Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44230.t1 | XP_003629286.1 | 99.7 | 389 | 1 | 0 | 1 | 389 | 1 | 389 | 1.00E-153 | 553.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44230.t1 | P55034 | 65.3 | 380 | 115 | 5 | 1 | 375 | 1 | 368 | 1.4e-90 | 334.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44230.t1 | G7LC12 | 99.7 | 389 | 1 | 0 | 1 | 389 | 1 | 389 | 7.3e-154 | 553.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049368 | MS.gene44230 | 0.800752 | 1.24E-48 | -1.69E-46 |
MS.gene050085 | MS.gene44230 | 0.832025 | 1.20E-55 | -1.69E-46 |
MS.gene050689 | MS.gene44230 | 0.808032 | 3.78E-50 | -1.69E-46 |
MS.gene050752 | MS.gene44230 | 0.833556 | 4.98E-56 | -1.69E-46 |
MS.gene050838 | MS.gene44230 | 0.842826 | 2.04E-58 | -1.69E-46 |
MS.gene050945 | MS.gene44230 | 0.815323 | 9.80E-52 | -1.69E-46 |
MS.gene050955 | MS.gene44230 | 0.811608 | 6.43E-51 | -1.69E-46 |
MS.gene051003 | MS.gene44230 | 0.881945 | 1.57E-70 | -1.69E-46 |
MS.gene051234 | MS.gene44230 | 0.823045 | 1.71E-53 | -1.69E-46 |
MS.gene051343 | MS.gene44230 | 0.876796 | 1.05E-68 | -1.69E-46 |
MS.gene051642 | MS.gene44230 | 0.801707 | 7.93E-49 | -1.69E-46 |
MS.gene051975 | MS.gene44230 | 0.874184 | 8.23E-68 | -1.69E-46 |
MS.gene052072 | MS.gene44230 | 0.812405 | 4.31E-51 | -1.69E-46 |
MS.gene052307 | MS.gene44230 | 0.806608 | 7.57E-50 | -1.69E-46 |
MS.gene052609 | MS.gene44230 | 0.823511 | 1.33E-53 | -1.69E-46 |
MS.gene053058 | MS.gene44230 | 0.842775 | 2.10E-58 | -1.69E-46 |
MS.gene053143 | MS.gene44230 | 0.818545 | 1.85E-52 | -1.69E-46 |
MS.gene053564 | MS.gene44230 | 0.819142 | 1.36E-52 | -1.69E-46 |
MS.gene054403 | MS.gene44230 | 0.833429 | 5.36E-56 | -1.69E-46 |
MS.gene055311 | MS.gene44230 | 0.807534 | 4.82E-50 | -1.69E-46 |
MS.gene055313 | MS.gene44230 | 0.807153 | 5.81E-50 | -1.69E-46 |
MS.gene055513 | MS.gene44230 | 0.818637 | 1.77E-52 | -1.69E-46 |
MS.gene056181 | MS.gene44230 | 0.814091 | 1.84E-51 | -1.69E-46 |
MS.gene056699 | MS.gene44230 | 0.806233 | 9.09E-50 | -1.69E-46 |
MS.gene056787 | MS.gene44230 | 0.829497 | 4.98E-55 | -1.69E-46 |
MS.gene056986 | MS.gene44230 | 0.847669 | 9.99E-60 | -1.69E-46 |
MS.gene057102 | MS.gene44230 | 0.833578 | 4.92E-56 | -1.69E-46 |
MS.gene057320 | MS.gene44230 | 0.834865 | 2.34E-56 | -1.69E-46 |
MS.gene057694 | MS.gene44230 | 0.805628 | 1.22E-49 | -1.69E-46 |
MS.gene057890 | MS.gene44230 | -0.801992 | 6.93E-49 | -1.69E-46 |
MS.gene059007 | MS.gene44230 | 0.802 | 6.90E-49 | -1.69E-46 |
MS.gene059146 | MS.gene44230 | 0.85811 | 1.03E-62 | -1.69E-46 |
MS.gene059227 | MS.gene44230 | 0.831 | 2.14E-55 | -1.69E-46 |
MS.gene05985 | MS.gene44230 | -0.815808 | 7.65E-52 | -1.69E-46 |
MS.gene060937 | MS.gene44230 | 0.807755 | 4.33E-50 | -1.69E-46 |
MS.gene061006 | MS.gene44230 | 0.809612 | 1.74E-50 | -1.69E-46 |
MS.gene061100 | MS.gene44230 | 0.846295 | 2.38E-59 | -1.69E-46 |
MS.gene061160 | MS.gene44230 | 0.81425 | 1.70E-51 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44230.t1 | MTR_8g075390 | 99.743 | 389 | 1 | 0 | 1 | 389 | 1 | 389 | 0.0 | 792 |
MS.gene44230.t1 | MTR_5g022440 | 81.343 | 402 | 56 | 5 | 1 | 389 | 1 | 396 | 0.0 | 572 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44230.t1 | AT4G38630 | 66.838 | 389 | 109 | 7 | 1 | 384 | 1 | 374 | 1.89e-171 | 484 |
Find 104 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTTGTTTCTGCAGCTTCC+TGG | 0.182434 | 8.1:+31750429 | MS.gene44230:intron |
ATAGGCTACACTTATCATTA+TGG | 0.241037 | 8.1:+31746162 | MS.gene44230:intron |
TCTTCCTCAGGTCTAGAAAT+AGG | 0.241655 | 8.1:+31747604 | MS.gene44230:intron |
GTCTACCCCTACCAGTGATT+TGG | 0.242788 | 8.1:+31746489 | MS.gene44230:CDS |
GCCTCTGCAGGTGGTGTATC+TGG | 0.245950 | 8.1:+31748765 | MS.gene44230:CDS |
CTCTGTCGGATGTACTTATA+AGG | 0.280586 | 8.1:+31748029 | MS.gene44230:CDS |
CTTTGTTTCTGCAGCTTCCT+GGG | 0.285905 | 8.1:+31750430 | MS.gene44230:intron |
CCCATCTGTCAAAGATTTGC+TGG | 0.299417 | 8.1:+31750467 | MS.gene44230:CDS |
CTCACCGCCTTTCTCCTGTT+TGG | 0.299610 | 8.1:-31748907 | None:intergenic |
TCTTTGACAGATGGGTCATT+TGG | 0.306410 | 8.1:-31750459 | None:intergenic |
GCTGCAGCAGCAGCCTCTGC+AGG | 0.307628 | 8.1:+31748753 | MS.gene44230:CDS |
GCAGGAAGCAGCTGCGAAAA+AGG | 0.312036 | 8.1:+31748869 | MS.gene44230:CDS |
AAACCTAGCTGCTGCCATTC+AGG | 0.316711 | 8.1:+31747636 | MS.gene44230:CDS |
GCTAATTCAGGGTCCAAGTT+TGG | 0.325391 | 8.1:-31748807 | None:intergenic |
TCTACCCCTACCAGTGATTT+GGG | 0.334303 | 8.1:+31746490 | MS.gene44230:CDS |
CTTTGACAGATGGGTCATTT+GGG | 0.350062 | 8.1:-31750458 | None:intergenic |
CAGTGATTTGGGCAAAATCT+TGG | 0.352937 | 8.1:+31746501 | MS.gene44230:CDS |
CTCAGAGCAAGAGCTAATTC+AGG | 0.371235 | 8.1:-31748819 | None:intergenic |
GGTGTATCTGGATATGATTT+TGG | 0.373205 | 8.1:+31748777 | MS.gene44230:CDS |
TTTCGCAGCTGCTTCCTGCC+TGG | 0.391968 | 8.1:-31748865 | None:intergenic |
CAAGAATACTACTCCTCATT+TGG | 0.400764 | 8.1:-31751147 | None:intergenic |
CAAAACTCGAACTCCCTTCC+CGG | 0.405445 | 8.1:-31746467 | None:intergenic |
GCTCGGTCATAGTTGCATCC+TGG | 0.408251 | 8.1:-31748944 | None:intergenic |
AGTACATCCGACAGAGCATT+TGG | 0.417933 | 8.1:-31748022 | None:intergenic |
TGCCATTCAGGTGGCACAGT+TGG | 0.425490 | 8.1:+31747648 | MS.gene44230:CDS |
AGTGATTTGGGCAAAATCTT+GGG | 0.427099 | 8.1:+31746502 | MS.gene44230:CDS |
AAGAAAATGTTGGAGATGAT+TGG | 0.430493 | 8.1:+31747857 | MS.gene44230:CDS |
GACACTGTTAGTCTTATTTG+CGG | 0.431330 | 8.1:+31746244 | MS.gene44230:CDS |
CTCGGTCATAGTTGCATCCT+GGG | 0.443007 | 8.1:-31748943 | None:intergenic |
TGCAGAGGATGCTTCCAAAC+AGG | 0.449158 | 8.1:+31748893 | MS.gene44230:CDS |
GCAGCAGCAGCCTCTGCAGG+TGG | 0.451237 | 8.1:+31748756 | MS.gene44230:CDS |
CAATGGAAGAGGAGAGAGCC+AGG | 0.451887 | 8.1:+31748847 | MS.gene44230:CDS |
