931 8.1:+31747919 MS.gene44230:CDS
CTTTCCAACAATGGTGCTCG+AGG 0.591593 8.1:+31746033 None:intergenic
GGTGATGGAGAAGGTGGAAG+CGG 0.592077 8.1:+31748720 MS.gene44230:CDS
TGAGCAGCAAGCTACTTCCC+AGG 0.598003 8.1:+31748926 MS.gene44230:CDS
AACTTTGGAGAAGAAGATGA+GGG 0.598180 8.1:+31747920 MS.gene44230:CDS
GATCCTGCAGTTAACCATGA+TGG 0.599212 8.1:+31749599 MS.gene44230:CDS
CGAAGTGACTAGATTGTTGG+CGG 0.599863 8.1:+31750126 MS.gene44230:CDS
TCATAAGAAGAATGAAGAGG+AGG 0.601911 8.1:+31751122 MS.gene44230:CDS
ACTCACCTCGAGCCAACTCA+GGG 0.602418 8.1:-31749658 None:intergenic
TCCAGATACACCACCTGCAG+AGG 0.602692 8.1:-31748766 None:intergenic
TTGGAGTTATGACCATGGCC+GGG 0.605725 8.1:+31746449 MS.gene44230:CDS
AACTCTGAACATATGCGTAA+CGG 0.612049 8.1:+31746187 MS.gene44230:CDS
TCCGACAGAGCATTTGGACC+AGG 0.615302 8.1:-31748016 None:intergenic
CAATCTAGTCACTTCGTCCG+TGG 0.621703 8.1:-31750119 None:intergenic
TTATCAGACATACTGTTGCA+AGG 0.624899 8.1:-31750171 None:intergenic
ATCATCCATTGACATTGCAA+GGG 0.626501 8.1:-31749579 None:intergenic
CATAAGAAGAATGAAGAGGA+GGG 0.627494 8.1:+31751123 MS.gene44230:CDS
GGCTCATAAGAAGAATGAAG+AGG 0.636641 8.1:+31751119 MS.gene44230:intron
CAATAATGATAGTAGCCACA+TGG 0.640045 8.1:+31747982 MS.gene44230:CDS
TGCAAGGACATGAGATACAA+AGG 0.642470 8.1:-31750155 None:intergenic
CCTAGCTGCTGCCATTCAGG+TGG 0.642995 8.1:+31747639 MS.gene44230:CDS
TCTAGTCACTTCGTCCGTGG+TGG 0.650322 8.1:-31750116 None:intergenic
GATGACCCTGAGTTGGCTCG+AGG 0.650651 8.1:+31749653 MS.gene44230:CDS
GATTGAGCTTGAAATCGAGA+AGG 0.652006 8.1:-31746220 None:intergenic
GCAAATAAGACTAACAGTGT+CGG 0.657951 8.1:-31746242 None:intergenic
GACAGAGCATTTGGACCAGG+TGG 0.676689 8.1:-31748013 None:intergenic
TACTGTTGGAGTTATGACCA+TGG 0.686072 8.1:+31746444 MS.gene44230:CDS
TCCTCAGGTCTAGAAATAGG+CGG 0.696316 8.1:+31747607 MS.gene44230:intron
ACTTTGGAGAAGAAGATGAG+GGG 0.698383 8.1:+31747921 MS.gene44230:CDS
GCTTCCAAACAGGAGAAAGG+CGG 0.712590 8.1:+31748903 MS.gene44230:CDS
GTCAGTATCAGACACCACCA+CGG 0.720202 8.1:+31750102 MS.gene44230:CDS
CAGGTGGAACATGAACCATG+TGG 0.807488 8.1:-31747997 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATTTAAATGTATTAG+TGG + chr8.1:31750206-31750225 MS.gene44230:intron 10.0%
!!! TATTTTTTTTGCTTTTTAAA+TGG + chr8.1:31750855-31750874 MS.gene44230:intron 10.0%
!! AAAATAAATATATGCTTAAG+CGG + chr8.1:31750812-31750831 MS.gene44230:intron 15.0%
!! AAAGGCTATATATATATATA+AGG - chr8.1:31748413-31748432 None:intergenic 15.0%
!! ATGAATTTATCAGATTATAA+AGG - chr8.1:31748630-31748649 None:intergenic 15.0%
!! TTATATATATATATAGCCTT+TGG + chr8.1:31748412-31748431 MS.gene44230:intron 15.0%
!!! CATTAATCTTTGATTTTAAT+AGG + chr8.1:31746144-31746163 MS.gene44230:intron 15.0%
!!! GATAACAATTGTATTAATTT+TGG + chr8.1:31749812-31749831 MS.gene44230:intron 15.0%
!!! TATGTTTAATTTTAGGTTTA+GGG + chr8.1:31746364-31746383 MS.gene44230:intron 15.0%
!!! TCTTAGTTTATTTTTTTGTT+TGG + chr8.1:31749860-31749879 MS.gene44230:intron 15.0%
!!! TGGTTTTTATGTTTAATTTT+AGG + chr8.1:31746357-31746376 MS.gene44230:intron 15.0%
!!! TTATGTTTAATTTTAGGTTT+AGG + chr8.1:31746363-31746382 MS.gene44230:intron 15.0%
!! AAAAGAAAAAAAAACACTTG+GGG - chr8.1:31746923-31746942 None:intergenic 20.0%
!! AAATGAATAAATAACACTTG+GGG - chr8.1:31747043-31747062 None:intergenic 20.0%
!! AATTTATCAGATTATAAAGG+AGG - chr8.1:31748627-31748646 None:intergenic 20.0%
!! ACAAATGAATAAATAACACT+TGG - chr8.1:31747045-31747064 None:intergenic 20.0%
!! AGAAACAAAGAATTATTACT+CGG - chr8.1:31750420-31750439 None:intergenic 20.0%
!! AGATTAGAGGAAAATAAAAT+CGG - chr8.1:31746067-31746086 None:intergenic 20.0%
!! ATATATATATATAAGGTGGA+TGG - chr8.1:31748406-31748425 None:intergenic 20.0%
!! ATGAAAGATTTGACATTTAA+AGG - chr8.1:31748334-31748353 None:intergenic 20.0%
!! ATTAGTTATTGTAAATGCTA+TGG + chr8.1:31749241-31749260 MS.gene44230:intron 20.0%
!! ATTTATCAGATTATAAAGGA+GGG - chr8.1:31748626-31748645 None:intergenic 20.0%
!! CAAATGAATAAATAACACTT+GGG - chr8.1:31747044-31747063 None:intergenic 20.0%
!! GAAAAGAAAAAAAAACACTT+GGG - chr8.1:31746924-31746943 None:intergenic 20.0%
!! TAAGTAAATTCTATGTGAAT+TGG + chr8.1:31747086-31747105 MS.gene44230:intron 20.0%
!! TGAAAAGAAAAAAAAACACT+TGG - chr8.1:31746925-31746944 None:intergenic 20.0%
!! TTAGTTATTGTAAATGCTAT+GGG + chr8.1:31749242-31749261 MS.gene44230:intron 20.0%
!! TTCATAGAAAATGTTAATGT+TGG + chr8.1:31750557-31750576 MS.gene44230:intron 20.0%
!!! AGTGTTGTTAAATACTTAAA+TGG + chr8.1:31750230-31750249 MS.gene44230:intron 20.0%
!!! ATTTTTTCAAATCGAACTAT+TGG + chr8.1:31751036-31751055 MS.gene44230:intron 20.0%
!!! CTTTATTTTATCTTTCGATA+TGG - chr8.1:31746728-31746747 None:intergenic 20.0%
!!! TCTTTTTCTAAATTTGTACA+CGG + chr8.1:31748083-31748102 MS.gene44230:intron 20.0%
!!! TGATTCTAAGCAATTTTTTA+GGG + chr8.1:31746308-31746327 MS.gene44230:intron 20.0%
