Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67460.t1 | XP_003612199.1 | 95.5 | 398 | 18 | 0 | 1 | 398 | 1 | 398 | 1.00E-156 | 563.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67460.t1 | O82143 | 71.0 | 404 | 108 | 3 | 1 | 397 | 1 | 402 | 1.6e-91 | 337.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67460.t1 | G7JXI6 | 95.5 | 398 | 18 | 0 | 1 | 398 | 1 | 398 | 7.2e-157 | 563.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67460.t1 | MTR_5g022440 | 99.246 | 398 | 3 | 0 | 1 | 398 | 1 | 398 | 0.0 | 803 |
| MS.gene67460.t1 | MTR_8g075390 | 80.597 | 402 | 59 | 5 | 1 | 396 | 1 | 389 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67460.t1 | AT4G38630 | 65.174 | 402 | 120 | 8 | 1 | 398 | 1 | 386 | 6.25e-170 | 480 |
Find 99 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGCAGCTGCAGCTGCAGC+TGG | 0.162849 | 5.1:+13473273 | MS.gene67460:CDS |
| GCGCTTGATGTAGTTAATTT+TGG | 0.206385 | 5.1:+13472968 | MS.gene67460:CDS |
| CGGAAAGGGTGTTCGTGTTT+TGG | 0.243942 | 5.1:+13471532 | MS.gene67460:CDS |
| CAAAACACGAACACCCTTTC+CGG | 0.267611 | 5.1:-13471531 | None:intergenic |
| CAATAAGACAACTGATTTGA+TGG | 0.280153 | 5.1:+13473500 | MS.gene67460:CDS |
| CTGCAGCTGCAGCTGCAGCT+GGG | 0.291472 | 5.1:+13473274 | MS.gene67460:CDS |
| TATTTCTTCTCCTCATTTGA+TGG | 0.295179 | 5.1:-13476559 | None:intergenic |
| TGAGCCTCCTTTCTCTTGTT+TGG | 0.297999 | 5.1:-13473427 | None:intergenic |
| CAAAGGATTATTGTCTTTGC+TGG | 0.298005 | 5.1:+13472793 | MS.gene67460:CDS |
| GGTGGAACTGGATATGATTT+TGG | 0.301276 | 5.1:+13473297 | MS.gene67460:CDS |
| CCCTTCTATCAAAGATTTGC+TGG | 0.304569 | 5.1:+13475895 | MS.gene67460:CDS |
| GAACCTAGCTGCTGGTATTC+AGG | 0.311840 | 5.1:+13472726 | MS.gene67460:CDS |
| TCCCCATCGCCAGTGAAAAT+TGG | 0.318823 | 5.1:-13473228 | None:intergenic |
| TAATTCCTTTGGCAGCTTCC+CGG | 0.320953 | 5.1:+13475857 | MS.gene67460:intron |
| CTCTTTCTGATGTACTTATA+AGG | 0.321346 | 5.1:+13473092 | MS.gene67460:CDS |
| CTCTTCCATTGAAACTCTTA+AGG | 0.337538 | 5.1:-13473355 | None:intergenic |
| GCCAATTCAGGATCCAAGTT+TGG | 0.345821 | 5.1:-13473327 | None:intergenic |
| AGACTAACCTCAGATTGATT+TGG | 0.348582 | 5.1:-13475926 | None:intergenic |
| TACAGTTGGAGTTCTTATAA+TGG | 0.358277 | 5.1:+13471508 | MS.gene67460:CDS |
| ACTGATTCAGGACTAGAAAT+AGG | 0.363462 | 5.1:+13472694 | MS.gene67460:intron |
| AATTCCTTTGGCAGCTTCCC+GGG | 0.364317 | 5.1:+13475858 | MS.gene67460:intron |
| TCCAAACTTGGATCCTGAAT+TGG | 0.370635 | 5.1:+13473326 | MS.gene67460:CDS |
| AAGAAAATGTTGGAGATGAT+AGG | 0.372029 | 5.1:+13472920 | MS.gene67460:CDS |
| TGCAGCTGCAGCTGCAGCTG+GGG | 0.384116 | 5.1:+13473275 | MS.gene67460:CDS |
| GCCAGCAAATCTTTGATAGA+AGG | 0.388474 | 5.1:-13475896 | None:intergenic |
| TGGTATTCAGGTGGCACAAT+TGG | 0.403899 | 5.1:+13472738 | MS.gene67460:CDS |
| ATCTCACCTAGTGCCAGCTC+AGG | 0.409983 | 5.1:-13474554 | None:intergenic |
| CTTAAGGCAAGAGCCAATTC+AGG | 0.410841 | 5.1:-13473339 | None:intergenic |
| AGTACATCAGAAAGAGCATT+TGG | 0.417355 | 5.1:-13473085 | None:intergenic |
| TACTATCCGCTACTGACAAC+TGG | 0.419717 | 5.1:-13475689 | None:intergenic |
| AGCGGATAGTACAGGGGATC+AGG | 0.434310 | 5.1:+13475701 | MS.gene67460:CDS |
| CTTAAGAGTTTCAATGGAAG+AGG | 0.440830 | 5.1:+13473356 | MS.gene67460:CDS |
| TTGCAAGCGCTTGCTGCAGT+AGG | 0.440883 | 5.1:-13474460 | None:intergenic |
| TTGAATAATACAGTCGAATC+CGG | 0.440886 | 5.1:+13471481 | MS.gene67460:intron |
| GCAGCTGCAGCTGCAGCTGG+GGG | 0.443828 | 5.1:+13473276 | MS.gene67460:CDS |
| AAGCGATCTAGGCAAGATAT+TGG | 0.447295 | 5.1:+13471565 | MS.gene67460:CDS |
| ATCTTGCCTAGATCGCTTGT+AGG | 0.451316 | 5.1:-13471560 | None:intergenic |
| TGAAGCAAAGACTGAGAAGC+TGG | 0.459635 | 5.1:+13473000 | MS.gene67460:CDS |
| CTTAAATCATGGCCAACTGC+AGG | 0.460862 | 5.1:-13474497 | None:intergenic |
| GAAAGAGCATTTGGACCAGC+TGG | 0.461973 | 5.1:-13473076 | None:intergenic |
| GTCACGCCTACAAGCGATCT+AGG | 0.462781 | 5.1:+13471554 | MS.gene67460:CDS |
| GTCAGACGTGACTAGATTGT+TGG | 0.472662 | 5.1:+13475731 | MS.gene67460:CDS |
| AAGATATTGGCTTGCATGCA+TGG | 0.473341 | 5.1:+13471578 | MS.gene67460:CDS |