GGAAGAGGAGAGAGCCAGGC+AGG | 0.467566 | 8.1:+31748851 | MS.gene44230:CDS |
TGAGAATGCTCTTCTACAAC+AGG | 0.478713 | 8.1:+31749556 | MS.gene44230:CDS |
AACTCACCTCGAGCCAACTC+AGG | 0.480781 | 8.1:-31749659 | None:intergenic |
TGAGGGGAAGACAGAGAAGC+TGG | 0.484092 | 8.1:+31747937 | MS.gene44230:CDS |
GCACTTGACATTGTCAACTT+TGG | 0.484613 | 8.1:+31747905 | MS.gene44230:CDS |
TCTTGCTCTGAGAGTTTCAA+TGG | 0.484864 | 8.1:+31748830 | MS.gene44230:CDS |
GGACGAAGTGACTAGATTGT+TGG | 0.487197 | 8.1:+31750123 | MS.gene44230:CDS |
TATTTGCGGTGCTAAAACTC+AGG | 0.487975 | 8.1:+31746258 | MS.gene44230:CDS |
AGCTTCTGTACTGGTTCGCT+CGG | 0.490367 | 8.1:-31748961 | None:intergenic |
CATAGGCTCAGCTTCTGTAC+TGG | 0.491628 | 8.1:-31748970 | None:intergenic |
TCGAACTCCCTTCCCGGCCA+TGG | 0.492622 | 8.1:-31746461 | None:intergenic |
TCTAATCCTGAAAATACTGT+TGG | 0.499375 | 8.1:+31746430 | MS.gene44230:CDS |
GATCATCCATTGACATTGCA+AGG | 0.500246 | 8.1:-31749580 | None:intergenic |
ACCTGGTCCAAATGCTCTGT+CGG | 0.502391 | 8.1:+31748015 | MS.gene44230:CDS |
TCTGAGAGTTTCAATGGAAG+AGG | 0.510357 | 8.1:+31748836 | MS.gene44230:CDS |
ACAGGCCCTTGCAATGTCAA+TGG | 0.511218 | 8.1:+31749574 | MS.gene44230:CDS |
CAGTACAGAAGCTGAGCCTA+TGG | 0.512282 | 8.1:+31748971 | MS.gene44230:CDS |
CAAGCATGAGAAGAAAATGT+TGG | 0.513604 | 8.1:+31747847 | MS.gene44230:CDS |
GCCAGCAAATCTTTGACAGA+TGG | 0.519859 | 8.1:-31750468 | None:intergenic |
AGCCAACTGTGCCACCTGAA+TGG | 0.521804 | 8.1:-31747650 | None:intergenic |
TTTACTGGTGATGGAGAAGG+TGG | 0.527650 | 8.1:+31748714 | MS.gene44230:CDS |
CTTCCATCATGGTTAACTGC+AGG | 0.530356 | 8.1:-31749602 | None:intergenic |
GTTATGACCATGGCCGGGAA+GGG | 0.531594 | 8.1:+31746454 | MS.gene44230:CDS |
AAAATCTTGGGTTGTATGCA+TGG | 0.533026 | 8.1:+31746514 | MS.gene44230:CDS |
GGGTCATTTGGGTCAACCCC+AGG | 0.533244 | 8.1:-31750447 | None:intergenic |
TCAGAGCAAGAGCTAATTCA+GGG | 0.536745 | 8.1:-31748818 | None:intergenic |
TTTGTTTCTGCAGCTTCCTG+GGG | 0.540653 | 8.1:+31750431 | MS.gene44230:intron |
GATGCTTCCAAACAGGAGAA+AGG | 0.543596 | 8.1:+31748900 | MS.gene44230:CDS |
CACATGGTTCATGTTCCACC+TGG | 0.545946 | 8.1:+31747998 | MS.gene44230:CDS |
CACAGTTGGCTCTTAAGCAT+CGG | 0.549170 | 8.1:+31747662 | MS.gene44230:CDS |
GTTGGAGTTATGACCATGGC+CGG | 0.550710 | 8.1:+31746448 | MS.gene44230:CDS |
TGAAGAGGAGGGACCAAATG+AGG | 0.554105 | 8.1:+31751134 | MS.gene44230:CDS |
AGAATAAGAAGCAGCAGCAA+AGG | 0.554704 | 8.1:+31747686 | MS.gene44230:CDS |
CCAGCAAATCTTTGACAGAT+GGG | 0.555521 | 8.1:-31750467 | None:intergenic |
CCACCTGAATGGCAGCAGCT+AGG | 0.557823 | 8.1:-31747639 | None:intergenic |
TTTGCCCAAATCACTGGTAG+GGG | 0.564614 | 8.1:-31746494 | None:intergenic |
CATTATTGTTTACAGCTGCA+AGG | 0.566431 | 8.1:-31747967 | None:intergenic |
AGTTATGACCATGGCCGGGA+AGG | 0.571550 | 8.1:+31746453 | MS.gene44230:CDS |
AGCTACAGATGACCCTGAGT+TGG | 0.581144 | 8.1:+31749646 | MS.gene44230:CDS |
TATCTGCATCTCTTCCATCA+TGG | 0.583898 | 8.1:-31749613 | None:intergenic |
CAACTTTGGAGAAGAAGATG+AGG | 0.586931 | 8.1:+31747919 | MS.gene44230:CDS |
CTTTCCAACAATGGTGCTCG+AGG | 0.591593 | 8.1:+31746033 | None:intergenic |
GGTGATGGAGAAGGTGGAAG+CGG | 0.592077 | 8.1:+31748720 | MS.gene44230:CDS |
TGAGCAGCAAGCTACTTCCC+AGG | 0.598003 | 8.1:+31748926 | MS.gene44230:CDS |
AACTTTGGAGAAGAAGATGA+GGG | 0.598180 | 8.1:+31747920 | MS.gene44230:CDS |
GATCCTGCAGTTAACCATGA+TGG | 0.599212 | 8.1:+31749599 | MS.gene44230:CDS |
CGAAGTGACTAGATTGTTGG+CGG | 0.599863 | 8.1:+31750126 | MS.gene44230:CDS |
TCATAAGAAGAATGAAGAGG+AGG | 0.601911 | 8.1:+31751122 | MS.gene44230:CDS |
ACTCACCTCGAGCCAACTCA+GGG | 0.602418 | 8.1:-31749658 | None:intergenic |
TCCAGATACACCACCTGCAG+AGG | 0.602692 | 8.1:-31748766 | None:intergenic |
TTGGAGTTATGACCATGGCC+GGG | 0.605725 | 8.1:+31746449 | MS.gene44230:CDS |
AACTCTGAACATATGCGTAA+CGG | 0.612049 | 8.1:+31746187 | MS.gene44230:CDS |
TCCGACAGAGCATTTGGACC+AGG | 0.615302 | 8.1:-31748016 | None:intergenic |
CAATCTAGTCACTTCGTCCG+TGG | 0.621703 | 8.1:-31750119 | None:intergenic |
TTATCAGACATACTGTTGCA+AGG | 0.624899 | 8.1:-31750171 | None:intergenic |
ATCATCCATTGACATTGCAA+GGG | 0.626501 | 8.1:-31749579 | None:intergenic |
CATAAGAAGAATGAAGAGGA+GGG | 0.627494 | 8.1:+31751123 | MS.gene44230:CDS |
GGCTCATAAGAAGAATGAAG+AGG | 0.636641 | 8.1:+31751119 | MS.gene44230:intron |
CAATAATGATAGTAGCCACA+TGG | 0.640045 | 8.1:+31747982 | MS.gene44230:CDS |
TGCAAGGACATGAGATACAA+AGG | 0.642470 | 8.1:-31750155 | None:intergenic |
CCTAGCTGCTGCCATTCAGG+TGG | 0.642995 | 8.1:+31747639 | MS.gene44230:CDS |
TCTAGTCACTTCGTCCGTGG+TGG | 0.650322 | 8.1:-31750116 | None:intergenic |
GATGACCCTGAGTTGGCTCG+AGG | 0.650651 | 8.1:+31749653 | MS.gene44230:CDS |
GATTGAGCTTGAAATCGAGA+AGG | 0.652006 | 8.1:-31746220 | None:intergenic |
GCAAATAAGACTAACAGTGT+CGG | 0.657951 | 8.1:-31746242 | None:intergenic |
GACAGAGCATTTGGACCAGG+TGG | 0.676689 | 8.1:-31748013 | None:intergenic |
TACTGTTGGAGTTATGACCA+TGG | 0.686072 | 8.1:+31746444 | MS.gene44230:CDS |
TCCTCAGGTCTAGAAATAGG+CGG | 0.696316 | 8.1:+31747607 | MS.gene44230:intron |
ACTTTGGAGAAGAAGATGAG+GGG | 0.698383 | 8.1:+31747921 | MS.gene44230:CDS |
GCTTCCAAACAGGAGAAAGG+CGG | 0.712590 | 8.1:+31748903 | MS.gene44230:CDS |
GTCAGTATCAGACACCACCA+CGG | 0.720202 | 8.1:+31750102 | MS.gene44230:CDS |
CAGGTGGAACATGAACCATG+TGG | 0.807488 | 8.1:-31747997 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTATTTAAATGTATTAG+TGG | + | chr8.1:31750206-31750225 | MS.gene44230:intron | 10.0% |
!!! | TATTTTTTTTGCTTTTTAAA+TGG | + | chr8.1:31750855-31750874 | MS.gene44230:intron | 10.0% |
!! | AAAATAAATATATGCTTAAG+CGG | + | chr8.1:31750812-31750831 | MS.gene44230:intron | 15.0% |
!! | AAAGGCTATATATATATATA+AGG | - | chr8.1:31748413-31748432 | None:intergenic | 15.0% |
!! | ATGAATTTATCAGATTATAA+AGG | - | chr8.1:31748630-31748649 | None:intergenic | 15.0% |