!!! TTGATTCTAAGCAATTTTTT+AGG + chr8.1:31746307-31746326 MS.gene44230:intron 20.0%
!!! TTTTTTTCCTCTTAAATCTT+TGG + chr8.1:31746543-31746562 MS.gene44230:intron 20.0%
! AAAAGAGTTAGAAGAGAAAT+AGG - chr8.1:31748205-31748224 None:intergenic 25.0%
! AAATATTACACTTTCATCTG+GGG + chr8.1:31747467-31747486 MS.gene44230:intron 25.0%
! AGAAAAGAATAATACTAGAG+GGG - chr8.1:31748537-31748556 None:intergenic 25.0%
! AGAAATATTACACTTTCATC+TGG + chr8.1:31747465-31747484 MS.gene44230:intron 25.0%
! ATGAAAAAGACGTTATTCAT+TGG - chr8.1:31749336-31749355 None:intergenic 25.0%
! CATTTGTACAATTAAGTACA+AGG + chr8.1:31747058-31747077 MS.gene44230:intron 25.0%
! GAAATATTACACTTTCATCT+GGG + chr8.1:31747466-31747485 MS.gene44230:intron 25.0%
! GAGAAAAGAATAATACTAGA+GGG - chr8.1:31748538-31748557 None:intergenic 25.0%
! GGCTATATATATATATAAGG+TGG - chr8.1:31748410-31748429 None:intergenic 25.0%
! GTAAATGACATATTCAAATG+TGG + chr8.1:31750941-31750960 MS.gene44230:intron 25.0%
! GTTGTTAAATACTTAAATGG+CGG + chr8.1:31750233-31750252 MS.gene44230:intron 25.0%
! TAAAATGATAAGAAGCCAAA+AGG - chr8.1:31747385-31747404 None:intergenic 25.0%
! TAACTAATAACACAAACCAT+AGG - chr8.1:31748990-31749009 None:intergenic 25.0%
! TAAGAACTAACTTCTAACAT+AGG - chr8.1:31749755-31749774 None:intergenic 25.0%
! TAATAAAAGAAGACTTACGT+TGG - chr8.1:31750511-31750530 None:intergenic 25.0%
! TAGAATCAAGAATTAAGCAT+TGG - chr8.1:31746296-31746315 None:intergenic 25.0%
! TATATATTGCATTTCAGACT+TGG + chr8.1:31746337-31746356 MS.gene44230:intron 25.0%
! TCTGTATAATTTAAACCACA+TGG - chr8.1:31749218-31749237 None:intergenic 25.0%
! TGAGAAAAGAATAATACTAG+AGG - chr8.1:31748539-31748558 None:intergenic 25.0%
! TTTCCTTATTCAGTATAAGT+TGG + chr8.1:31750659-31750678 MS.gene44230:intron 25.0%
!! AAAGCACCAAATTAGATTAT+GGG - chr8.1:31747814-31747833 None:intergenic 25.0%
!! AAAGTACTTAGAATATATGC+TGG - chr8.1:31749194-31749213 None:intergenic 25.0%
!! ACAAAGTTAACTGATTCAAA+CGG - chr8.1:31749415-31749434 None:intergenic 25.0%
!! AGTTCGATTTGAAAAAATGT+TGG - chr8.1:31751034-31751053 None:intergenic 25.0%
!! ATTGACTTATTTGAGCTTAT+CGG + chr8.1:31747160-31747179 MS.gene44230:intron 25.0%
!! ATTGAGTTGTTTATCCAAAT+AGG + chr8.1:31747345-31747364 MS.gene44230:intron 25.0%
!! ATTGTTTTCATAAGCTATCA+TGG - chr8.1:31747278-31747297 None:intergenic 25.0%
!! ATTTCTCTTCTAACTCTTTT+TGG + chr8.1:31748205-31748224 MS.gene44230:intron 25.0%
!! GTTCGATTTGAAAAAATGTT+GGG - chr8.1:31751033-31751052 None:intergenic 25.0%
!! TAAAGCACCAAATTAGATTA+TGG - chr8.1:31747815-31747834 None:intergenic 25.0%
!! TCTATGTGAATTGGATTTTT+AGG + chr8.1:31747095-31747114 MS.gene44230:intron 25.0%
!! TCTTATCATTTTAGATGCAT+CGG + chr8.1:31747392-31747411 MS.gene44230:intron 25.0%
!! TTGTTGGTGGAATTTATATA+TGG + chr8.1:31750742-31750761 MS.gene44230:intron 25.0%
!! TTTTATTAGCAAATACCACT+GGG + chr8.1:31750523-31750542 MS.gene44230:intron 25.0%
!!! AATGAATAACGTCTTTTTCA+TGG + chr8.1:31749335-31749354 MS.gene44230:intron 25.0%
!!! ATGAATAACGTCTTTTTCAT+GGG + chr8.1:31749336-31749355 MS.gene44230:intron 25.0%
!!! CATTTTGCAGTTTTTTTGTT+TGG + chr8.1:31749376-31749395 MS.gene44230:intron 25.0%
!!! GATTTTTTTAAAACTGCCAT+AGG + chr8.1:31750269-31750288 MS.gene44230:intron 25.0%
!!! GCTTATTTTTTAAGTTCTCT+AGG - chr8.1:31746793-31746812 None:intergenic 25.0%
!!! GTATTTTGTTTGTTTCTTGA+GGG + chr8.1:31748564-31748583 MS.gene44230:intron 25.0%
!!! GTTCTAAAAAATCATTCCAT+AGG - chr8.1:31750717-31750736 None:intergenic 25.0%
!!! TAATTTTGGTTCAAACAAGA+GGG + chr8.1:31749826-31749845 MS.gene44230:intron 25.0%
!!! TGTATTTTGTTTGTTTCTTG+AGG + chr8.1:31748563-31748582 MS.gene44230:intron 25.0%
!!! TTAATTTTGGTTCAAACAAG+AGG + chr8.1:31749825-31749844 MS.gene44230:intron 25.0%
!!! TTTATTCATTTTTCTTCCTC+AGG + chr8.1:31747592-31747611 MS.gene44230:intron 25.0%
!!! TTTTGCTTTTTAAATGGTGA+AGG + chr8.1:31750861-31750880 MS.gene44230:intron 25.0%
!!! TTTTTTAGAACCATAGTTGT+TGG + chr8.1:31750726-31750745 MS.gene44230:intron 25.0%
AAAAGAATAATACTAGAGGG+GGG - chr8.1:31748535-31748554 None:intergenic 30.0%
AAAGAAACTATGGTCCTATT+TGG - chr8.1:31747362-31747381 None:intergenic 30.0%
AAGAAAATGTTGGAGATGAT+TGG + chr8.1:31747857-31747876 MS.gene44230:CDS 30.0%
AATGTTGGCATGATTGAATT+TGG + chr8.1:31750572-31750591 MS.gene44230:intron 30.0%
ACTCATGTCTAGATGAATAA+TGG - chr8.1:31749704-31749723 None:intergenic 30.0%
AGTCCAACTTATACTGAATA+AGG - chr8.1:31750665-31750684 None:intergenic 30.0%
ATAAATTCCACCAACAACTA+TGG - chr8.1:31750739-31750758 None:intergenic 30.0%
ATAGGCTACACTTATCATTA+TGG + chr8.1:31746162-31746181 MS.gene44230:intron 30.0%
ATTGAATCGATGAAGATTAG+AGG - chr8.1:31746080-31746099 None:intergenic 30.0%
ATTTATGTTACCTTGTGTTG+TGG + chr8.1:31748678-31748697 MS.gene44230:intron 30.0%
CCATAAAGACTGATAACAAA+TGG - chr8.1:31749117-31749136 None:intergenic 30.0%