| GGAAGAGGAAAGAGCTAGGC+AGG | 0.474797 | 5.1:+13473371 | MS.gene67460:CDS |
| CAGCTGGAACATGAACGATA+TGG | 0.476638 | 5.1:-13473060 | None:intergenic |
| ATTTAGGTTAACCTGAGTCT+TGG | 0.480341 | 5.1:-13471133 | None:intergenic |
| ACAATCTAGTCACGTCTGAC+TGG | 0.487951 | 5.1:-13475728 | None:intergenic |
| GGCGATGGGGAAGGTGGAAG+CGG | 0.487998 | 5.1:+13473240 | MS.gene67460:CDS |
| TTGTCAGTAGCGGATAGTAC+AGG | 0.488303 | 5.1:+13475693 | MS.gene67460:CDS |
| AACCTCAGATTGATTTGGAA+TGG | 0.493549 | 5.1:-13475921 | None:intergenic |
| TGCAAGCGCTTGCTGCAGTA+GGG | 0.495910 | 5.1:-13474459 | None:intergenic |
| TGCTTCAGAAGTTGATGCAC+TGG | 0.500973 | 5.1:-13473475 | None:intergenic |
| TGCAGCTGCAGCTGCAGCAG+CGG | 0.504256 | 5.1:-13473268 | None:intergenic |
| AGAAAATGTTGGAGATGATA+GGG | 0.513265 | 5.1:+13472921 | MS.gene67460:CDS |
| TCTTGCCTTAAGAGTTTCAA+TGG | 0.516561 | 5.1:+13473350 | MS.gene67460:CDS |
| TATCTGTATCTCTTAAATCA+TGG | 0.517719 | 5.1:-13474508 | None:intergenic |
| GTTGGAGTTCTTATAATGGC+CGG | 0.522830 | 5.1:+13471512 | MS.gene67460:CDS |
| GTTCTTATAATGGCCGGAAA+GGG | 0.529679 | 5.1:+13471518 | MS.gene67460:CDS |
| GATGCTGTTAATCTCATTTG+CGG | 0.530412 | 5.1:+13471108 | MS.gene67460:CDS |
| GGATTATTGTCTTTGCTGGA+AGG | 0.537771 | 5.1:+13472797 | MS.gene67460:CDS |
| GAAGCATGAAAAGAAAATGT+TGG | 0.539117 | 5.1:+13472910 | MS.gene67460:CDS |
| ATCTGCAGATGACCCTGAGC+TGG | 0.542125 | 5.1:+13474541 | MS.gene67460:CDS |
| AGTTCTTATAATGGCCGGAA+AGG | 0.543234 | 5.1:+13471517 | MS.gene67460:CDS |
| CATTTGCGGTGCCAAGACTC+AGG | 0.548520 | 5.1:+13471122 | MS.gene67460:CDS |
| ATCTTCAACCATGGTGCTCG+AGG | 0.555601 | 5.1:+13470919 | None:intergenic |
| CCAGCAAATCTTTGATAGAA+GGG | 0.562714 | 5.1:-13475895 | None:intergenic |
| TGATGACAAGCCATCAAATG+AGG | 0.567204 | 5.1:+13476549 | MS.gene67460:CDS |
| TGTCAGTAGCGGATAGTACA+GGG | 0.567328 | 5.1:+13475694 | MS.gene67460:CDS |
| TTCACTGGCGATGGGGAAGG+TGG | 0.567749 | 5.1:+13473234 | MS.gene67460:CDS |
| CATATCGTTCATGTTCCAGC+TGG | 0.573598 | 5.1:+13473061 | MS.gene67460:CDS |
| TCTGTATTGACAATTCTGAA+TGG | 0.573905 | 5.1:+13471040 | MS.gene67460:CDS |
| CAATGGAAGAGGAAAGAGCT+AGG | 0.574068 | 5.1:+13473367 | MS.gene67460:CDS |
| GCAAGCGCTTGCAATGTCAA+TGG | 0.578213 | 5.1:+13474469 | MS.gene67460:CDS |
| TTAAATCATGGCCAACTGCA+GGG | 0.584949 | 5.1:-13474496 | None:intergenic |
| ATTCCTTTGGCAGCTTCCCG+GGG | 0.587464 | 5.1:+13475859 | MS.gene67460:intron |
| GATGCTGCCAAACAAGAGAA+AGG | 0.587529 | 5.1:+13473420 | MS.gene67460:CDS |
| CGCAAGAATATCAGATACAC+GGG | 0.590827 | 5.1:-13475763 | None:intergenic |
| CCACCTGAATACCAGCAGCT+AGG | 0.595708 | 5.1:-13472729 | None:intergenic |
| GGTGAGATGAACCTAGCTGC+TGG | 0.597381 | 5.1:+13472718 | MS.gene67460:CDS |
| GGGTCATTTATGTCAACCCC+GGG | 0.601962 | 5.1:-13475875 | None:intergenic |
| TCGAATCCGGAAAATACAGT+TGG | 0.607578 | 5.1:+13471494 | MS.gene67460:CDS |
| GATGACCCTGAGCTGGCACT+AGG | 0.611948 | 5.1:+13474548 | MS.gene67460:CDS |
| AGGGTCATTTATGTCAACCC+CGG | 0.615942 | 5.1:-13475876 | None:intergenic |
| TGTATCTGATATTCTTGCGT+CGG | 0.618378 | 5.1:+13475767 | MS.gene67460:CDS |
| AATTCTGAATGGATGCGTAA+CGG | 0.621250 | 5.1:+13471051 | MS.gene67460:CDS |
| TCAATGGATGACCCTGCAGT+TGG | 0.633492 | 5.1:+13474485 | MS.gene67460:CDS |
| ATCCATTCCAAATCAATCTG+AGG | 0.635456 | 5.1:+13475919 | MS.gene67460:CDS |
| AGCTCTCCAGTTGTCAGTAG+CGG | 0.637025 | 5.1:+13475683 | MS.gene67460:intron |
| ACGCAAGAATATCAGATACA+CGG | 0.643826 | 5.1:-13475764 | None:intergenic |
| TCTCACCTAGTGCCAGCTCA+GGG | 0.643932 | 5.1:-13474553 | None:intergenic |
| GCTTGAGCTTGAAATCGAGA+AGG | 0.649113 | 5.1:-13471084 | None:intergenic |
| ACAAGATGCGACAATGACTG+AGG | 0.653586 | 5.1:+13473449 | MS.gene67460:CDS |
| CAAGATGCGACAATGACTGA+GGG | 0.656289 | 5.1:+13473450 | MS.gene67460:CDS |
| CCTAGCTGCTGGTATTCAGG+TGG | 0.660293 | 5.1:+13472729 | MS.gene67460:CDS |
| ATAAATTACCTCGAGCACCA+TGG | 0.693882 | 5.1:-13470927 | None:intergenic |
| GCTGCCAAACAAGAGAAAGG+AGG | 0.696072 | 5.1:+13473423 | MS.gene67460:CDS |
| GATTCAGGACTAGAAATAGG+CGG | 0.712728 | 5.1:+13472697 | MS.gene67460:intron |
| GTCAGTAGCGGATAGTACAG+GGG | 0.716711 | 5.1:+13475695 | MS.gene67460:CDS |