!! | TTATATATATATATAGCCTT+TGG | + | chr8.1:31748412-31748431 | MS.gene44230:intron | 15.0% |
!!! | CATTAATCTTTGATTTTAAT+AGG | + | chr8.1:31746144-31746163 | MS.gene44230:intron | 15.0% |
!!! | GATAACAATTGTATTAATTT+TGG | + | chr8.1:31749812-31749831 | MS.gene44230:intron | 15.0% |
!!! | TATGTTTAATTTTAGGTTTA+GGG | + | chr8.1:31746364-31746383 | MS.gene44230:intron | 15.0% |
!!! | TCTTAGTTTATTTTTTTGTT+TGG | + | chr8.1:31749860-31749879 | MS.gene44230:intron | 15.0% |
!!! | TGGTTTTTATGTTTAATTTT+AGG | + | chr8.1:31746357-31746376 | MS.gene44230:intron | 15.0% |
!!! | TTATGTTTAATTTTAGGTTT+AGG | + | chr8.1:31746363-31746382 | MS.gene44230:intron | 15.0% |
!! | AAAAGAAAAAAAAACACTTG+GGG | - | chr8.1:31746923-31746942 | None:intergenic | 20.0% |
!! | AAATGAATAAATAACACTTG+GGG | - | chr8.1:31747043-31747062 | None:intergenic | 20.0% |
!! | AATTTATCAGATTATAAAGG+AGG | - | chr8.1:31748627-31748646 | None:intergenic | 20.0% |
!! | ACAAATGAATAAATAACACT+TGG | - | chr8.1:31747045-31747064 | None:intergenic | 20.0% |
!! | AGAAACAAAGAATTATTACT+CGG | - | chr8.1:31750420-31750439 | None:intergenic | 20.0% |
!! | AGATTAGAGGAAAATAAAAT+CGG | - | chr8.1:31746067-31746086 | None:intergenic | 20.0% |
!! | ATATATATATATAAGGTGGA+TGG | - | chr8.1:31748406-31748425 | None:intergenic | 20.0% |
!! | ATGAAAGATTTGACATTTAA+AGG | - | chr8.1:31748334-31748353 | None:intergenic | 20.0% |
!! | ATTAGTTATTGTAAATGCTA+TGG | + | chr8.1:31749241-31749260 | MS.gene44230:intron | 20.0% |
!! | ATTTATCAGATTATAAAGGA+GGG | - | chr8.1:31748626-31748645 | None:intergenic | 20.0% |
!! | CAAATGAATAAATAACACTT+GGG | - | chr8.1:31747044-31747063 | None:intergenic | 20.0% |
!! | GAAAAGAAAAAAAAACACTT+GGG | - | chr8.1:31746924-31746943 | None:intergenic | 20.0% |
!! | TAAGTAAATTCTATGTGAAT+TGG | + | chr8.1:31747086-31747105 | MS.gene44230:intron | 20.0% |
!! | TGAAAAGAAAAAAAAACACT+TGG | - | chr8.1:31746925-31746944 | None:intergenic | 20.0% |
!! | TTAGTTATTGTAAATGCTAT+GGG | + | chr8.1:31749242-31749261 | MS.gene44230:intron | 20.0% |
!! | TTCATAGAAAATGTTAATGT+TGG | + | chr8.1:31750557-31750576 | MS.gene44230:intron | 20.0% |
!!! | AGTGTTGTTAAATACTTAAA+TGG | + | chr8.1:31750230-31750249 | MS.gene44230:intron | 20.0% |
!!! | ATTTTTTCAAATCGAACTAT+TGG | + | chr8.1:31751036-31751055 | MS.gene44230:intron | 20.0% |
!!! | CTTTATTTTATCTTTCGATA+TGG | - | chr8.1:31746728-31746747 | None:intergenic | 20.0% |
!!! | TCTTTTTCTAAATTTGTACA+CGG | + | chr8.1:31748083-31748102 | MS.gene44230:intron | 20.0% |
!!! | TGATTCTAAGCAATTTTTTA+GGG | + | chr8.1:31746308-31746327 | MS.gene44230:intron | 20.0% |
!!! | TTGATTCTAAGCAATTTTTT+AGG | + | chr8.1:31746307-31746326 | MS.gene44230:intron | 20.0% |
!!! | TTTTTTTCCTCTTAAATCTT+TGG | + | chr8.1:31746543-31746562 | MS.gene44230:intron | 20.0% |
! | AAAAGAGTTAGAAGAGAAAT+AGG | - | chr8.1:31748205-31748224 | None:intergenic | 25.0% |
! | AAATATTACACTTTCATCTG+GGG | + | chr8.1:31747467-31747486 | MS.gene44230:intron | 25.0% |
! | AGAAAAGAATAATACTAGAG+GGG | - | chr8.1:31748537-31748556 | None:intergenic | 25.0% |
! | AGAAATATTACACTTTCATC+TGG | + | chr8.1:31747465-31747484 | MS.gene44230:intron | 25.0% |
! | ATGAAAAAGACGTTATTCAT+TGG | - | chr8.1:31749336-31749355 | None:intergenic | 25.0% |
! | CATTTGTACAATTAAGTACA+AGG | + | chr8.1:31747058-31747077 | MS.gene44230:intron | 25.0% |
! | GAAATATTACACTTTCATCT+GGG | + | chr8.1:31747466-31747485 | MS.gene44230:intron | 25.0% |
! | GAGAAAAGAATAATACTAGA+GGG | - | chr8.1:31748538-31748557 | None:intergenic | 25.0% |
! | GGCTATATATATATATAAGG+TGG | - | chr8.1:31748410-31748429 | None:intergenic | 25.0% |
! | GTAAATGACATATTCAAATG+TGG | + | chr8.1:31750941-31750960 | MS.gene44230:intron | 25.0% |
! | GTTGTTAAATACTTAAATGG+CGG | + | chr8.1:31750233-31750252 | MS.gene44230:intron | 25.0% |
! | TAAAATGATAAGAAGCCAAA+AGG | - | chr8.1:31747385-31747404 | None:intergenic | 25.0% |
! | TAACTAATAACACAAACCAT+AGG | - | chr8.1:31748990-31749009 | None:intergenic | 25.0% |
! | TAAGAACTAACTTCTAACAT+AGG | - | chr8.1:31749755-31749774 | None:intergenic | 25.0% |
! | TAATAAAAGAAGACTTACGT+TGG | - | chr8.1:31750511-31750530 | None:intergenic | 25.0% |
! | TAGAATCAAGAATTAAGCAT+TGG | - | chr8.1:31746296-31746315 | None:intergenic | 25.0% |
! | TATATATTGCATTTCAGACT+TGG | + | chr8.1:31746337-31746356 | MS.gene44230:intron | 25.0% |
! | TCTGTATAATTTAAACCACA+TGG | - | chr8.1:31749218-31749237 | None:intergenic | 25.0% |
! | TGAGAAAAGAATAATACTAG+AGG | - | chr8.1:31748539-31748558 | None:intergenic | 25.0% |
! | TTTCCTTATTCAGTATAAGT+TGG | + | chr8.1:31750659-31750678 | MS.gene44230:intron | 25.0% |
!! | AAAGCACCAAATTAGATTAT+GGG | - | chr8.1:31747814-31747833 | None:intergenic | 25.0% |
!! | AAAGTACTTAGAATATATGC+TGG | - | chr8.1:31749194-31749213 | None:intergenic | 25.0% |
!! | ACAAAGTTAACTGATTCAAA+CGG | - | chr8.1:31749415-31749434 | None:intergenic | 25.0% |
!! | AGTTCGATTTGAAAAAATGT+TGG | - | chr8.1:31751034-31751053 | None:intergenic | 25.0% |
!! | ATTGACTTATTTGAGCTTAT+CGG | + | chr8.1:31747160-31747179 | MS.gene44230:intron | 25.0% |
!! | ATTGAGTTGTTTATCCAAAT+AGG | + | chr8.1:31747345-31747364 | MS.gene44230:intron | 25.0% |
!! | ATTGTTTTCATAAGCTATCA+TGG | - | chr8.1:31747278-31747297 | None:intergenic | 25.0% |
!! | ATTTCTCTTCTAACTCTTTT+TGG | + | chr8.1:31748205-31748224 | MS.gene44230:intron | 25.0% |
!! | GTTCGATTTGAAAAAATGTT+GGG | - | chr8.1:31751033-31751052 | None:intergenic | 25.0% |
!! | TAAAGCACCAAATTAGATTA+TGG | - | chr8.1:31747815-31747834 | None:intergenic | 25.0% |
!! | TCTATGTGAATTGGATTTTT+AGG | + | chr8.1:31747095-31747114 | MS.gene44230:intron | 25.0% |
!! | TCTTATCATTTTAGATGCAT+CGG | + | chr8.1:31747392-31747411 | MS.gene44230:intron | 25.0% |