CTAGTAGATAAGCTCAAATA+AGG + chr8.1:31747004-31747023 MS.gene44230:intron 30.0%
CTCACTCAAATTATTTAGCA+AGG - chr8.1:31750792-31750811 None:intergenic 30.0%
GAAAAGAATAATACTAGAGG+GGG - chr8.1:31748536-31748555 None:intergenic 30.0%
GAAACAAGTTTACATCGTAT+TGG + chr8.1:31747548-31747567 MS.gene44230:intron 30.0%
GACAAAACAGGTAACAAAAA+TGG - chr8.1:31749019-31749038 None:intergenic 30.0%
GATGTACTTATAAGGTTTGT+GGG + chr8.1:31748037-31748056 MS.gene44230:intron 30.0%
TCTAATCCTGAAAATACTGT+TGG + chr8.1:31746430-31746449 MS.gene44230:CDS 30.0%
TGACAATCAAAACAAAGCAA+AGG - chr8.1:31749041-31749060 None:intergenic 30.0%
TTATGATTGTATTGTCCATC+AGG + chr8.1:31751098-31751117 MS.gene44230:intron 30.0%
! AGTTTTTATAGAAGGAAGGA+AGG - chr8.1:31748602-31748621 None:intergenic 30.0%
! ATAACTCCAACAGTATTTTC+AGG - chr8.1:31746439-31746458 None:intergenic 30.0%
! ATTCTAAGTACTTTTCCATG+TGG + chr8.1:31749200-31749219 MS.gene44230:intron 30.0%
! ATTTCTTGTCTTTTGTTGCT+TGG + chr8.1:31750067-31750086 MS.gene44230:intron 30.0%
! CTTTTATTAGCAAATACCAC+TGG + chr8.1:31750522-31750541 MS.gene44230:intron 30.0%
! TTTGACATTTAAAGGAGTAC+TGG - chr8.1:31748326-31748345 None:intergenic 30.0%
! TTTGTTATCAGTCTTTATGG+AGG + chr8.1:31749117-31749136 MS.gene44230:intron 30.0%
!! CCATTTGTTATCAGTCTTTA+TGG + chr8.1:31749114-31749133 MS.gene44230:intron 30.0%
!! TCAAGAATTAAGCATTGGAT+TGG - chr8.1:31746291-31746310 None:intergenic 30.0%
!! TTTTGTTTGGTGATCTAGAT+GGG + chr8.1:31749873-31749892 MS.gene44230:intron 30.0%
!! TTTTTGTTTGGTGATCTAGA+TGG + chr8.1:31749872-31749891 MS.gene44230:intron 30.0%
!!! CTTCTAAAATTTTACCGAAC+AGG - chr8.1:31748132-31748151 None:intergenic 30.0%
!!! TGAATTGGATTTTTAGGTTG+TGG + chr8.1:31747101-31747120 MS.gene44230:intron 30.0%
AACAAAGCAAAGGACAAAAC+AGG - chr8.1:31749031-31749050 None:intergenic 35.0%
AACTCTGAACATATGCGTAA+CGG + chr8.1:31746187-31746206 MS.gene44230:CDS 35.0%
AATCTGGTTACAATGTAGGA+TGG + chr8.1:31746604-31746623 MS.gene44230:intron 35.0%
AATGTAGCAAACAACTCCAA+AGG - chr8.1:31748431-31748450 None:intergenic 35.0%
ACAGGAAATCCCAATTCAAA+TGG - chr8.1:31748114-31748133 None:intergenic 35.0%
ACCAAATTAGATTATGGGAG+GGG - chr8.1:31747809-31747828 None:intergenic 35.0%
ACCCTCAAAAAACTATGAGT+TGG - chr8.1:31749951-31749970 None:intergenic 35.0%
ACTAGTACTGCAACATGATA+CGG - chr8.1:31749476-31749495 None:intergenic 35.0%
AGAGGAAAATAAAATCGGAG+AGG - chr8.1:31746062-31746081 None:intergenic 35.0%
AGCCAAAAGGAAAGAAACTA+TGG - chr8.1:31747372-31747391 None:intergenic 35.0%
AGGAAATCTGGTTACAATGT+AGG + chr8.1:31746600-31746619 MS.gene44230:intron 35.0%
ATAAGTGCTCTATGCTATGT+TGG + chr8.1:31746577-31746596 MS.gene44230:intron 35.0%
ATCATCCATTGACATTGCAA+GGG - chr8.1:31749582-31749601 None:intergenic 35.0%
ATCCCTTCAAAAATTGCCTA+TGG - chr8.1:31750288-31750307 None:intergenic 35.0%
ATGTTGCATGATGATTGATC+TGG + chr8.1:31749777-31749796 MS.gene44230:intron 35.0%
CAAGCATGAGAAGAAAATGT+TGG + chr8.1:31747847-31747866 MS.gene44230:CDS 35.0%
CAATAATGATAGTAGCCACA+TGG + chr8.1:31747982-31748001 MS.gene44230:CDS 35.0%
CACCAAATTAGATTATGGGA+GGG - chr8.1:31747810-31747829 None:intergenic 35.0%
CACTGCAATTCGATCAATTA+GGG + chr8.1:31746105-31746124 MS.gene44230:intron 35.0%
CAGGAAATCCCAATTCAAAT+GGG - chr8.1:31748113-31748132 None:intergenic 35.0%
CATAAGAAGAATGAAGAGGA+GGG + chr8.1:31751123-31751142 MS.gene44230:CDS 35.0%
CATGACTCATGCACTAATAT+GGG + chr8.1:31749088-31749107 MS.gene44230:intron 35.0%
CATTATTGTTTACAGCTGCA+AGG - chr8.1:31747970-31747989 None:intergenic 35.0%
CTCAAATAAGCCAATCCAAA+TGG + chr8.1:31746896-31746915 MS.gene44230:intron 35.0%
GAAAAATGCAACATCTCCAA+GGG - chr8.1:31749161-31749180 None:intergenic 35.0%
GAAGAATTCATGGCTATTTG+GGG - chr8.1:31748304-31748323 None:intergenic 35.0%
GCAAATAAGACTAACAGTGT+CGG - chr8.1:31746245-31746264 None:intergenic 35.0%
GCTATAAGCTGCAAATTATG+CGG - chr8.1:31746664-31746683 None:intergenic 35.0%
GGAAGAATTCATGGCTATTT+GGG - chr8.1:31748305-31748324 None:intergenic 35.0%
GGATGTACTTATAAGGTTTG+TGG + chr8.1:31748036-31748055 MS.gene44230:intron 35.0%
GGTATCACTTCATTGAACAT+GGG + chr8.1:31749894-31749913 MS.gene44230:intron 35.0%
TATTAGTGCATGAGTCATGA+TGG - chr8.1:31749087-31749106 None:intergenic 35.0%
TCATAAGAAGAATGAAGAGG+AGG + chr8.1:31751122-31751141 MS.gene44230:CDS 35.0%
TCATGACTCATGCACTAATA+TGG + chr8.1:31749087-31749106 MS.gene44230:intron 35.0%
TCTCCATCACCAGTAAAAAT+AGG - chr8.1:31748711-31748730 None:intergenic 35.0%
TGGAAGAATTCATGGCTATT+TGG - chr8.1:31748306-31748325 None:intergenic 35.0%
TTATCAGACATACTGTTGCA+AGG - chr8.1:31750174-31750193 None:intergenic 35.0%
TTGAATTGGGATTTCCTGTT+CGG + chr8.1:31748115-31748134 MS.gene44230:intron 35.0%
TTTATAGAAGGAAGGAAGGA+AGG - chr8.1:31748598-31748617 None:intergenic 35.0%