| TTGTTTGGCAGCATCCTCTG+CGG | 0.738209 | 5.1:-13473412 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAATATAATTTAAAAG+AGG | - | chr5.1:13476066-13476085 | None:intergenic | 10.0% |
| !! | AAATAATTAACAAGATTAAT+AGG | + | chr5.1:13472091-13472110 | MS.gene67460:intron | 10.0% |
| !! | AACAAATATAATTTAAAAGA+GGG | - | chr5.1:13476065-13476084 | None:intergenic | 10.0% |
| !! | AACAATAATGATTAAATAAA+GGG | - | chr5.1:13471195-13471214 | None:intergenic | 10.0% |
| !! | TCCTATTATTATTATTATTT+GGG | + | chr5.1:13471839-13471858 | MS.gene67460:intron | 10.0% |
| !! | TTCCTATTATTATTATTATT+TGG | + | chr5.1:13471838-13471857 | MS.gene67460:intron | 10.0% |
| !!! | TTATTTCCAATTTTTTTTAA+GGG | + | chr5.1:13476310-13476329 | MS.gene67460:intron | 10.0% |
| !!! | TTTATTTCCAATTTTTTTTA+AGG | + | chr5.1:13476309-13476328 | MS.gene67460:intron | 10.0% |
| !! | AAATTGGAAATAAATATAAC+AGG | - | chr5.1:13476303-13476322 | None:intergenic | 15.0% |
| !! | ACAAATATAATTTAAAAGAG+GGG | - | chr5.1:13476064-13476083 | None:intergenic | 15.0% |
| !! | ATTAATATGATGTAAGATTT+AGG | - | chr5.1:13471152-13471171 | None:intergenic | 15.0% |
| !! | ATTAATTATTAGTGCAAAAA+AGG | - | chr5.1:13475841-13475860 | None:intergenic | 15.0% |
| !! | CAACAATAATGATTAAATAA+AGG | - | chr5.1:13471196-13471215 | None:intergenic | 15.0% |
| !! | TAAATATGTGAATGTATAAT+TGG | - | chr5.1:13475505-13475524 | None:intergenic | 15.0% |
| !! | TATTAACCCTTAAAAAAAAT+TGG | - | chr5.1:13476319-13476338 | None:intergenic | 15.0% |
| !! | TGATGATAAAATAAATAAAG+CGG | - | chr5.1:13474119-13474138 | None:intergenic | 15.0% |
| !!! | AATCATTATTGTTGTTTTTA+TGG | + | chr5.1:13471202-13471221 | MS.gene67460:intron | 15.0% |
| !!! | ATATAAGATCACTTTTTATA+AGG | + | chr5.1:13472527-13472546 | MS.gene67460:intron | 15.0% |
| !!! | GATTTTAGATAATTATGTTT+TGG | - | chr5.1:13473750-13473769 | None:intergenic | 15.0% |
| !!! | GTTTTTATGGAAAAATTAAT+TGG | + | chr5.1:13471215-13471234 | MS.gene67460:intron | 15.0% |
| !!! | TTTTTATGTATTCTTTATCT+AGG | + | chr5.1:13474584-13474603 | MS.gene67460:intron | 15.0% |
| !!! | TTTTTTTATGCCTAAAAATT+TGG | + | chr5.1:13472118-13472137 | MS.gene67460:intron | 15.0% |
| !! | AAAATAAAAAGCAACATCAA+AGG | + | chr5.1:13472776-13472795 | MS.gene67460:CDS | 20.0% |
| !! | AGCTAGAGTTATTATTATAT+TGG | + | chr5.1:13474951-13474970 | MS.gene67460:intron | 20.0% |
| !! | ATTAGTAGAATTCTATTAAG+AGG | + | chr5.1:13475013-13475032 | MS.gene67460:intron | 20.0% |
| !! | GAAAAATTAATTGGAGATAT+TGG | + | chr5.1:13471224-13471243 | MS.gene67460:intron | 20.0% |
| !! | GAATTTATAGAAATTGTAAC+TGG | + | chr5.1:13475272-13475291 | MS.gene67460:intron | 20.0% |
| !! | GCCCAAATAATAATAATAAT+AGG | - | chr5.1:13471843-13471862 | None:intergenic | 20.0% |
| !! | TAATAGAATTCTACTAATCA+AGG | - | chr5.1:13475011-13475030 | None:intergenic | 20.0% |
| !! | TAGTTTATGATTATTGCATA+GGG | + | chr5.1:13471332-13471351 | MS.gene67460:intron | 20.0% |
| !! | TCATCATATAAATATCATGA+TGG | - | chr5.1:13473191-13473210 | None:intergenic | 20.0% |
| !! | TCTTATGTTCAACAAAATAA+TGG | + | chr5.1:13473157-13473176 | MS.gene67460:intron | 20.0% |
| !! | TGAAATATAACAGTTTCATA+AGG | - | chr5.1:13471940-13471959 | None:intergenic | 20.0% |
| !! | TTAGTTTATGATTATTGCAT+AGG | + | chr5.1:13471331-13471350 | MS.gene67460:intron | 20.0% |
| !! | TTATGTTTCCATATTCATAA+AGG | - | chr5.1:13476196-13476215 | None:intergenic | 20.0% |
| !! | TTATTCAACCTATCATTTAA+GGG | - | chr5.1:13472005-13472024 | None:intergenic | 20.0% |
| !! | TTTATTCAACCTATCATTTA+AGG | - | chr5.1:13472006-13472025 | None:intergenic | 20.0% |
| !!! | AAAAAGCATTTAAAGGTTTT+TGG | - | chr5.1:13472066-13472085 | None:intergenic | 20.0% |
| !!! | AACTGTTATATTTCACATTT+TGG | + | chr5.1:13471945-13471964 | MS.gene67460:intron | 20.0% |
| !!! | AAGATTCTGAAATTTGTTAT+TGG | + | chr5.1:13475295-13475314 | MS.gene67460:intron | 20.0% |
| !!! | AATTCCATAAAGATTTTGAA+TGG | - | chr5.1:13471785-13471804 | None:intergenic | 20.0% |
| !!! | ATATTATAGGATCCAATTTT+GGG | + | chr5.1:13473917-13473936 | MS.gene67460:intron | 20.0% |