!! | TTGTTGGTGGAATTTATATA+TGG | + | chr8.1:31750742-31750761 | MS.gene44230:intron | 25.0% |
!! | TTTTATTAGCAAATACCACT+GGG | + | chr8.1:31750523-31750542 | MS.gene44230:intron | 25.0% |
!!! | AATGAATAACGTCTTTTTCA+TGG | + | chr8.1:31749335-31749354 | MS.gene44230:intron | 25.0% |
!!! | ATGAATAACGTCTTTTTCAT+GGG | + | chr8.1:31749336-31749355 | MS.gene44230:intron | 25.0% |
!!! | CATTTTGCAGTTTTTTTGTT+TGG | + | chr8.1:31749376-31749395 | MS.gene44230:intron | 25.0% |
!!! | GATTTTTTTAAAACTGCCAT+AGG | + | chr8.1:31750269-31750288 | MS.gene44230:intron | 25.0% |
!!! | GCTTATTTTTTAAGTTCTCT+AGG | - | chr8.1:31746793-31746812 | None:intergenic | 25.0% |
!!! | GTATTTTGTTTGTTTCTTGA+GGG | + | chr8.1:31748564-31748583 | MS.gene44230:intron | 25.0% |
!!! | GTTCTAAAAAATCATTCCAT+AGG | - | chr8.1:31750717-31750736 | None:intergenic | 25.0% |
!!! | TAATTTTGGTTCAAACAAGA+GGG | + | chr8.1:31749826-31749845 | MS.gene44230:intron | 25.0% |
!!! | TGTATTTTGTTTGTTTCTTG+AGG | + | chr8.1:31748563-31748582 | MS.gene44230:intron | 25.0% |
!!! | TTAATTTTGGTTCAAACAAG+AGG | + | chr8.1:31749825-31749844 | MS.gene44230:intron | 25.0% |
!!! | TTTATTCATTTTTCTTCCTC+AGG | + | chr8.1:31747592-31747611 | MS.gene44230:intron | 25.0% |
!!! | TTTTGCTTTTTAAATGGTGA+AGG | + | chr8.1:31750861-31750880 | MS.gene44230:intron | 25.0% |
!!! | TTTTTTAGAACCATAGTTGT+TGG | + | chr8.1:31750726-31750745 | MS.gene44230:intron | 25.0% |
AAAAGAATAATACTAGAGGG+GGG | - | chr8.1:31748535-31748554 | None:intergenic | 30.0% | |
AAAGAAACTATGGTCCTATT+TGG | - | chr8.1:31747362-31747381 | None:intergenic | 30.0% | |
AAGAAAATGTTGGAGATGAT+TGG | + | chr8.1:31747857-31747876 | MS.gene44230:CDS | 30.0% | |
AATGTTGGCATGATTGAATT+TGG | + | chr8.1:31750572-31750591 | MS.gene44230:intron | 30.0% | |
ACTCATGTCTAGATGAATAA+TGG | - | chr8.1:31749704-31749723 | None:intergenic | 30.0% | |
AGTCCAACTTATACTGAATA+AGG | - | chr8.1:31750665-31750684 | None:intergenic | 30.0% | |
ATAAATTCCACCAACAACTA+TGG | - | chr8.1:31750739-31750758 | None:intergenic | 30.0% | |
ATAGGCTACACTTATCATTA+TGG | + | chr8.1:31746162-31746181 | MS.gene44230:intron | 30.0% | |
ATTGAATCGATGAAGATTAG+AGG | - | chr8.1:31746080-31746099 | None:intergenic | 30.0% | |
ATTTATGTTACCTTGTGTTG+TGG | + | chr8.1:31748678-31748697 | MS.gene44230:intron | 30.0% | |
CCATAAAGACTGATAACAAA+TGG | - | chr8.1:31749117-31749136 | None:intergenic | 30.0% | |
CTAGTAGATAAGCTCAAATA+AGG | + | chr8.1:31747004-31747023 | MS.gene44230:intron | 30.0% | |
CTCACTCAAATTATTTAGCA+AGG | - | chr8.1:31750792-31750811 | None:intergenic | 30.0% | |
GAAAAGAATAATACTAGAGG+GGG | - | chr8.1:31748536-31748555 | None:intergenic | 30.0% | |
GAAACAAGTTTACATCGTAT+TGG | + | chr8.1:31747548-31747567 | MS.gene44230:intron | 30.0% | |
GACAAAACAGGTAACAAAAA+TGG | - | chr8.1:31749019-31749038 | None:intergenic | 30.0% | |
GATGTACTTATAAGGTTTGT+GGG | + | chr8.1:31748037-31748056 | MS.gene44230:intron | 30.0% | |
TCTAATCCTGAAAATACTGT+TGG | + | chr8.1:31746430-31746449 | MS.gene44230:CDS | 30.0% | |
TGACAATCAAAACAAAGCAA+AGG | - | chr8.1:31749041-31749060 | None:intergenic | 30.0% | |
TTATGATTGTATTGTCCATC+AGG | + | chr8.1:31751098-31751117 | MS.gene44230:intron | 30.0% | |
! | AGTTTTTATAGAAGGAAGGA+AGG | - | chr8.1:31748602-31748621 | None:intergenic | 30.0% |
! | ATAACTCCAACAGTATTTTC+AGG | - | chr8.1:31746439-31746458 | None:intergenic | 30.0% |
! | ATTCTAAGTACTTTTCCATG+TGG | + | chr8.1:31749200-31749219 | MS.gene44230:intron | 30.0% |
! | ATTTCTTGTCTTTTGTTGCT+TGG | + | chr8.1:31750067-31750086 | MS.gene44230:intron | 30.0% |
! | CTTTTATTAGCAAATACCAC+TGG | + | chr8.1:31750522-31750541 | MS.gene44230:intron | 30.0% |
! | TTTGACATTTAAAGGAGTAC+TGG | - | chr8.1:31748326-31748345 | None:intergenic | 30.0% |
! | TTTGTTATCAGTCTTTATGG+AGG | + | chr8.1:31749117-31749136 | MS.gene44230:intron | 30.0% |
!! | CCATTTGTTATCAGTCTTTA+TGG | + | chr8.1:31749114-31749133 | MS.gene44230:intron | 30.0% |
!! | TCAAGAATTAAGCATTGGAT+TGG | - | chr8.1:31746291-31746310 | None:intergenic | 30.0% |
!! | TTTTGTTTGGTGATCTAGAT+GGG | + | chr8.1:31749873-31749892 | MS.gene44230:intron | 30.0% |
!! | TTTTTGTTTGGTGATCTAGA+TGG | + | chr8.1:31749872-31749891 | MS.gene44230:intron | 30.0% |
!!! | CTTCTAAAATTTTACCGAAC+AGG | - | chr8.1:31748132-31748151 | None:intergenic | 30.0% |
!!! | TGAATTGGATTTTTAGGTTG+TGG | + | chr8.1:31747101-31747120 | MS.gene44230:intron | 30.0% |
AACAAAGCAAAGGACAAAAC+AGG | - | chr8.1:31749031-31749050 | None:intergenic | 35.0% | |
AACTCTGAACATATGCGTAA+CGG | + | chr8.1:31746187-31746206 | MS.gene44230:CDS | 35.0% | |
AATCTGGTTACAATGTAGGA+TGG | + | chr8.1:31746604-31746623 | MS.gene44230:intron | 35.0% | |
AATGTAGCAAACAACTCCAA+AGG | - | chr8.1:31748431-31748450 | None:intergenic | 35.0% | |
ACAGGAAATCCCAATTCAAA+TGG | - | chr8.1:31748114-31748133 | None:intergenic | 35.0% | |
ACCAAATTAGATTATGGGAG+GGG | - | chr8.1:31747809-31747828 | None:intergenic | 35.0% | |
ACCCTCAAAAAACTATGAGT+TGG | - | chr8.1:31749951-31749970 | None:intergenic | 35.0% | |
ACTAGTACTGCAACATGATA+CGG | - | chr8.1:31749476-31749495 | None:intergenic | 35.0% | |
AGAGGAAAATAAAATCGGAG+AGG | - | chr8.1:31746062-31746081 | None:intergenic | 35.0% | |
AGCCAAAAGGAAAGAAACTA+TGG | - | chr8.1:31747372-31747391 | None:intergenic | 35.0% | |
AGGAAATCTGGTTACAATGT+AGG | + | chr8.1:31746600-31746619 | MS.gene44230:intron | 35.0% | |
ATAAGTGCTCTATGCTATGT+TGG | + | chr8.1:31746577-31746596 | MS.gene44230:intron | 35.0% | |
ATCATCCATTGACATTGCAA+GGG | - | chr8.1:31749582-31749601 | None:intergenic | 35.0% | |
ATCCCTTCAAAAATTGCCTA+TGG | - | chr8.1:31750288-31750307 | None:intergenic | 35.0% | |
ATGTTGCATGATGATTGATC+TGG | + | chr8.1:31749777-31749796 | MS.gene44230:intron | 35.0% | |