TTTATTTGCGCGAAACTTCT+GGG + chr8.1:31748653-31748672 MS.gene44230:intron 35.0%
! AAAATCTTGGGTTGTATGCA+TGG + chr8.1:31746514-31746533 MS.gene44230:CDS 35.0%
! AACTGATTCAAACGGAAATC+AGG - chr8.1:31749407-31749426 None:intergenic 35.0%
! AACTTTGGAGAAGAAGATGA+GGG + chr8.1:31747920-31747939 MS.gene44230:CDS 35.0%
! AGGAGGGAAGTTTTTATAGA+AGG - chr8.1:31748610-31748629 None:intergenic 35.0%
! AGTGATTTGGGCAAAATCTT+GGG + chr8.1:31746502-31746521 MS.gene44230:CDS 35.0%
! ATTTTCTTCTCATGCTTGAC+AGG - chr8.1:31747845-31747864 None:intergenic 35.0%
! CAAAGGATTGTTGTCTTTTG+TGG + chr8.1:31747703-31747722 MS.gene44230:CDS 35.0%
! GACCATAGTTTCTTTCCTTT+TGG + chr8.1:31747367-31747386 MS.gene44230:intron 35.0%
! GATTTTTACATCCGAGTCTT+GGG + chr8.1:31748453-31748472 MS.gene44230:intron 35.0%
! GGGAAGTTTTTATAGAAGGA+AGG - chr8.1:31748606-31748625 None:intergenic 35.0%
! GGTGTATCTGGATATGATTT+TGG + chr8.1:31748777-31748796 MS.gene44230:CDS 35.0%
! TCACTTAAAGCACCATATAG+AGG - chr8.1:31750898-31750917 None:intergenic 35.0%
! TGATTTTTACATCCGAGTCT+TGG + chr8.1:31748452-31748471 MS.gene44230:intron 35.0%
! TGCCATAGGCAATTTTTGAA+GGG + chr8.1:31750283-31750302 MS.gene44230:intron 35.0%
! TTTAGAACCATAGTTGTTGG+TGG + chr8.1:31750729-31750748 MS.gene44230:intron 35.0%
!! ATCTGGATATGATTTTGGTG+TGG + chr8.1:31748782-31748801 MS.gene44230:CDS 35.0%
!! GACACTGTTAGTCTTATTTG+CGG + chr8.1:31746244-31746263 MS.gene44230:CDS 35.0%
!! GAGAGTACCAAAGATTTAAG+AGG - chr8.1:31746553-31746572 None:intergenic 35.0%
!!! ACACCTATTTTTACTGGTGA+TGG + chr8.1:31748705-31748724 MS.gene44230:CDS 35.0%
!!! AGCCAACTCATAGTTTTTTG+AGG + chr8.1:31749946-31749965 MS.gene44230:intron 35.0%
!!! ATTTTTACTGGTGATGGAGA+AGG + chr8.1:31748711-31748730 MS.gene44230:CDS 35.0%
!!! CTCATAGTTTTTTGAGGGTT+TGG + chr8.1:31749952-31749971 MS.gene44230:intron 35.0%
!!! GCCAACTCATAGTTTTTTGA+GGG + chr8.1:31749947-31749966 MS.gene44230:intron 35.0%
AAAAACACTTGGGGTCCATT+TGG - chr8.1:31746914-31746933 None:intergenic 40.0%
AACAGTCTCACAAGTGCTTA+TGG + chr8.1:31746862-31746881 MS.gene44230:intron 40.0%
AACATCTCCAAGGGTAGTTA+TGG - chr8.1:31749152-31749171 None:intergenic 40.0%
AAGCACTTGTGAGACTGTTT+GGG - chr8.1:31746861-31746880 None:intergenic 40.0%
AATATATGCTGGTGAGCCAA+CGG - chr8.1:31749183-31749202 None:intergenic 40.0%
AATTATGCGGTTGTCGAAAC+AGG - chr8.1:31746651-31746670 None:intergenic 40.0%
AATTGATCGAATTGCAGTGG+AGG - chr8.1:31746104-31746123 None:intergenic 40.0%
ACAACTTATCCCAGAAGAGA+AGG - chr8.1:31750001-31750020 None:intergenic 40.0%
ACATCTCCAAGGGTAGTTAT+GGG - chr8.1:31749151-31749170 None:intergenic 40.0%
ACGGCATTCCCATTTGAATT+GGG + chr8.1:31748102-31748121 MS.gene44230:intron 40.0%
ACTTATTTGAGCTTATCGGC+TGG + chr8.1:31747164-31747183 MS.gene44230:intron 40.0%
AGAATAAGAAGCAGCAGCAA+AGG + chr8.1:31747686-31747705 MS.gene44230:CDS 40.0%
ATGCTATGTTGGAGGAAATC+TGG + chr8.1:31746588-31746607 MS.gene44230:intron 40.0%
ATGGAGCTCAAAATCAATCC+AGG - chr8.1:31750603-31750622 None:intergenic 40.0%
ATTACACTTTCATCTGGGGA+TGG + chr8.1:31747471-31747490 MS.gene44230:intron 40.0%
CATTCTTCTTATGAGCCTGA+TGG - chr8.1:31751116-31751135 None:intergenic 40.0%
CCACTGCAATTCGATCAATT+AGG + chr8.1:31746104-31746123 MS.gene44230:intron 40.0%
CCAGCAAATCTTTGACAGAT+GGG - chr8.1:31750470-31750489 None:intergenic 40.0%
CCTAATTGATCGAATTGCAG+TGG - chr8.1:31746107-31746126 None:intergenic 40.0%
CCTAGAGATGAAAACAACCA+TGG - chr8.1:31748486-31748505 None:intergenic 40.0%
CTCTGTCGGATGTACTTATA+AGG + chr8.1:31748029-31748048 MS.gene44230:CDS 40.0%
CTTTGACAGATGGGTCATTT+GGG - chr8.1:31750461-31750480 None:intergenic 40.0%
GAATAGTTGCCTTCTCTTCT+GGG + chr8.1:31749989-31750008 MS.gene44230:intron 40.0%
GATCATCCATTGACATTGCA+AGG - chr8.1:31749583-31749602 None:intergenic 40.0%
GATTGAGCTTGAAATCGAGA+AGG - chr8.1:31746223-31746242 None:intergenic 40.0%
GCAAATACCACTGGGTTTAA+AGG + chr8.1:31750531-31750550 MS.gene44230:intron 40.0%
GCACCAAATTAGATTATGGG+AGG - chr8.1:31747811-31747830 None:intergenic 40.0%
GCACTTGACATTGTCAACTT+TGG + chr8.1:31747905-31747924 MS.gene44230:CDS 40.0%
GGAAAAATGCAACATCTCCA+AGG - chr8.1:31749162-31749181 None:intergenic 40.0%
GGCTCATAAGAAGAATGAAG+AGG + chr8.1:31751119-31751138 MS.gene44230:intron 40.0%
GGGTATCACTTCATTGAACA+TGG + chr8.1:31749893-31749912 MS.gene44230:intron 40.0%
GGTATAAGCACTTGTGAGAT+AGG + chr8.1:31747185-31747204 MS.gene44230:intron 40.0%
GTAAAGAGAGAGCCTCTATA+TGG + chr8.1:31750883-31750902 MS.gene44230:intron 40.0%
GTTTATTTGCGCGAAACTTC+TGG + chr8.1:31748652-31748671 MS.gene44230:intron 40.0%
TAAGCACTTGTGAGACTGTT+TGG - chr8.1:31746862-31746881 None:intergenic 40.0%
TACTGTTGGAGTTATGACCA+TGG + chr8.1:31746444-31746463 MS.gene44230:CDS 40.0%
TAGGCAGAGTTGAGTAGAAA+CGG - chr8.1:31748186-31748205 None:intergenic 40.0%