| !!! | GATTCTAATTTTCAATTCAT+AGG | + | chr5.1:13474985-13475004 | MS.gene67460:intron | 20.0% |
| !!! | GATTTTGTAGTTTTTAGAAT+AGG | + | chr5.1:13471295-13471314 | MS.gene67460:intron | 20.0% |
| !!! | TATATTATAGGATCCAATTT+TGG | + | chr5.1:13473916-13473935 | MS.gene67460:intron | 20.0% |
| !!! | TCTATATTTTCTATAGAGAA+GGG | + | chr5.1:13475606-13475625 | MS.gene67460:intron | 20.0% |
| !!! | TTCTATATTTTCTATAGAGA+AGG | + | chr5.1:13475605-13475624 | MS.gene67460:intron | 20.0% |
| !!! | TTGAAGAAAAAAGCATTTAA+AGG | - | chr5.1:13472073-13472092 | None:intergenic | 20.0% |
| !!! | TTTGGTATTAAGTATGTTTT+TGG | - | chr5.1:13473732-13473751 | None:intergenic | 20.0% |
| !!! | TTTTTATAAGGCATATCTAT+TGG | + | chr5.1:13472539-13472558 | MS.gene67460:intron | 20.0% |
| ! | AAACATCCATGAAAATTAGT+GGG | - | chr5.1:13473581-13473600 | None:intergenic | 25.0% |
| ! | AACATGAAGAAAAAACATCT+CGG | - | chr5.1:13474918-13474937 | None:intergenic | 25.0% |
| ! | AATAGTTGCCTTTATGAATA+TGG | + | chr5.1:13476185-13476204 | MS.gene67460:intron | 25.0% |
| ! | AATATGGAAACATAATCAGA+AGG | + | chr5.1:13476201-13476220 | MS.gene67460:intron | 25.0% |
| ! | AATTTCAGCAGAAGAATAAT+TGG | + | chr5.1:13475997-13476016 | MS.gene67460:intron | 25.0% |
| ! | AATTTGATGTAGATCATATC+AGG | - | chr5.1:13474304-13474323 | None:intergenic | 25.0% |
| ! | GACTGTATTATTCAAATCAA+AGG | - | chr5.1:13471476-13471495 | None:intergenic | 25.0% |
| ! | GCACTAATAATTAATTCCTT+TGG | + | chr5.1:13475846-13475865 | MS.gene67460:intron | 25.0% |
| ! | TAAACATCCATGAAAATTAG+TGG | - | chr5.1:13473582-13473601 | None:intergenic | 25.0% |
| ! | TAGCATTCTTCTTCTATTAA+TGG | + | chr5.1:13475197-13475216 | MS.gene67460:intron | 25.0% |
| ! | TATCTGTATCTCTTAAATCA+TGG | - | chr5.1:13474511-13474530 | None:intergenic | 25.0% |
| ! | TCAACCATTCAAAATCTTTA+TGG | + | chr5.1:13471778-13471797 | MS.gene67460:intron | 25.0% |
| ! | TGCAATAATTAATAAGTCGA+TGG | + | chr5.1:13471694-13471713 | MS.gene67460:intron | 25.0% |
| !! | ATCTTCTCATAACAACTTTT+AGG | - | chr5.1:13472163-13472182 | None:intergenic | 25.0% |
| !! | TCTTCTCATAACAACTTTTA+GGG | - | chr5.1:13472162-13472181 | None:intergenic | 25.0% |
| !! | TTCCCTTAAAATCTTTAGAA+AGG | - | chr5.1:13472241-13472260 | None:intergenic | 25.0% |
| !!! | AATGGTTTTAAAATCTGAGA+TGG | + | chr5.1:13474035-13474054 | MS.gene67460:intron | 25.0% |
| !!! | AGATTTTAAAACCATTGCAT+GGG | - | chr5.1:13474031-13474050 | None:intergenic | 25.0% |
| !!! | AGTCCTTTCTAAAGATTTTA+AGG | + | chr5.1:13472235-13472254 | MS.gene67460:intron | 25.0% |
| !!! | ATTACTGATCATAATTTGCT+TGG | + | chr5.1:13472284-13472303 | MS.gene67460:intron | 25.0% |
| !!! | GTCCTTTCTAAAGATTTTAA+GGG | + | chr5.1:13472236-13472255 | MS.gene67460:intron | 25.0% |
| !!! | TAAAGATTTTAAGGGAAGTA+AGG | + | chr5.1:13472244-13472263 | MS.gene67460:intron | 25.0% |
| !!! | TGAGTTCTTTTTCATTGTTT+CGG | - | chr5.1:13472592-13472611 | None:intergenic | 25.0% |
| !!! | TTGTTTTATTCAGCAATAGT+TGG | + | chr5.1:13476080-13476099 | MS.gene67460:intron | 25.0% |
| !!! | TTTTAACTTTTGTTGGTTTC+TGG | + | chr5.1:13475645-13475664 | MS.gene67460:intron | 25.0% |
| !!! | TTTTTTCTTGTTACTGATTC+AGG | + | chr5.1:13472682-13472701 | MS.gene67460:intron | 25.0% |
| AAAAAGTGGATACCTCAAAA+AGG | - | chr5.1:13474741-13474760 | None:intergenic | 30.0% | |
| AAAAGTTAAAACAACCACCA+TGG | - | chr5.1:13475636-13475655 | None:intergenic | 30.0% | |
| AAATATAGAATCCCACATTC+AGG | - | chr5.1:13475595-13475614 | None:intergenic | 30.0% | |
| AACTGTGAACCATTAAAAAG+TGG | - | chr5.1:13474755-13474774 | None:intergenic | 30.0% | |
| AAGAAAATGTTGGAGATGAT+AGG | + | chr5.1:13472920-13472939 | MS.gene67460:CDS | 30.0% | |
| AATTGGAGATATTGGAATTC+TGG | + | chr5.1:13471232-13471251 | MS.gene67460:intron | 30.0% | |
| AGAAAATGTTGGAGATGATA+GGG | + | chr5.1:13472921-13472940 | MS.gene67460:CDS | 30.0% | |
| AGCTACTTGCTTTGATTAAT+GGG | + | chr5.1:13475532-13475551 | MS.gene67460:intron | 30.0% | |
| AGGGTTAATATAGTGTTTGA+AGG | + | chr5.1:13476329-13476348 | MS.gene67460:intron | 30.0% | |
| AGTACACTATTTGCACAATA+TGG | - | chr5.1:13472638-13472657 | None:intergenic | 30.0% | |