CAAGCATGAGAAGAAAATGT+TGG | + | chr8.1:31747847-31747866 | MS.gene44230:CDS | 35.0% | |
CAATAATGATAGTAGCCACA+TGG | + | chr8.1:31747982-31748001 | MS.gene44230:CDS | 35.0% | |
CACCAAATTAGATTATGGGA+GGG | - | chr8.1:31747810-31747829 | None:intergenic | 35.0% | |
CACTGCAATTCGATCAATTA+GGG | + | chr8.1:31746105-31746124 | MS.gene44230:intron | 35.0% | |
CAGGAAATCCCAATTCAAAT+GGG | - | chr8.1:31748113-31748132 | None:intergenic | 35.0% | |
CATAAGAAGAATGAAGAGGA+GGG | + | chr8.1:31751123-31751142 | MS.gene44230:CDS | 35.0% | |
CATGACTCATGCACTAATAT+GGG | + | chr8.1:31749088-31749107 | MS.gene44230:intron | 35.0% | |
CATTATTGTTTACAGCTGCA+AGG | - | chr8.1:31747970-31747989 | None:intergenic | 35.0% | |
CTCAAATAAGCCAATCCAAA+TGG | + | chr8.1:31746896-31746915 | MS.gene44230:intron | 35.0% | |
GAAAAATGCAACATCTCCAA+GGG | - | chr8.1:31749161-31749180 | None:intergenic | 35.0% | |
GAAGAATTCATGGCTATTTG+GGG | - | chr8.1:31748304-31748323 | None:intergenic | 35.0% | |
GCAAATAAGACTAACAGTGT+CGG | - | chr8.1:31746245-31746264 | None:intergenic | 35.0% | |
GCTATAAGCTGCAAATTATG+CGG | - | chr8.1:31746664-31746683 | None:intergenic | 35.0% | |
GGAAGAATTCATGGCTATTT+GGG | - | chr8.1:31748305-31748324 | None:intergenic | 35.0% | |
GGATGTACTTATAAGGTTTG+TGG | + | chr8.1:31748036-31748055 | MS.gene44230:intron | 35.0% | |
GGTATCACTTCATTGAACAT+GGG | + | chr8.1:31749894-31749913 | MS.gene44230:intron | 35.0% | |
TATTAGTGCATGAGTCATGA+TGG | - | chr8.1:31749087-31749106 | None:intergenic | 35.0% | |
TCATAAGAAGAATGAAGAGG+AGG | + | chr8.1:31751122-31751141 | MS.gene44230:CDS | 35.0% | |
TCATGACTCATGCACTAATA+TGG | + | chr8.1:31749087-31749106 | MS.gene44230:intron | 35.0% | |
TCTCCATCACCAGTAAAAAT+AGG | - | chr8.1:31748711-31748730 | None:intergenic | 35.0% | |
TGGAAGAATTCATGGCTATT+TGG | - | chr8.1:31748306-31748325 | None:intergenic | 35.0% | |
TTATCAGACATACTGTTGCA+AGG | - | chr8.1:31750174-31750193 | None:intergenic | 35.0% | |
TTGAATTGGGATTTCCTGTT+CGG | + | chr8.1:31748115-31748134 | MS.gene44230:intron | 35.0% | |
TTTATAGAAGGAAGGAAGGA+AGG | - | chr8.1:31748598-31748617 | None:intergenic | 35.0% | |
TTTATTTGCGCGAAACTTCT+GGG | + | chr8.1:31748653-31748672 | MS.gene44230:intron | 35.0% | |
! | AAAATCTTGGGTTGTATGCA+TGG | + | chr8.1:31746514-31746533 | MS.gene44230:CDS | 35.0% |
! | AACTGATTCAAACGGAAATC+AGG | - | chr8.1:31749407-31749426 | None:intergenic | 35.0% |
! | AACTTTGGAGAAGAAGATGA+GGG | + | chr8.1:31747920-31747939 | MS.gene44230:CDS | 35.0% |
! | AGGAGGGAAGTTTTTATAGA+AGG | - | chr8.1:31748610-31748629 | None:intergenic | 35.0% |
! | AGTGATTTGGGCAAAATCTT+GGG | + | chr8.1:31746502-31746521 | MS.gene44230:CDS | 35.0% |
! | ATTTTCTTCTCATGCTTGAC+AGG | - | chr8.1:31747845-31747864 | None:intergenic | 35.0% |
! | CAAAGGATTGTTGTCTTTTG+TGG | + | chr8.1:31747703-31747722 | MS.gene44230:CDS | 35.0% |
! | GACCATAGTTTCTTTCCTTT+TGG | + | chr8.1:31747367-31747386 | MS.gene44230:intron | 35.0% |
! | GATTTTTACATCCGAGTCTT+GGG | + | chr8.1:31748453-31748472 | MS.gene44230:intron | 35.0% |
! | GGGAAGTTTTTATAGAAGGA+AGG | - | chr8.1:31748606-31748625 | None:intergenic | 35.0% |
! | GGTGTATCTGGATATGATTT+TGG | + | chr8.1:31748777-31748796 | MS.gene44230:CDS | 35.0% |
! | TCACTTAAAGCACCATATAG+AGG | - | chr8.1:31750898-31750917 | None:intergenic | 35.0% |
! | TGATTTTTACATCCGAGTCT+TGG | + | chr8.1:31748452-31748471 | MS.gene44230:intron | 35.0% |
! | TGCCATAGGCAATTTTTGAA+GGG | + | chr8.1:31750283-31750302 | MS.gene44230:intron | 35.0% |
! | TTTAGAACCATAGTTGTTGG+TGG | + | chr8.1:31750729-31750748 | MS.gene44230:intron | 35.0% |
!! | ATCTGGATATGATTTTGGTG+TGG | + | chr8.1:31748782-31748801 | MS.gene44230:CDS | 35.0% |
!! | GACACTGTTAGTCTTATTTG+CGG | + | chr8.1:31746244-31746263 | MS.gene44230:CDS | 35.0% |
!! | GAGAGTACCAAAGATTTAAG+AGG | - | chr8.1:31746553-31746572 | None:intergenic | 35.0% |
!!! | ACACCTATTTTTACTGGTGA+TGG | + | chr8.1:31748705-31748724 | MS.gene44230:CDS | 35.0% |
!!! | AGCCAACTCATAGTTTTTTG+AGG | + | chr8.1:31749946-31749965 | MS.gene44230:intron | 35.0% |
!!! | ATTTTTACTGGTGATGGAGA+AGG | + | chr8.1:31748711-31748730 | MS.gene44230:CDS | 35.0% |
!!! | CTCATAGTTTTTTGAGGGTT+TGG | + | chr8.1:31749952-31749971 | MS.gene44230:intron | 35.0% |
!!! | GCCAACTCATAGTTTTTTGA+GGG | + | chr8.1:31749947-31749966 | MS.gene44230:intron | 35.0% |
AAAAACACTTGGGGTCCATT+TGG | - | chr8.1:31746914-31746933 | None:intergenic | 40.0% | |
AACAGTCTCACAAGTGCTTA+TGG | + | chr8.1:31746862-31746881 | MS.gene44230:intron | 40.0% | |
AACATCTCCAAGGGTAGTTA+TGG | - | chr8.1:31749152-31749171 | None:intergenic | 40.0% | |
AAGCACTTGTGAGACTGTTT+GGG | - | chr8.1:31746861-31746880 | None:intergenic | 40.0% | |
AATATATGCTGGTGAGCCAA+CGG | - | chr8.1:31749183-31749202 | None:intergenic | 40.0% | |
AATTATGCGGTTGTCGAAAC+AGG | - | chr8.1:31746651-31746670 | None:intergenic | 40.0% | |
AATTGATCGAATTGCAGTGG+AGG | - | chr8.1:31746104-31746123 | None:intergenic | 40.0% | |
ACAACTTATCCCAGAAGAGA+AGG | - | chr8.1:31750001-31750020 | None:intergenic | 40.0% | |
ACATCTCCAAGGGTAGTTAT+GGG | - | chr8.1:31749151-31749170 | None:intergenic | 40.0% | |
ACGGCATTCCCATTTGAATT+GGG | + | chr8.1:31748102-31748121 | MS.gene44230:intron | 40.0% | |
ACTTATTTGAGCTTATCGGC+TGG | + | chr8.1:31747164-31747183 | MS.gene44230:intron | 40.0% | |
AGAATAAGAAGCAGCAGCAA+AGG | + | chr8.1:31747686-31747705 | MS.gene44230:CDS | 40.0% | |
ATGCTATGTTGGAGGAAATC+TGG | + | chr8.1:31746588-31746607 | MS.gene44230:intron | 40.0% | |
ATGGAGCTCAAAATCAATCC+AGG | - | chr8.1:31750603-31750622 | None:intergenic | 40.0% | |
ATTACACTTTCATCTGGGGA+TGG | + | chr8.1:31747471-31747490 | MS.gene44230:intron | 40.0% | |
CATTCTTCTTATGAGCCTGA+TGG | - | chr8.1:31751116-31751135 | None:intergenic | 40.0% | |