TATCTGCATCTCTTCCATCA+TGG - chr8.1:31749616-31749635 None:intergenic 40.0%
TCAAATAAGGCAATCCAAGC+AGG + chr8.1:31747017-31747036 MS.gene44230:intron 40.0%
TCAGAGCAAGAGCTAATTCA+GGG - chr8.1:31748821-31748840 None:intergenic 40.0%
TCCCCTCCCATAATCTAATT+TGG + chr8.1:31747805-31747824 MS.gene44230:intron 40.0%
TCTGAGAGTTTCAATGGAAG+AGG + chr8.1:31748836-31748855 MS.gene44230:CDS 40.0%
TCTGTATTGTCGTCTACCTA+TGG + chr8.1:31750698-31750717 MS.gene44230:intron 40.0%
TCTTCCTCAGGTCTAGAAAT+AGG + chr8.1:31747604-31747623 MS.gene44230:intron 40.0%
TCTTTGACAGATGGGTCATT+TGG - chr8.1:31750462-31750481 None:intergenic 40.0%
TGAACATGGGATGCTTTGTA+TGG + chr8.1:31749907-31749926 MS.gene44230:intron 40.0%
TGAAGTTCCTTTAAACCCAG+TGG - chr8.1:31750541-31750560 None:intergenic 40.0%
TGAATAGTTGCCTTCTCTTC+TGG + chr8.1:31749988-31750007 MS.gene44230:intron 40.0%
TGAGAATGCTCTTCTACAAC+AGG + chr8.1:31749556-31749575 MS.gene44230:CDS 40.0%
TGCAAGGACATGAGATACAA+AGG - chr8.1:31750158-31750177 None:intergenic 40.0%
TGGTTACAATGTAGGATGGT+GGG + chr8.1:31746608-31746627 MS.gene44230:intron 40.0%
TGTAAATGCTATGGGTACAG+AGG + chr8.1:31749250-31749269 MS.gene44230:intron 40.0%
TGTCATTCCACTAATCAGTG+TGG - chr8.1:31750381-31750400 None:intergenic 40.0%
TTACATCCCATAACTACCCT+TGG + chr8.1:31749142-31749161 MS.gene44230:intron 40.0%
TTGTCAGGTTCTGCTATCTA+GGG + chr8.1:31747128-31747147 MS.gene44230:intron 40.0%
TTTGTCAGGTTCTGCTATCT+AGG + chr8.1:31747127-31747146 MS.gene44230:intron 40.0%
! ACTTTGGAGAAGAAGATGAG+GGG + chr8.1:31747921-31747940 MS.gene44230:CDS 40.0%
! ATTTTGCCCAAATCACTGGT+AGG - chr8.1:31746499-31746518 None:intergenic 40.0%
! CAACTTTGGAGAAGAAGATG+AGG + chr8.1:31747919-31747938 MS.gene44230:CDS 40.0%
! CAAGATTTTGCCCAAATCAC+TGG - chr8.1:31746503-31746522 None:intergenic 40.0%
! CAGTGATTTGGGCAAAATCT+TGG + chr8.1:31746501-31746520 MS.gene44230:CDS 40.0%
! CATGATGATTGATCTGGTTC+TGG + chr8.1:31749783-31749802 MS.gene44230:intron 40.0%
! CTGCCATAGGCAATTTTTGA+AGG + chr8.1:31750282-31750301 MS.gene44230:intron 40.0%
! GAGATGTTGCATTTTTCCGT+TGG + chr8.1:31749164-31749183 MS.gene44230:intron 40.0%
! GGATTGTTGTCTTTTGTGGA+AGG + chr8.1:31747707-31747726 MS.gene44230:CDS 40.0%
! TATTTGCGGTGCTAAAACTC+AGG + chr8.1:31746258-31746277 MS.gene44230:CDS 40.0%
! TCTGCTATCTAGGGTCTATT+TGG + chr8.1:31747137-31747156 MS.gene44230:intron 40.0%
! TGATTGAATTTGGCTTCACC+TGG + chr8.1:31750582-31750601 MS.gene44230:intron 40.0%
! TTAGGTTGTGGAAGTTTGTC+AGG + chr8.1:31747113-31747132 MS.gene44230:intron 40.0%
! TTTTGCCCAAATCACTGGTA+GGG - chr8.1:31746498-31746517 None:intergenic 40.0%
!! AAGCACTTGTGAGAGTGTTT+GGG - chr8.1:31746981-31747000 None:intergenic 40.0%
!! AGGAGTACTGGAAGAATTCA+TGG - chr8.1:31748314-31748333 None:intergenic 40.0%
!! CCATGGTTGTTTTCATCTCT+AGG + chr8.1:31748483-31748502 MS.gene44230:intron 40.0%
!! GGTTGTTTTCATCTCTAGGT+TGG + chr8.1:31748487-31748506 MS.gene44230:intron 40.0%
!! TAAGCACTTGTGAGAGTGTT+TGG - chr8.1:31746982-31747001 None:intergenic 40.0%
!! TACGTTGGACTGATTTTGCA+TGG - chr8.1:31750496-31750515 None:intergenic 40.0%
!! TCTTGCTCTGAGAGTTTCAA+TGG + chr8.1:31748830-31748849 MS.gene44230:CDS 40.0%
!! TTTTGGTGTGGATCCAAACT+TGG + chr8.1:31748794-31748813 MS.gene44230:CDS 40.0%
!!! GACACTTTTTCTGTGTGAAC+TGG + chr8.1:31749512-31749531 MS.gene44230:intron 40.0%
!!! GGCAGTACACCTATTTTTAC+TGG + chr8.1:31748699-31748718 MS.gene44230:intron 40.0%
AGAGTTGAGTAGAAACGGCA+GGG - chr8.1:31748181-31748200 None:intergenic 45.0%
AGTGCTCTATGCTATGTTGG+AGG + chr8.1:31746580-31746599 MS.gene44230:intron 45.0%
ATCAACCCAGTTAGCACTAC+TGG + chr8.1:31748357-31748376 MS.gene44230:intron 45.0%
ATGGCTAAACACCCAAGACT+CGG - chr8.1:31748467-31748486 None:intergenic 45.0%
CACGGCATTCCCATTTGAAT+TGG + chr8.1:31748101-31748120 MS.gene44230:intron 45.0%
CCACTAATCAGTGTGGTCAA+TGG - chr8.1:31750374-31750393 None:intergenic 45.0%
CCCATCTGTCAAAGATTTGC+TGG + chr8.1:31750467-31750486 MS.gene44230:CDS 45.0%
CGAAGTGACTAGATTGTTGG+CGG + chr8.1:31750126-31750145 MS.gene44230:CDS 45.0%
CTAATCAGTGTGGTCAATGG+CGG - chr8.1:31750371-31750390 None:intergenic 45.0%
CTAGAGGGGGGAAAAACAAA+CGG - chr8.1:31748523-31748542 None:intergenic 45.0%
CTCAGAGCAAGAGCTAATTC+AGG - chr8.1:31748822-31748841 None:intergenic 45.0%
CTGGTTACAATGTAGGATGG+TGG + chr8.1:31746607-31746626 MS.gene44230:intron 45.0%
CTTCCATCATGGTTAACTGC+AGG - chr8.1:31749605-31749624 None:intergenic 45.0%
GATCCTGCAGTTAACCATGA+TGG + chr8.1:31749599-31749618 MS.gene44230:CDS 45.0%
GATGCTTCCAAACAGGAGAA+AGG + chr8.1:31748900-31748919 MS.gene44230:CDS 45.0%
GCCAGCAAATCTTTGACAGA+TGG - chr8.1:31750471-31750490 None:intergenic 45.0%
GCTAATTCAGGGTCCAAGTT+TGG - chr8.1:31748810-31748829 None:intergenic 45.0%
GGACGAAGTGACTAGATTGT+TGG + chr8.1:31750123-31750142 MS.gene44230:CDS 45.0%