| ATAGCATAATCTCAATGAGA+AGG | - | chr5.1:13472341-13472360 | None:intergenic | 30.0% | |
| ATCATCCTGATTTCAATTGA+AGG | - | chr5.1:13474432-13474451 | None:intergenic | 30.0% | |
| ATGGAACTTCAATGTCTAAA+GGG | - | chr5.1:13474678-13474697 | None:intergenic | 30.0% | |
| ATTGGAAATTACTAGATGAG+CGG | + | chr5.1:13475313-13475332 | MS.gene67460:intron | 30.0% | |
| CAAATGAGGAGAAGAAATAA+AGG | + | chr5.1:13476563-13476582 | MS.gene67460:CDS | 30.0% | |
| CTCTTTCTGATGTACTTATA+AGG | + | chr5.1:13473092-13473111 | MS.gene67460:CDS | 30.0% | |
| GAAGCATGAAAAGAAAATGT+TGG | + | chr5.1:13472910-13472929 | MS.gene67460:CDS | 30.0% | |
| GATTGAGATAGGGTAAATTT+AGG | + | chr5.1:13471254-13471273 | MS.gene67460:intron | 30.0% | |
| GCATCAGAATTAAGAATCAT+TGG | - | chr5.1:13472198-13472217 | None:intergenic | 30.0% | |
| TACAGTTGGAGTTCTTATAA+TGG | + | chr5.1:13471508-13471527 | MS.gene67460:CDS | 30.0% | |
| TAGCTACTTGCTTTGATTAA+TGG | + | chr5.1:13475531-13475550 | MS.gene67460:intron | 30.0% | |
| TATTCTTTATCTAGGAAGCA+TGG | + | chr5.1:13474592-13474611 | MS.gene67460:intron | 30.0% | |
| TATTTCTTCTCCTCATTTGA+TGG | - | chr5.1:13476562-13476581 | None:intergenic | 30.0% | |
| TCAACTAAATCTTCACTGAA+AGG | - | chr5.1:13473880-13473899 | None:intergenic | 30.0% | |
| TCTTGATTATCATGTTGAGT+AGG | + | chr5.1:13476228-13476247 | MS.gene67460:intron | 30.0% | |
| TGATTAATGGGGTTATAGAT+TGG | + | chr5.1:13475544-13475563 | MS.gene67460:intron | 30.0% | |
| TGGATGTTTATCTAACGATT+TGG | + | chr5.1:13473592-13473611 | MS.gene67460:intron | 30.0% | |
| TGGGAAAGTTACAATCAATT+TGG | - | chr5.1:13474012-13474031 | None:intergenic | 30.0% | |
| TTATTGGGTGAAATCAATGT+AGG | + | chr5.1:13475070-13475089 | MS.gene67460:intron | 30.0% | |
| TTGAATAATACAGTCGAATC+CGG | + | chr5.1:13471481-13471500 | MS.gene67460:intron | 30.0% | |
| TTGTTAAATAGCAGCTATAG+CGG | - | chr5.1:13472481-13472500 | None:intergenic | 30.0% | |
| ! | ATGTTCAAGGCCAAATTTTT+AGG | - | chr5.1:13472131-13472150 | None:intergenic | 30.0% |
| ! | ATTCTTTATCTAGGAAGCAT+GGG | + | chr5.1:13474593-13474612 | MS.gene67460:intron | 30.0% |
| ! | CAAATTTGTTTCTTCATGCT+AGG | + | chr5.1:13474339-13474358 | MS.gene67460:intron | 30.0% |
| ! | CAATGTAGTATGTTTTTCCA+TGG | - | chr5.1:13475954-13475973 | None:intergenic | 30.0% |
| ! | GCTATTTAACAACACTGTTT+TGG | + | chr5.1:13472489-13472508 | MS.gene67460:intron | 30.0% |
| ! | TAGTTTTCCATAGCAACTAA+CGG | - | chr5.1:13475421-13475440 | None:intergenic | 30.0% |
| ! | TCTGTATTGACAATTCTGAA+TGG | + | chr5.1:13471040-13471059 | MS.gene67460:CDS | 30.0% |
| ! | TTGAAATGATGAAGCTTTGA+AGG | - | chr5.1:13474089-13474108 | None:intergenic | 30.0% |
| !! | AACAACACTGTTTTGGATAT+TGG | + | chr5.1:13472496-13472515 | MS.gene67460:intron | 30.0% |
| !! | AATAAGTCGATGGCTTTAAA+AGG | + | chr5.1:13471704-13471723 | MS.gene67460:intron | 30.0% |
| !! | AATGGAAAAGGGTATCATTA+AGG | - | chr5.1:13476473-13476492 | None:intergenic | 30.0% |
| !! | ACATTGATTTCACCCAATAA+AGG | + | chr5.1:13475136-13475155 | MS.gene67460:intron | 30.0% |
| !! | ACTGGATTTGTTTTCTGTTA+GGG | - | chr5.1:13475455-13475474 | None:intergenic | 30.0% |
| !! | ATCCAATTTTGGGTACAATT+TGG | + | chr5.1:13473927-13473946 | MS.gene67460:intron | 30.0% |
| !! | CAATAAGACAACTGATTTGA+TGG | + | chr5.1:13473500-13473519 | MS.gene67460:CDS | 30.0% |
| !! | CACTATTTTCTGGAAAACAA+GGG | + | chr5.1:13471741-13471760 | MS.gene67460:intron | 30.0% |
| !! | GAAACTGTTGCTTTAACATT+TGG | + | chr5.1:13474239-13474258 | MS.gene67460:intron | 30.0% |
| !! | TACTGGATTTGTTTTCTGTT+AGG | - | chr5.1:13475456-13475475 | None:intergenic | 30.0% |
| !!! | CAGATTTTAAAACCATTGCA+TGG | - | chr5.1:13474032-13474051 | None:intergenic | 30.0% |
| !!! | GTGGTTGTTTTAACTTTTGT+TGG | + | chr5.1:13475638-13475657 | MS.gene67460:intron | 30.0% |
| !!! | TAGGGTTTTGTTAATGTTCA+AGG | - | chr5.1:13472144-13472163 | None:intergenic | 30.0% |
| !!! | TTGAGGTATCCACTTTTTAA+TGG | + | chr5.1:13474743-13474762 | MS.gene67460:intron | 30.0% |
| AAAATGGAACCCACATAAAG+TGG | + | chr5.1:13475105-13475124 | MS.gene67460:intron | 35.0% | |