CCACTGCAATTCGATCAATT+AGG | + | chr8.1:31746104-31746123 | MS.gene44230:intron | 40.0% | |
CCAGCAAATCTTTGACAGAT+GGG | - | chr8.1:31750470-31750489 | None:intergenic | 40.0% | |
CCTAATTGATCGAATTGCAG+TGG | - | chr8.1:31746107-31746126 | None:intergenic | 40.0% | |
CCTAGAGATGAAAACAACCA+TGG | - | chr8.1:31748486-31748505 | None:intergenic | 40.0% | |
CTCTGTCGGATGTACTTATA+AGG | + | chr8.1:31748029-31748048 | MS.gene44230:CDS | 40.0% | |
CTTTGACAGATGGGTCATTT+GGG | - | chr8.1:31750461-31750480 | None:intergenic | 40.0% | |
GAATAGTTGCCTTCTCTTCT+GGG | + | chr8.1:31749989-31750008 | MS.gene44230:intron | 40.0% | |
GATCATCCATTGACATTGCA+AGG | - | chr8.1:31749583-31749602 | None:intergenic | 40.0% | |
GATTGAGCTTGAAATCGAGA+AGG | - | chr8.1:31746223-31746242 | None:intergenic | 40.0% | |
GCAAATACCACTGGGTTTAA+AGG | + | chr8.1:31750531-31750550 | MS.gene44230:intron | 40.0% | |
GCACCAAATTAGATTATGGG+AGG | - | chr8.1:31747811-31747830 | None:intergenic | 40.0% | |
GCACTTGACATTGTCAACTT+TGG | + | chr8.1:31747905-31747924 | MS.gene44230:CDS | 40.0% | |
GGAAAAATGCAACATCTCCA+AGG | - | chr8.1:31749162-31749181 | None:intergenic | 40.0% | |
GGCTCATAAGAAGAATGAAG+AGG | + | chr8.1:31751119-31751138 | MS.gene44230:intron | 40.0% | |
GGGTATCACTTCATTGAACA+TGG | + | chr8.1:31749893-31749912 | MS.gene44230:intron | 40.0% | |
GGTATAAGCACTTGTGAGAT+AGG | + | chr8.1:31747185-31747204 | MS.gene44230:intron | 40.0% | |
GTAAAGAGAGAGCCTCTATA+TGG | + | chr8.1:31750883-31750902 | MS.gene44230:intron | 40.0% | |
GTTTATTTGCGCGAAACTTC+TGG | + | chr8.1:31748652-31748671 | MS.gene44230:intron | 40.0% | |
TAAGCACTTGTGAGACTGTT+TGG | - | chr8.1:31746862-31746881 | None:intergenic | 40.0% | |
TACTGTTGGAGTTATGACCA+TGG | + | chr8.1:31746444-31746463 | MS.gene44230:CDS | 40.0% | |
TAGGCAGAGTTGAGTAGAAA+CGG | - | chr8.1:31748186-31748205 | None:intergenic | 40.0% | |
TATCTGCATCTCTTCCATCA+TGG | - | chr8.1:31749616-31749635 | None:intergenic | 40.0% | |
TCAAATAAGGCAATCCAAGC+AGG | + | chr8.1:31747017-31747036 | MS.gene44230:intron | 40.0% | |
TCAGAGCAAGAGCTAATTCA+GGG | - | chr8.1:31748821-31748840 | None:intergenic | 40.0% | |
TCCCCTCCCATAATCTAATT+TGG | + | chr8.1:31747805-31747824 | MS.gene44230:intron | 40.0% | |
TCTGAGAGTTTCAATGGAAG+AGG | + | chr8.1:31748836-31748855 | MS.gene44230:CDS | 40.0% | |
TCTGTATTGTCGTCTACCTA+TGG | + | chr8.1:31750698-31750717 | MS.gene44230:intron | 40.0% | |
TCTTCCTCAGGTCTAGAAAT+AGG | + | chr8.1:31747604-31747623 | MS.gene44230:intron | 40.0% | |
TCTTTGACAGATGGGTCATT+TGG | - | chr8.1:31750462-31750481 | None:intergenic | 40.0% | |
TGAACATGGGATGCTTTGTA+TGG | + | chr8.1:31749907-31749926 | MS.gene44230:intron | 40.0% | |
TGAAGTTCCTTTAAACCCAG+TGG | - | chr8.1:31750541-31750560 | None:intergenic | 40.0% | |
TGAATAGTTGCCTTCTCTTC+TGG | + | chr8.1:31749988-31750007 | MS.gene44230:intron | 40.0% | |
TGAGAATGCTCTTCTACAAC+AGG | + | chr8.1:31749556-31749575 | MS.gene44230:CDS | 40.0% | |
TGCAAGGACATGAGATACAA+AGG | - | chr8.1:31750158-31750177 | None:intergenic | 40.0% | |
TGGTTACAATGTAGGATGGT+GGG | + | chr8.1:31746608-31746627 | MS.gene44230:intron | 40.0% | |
TGTAAATGCTATGGGTACAG+AGG | + | chr8.1:31749250-31749269 | MS.gene44230:intron | 40.0% | |
TGTCATTCCACTAATCAGTG+TGG | - | chr8.1:31750381-31750400 | None:intergenic | 40.0% | |
TTACATCCCATAACTACCCT+TGG | + | chr8.1:31749142-31749161 | MS.gene44230:intron | 40.0% | |
TTGTCAGGTTCTGCTATCTA+GGG | + | chr8.1:31747128-31747147 | MS.gene44230:intron | 40.0% | |
TTTGTCAGGTTCTGCTATCT+AGG | + | chr8.1:31747127-31747146 | MS.gene44230:intron | 40.0% | |
! | ACTTTGGAGAAGAAGATGAG+GGG | + | chr8.1:31747921-31747940 | MS.gene44230:CDS | 40.0% |
! | ATTTTGCCCAAATCACTGGT+AGG | - | chr8.1:31746499-31746518 | None:intergenic | 40.0% |
! | CAACTTTGGAGAAGAAGATG+AGG | + | chr8.1:31747919-31747938 | MS.gene44230:CDS | 40.0% |
! | CAAGATTTTGCCCAAATCAC+TGG | - | chr8.1:31746503-31746522 | None:intergenic | 40.0% |
! | CAGTGATTTGGGCAAAATCT+TGG | + | chr8.1:31746501-31746520 | MS.gene44230:CDS | 40.0% |
! | CATGATGATTGATCTGGTTC+TGG | + | chr8.1:31749783-31749802 | MS.gene44230:intron | 40.0% |
! | CTGCCATAGGCAATTTTTGA+AGG | + | chr8.1:31750282-31750301 | MS.gene44230:intron | 40.0% |
! | GAGATGTTGCATTTTTCCGT+TGG | + | chr8.1:31749164-31749183 | MS.gene44230:intron | 40.0% |
! | GGATTGTTGTCTTTTGTGGA+AGG | + | chr8.1:31747707-31747726 | MS.gene44230:CDS | 40.0% |
! | TATTTGCGGTGCTAAAACTC+AGG | + | chr8.1:31746258-31746277 | MS.gene44230:CDS | 40.0% |
! | TCTGCTATCTAGGGTCTATT+TGG | + | chr8.1:31747137-31747156 | MS.gene44230:intron | 40.0% |
! | TGATTGAATTTGGCTTCACC+TGG | + | chr8.1:31750582-31750601 | MS.gene44230:intron | 40.0% |
! | TTAGGTTGTGGAAGTTTGTC+AGG | + | chr8.1:31747113-31747132 | MS.gene44230:intron | 40.0% |
! | TTTTGCCCAAATCACTGGTA+GGG | - | chr8.1:31746498-31746517 | None:intergenic | 40.0% |
!! | AAGCACTTGTGAGAGTGTTT+GGG | - | chr8.1:31746981-31747000 | None:intergenic | 40.0% |
!! | AGGAGTACTGGAAGAATTCA+TGG | - | chr8.1:31748314-31748333 | None:intergenic | 40.0% |
!! | CCATGGTTGTTTTCATCTCT+AGG | + | chr8.1:31748483-31748502 | MS.gene44230:intron | 40.0% |
!! | GGTTGTTTTCATCTCTAGGT+TGG | + | chr8.1:31748487-31748506 | MS.gene44230:intron | 40.0% |
!! | TAAGCACTTGTGAGAGTGTT+TGG | - | chr8.1:31746982-31747001 | None:intergenic | 40.0% |
!! | TACGTTGGACTGATTTTGCA+TGG | - | chr8.1:31750496-31750515 | None:intergenic | 40.0% |
!! | TCTTGCTCTGAGAGTTTCAA+TGG | + | chr8.1:31748830-31748849 | MS.gene44230:CDS | 40.0% |
!! | TTTTGGTGTGGATCCAAACT+TGG | + | chr8.1:31748794-31748813 | MS.gene44230:CDS | 40.0% |
!!! | GACACTTTTTCTGTGTGAAC+TGG | + | chr8.1:31749512-31749531 | MS.gene44230:intron | 40.0% |
!!! | GGCAGTACACCTATTTTTAC+TGG | + | chr8.1:31748699-31748718 | MS.gene44230:intron | 40.0% |