TAGTGCATGAGTCATGATGG+TGG - chr8.1:31749084-31749103 None:intergenic 45.0%
TCCTCAGGTCTAGAAATAGG+CGG + chr8.1:31747607-31747626 MS.gene44230:intron 45.0%
TCTACCCCTACCAGTGATTT+GGG + chr8.1:31746490-31746509 MS.gene44230:CDS 45.0%
TTAAATGGCGGCAATTGCAG+TGG + chr8.1:31750245-31750264 MS.gene44230:intron 45.0%
TTTGCCCAAATCACTGGTAG+GGG - chr8.1:31746497-31746516 None:intergenic 45.0%
! AGTACATCCGACAGAGCATT+TGG - chr8.1:31748025-31748044 None:intergenic 45.0%
! CACAGTTGGCTCTTAAGCAT+CGG + chr8.1:31747662-31747681 MS.gene44230:CDS 45.0%
! CCATTGACCACACTGATTAG+TGG + chr8.1:31750371-31750390 MS.gene44230:intron 45.0%
!! CTTTGTTTCTGCAGCTTCCT+GGG + chr8.1:31750430-31750449 MS.gene44230:intron 45.0%
!! TCTTTGTTTCTGCAGCTTCC+TGG + chr8.1:31750429-31750448 MS.gene44230:intron 45.0%
!! TTTACTGGTGATGGAGAAGG+TGG + chr8.1:31748714-31748733 MS.gene44230:CDS 45.0%
!! TTTGTTTCTGCAGCTTCCTG+GGG + chr8.1:31750431-31750450 MS.gene44230:intron 45.0%
!! TTTTGAAGGGATACCCACCA+TGG + chr8.1:31750296-31750315 MS.gene44230:intron 45.0%
!! TTTAAATAAAATAATTTAGT+AGG - chr8.1:31750198-31750217 None:intergenic 5.0%
AAACCTAGCTGCTGCCATTC+AGG + chr8.1:31747636-31747655 MS.gene44230:CDS 50.0%
AATAACACTTGGGGCCTGCT+TGG - chr8.1:31747034-31747053 None:intergenic 50.0%
ACAGGCCCTTGCAATGTCAA+TGG + chr8.1:31749574-31749593 MS.gene44230:CDS 50.0%
ACCTGGTCCAAATGCTCTGT+CGG + chr8.1:31748015-31748034 MS.gene44230:CDS 50.0%
AGACGCGACGAGAGATGAAA+TGG - chr8.1:31750622-31750641 None:intergenic 50.0%
AGCATGCCAGTAGTGCTAAC+TGG - chr8.1:31748366-31748385 None:intergenic 50.0%
AGCTACAGATGACCCTGAGT+TGG + chr8.1:31749646-31749665 MS.gene44230:CDS 50.0%
AGGTGTACTGCCACAACACA+AGG - chr8.1:31748691-31748710 None:intergenic 50.0%
CAAAACTCGAACTCCCTTCC+CGG - chr8.1:31746470-31746489 None:intergenic 50.0%
CAATCTAGTCACTTCGTCCG+TGG - chr8.1:31750122-31750141 None:intergenic 50.0%
CACATGGTTCATGTTCCACC+TGG + chr8.1:31747998-31748017 MS.gene44230:CDS 50.0%
CACTTGGGGTCCATTTGGAT+TGG - chr8.1:31746909-31746928 None:intergenic 50.0%
CAGAGTTGAGTAGAAACGGC+AGG - chr8.1:31748182-31748201 None:intergenic 50.0%
CAGGTGGAACATGAACCATG+TGG - chr8.1:31748000-31748019 None:intergenic 50.0%
CAGTACAGAAGCTGAGCCTA+TGG + chr8.1:31748971-31748990 MS.gene44230:CDS 50.0%
CATAGGCTCAGCTTCTGTAC+TGG - chr8.1:31748973-31748992 None:intergenic 50.0%
CTCGGTCATAGTTGCATCCT+GGG - chr8.1:31748946-31748965 None:intergenic 50.0%
GAGTCTTGGGTGTTTAGCCA+TGG + chr8.1:31748466-31748485 MS.gene44230:intron 50.0%
GCATGCCAGTAGTGCTAACT+GGG - chr8.1:31748365-31748384 None:intergenic 50.0%
GCTTCCAAACAGGAGAAAGG+CGG + chr8.1:31748903-31748922 MS.gene44230:CDS 50.0%
GGGGAAAAACAAACGGAGCA+AGG - chr8.1:31748516-31748535 None:intergenic 50.0%
GTCAGTATCAGACACCACCA+CGG + chr8.1:31750102-31750121 MS.gene44230:CDS 50.0%
GTCTACCCCTACCAGTGATT+TGG + chr8.1:31746489-31746508 MS.gene44230:CDS 50.0%
GTTGGAGTTATGACCATGGC+CGG + chr8.1:31746448-31746467 MS.gene44230:CDS 50.0%
TGAAGAGGAGGGACCAAATG+AGG + chr8.1:31751134-31751153 MS.gene44230:CDS 50.0%
TGCAGAGGATGCTTCCAAAC+AGG + chr8.1:31748893-31748912 MS.gene44230:CDS 50.0%
TTGGAGTTATGACCATGGCC+GGG + chr8.1:31746449-31746468 MS.gene44230:CDS 50.0%
! TGCATCGGCAGCTATGTGTA+TGG + chr8.1:31747407-31747426 MS.gene44230:intron 50.0%
!! AACTGGCTTTCACGTGGAAC+AGG + chr8.1:31749529-31749548 MS.gene44230:intron 50.0%
!! ACCGCCTATTTCTAGACCTG+AGG - chr8.1:31747611-31747630 None:intergenic 50.0%
!! AGCTTCTGTACTGGTTCGCT+CGG - chr8.1:31748964-31748983 None:intergenic 50.0%
!! TGTGTGAACTGGCTTTCACG+TGG + chr8.1:31749523-31749542 MS.gene44230:intron 50.0%
AACTCACCTCGAGCCAACTC+AGG - chr8.1:31749662-31749681 None:intergenic 55.0%
ACTCACCTCGAGCCAACTCA+GGG - chr8.1:31749661-31749680 None:intergenic 55.0%
AGCCAACTGTGCCACCTGAA+TGG - chr8.1:31747653-31747672 None:intergenic 55.0%
AGCTGCGAAAAAGGCTGCAG+AGG + chr8.1:31748878-31748897 MS.gene44230:CDS 55.0%
AGTTATGACCATGGCCGGGA+AGG + chr8.1:31746453-31746472 MS.gene44230:CDS 55.0%
CAATGGAAGAGGAGAGAGCC+AGG + chr8.1:31748847-31748866 MS.gene44230:CDS 55.0%
CACACTGTCATGGGGATGGA+TGG + chr8.1:31747437-31747456 MS.gene44230:intron 55.0%
CATCCATCCCCATGACAGTG+TGG - chr8.1:31747439-31747458 None:intergenic 55.0%
CTCACCGCCTTTCTCCTGTT+TGG - chr8.1:31748910-31748929 None:intergenic 55.0%
GCAAGTGCCACACTGTCATG+GGG + chr8.1:31747429-31747448 MS.gene44230:intron 55.0%
GCAGGAAGCAGCTGCGAAAA+AGG + chr8.1:31748869-31748888 MS.gene44230:CDS 55.0%
GCTCGGTCATAGTTGCATCC+TGG - chr8.1:31748947-31748966 None:intergenic 55.0%
GGCAAGTGCCACACTGTCAT+GGG + chr8.1:31747428-31747447 MS.gene44230:intron 55.0%
GTTATGACCATGGCCGGGAA+GGG + chr8.1:31746454-31746473 MS.gene44230:CDS 55.0%
TCCAGATACACCACCTGCAG+AGG - chr8.1:31748769-31748788 None:intergenic 55.0%
TCTAGTCACTTCGTCCGTGG+TGG - chr8.1:31750119-31750138 None:intergenic 55.0%