| AAATTCTGCCGAAGTTATAG+TGG | + | chr5.1:13472448-13472467 | MS.gene67460:intron | 35.0% | |
| AATTCTGAATGGATGCGTAA+CGG | + | chr5.1:13471051-13471070 | MS.gene67460:CDS | 35.0% | |
| ACAGGCATCAGTAATAAGAT+TGG | - | chr5.1:13476285-13476304 | None:intergenic | 35.0% | |
| ACGCAAGAATATCAGATACA+CGG | - | chr5.1:13475767-13475786 | None:intergenic | 35.0% | |
| ACTAAATCTTCACTGAAAGG+AGG | - | chr5.1:13473877-13473896 | None:intergenic | 35.0% | |
| ACTATAACTTCGGCAGAATT+TGG | - | chr5.1:13472449-13472468 | None:intergenic | 35.0% | |
| AGACTAACCTCAGATTGATT+TGG | - | chr5.1:13475929-13475948 | None:intergenic | 35.0% | |
| AGTCACATTTCGTTTGATGA+TGG | + | chr5.1:13474840-13474859 | MS.gene67460:intron | 35.0% | |
| ATCCATTCCAAATCAATCTG+AGG | + | chr5.1:13475919-13475938 | MS.gene67460:CDS | 35.0% | |
| ATTGAAGGTCATCTACTGTT+TGG | - | chr5.1:13474417-13474436 | None:intergenic | 35.0% | |
| ATTGTAACTTTCCCATGCAA+TGG | + | chr5.1:13474017-13474036 | MS.gene67460:intron | 35.0% | |
| CAAAGGATTATTGTCTTTGC+TGG | + | chr5.1:13472793-13472812 | MS.gene67460:CDS | 35.0% | |
| CACAGTTCTTAAACATGGAT+GGG | + | chr5.1:13474768-13474787 | MS.gene67460:intron | 35.0% | |
| CAGGAAAAGAGAAAATCTGA+GGG | + | chr5.1:13475245-13475264 | MS.gene67460:intron | 35.0% | |
| CATGGAACTTCAATGTCTAA+AGG | - | chr5.1:13474679-13474698 | None:intergenic | 35.0% | |
| CCAGCAAATCTTTGATAGAA+GGG | - | chr5.1:13475898-13475917 | None:intergenic | 35.0% | |
| CTCTTCCATTGAAACTCTTA+AGG | - | chr5.1:13473358-13473377 | None:intergenic | 35.0% | |
| CTTAAGAGTTTCAATGGAAG+AGG | + | chr5.1:13473356-13473375 | MS.gene67460:CDS | 35.0% | |
| GAAAACAAATCCAGTACAAC+AGG | + | chr5.1:13475460-13475479 | MS.gene67460:intron | 35.0% | |
| GAGTTCATAAAAGTTCAACC+TGG | - | chr5.1:13472565-13472584 | None:intergenic | 35.0% | |
| GATGACCTTCAATTGAAATC+AGG | + | chr5.1:13474424-13474443 | MS.gene67460:intron | 35.0% | |
| GATGCTGTTAATCTCATTTG+CGG | + | chr5.1:13471108-13471127 | MS.gene67460:CDS | 35.0% | |
| GATGTACTTATAAGGTCTGT+GGG | + | chr5.1:13473100-13473119 | MS.gene67460:intron | 35.0% | |
| GCACTATACCACTATAACTT+CGG | - | chr5.1:13472459-13472478 | None:intergenic | 35.0% | |
| GCCTGTTGAAGAAAAGAATT+CGG | - | chr5.1:13471012-13471031 | None:intergenic | 35.0% | |
| GCTACTTGCTTTGATTAATG+GGG | + | chr5.1:13475533-13475552 | MS.gene67460:intron | 35.0% | |
| GGACAAAACACTATTGTTCT+GGG | - | chr5.1:13472428-13472447 | None:intergenic | 35.0% | |
| GTCCAAATTGTACCCAAAAT+TGG | - | chr5.1:13473932-13473951 | None:intergenic | 35.0% | |
| GTCCATGAAATCACCAAATT+GGG | + | chr5.1:13473644-13473663 | MS.gene67460:intron | 35.0% | |
| TCACAGTTCTTAAACATGGA+TGG | + | chr5.1:13474767-13474786 | MS.gene67460:intron | 35.0% | |
| TCACTTATGTGAAATACTCG+TGG | - | chr5.1:13471865-13471884 | None:intergenic | 35.0% | |
| TCAGGAAAAGAGAAAATCTG+AGG | + | chr5.1:13475244-13475263 | MS.gene67460:intron | 35.0% | |
| TCCATGAAATCACCAAATTG+GGG | + | chr5.1:13473645-13473664 | MS.gene67460:intron | 35.0% | |
| TCTAGATGTGTCTCAAAGAA+TGG | - | chr5.1:13474195-13474214 | None:intergenic | 35.0% | |
| TCTTGCCTTAAGAGTTTCAA+TGG | + | chr5.1:13473350-13473369 | MS.gene67460:CDS | 35.0% | |
| TGAAAATTGGTGTACTGTCA+CGG | - | chr5.1:13473218-13473237 | None:intergenic | 35.0% | |
| TGATCACATAAAACACCACA+TGG | - | chr5.1:13474697-13474716 | None:intergenic | 35.0% | |
| TGATGTACTTATAAGGTCTG+TGG | + | chr5.1:13473099-13473118 | MS.gene67460:intron | 35.0% | |
| TGGAATTCTGGATTGAGATA+GGG | + | chr5.1:13471244-13471263 | MS.gene67460:intron | 35.0% | |
| TGGACAAAACACTATTGTTC+TGG | - | chr5.1:13472429-13472448 | None:intergenic | 35.0% | |
| TGGTTCACAGTTCTTAAACA+TGG | + | chr5.1:13474763-13474782 | MS.gene67460:intron | 35.0% | |
| TGTACTCAAAAGCCACTAAA+TGG | - | chr5.1:13476166-13476185 | None:intergenic | 35.0% | |
| TGTATCTGATATTCTTGCGT+CGG | + | chr5.1:13475767-13475786 | MS.gene67460:CDS | 35.0% | |
| TGTCCATGAAATCACCAAAT+TGG | + | chr5.1:13473643-13473662 | MS.gene67460:intron | 35.0% | |
| TTAAGCACAAACACAAACAC+CGG | - | chr5.1:13471423-13471442 | None:intergenic | 35.0% | |