AGAGTTGAGTAGAAACGGCA+GGG | - | chr8.1:31748181-31748200 | None:intergenic | 45.0% | |
AGTGCTCTATGCTATGTTGG+AGG | + | chr8.1:31746580-31746599 | MS.gene44230:intron | 45.0% | |
ATCAACCCAGTTAGCACTAC+TGG | + | chr8.1:31748357-31748376 | MS.gene44230:intron | 45.0% | |
ATGGCTAAACACCCAAGACT+CGG | - | chr8.1:31748467-31748486 | None:intergenic | 45.0% | |
CACGGCATTCCCATTTGAAT+TGG | + | chr8.1:31748101-31748120 | MS.gene44230:intron | 45.0% | |
CCACTAATCAGTGTGGTCAA+TGG | - | chr8.1:31750374-31750393 | None:intergenic | 45.0% | |
CCCATCTGTCAAAGATTTGC+TGG | + | chr8.1:31750467-31750486 | MS.gene44230:CDS | 45.0% | |
CGAAGTGACTAGATTGTTGG+CGG | + | chr8.1:31750126-31750145 | MS.gene44230:CDS | 45.0% | |
CTAATCAGTGTGGTCAATGG+CGG | - | chr8.1:31750371-31750390 | None:intergenic | 45.0% | |
CTAGAGGGGGGAAAAACAAA+CGG | - | chr8.1:31748523-31748542 | None:intergenic | 45.0% | |
CTCAGAGCAAGAGCTAATTC+AGG | - | chr8.1:31748822-31748841 | None:intergenic | 45.0% | |
CTGGTTACAATGTAGGATGG+TGG | + | chr8.1:31746607-31746626 | MS.gene44230:intron | 45.0% | |
CTTCCATCATGGTTAACTGC+AGG | - | chr8.1:31749605-31749624 | None:intergenic | 45.0% | |
GATCCTGCAGTTAACCATGA+TGG | + | chr8.1:31749599-31749618 | MS.gene44230:CDS | 45.0% | |
GATGCTTCCAAACAGGAGAA+AGG | + | chr8.1:31748900-31748919 | MS.gene44230:CDS | 45.0% | |
GCCAGCAAATCTTTGACAGA+TGG | - | chr8.1:31750471-31750490 | None:intergenic | 45.0% | |
GCTAATTCAGGGTCCAAGTT+TGG | - | chr8.1:31748810-31748829 | None:intergenic | 45.0% | |
GGACGAAGTGACTAGATTGT+TGG | + | chr8.1:31750123-31750142 | MS.gene44230:CDS | 45.0% | |
TAGTGCATGAGTCATGATGG+TGG | - | chr8.1:31749084-31749103 | None:intergenic | 45.0% | |
TCCTCAGGTCTAGAAATAGG+CGG | + | chr8.1:31747607-31747626 | MS.gene44230:intron | 45.0% | |
TCTACCCCTACCAGTGATTT+GGG | + | chr8.1:31746490-31746509 | MS.gene44230:CDS | 45.0% | |
TTAAATGGCGGCAATTGCAG+TGG | + | chr8.1:31750245-31750264 | MS.gene44230:intron | 45.0% | |
TTTGCCCAAATCACTGGTAG+GGG | - | chr8.1:31746497-31746516 | None:intergenic | 45.0% | |
! | AGTACATCCGACAGAGCATT+TGG | - | chr8.1:31748025-31748044 | None:intergenic | 45.0% |
! | CACAGTTGGCTCTTAAGCAT+CGG | + | chr8.1:31747662-31747681 | MS.gene44230:CDS | 45.0% |
! | CCATTGACCACACTGATTAG+TGG | + | chr8.1:31750371-31750390 | MS.gene44230:intron | 45.0% |
!! | CTTTGTTTCTGCAGCTTCCT+GGG | + | chr8.1:31750430-31750449 | MS.gene44230:intron | 45.0% |
!! | TCTTTGTTTCTGCAGCTTCC+TGG | + | chr8.1:31750429-31750448 | MS.gene44230:intron | 45.0% |
!! | TTTACTGGTGATGGAGAAGG+TGG | + | chr8.1:31748714-31748733 | MS.gene44230:CDS | 45.0% |
!! | TTTGTTTCTGCAGCTTCCTG+GGG | + | chr8.1:31750431-31750450 | MS.gene44230:intron | 45.0% |
!! | TTTTGAAGGGATACCCACCA+TGG | + | chr8.1:31750296-31750315 | MS.gene44230:intron | 45.0% |
!! | TTTAAATAAAATAATTTAGT+AGG | - | chr8.1:31750198-31750217 | None:intergenic | 5.0% |
AAACCTAGCTGCTGCCATTC+AGG | + | chr8.1:31747636-31747655 | MS.gene44230:CDS | 50.0% | |
AATAACACTTGGGGCCTGCT+TGG | - | chr8.1:31747034-31747053 | None:intergenic | 50.0% | |
ACAGGCCCTTGCAATGTCAA+TGG | + | chr8.1:31749574-31749593 | MS.gene44230:CDS | 50.0% | |
ACCTGGTCCAAATGCTCTGT+CGG | + | chr8.1:31748015-31748034 | MS.gene44230:CDS | 50.0% | |
AGACGCGACGAGAGATGAAA+TGG | - | chr8.1:31750622-31750641 | None:intergenic | 50.0% | |
AGCATGCCAGTAGTGCTAAC+TGG | - | chr8.1:31748366-31748385 | None:intergenic | 50.0% | |
AGCTACAGATGACCCTGAGT+TGG | + | chr8.1:31749646-31749665 | MS.gene44230:CDS | 50.0% | |
AGGTGTACTGCCACAACACA+AGG | - | chr8.1:31748691-31748710 | None:intergenic | 50.0% | |
CAAAACTCGAACTCCCTTCC+CGG | - | chr8.1:31746470-31746489 | None:intergenic | 50.0% | |
CAATCTAGTCACTTCGTCCG+TGG | - | chr8.1:31750122-31750141 | None:intergenic | 50.0% | |
CACATGGTTCATGTTCCACC+TGG | + | chr8.1:31747998-31748017 | MS.gene44230:CDS | 50.0% | |
CACTTGGGGTCCATTTGGAT+TGG | - | chr8.1:31746909-31746928 | None:intergenic | 50.0% | |
CAGAGTTGAGTAGAAACGGC+AGG | - | chr8.1:31748182-31748201 | None:intergenic | 50.0% | |
CAGGTGGAACATGAACCATG+TGG | - | chr8.1:31748000-31748019 | None:intergenic | 50.0% | |
CAGTACAGAAGCTGAGCCTA+TGG | + | chr8.1:31748971-31748990 | MS.gene44230:CDS | 50.0% | |
CATAGGCTCAGCTTCTGTAC+TGG | - | chr8.1:31748973-31748992 | None:intergenic | 50.0% | |
CTCGGTCATAGTTGCATCCT+GGG | - | chr8.1:31748946-31748965 | None:intergenic | 50.0% | |
GAGTCTTGGGTGTTTAGCCA+TGG | + | chr8.1:31748466-31748485 | MS.gene44230:intron | 50.0% | |
GCATGCCAGTAGTGCTAACT+GGG | - | chr8.1:31748365-31748384 | None:intergenic | 50.0% | |
GCTTCCAAACAGGAGAAAGG+CGG | + | chr8.1:31748903-31748922 | MS.gene44230:CDS | 50.0% | |
GGGGAAAAACAAACGGAGCA+AGG | - | chr8.1:31748516-31748535 | None:intergenic | 50.0% | |
GTCAGTATCAGACACCACCA+CGG | + | chr8.1:31750102-31750121 | MS.gene44230:CDS | 50.0% | |
GTCTACCCCTACCAGTGATT+TGG | + | chr8.1:31746489-31746508 | MS.gene44230:CDS | 50.0% | |
GTTGGAGTTATGACCATGGC+CGG | + | chr8.1:31746448-31746467 | MS.gene44230:CDS | 50.0% | |
TGAAGAGGAGGGACCAAATG+AGG | + | chr8.1:31751134-31751153 | MS.gene44230:CDS | 50.0% | |
TGCAGAGGATGCTTCCAAAC+AGG | + | chr8.1:31748893-31748912 | MS.gene44230:CDS | 50.0% | |
TTGGAGTTATGACCATGGCC+GGG | + | chr8.1:31746449-31746468 | MS.gene44230:CDS | 50.0% | |
! | TGCATCGGCAGCTATGTGTA+TGG | + | chr8.1:31747407-31747426 | MS.gene44230:intron | 50.0% |
!! | AACTGGCTTTCACGTGGAAC+AGG | + | chr8.1:31749529-31749548 | MS.gene44230:intron | 50.0% |
!! | ACCGCCTATTTCTAGACCTG+AGG | - | chr8.1:31747611-31747630 | None:intergenic | 50.0% |
!! | AGCTTCTGTACTGGTTCGCT+CGG | - | chr8.1:31748964-31748983 | None:intergenic | 50.0% |
!! | TGTGTGAACTGGCTTTCACG+TGG | + | chr8.1:31749523-31749542 | MS.gene44230:intron | 50.0% |
AACTCACCTCGAGCCAACTC+AGG | - | chr8.1:31749662-31749681 | None:intergenic | 55.0% | |