TGAGCAGCAAGCTACTTCCC+AGG + chr8.1:31748926-31748945 MS.gene44230:CDS 55.0%
TGAGGGGAAGACAGAGAAGC+TGG + chr8.1:31747937-31747956 MS.gene44230:CDS 55.0%
TGCCATTCAGGTGGCACAGT+TGG + chr8.1:31747648-31747667 MS.gene44230:CDS 55.0%
TGGCAAGTGCCACACTGTCA+TGG + chr8.1:31747427-31747446 MS.gene44230:intron 55.0%
! GACAGAGCATTTGGACCAGG+TGG - chr8.1:31748016-31748035 None:intergenic 55.0%
! TCAGTGTGGTCAATGGCGGA+AGG - chr8.1:31750367-31750386 None:intergenic 55.0%
! TCCGACAGAGCATTTGGACC+AGG - chr8.1:31748019-31748038 None:intergenic 55.0%
!! GGTGATGGAGAAGGTGGAAG+CGG + chr8.1:31748720-31748739 MS.gene44230:CDS 55.0%
ACCCACCATGGCTGCTCCAT+AGG + chr8.1:31750308-31750327 MS.gene44230:intron 60.0%
CCACCTGAATGGCAGCAGCT+AGG - chr8.1:31747642-31747661 None:intergenic 60.0%
CCTAGCTGCTGCCATTCAGG+TGG + chr8.1:31747639-31747658 MS.gene44230:CDS 60.0%
GCCTATGGAGCAGCCATGGT+GGG - chr8.1:31750312-31750331 None:intergenic 60.0%
GCCTCTGCAGGTGGTGTATC+TGG + chr8.1:31748765-31748784 MS.gene44230:CDS 60.0%
GGGTCATTTGGGTCAACCCC+AGG - chr8.1:31750450-31750469 None:intergenic 60.0%
GTGCCACACTGTCATGGGGA+TGG + chr8.1:31747433-31747452 MS.gene44230:intron 60.0%
TGCCTATGGAGCAGCCATGG+TGG - chr8.1:31750313-31750332 None:intergenic 60.0%
TGCTGCCTATGGAGCAGCCA+TGG - chr8.1:31750316-31750335 None:intergenic 60.0%
TTTCGCAGCTGCTTCCTGCC+TGG - chr8.1:31748868-31748887 None:intergenic 60.0%
! GTGTGGTCAATGGCGGAAGG+AGG - chr8.1:31750364-31750383 None:intergenic 60.0%
!! GATGACCCTGAGTTGGCTCG+AGG + chr8.1:31749653-31749672 MS.gene44230:CDS 60.0%
GGAAGAGGAGAGAGCCAGGC+AGG + chr8.1:31748851-31748870 MS.gene44230:CDS 65.0%
TCGAACTCCCTTCCCGGCCA+TGG - chr8.1:31746464-31746483 None:intergenic 65.0%
GCAGCAGCAGCCTCTGCAGG+TGG + chr8.1:31748756-31748775 MS.gene44230:CDS 70.0%
GCTGCAGCAGCAGCCTCTGC+AGG + chr8.1:31748753-31748772 MS.gene44230:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 31746043 31751161 31746043 ID=MS.gene44230
chr8.1 mRNA 31746043 31751161 31746043 ID=MS.gene44230.t1;Parent=MS.gene44230
chr8.1 exon 31746043 31746054 31746043 ID=MS.gene44230.t1.exon1;Parent=MS.gene44230.t1
chr8.1 CDS 31746043 31746054 31746043 ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1
chr8.1 exon 31746166 31746279 31746166 ID=MS.gene44230.t1.exon2;Parent=MS.gene44230.t1
chr8.1 CDS 31746166 31746279 31746166 ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1
chr8.1 exon 31746430 31746535 31746430 ID=MS.gene44230.t1.exon3;Parent=MS.gene44230.t1
chr8.1 CDS 31746430 31746535 31746430 ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1
chr8.1 exon 31747614 31747728 31747614 ID=MS.gene44230.t1.exon4;Parent=MS.gene44230.t1
chr8.1 CDS 31747614 31747728 31747614 ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1
chr8.1 exon 31747841 31748050 31747841 ID=MS.gene44230.t1.exon5;Parent=MS.gene44230.t1
chr8.1 CDS 31747841 31748050 31747841 ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1
chr8.1 exon 31748704 31748992 31748704 ID=MS.gene44230.t1.exon6;Parent=MS.gene44230.t1
chr8.1 CDS 31748704 31748992 31748704 ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1
chr8.1 exon 31749551 31749674 31749551 ID=MS.gene44230.t1.exon7;Parent=MS.gene44230.t1
chr8.1 CDS 31749551 31749674 31749551 ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1
chr8.1 exon 31750092 31750180 31750092 ID=MS.gene44230.t1.exon8;Parent=MS.gene44230.t1
chr8.1 CDS 31750092 31750180 31750092 ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1
chr8.1 exon 31750444 31750512 31750444 ID=MS.gene44230.t1.exon9;Parent=MS.gene44230.t1
chr8.1 CDS 31750444 31750512 31750444 ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1
chr8.1 exon 31751120 31751161 31751120 ID=MS.gene44230.t1.exon10;Parent=MS.gene44230.t1
chr8.1 CDS 31751120 31751161 31751120 ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1
Gene Sequence

>MS.gene44230

ATGGTGCTCGAGGTAACCTCTCCGATTTTATTTTCCTCTAATCTTCATCGATTCAATTCCTCCACTGCAATTCGATCAATTAGGGTTTTCTTTAATCGCATCATTAATCTTTGATTTTAATAGGCTACACTTATCATTATGGATAACTCTGAACATATGCGTAACGGTGATTACTCTCCTTCTCGATTTCAAGCTCAATCCGACACTGTTAGTCTTATTTGCGGTGCTAAAACTCAGGTTACTCTCCAATCCAATGCTTAATTCTTGATTCTAAGCAATTTTTTAGGGCTAAATTATATATTGCATTTCAGACTTGGTTTTTATGTTTAATTTTAGGTTTAGGGTTTATGTGTGTTGATATTGTTTTCTTTTTTTGATGAATTTCAGTCTAATCCTGAAAATACTGTTGGAGTTATGACCATGGCCGGGAAGGGAGTTCGAGTTTTGTCTACCCCTACCAGTGATTTGGGCAAAATCTTGGGTTGTATGCATGGTATGTTTTTTTTTCCTCTTAAATCTTTGGTACTCTCTGTGATAAGTGCTCTATGCTATGTTGGAGGAAATCTGGTTACAATGTAGGATGGTGGGAGATTGACATCTTTTAGCCTGTTTCGACAACCGCATAATTTGCAGCTTATAGCATAAGTACTTGTCACATATAAGTGATTATAATAAGCTATTTCCATATCGAAAGATAAAATAAAGTCAAACTGTTTTTGTATAAGCTATAAGCTGTTTATAAGCTATCCTAGAGAACTTAAAAAATAAGCTGAAAACAGCTTATGAATATGTCATAAGCTGTTTTCTGAAGTTTTCCCAAACAGTCTCACAAGTGCTTATGGCTGTAGATAAGCTCAAATAAGCCAATCCAAATGGACCCCAAGTGTTTTTTTTTCTTTTCATTTGTACAAGTACAAGCTGTTTTCATAAGTTTTCCCAAACACTCTCACAAGTGCTTATGCTAGTAGATAAGCTCAAATAAGGCAATCCAAGCAGGCCCCAAGTGTTATTTATTCATTTGTACAATTAAGTACAAGGTTGTCTAAGTAAATTCTATGTGAATTGGATTTTTAGGTTGTGGAAGTTTGTCAGGTTCTGCTATCTAGGGTCTATTTGGATTGACTTATTTGAGCTTATCGGCTGGTATAAGCACTTGTGAGATAGGTTGAGATATCTTGTCGAAACAACTTATTACATGATCATAACTGTTTTCAGCTTATTTATTAAACTCTCCATGATAGCTTATGAAAACAATTTATACATAAGCACTTGTATGATAAGCGCTTATGCTATAAGTGCTTAATTGAGTTGTTTATCCAAATAGGACCATAGTTTCTTTCCTTTTGGCTTCTTATCATTTTAGATGCATCGGCAGCTATGTGTATGGCAAGTGCCACACTGTCATGGGGATGGATGGCTATTAGAAATATTACACTTTCATCTGGGGATGGTTATTACAAAGATTAAACTTTCATCGAACTCATTTTTGTATATATTGAGCAAGTGAAACAAGTTTACATCGTATTGGATTCATCTTTTGATGCAAGAGTTTATTCATTTTTCTTCCTCAGGTCTAGAAATAGGCGGTGAGATAAACCTAGCTGCTGCCATTCAGGTGGCACAGTTGGCTCTTAAGCATCGGCAGAATAAGAAGCAGCAGCAAAGGATTGTTGTCTTTTGTGGAAGGTATGAACAACTATTTATTCTTCATTGTTTGAAGTTTATTCTTCATTGTTTGAAGTTTATTCTTTTTGTAATCGATTCCCCTCCCATAATCTAATTTGGTGCTTTATTATAGTCCTGTCAAGCATGAGAAGAAAATGTTGGAGATGATTGGAAGAAAGTTGAAAAAGAATAGTGTTGCACTTGACATTGTCAACTTTGGAGAAGAAGATGAGGGGAAGACAGAGAAGCTGGAAGCACTCCTTGCAGCTGTAAACAATAATGATAGTAGCCACATGGTTCATGTTCCACCTGGTCCAAATGCTCTGTCGGATGTACTTATAAGGTTTGTGGGTTCAATTTTGTTTTATATATTTTTCTTTTTCTAAATTTGTACACGGCATTCCCATTTGAATTGGGATTTCCTGTTCGGTAAAATTTTAGAAGTTTATTATTATTTATTTAACTTTTATCCCTGCCGTTTCTACTCAACTCTGCCTATTTCTCTTCTAACTCTTTTTGGAGAGAGTTTGAGAGTGTAGACTTTGAAGTTCTATGCATTTTAAAAAAATCTTTTAGTCAATTTTTAACTAAATCCCCAAATAGCCATGAATTCTTCCAGTACTCCTTTAAATGTCAAATCTTTCATTTGATCAACCCAGTTAGCACTACTGGCATGCTTCAAACTACTTTCTTAACCATCCACCTTATATATATATATAGCCTTTGGAGTTGTTTGCTACATTATGATTTTTACATCCGAGTCTTGGGTGTTTAGCCATGGTTGTTTTCATCTCTAGGTTGGAAGCCTTGCTCCGTTTGTTTTTCCCCCCTCTAGTATTATTCTTTTCTCACATTTGTATTTTGTTTGTTTCTTGAGGGTACTTTATCCTTCCTTCCTTCCTTCTATAAAAACTTCCCTCCTTTATAATCTGATAAATTCATCTGTTTATTTGCGCGAAACTTCTGGGATATTTATGTTACCTTGTGTTGTGGCAGTACACCTATTTTTACTGGTGATGGAGAAGGTGGAAGCGGTTTTGCTGCTGCTGCAGCAGCAGCCTCTGCAGGTGGTGTATCTGGATATGATTTTGGTGTGGATCCAAACTTGGACCCTGAATTAGCTCTTGCTCTGAGAGTTTCAATGGAAGAGGAGAGAGCCAGGCAGGAAGCAGCTGCGAAAAAGGCTGCAGAGGATGCTTCCAAACAGGAGAAAGGCGGTGAGCAGCAAGCTACTTCCCAGGATGCAACTATGACCGAGCGAACCAGTACAGAAGCTGAGCCTATGGTTTGTGTTATTAGTTATTTAAGCCATTTTTGTTACCTGTTTTGTCCTTTGCTTTGTTTTGATTGTCATTGACTCATTCTGACACTCACCACCATCATGACTCATGCACTAATATGGGAAGCCATTTGTTATCAGTCTTTATGGAGGTTTTACATCCCATAACTACCCTTGGAGATGTTGCATTTTTCCGTTGGCTCACCAGCATATATTCTAAGTACTTTTCCATGTGGTTTAAATTATACAGATAAATTAGTTATTGTAAATGCTATGGGTACAGAGGAACTTGTAAAGCTTATTTCTAGCATTTTATTGCTTTTCTGTGCGCAACTCAACATCTTTGCCAATGAATAACGTCTTTTTCATGGGCTGATATAACACACACACATTTTGCAGTTTTTTTGTTTGGTTCTACCTGATTTCCGTTTGAATCAGTTAACTTTGTTTTAATTTTTAATTTTATTATTATAATGTTTCTCTACACCGTATCATGTTGCAGTACTAGTTTTTTGTTAACTGATTGACACTTTTTCTGTGTGAACTGGCTTTCACGTGGAACAGGACGATGAGAATGCTCTTCTACAACAGGCCCTTGCAATGTCAATGGATGATCCTGCAGTTAACCATGATGGAAGAGATGCAGATATGTCTGAAGCAGCTACAGATGACCCTGAGTTGGCTCGAGGTGAGTTTTTGTTTTATGTTTTTTAGCCATTATTCATCTAGACATGAGTGAGTATTTTTAAGTCATTTTAGTCTTGTCCTATGTTAGAAGTTAGTTCTTATTATGTTGCATGATGATTGATCTGGTTCTGGAATTAAGATAACAATTGTATTAATTTTGGTTCAAACAAGAGGGATATAGTTTTTTCTTAGTTTATTTTTTTGTTTGGTGATCTAGATGGGTATCACTTCATTGAACATGGGATGCTTTGTATGGATTTATTTTTTTGCTCAGCCAACTCATAGTTTTTTGAGGGTTTGGCTTTGTTGAATCTTGAATAGTTGCCTTCTCTTCTGGGATAAGTTGTGCTGATGAAAAAAGCAGTTTGTATTTCTACTATAGTTTTTTCACTAATTTCTTGTCTTTTGTTGCTTGGAGCTCTACAATTGTCAGTATCAGACACCACCACGGACGAAGTGACTAGATTGTTGGCGGATCAGTCCTTTGTATCTCATGTCCTTGCAACAGTATGTCTGATAAACCTACTAAATTATTTTATTTAAATGTATTAGTGGCAGTGTTGTTAAATACTTAAATGGCGGCAATTGCAGTGGTGATTTTTTTAAAACTGCCATAGGCAATTTTTGAAGGGATACCCACCATGGCTGCTCCATAGGCAGCAGCATGTTTATATGGTGGATAATGTTCCTCCTTCCGCCATTGACCACACTGATTAGTGGAATGACATGCAATATGTTTTGTACCGAGTAATAATTCTTTGTTTCTGCAGCTTCCTGGGGTTGACCCAAATGACCCATCTGTCAAAGATTTGCTGGCTTCCATGCAAAATCAGTCCAACGTAAGTCTTCTTTTATTAGCAAATACCACTGGGTTTAAAGGAACTTCATAGAAAATGTTAATGTTGGCATGATTGAATTTGGCTTCACCTGGATTGATTTTGAGCTCCATTTCATCTCTCGTCGCGTCTTCTAGTTTGTATCTTGTTTTCCTTATTCAGTATAAGTTGGACTTTGCAGTGCATTATCTGTATTGTCGTCTACCTATGGAATGATTTTTTAGAACCATAGTTGTTGGTGGAATTTATATATGGAAATGATGTCAAAATAATCAAGTACCTTGCTAAATAATTTGAGTGAGAAAATAAATATATGCTTAAGCGGAAATATTTGTTTATTATCAATATTTTTTTTGCTTTTTAAATGGTGAAGGTAAAGAGAGAGCCTCTATATGGTGCTTTAAGTGAGTAACGATATCGAACAGTTTTCAGTAAATGACATATTCAAATGTGGTTGTTATTCAAATTTTTTTGACAGAGCATTATACTTTTATATAAATTCTATTCGATCACATTTATGCCCAACATTTTTTCAAATCGAACTATTGGTATTTAGATTTTGATACATGTTGTGCATTATTACTGATTTTATGATTGTATTGTCCATCAGGCTCATAAGAAGAATGAAGAGGAGGGACCAAATGAGGAGTAG

Protein sequence

>MS.gene44230.t1

MVLEATLIIMDNSEHMRNGDYSPSRFQAQSDTVSLICGAKTQSNPENTVGVMTMAGKGVRVLSTPTSDLGKILGCMHGLEIGGEINLAAAIQVAQLALKHRQNKKQQQRIVVFCGSPVKHEKKMLEMIGRKLKKNSVALDIVNFGEEDEGKTEKLEALLAAVNNNDSSHMVHVPPGPNALSDVLISTPIFTGDGEGGSGFAAAAAAASAGGVSGYDFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEDASKQEKGGEQQATSQDATMTERTSTEAEPMDDENALLQQALAMSMDDPAVNHDGRDADMSEAATDDPELARALQLSVSDTTTDEVTRLLADQSFVSHVLATLPGVDPNDPSVKDLLASMQNQSNAHKKNEEEGPNEE