| TTAGACATTGAAGTTCCATG+TGG | + | chr5.1:13474679-13474698 | MS.gene67460:intron | 35.0% | |
| TTGAGAAATGACCTGAATGT+GGG | + | chr5.1:13475581-13475600 | MS.gene67460:intron | 35.0% | |
| TTGATGCTTAATCCCCAATT+TGG | - | chr5.1:13473660-13473679 | None:intergenic | 35.0% | |
| TTGGAATTCTGGATTGAGAT+AGG | + | chr5.1:13471243-13471262 | MS.gene67460:intron | 35.0% | |
| TTTGAGAAATGACCTGAATG+TGG | + | chr5.1:13475580-13475599 | MS.gene67460:intron | 35.0% | |
| ! | AATTGTGTCATTGTTGTGTC+CGG | + | chr5.1:13471401-13471420 | MS.gene67460:intron | 35.0% |
| ! | ACCGAATTCTTTTCTTCAAC+AGG | + | chr5.1:13471008-13471027 | MS.gene67460:intron | 35.0% |
| ! | ACTGATTCAGGACTAGAAAT+AGG | + | chr5.1:13472694-13472713 | MS.gene67460:intron | 35.0% |
| ! | AGAACTCCAACTGTATTTTC+CGG | - | chr5.1:13471503-13471522 | None:intergenic | 35.0% |
| ! | ATTTAGGTTAACCTGAGTCT+TGG | - | chr5.1:13471136-13471155 | None:intergenic | 35.0% |
| ! | CTAGCACTCAGTCTTTTATT+GGG | + | chr5.1:13475055-13475074 | MS.gene67460:intron | 35.0% |
| ! | GCGCTTGATGTAGTTAATTT+TGG | + | chr5.1:13472968-13472987 | MS.gene67460:CDS | 35.0% |
| ! | TCTAGCACTCAGTCTTTTAT+TGG | + | chr5.1:13475054-13475073 | MS.gene67460:intron | 35.0% |
| ! | TTTGAAGTTTGAATGTTGCC+TGG | + | chr5.1:13476140-13476159 | MS.gene67460:intron | 35.0% |
| !! | AACCTCAGATTGATTTGGAA+TGG | - | chr5.1:13475924-13475943 | None:intergenic | 35.0% |
| !! | AACTGGATATGATTTTGGTG+TGG | + | chr5.1:13473302-13473321 | MS.gene67460:CDS | 35.0% |
| !! | AAGACAACTGATTTGATGGT+TGG | + | chr5.1:13473504-13473523 | MS.gene67460:intron | 35.0% |
| !! | AGTACATCAGAAAGAGCATT+TGG | - | chr5.1:13473088-13473107 | None:intergenic | 35.0% |
| !! | ATTAGCTCTACTAAGTCACT+TGG | + | chr5.1:13474138-13474157 | MS.gene67460:intron | 35.0% |
| !! | CCACTATTTTCTGGAAAACA+AGG | + | chr5.1:13471740-13471759 | MS.gene67460:intron | 35.0% |
| !! | TATTTTCTGGAAAACAAGGG+TGG | + | chr5.1:13471744-13471763 | MS.gene67460:intron | 35.0% |
| !!! | CAGGACACACTATTTTTGTT+GGG | - | chr5.1:13473846-13473865 | None:intergenic | 35.0% |
| !!! | CCTTGTTTTCCAGAAAATAG+TGG | - | chr5.1:13471743-13471762 | None:intergenic | 35.0% |
| AACGCTCTCCCTTAAATGAT+AGG | + | chr5.1:13471994-13472013 | MS.gene67460:intron | 40.0% | |
| AAGCGATCTAGGCAAGATAT+TGG | + | chr5.1:13471565-13471584 | MS.gene67460:CDS | 40.0% | |
| ACCCTAGAAATTCGCATGAT+AGG | - | chr5.1:13470982-13471001 | None:intergenic | 40.0% | |
| ACCCTATCATGCGAATTTCT+AGG | + | chr5.1:13470977-13470996 | MS.gene67460:intron | 40.0% | |
| ACCTCTGTACTTATATGTGC+AGG | + | chr5.1:13475346-13475365 | MS.gene67460:intron | 40.0% | |
| ACGAAATGTGACTGTAATCG+AGG | - | chr5.1:13474833-13474852 | None:intergenic | 40.0% | |
| ACTGATAGCAGCACAGAAAA+TGG | - | chr5.1:13476491-13476510 | None:intergenic | 40.0% | |
| AGCAGCACAGAAAATGGAAA+AGG | - | chr5.1:13476485-13476504 | None:intergenic | 40.0% | |
| AGGGTAGATTGAAATCGAGA+GGG | - | chr5.1:13470962-13470981 | None:intergenic | 40.0% | |
| AGTTCTTAAACATGGATGGG+TGG | + | chr5.1:13474771-13474790 | MS.gene67460:intron | 40.0% | |
| AGTTCTTATAATGGCCGGAA+AGG | + | chr5.1:13471517-13471536 | MS.gene67460:CDS | 40.0% | |
| ATAAGGCATATCTATTGGCC+AGG | + | chr5.1:13472544-13472563 | MS.gene67460:intron | 40.0% | |
| ATAATCTCAATGAGAAGGCG+CGG | - | chr5.1:13472336-13472355 | None:intergenic | 40.0% | |
| CAGCAATAGTTGGATTTGTG+TGG | + | chr5.1:13476090-13476109 | MS.gene67460:intron | 40.0% | |
| CCAACAAAAATAGTGTGTCC+TGG | + | chr5.1:13473844-13473863 | MS.gene67460:intron | 40.0% | |
| CCCTAGAAATTCGCATGATA+GGG | - | chr5.1:13470981-13471000 | None:intergenic | 40.0% | |
| CCCTATCATGCGAATTTCTA+GGG | + | chr5.1:13470978-13470997 | MS.gene67460:intron | 40.0% | |
| CCCTTCTATCAAAGATTTGC+TGG | + | chr5.1:13475895-13475914 | MS.gene67460:CDS | 40.0% | |
| CGCAAGAATATCAGATACAC+GGG | - | chr5.1:13475766-13475785 | None:intergenic | 40.0% | |
| CTAGCACTCACTCCTTTATT+GGG | - | chr5.1:13475151-13475170 | None:intergenic | 40.0% | |
| GATTCAGGACTAGAAATAGG+CGG | + | chr5.1:13472697-13472716 | MS.gene67460:intron | 40.0% | |
| GCAGCACAGAAAATGGAAAA+GGG | - | chr5.1:13476484-13476503 | None:intergenic | 40.0% | |