ACTCACCTCGAGCCAACTCA+GGG | - | chr8.1:31749661-31749680 | None:intergenic | 55.0% | |
AGCCAACTGTGCCACCTGAA+TGG | - | chr8.1:31747653-31747672 | None:intergenic | 55.0% | |
AGCTGCGAAAAAGGCTGCAG+AGG | + | chr8.1:31748878-31748897 | MS.gene44230:CDS | 55.0% | |
AGTTATGACCATGGCCGGGA+AGG | + | chr8.1:31746453-31746472 | MS.gene44230:CDS | 55.0% | |
CAATGGAAGAGGAGAGAGCC+AGG | + | chr8.1:31748847-31748866 | MS.gene44230:CDS | 55.0% | |
CACACTGTCATGGGGATGGA+TGG | + | chr8.1:31747437-31747456 | MS.gene44230:intron | 55.0% | |
CATCCATCCCCATGACAGTG+TGG | - | chr8.1:31747439-31747458 | None:intergenic | 55.0% | |
CTCACCGCCTTTCTCCTGTT+TGG | - | chr8.1:31748910-31748929 | None:intergenic | 55.0% | |
GCAAGTGCCACACTGTCATG+GGG | + | chr8.1:31747429-31747448 | MS.gene44230:intron | 55.0% | |
GCAGGAAGCAGCTGCGAAAA+AGG | + | chr8.1:31748869-31748888 | MS.gene44230:CDS | 55.0% | |
GCTCGGTCATAGTTGCATCC+TGG | - | chr8.1:31748947-31748966 | None:intergenic | 55.0% | |
GGCAAGTGCCACACTGTCAT+GGG | + | chr8.1:31747428-31747447 | MS.gene44230:intron | 55.0% | |
GTTATGACCATGGCCGGGAA+GGG | + | chr8.1:31746454-31746473 | MS.gene44230:CDS | 55.0% | |
TCCAGATACACCACCTGCAG+AGG | - | chr8.1:31748769-31748788 | None:intergenic | 55.0% | |
TCTAGTCACTTCGTCCGTGG+TGG | - | chr8.1:31750119-31750138 | None:intergenic | 55.0% | |
TGAGCAGCAAGCTACTTCCC+AGG | + | chr8.1:31748926-31748945 | MS.gene44230:CDS | 55.0% | |
TGAGGGGAAGACAGAGAAGC+TGG | + | chr8.1:31747937-31747956 | MS.gene44230:CDS | 55.0% | |
TGCCATTCAGGTGGCACAGT+TGG | + | chr8.1:31747648-31747667 | MS.gene44230:CDS | 55.0% | |
TGGCAAGTGCCACACTGTCA+TGG | + | chr8.1:31747427-31747446 | MS.gene44230:intron | 55.0% | |
! | GACAGAGCATTTGGACCAGG+TGG | - | chr8.1:31748016-31748035 | None:intergenic | 55.0% |
! | TCAGTGTGGTCAATGGCGGA+AGG | - | chr8.1:31750367-31750386 | None:intergenic | 55.0% |
! | TCCGACAGAGCATTTGGACC+AGG | - | chr8.1:31748019-31748038 | None:intergenic | 55.0% |
!! | GGTGATGGAGAAGGTGGAAG+CGG | + | chr8.1:31748720-31748739 | MS.gene44230:CDS | 55.0% |
ACCCACCATGGCTGCTCCAT+AGG | + | chr8.1:31750308-31750327 | MS.gene44230:intron | 60.0% | |
CCACCTGAATGGCAGCAGCT+AGG | - | chr8.1:31747642-31747661 | None:intergenic | 60.0% | |
CCTAGCTGCTGCCATTCAGG+TGG | + | chr8.1:31747639-31747658 | MS.gene44230:CDS | 60.0% | |
GCCTATGGAGCAGCCATGGT+GGG | - | chr8.1:31750312-31750331 | None:intergenic | 60.0% | |
GCCTCTGCAGGTGGTGTATC+TGG | + | chr8.1:31748765-31748784 | MS.gene44230:CDS | 60.0% | |
GGGTCATTTGGGTCAACCCC+AGG | - | chr8.1:31750450-31750469 | None:intergenic | 60.0% | |
GTGCCACACTGTCATGGGGA+TGG | + | chr8.1:31747433-31747452 | MS.gene44230:intron | 60.0% | |
TGCCTATGGAGCAGCCATGG+TGG | - | chr8.1:31750313-31750332 | None:intergenic | 60.0% | |
TGCTGCCTATGGAGCAGCCA+TGG | - | chr8.1:31750316-31750335 | None:intergenic | 60.0% | |
TTTCGCAGCTGCTTCCTGCC+TGG | - | chr8.1:31748868-31748887 | None:intergenic | 60.0% | |
! | GTGTGGTCAATGGCGGAAGG+AGG | - | chr8.1:31750364-31750383 | None:intergenic | 60.0% |
!! | GATGACCCTGAGTTGGCTCG+AGG | + | chr8.1:31749653-31749672 | MS.gene44230:CDS | 60.0% |
GGAAGAGGAGAGAGCCAGGC+AGG | + | chr8.1:31748851-31748870 | MS.gene44230:CDS | 65.0% | |
TCGAACTCCCTTCCCGGCCA+TGG | - | chr8.1:31746464-31746483 | None:intergenic | 65.0% | |
GCAGCAGCAGCCTCTGCAGG+TGG | + | chr8.1:31748756-31748775 | MS.gene44230:CDS | 70.0% | |
GCTGCAGCAGCAGCCTCTGC+AGG | + | chr8.1:31748753-31748772 | MS.gene44230:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 31746043 | 31751161 | 31746043 | ID=MS.gene44230 |
chr8.1 | mRNA | 31746043 | 31751161 | 31746043 | ID=MS.gene44230.t1;Parent=MS.gene44230 |
chr8.1 | exon | 31746043 | 31746054 | 31746043 | ID=MS.gene44230.t1.exon1;Parent=MS.gene44230.t1 |
chr8.1 | CDS | 31746043 | 31746054 | 31746043 | ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1 |
chr8.1 | exon | 31746166 | 31746279 | 31746166 | ID=MS.gene44230.t1.exon2;Parent=MS.gene44230.t1 |
chr8.1 | CDS | 31746166 | 31746279 | 31746166 | ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1 |
chr8.1 | exon | 31746430 | 31746535 | 31746430 | ID=MS.gene44230.t1.exon3;Parent=MS.gene44230.t1 |
chr8.1 | CDS | 31746430 | 31746535 | 31746430 | ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1 |
chr8.1 | exon | 31747614 | 31747728 | 31747614 | ID=MS.gene44230.t1.exon4;Parent=MS.gene44230.t1 |
chr8.1 | CDS | 31747614 | 31747728 | 31747614 | ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1 |
chr8.1 | exon | 31747841 | 31748050 | 31747841 | ID=MS.gene44230.t1.exon5;Parent=MS.gene44230.t1 |
chr8.1 | CDS | 31747841 | 31748050 | 31747841 | ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1 |
chr8.1 | exon | 31748704 | 31748992 | 31748704 | ID=MS.gene44230.t1.exon6;Parent=MS.gene44230.t1 |
chr8.1 | CDS | 31748704 | 31748992 | 31748704 | ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1 |
chr8.1 | exon | 31749551 | 31749674 | 31749551 | ID=MS.gene44230.t1.exon7;Parent=MS.gene44230.t1 |
chr8.1 | CDS | 31749551 | 31749674 | 31749551 | ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1 |
chr8.1 | exon | 31750092 | 31750180 | 31750092 | ID=MS.gene44230.t1.exon8;Parent=MS.gene44230.t1 |
chr8.1 | CDS | 31750092 | 31750180 | 31750092 | ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1 |
chr8.1 | exon | 31750444 | 31750512 | 31750444 | ID=MS.gene44230.t1.exon9;Parent=MS.gene44230.t1 |
chr8.1 | CDS | 31750444 | 31750512 | 31750444 | ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1 |
chr8.1 | exon | 31751120 | 31751161 | 31751120 | ID=MS.gene44230.t1.exon10;Parent=MS.gene44230.t1 |
chr8.1 | CDS | 31751120 | 31751161 | 31751120 | ID=cds.MS.gene44230.t1;Parent=MS.gene44230.t1 |
Gene Sequence |
Protein sequence |