| GCCAGCAAATCTTTGATAGA+AGG | - | chr5.1:13475899-13475918 | None:intergenic | 40.0% | |
| GGATTATTGTCTTTGCTGGA+AGG | + | chr5.1:13472797-13472816 | MS.gene67460:CDS | 40.0% | |
| GTTCTTAAACATGGATGGGT+GGG | + | chr5.1:13474772-13474791 | MS.gene67460:intron | 40.0% | |
| GTTCTTATAATGGCCGGAAA+GGG | + | chr5.1:13471518-13471537 | MS.gene67460:CDS | 40.0% | |
| GTTGGAGTTCTTATAATGGC+CGG | + | chr5.1:13471512-13471531 | MS.gene67460:CDS | 40.0% | |
| TACAGAGTTGACAGTGCATT+AGG | - | chr5.1:13476435-13476454 | None:intergenic | 40.0% | |
| TAGGACCTACACTTCGAAAA+TGG | + | chr5.1:13475089-13475108 | MS.gene67460:intron | 40.0% | |
| TAGGGTAGATTGAAATCGAG+AGG | - | chr5.1:13470963-13470982 | None:intergenic | 40.0% | |
| TATGTCCCACCACTTTATGT+GGG | - | chr5.1:13475117-13475136 | None:intergenic | 40.0% | |
| TCATGAACCGTTAGTTGCTA+TGG | + | chr5.1:13475411-13475430 | MS.gene67460:intron | 40.0% | |
| TCCAAACTTGGATCCTGAAT+TGG | + | chr5.1:13473326-13473345 | MS.gene67460:CDS | 40.0% | |
| TCCTGCACATATAAGTACAG+AGG | - | chr5.1:13475350-13475369 | None:intergenic | 40.0% | |
| TCGAATCCGGAAAATACAGT+TGG | + | chr5.1:13471494-13471513 | MS.gene67460:CDS | 40.0% | |
| TCTAGCACTCACTCCTTTAT+TGG | - | chr5.1:13475152-13475171 | None:intergenic | 40.0% | |
| TGATGACAAGCCATCAAATG+AGG | + | chr5.1:13476549-13476568 | MS.gene67460:CDS | 40.0% | |
| TTAAATCATGGCCAACTGCA+GGG | - | chr5.1:13474499-13474518 | None:intergenic | 40.0% | |
| ! | GAAAATTAGTGGGTCAAGCA+AGG | - | chr5.1:13473571-13473590 | None:intergenic | 40.0% |
| ! | GACAGTACACCAATTTTCAC+TGG | + | chr5.1:13473219-13473238 | MS.gene67460:intron | 40.0% |
| ! | GCGCTAAATCCACTATTTTC+TGG | + | chr5.1:13471731-13471750 | MS.gene67460:intron | 40.0% |
| ! | GCTTGACCCACTAATTTTCA+TGG | + | chr5.1:13473572-13473591 | MS.gene67460:intron | 40.0% |
| ! | GGTGGAACTGGATATGATTT+TGG | + | chr5.1:13473297-13473316 | MS.gene67460:CDS | 40.0% |
| ! | TCCCCAATTTGGTGATTTCA+TGG | - | chr5.1:13473649-13473668 | None:intergenic | 40.0% |
| !! | AAGATATTGGCTTGCATGCA+TGG | + | chr5.1:13471578-13471597 | MS.gene67460:CDS | 40.0% |
| !! | ATCTGAGGTTAGTCTTTCCA+TGG | + | chr5.1:13475934-13475953 | MS.gene67460:intron | 40.0% |
| !! | TTTTGGTGTGGATCCAAACT+TGG | + | chr5.1:13473314-13473333 | MS.gene67460:CDS | 40.0% |
| !!! | CCAGGACACACTATTTTTGT+TGG | - | chr5.1:13473847-13473866 | None:intergenic | 40.0% |
| AAAAGAGGGGAGAGAAGCAA+AGG | - | chr5.1:13476051-13476070 | None:intergenic | 45.0% | |
| AATGTTGCCTGGCCATTTAG+TGG | + | chr5.1:13476151-13476170 | MS.gene67460:intron | 45.0% | |
| ACAAGATGCGACAATGACTG+AGG | + | chr5.1:13473449-13473468 | MS.gene67460:CDS | 45.0% | |
| ACAATCTAGTCACGTCTGAC+TGG | - | chr5.1:13475731-13475750 | None:intergenic | 45.0% | |
| AGCAATGTAGCCTGTTGTAC+TGG | - | chr5.1:13475473-13475492 | None:intergenic | 45.0% | |
| AGGGTCATTTATGTCAACCC+CGG | - | chr5.1:13475879-13475898 | None:intergenic | 45.0% | |
| ATCTTGCCTAGATCGCTTGT+AGG | - | chr5.1:13471563-13471582 | None:intergenic | 45.0% | |
| ATGGAACCCACATAAAGTGG+TGG | + | chr5.1:13475108-13475127 | MS.gene67460:intron | 45.0% | |
| CAAAACACGAACACCCTTTC+CGG | - | chr5.1:13471534-13471553 | None:intergenic | 45.0% | |
| CAAGATGCGACAATGACTGA+GGG | + | chr5.1:13473450-13473469 | MS.gene67460:CDS | 45.0% | |
| CAATGGAAGAGGAAAGAGCT+AGG | + | chr5.1:13473367-13473386 | MS.gene67460:CDS | 45.0% | |
| CAGCTGGAACATGAACGATA+TGG | - | chr5.1:13473063-13473082 | None:intergenic | 45.0% | |
| CATATCGTTCATGTTCCAGC+TGG | + | chr5.1:13473061-13473080 | MS.gene67460:CDS | 45.0% | |
| CTACTAAGTCACTTGGCAGT+TGG | + | chr5.1:13474145-13474164 | MS.gene67460:intron | 45.0% | |
| CTATAGAGAAGGGAAAGCCA+TGG | + | chr5.1:13475616-13475635 | MS.gene67460:intron | 45.0% | |
| CTTAAATCATGGCCAACTGC+AGG | - | chr5.1:13474500-13474519 | None:intergenic | 45.0% | |
| CTTAAGGCAAGAGCCAATTC+AGG | - | chr5.1:13473342-13473361 | None:intergenic | 45.0% | |
| GAGAAAGAGGCAATGATGAC+AGG | - | chr5.1:13474280-13474299 | None:intergenic | 45.0% | |
| GATCATATCAGGCGAGAAAG+AGG | - | chr5.1:13474293-13474312 | None:intergenic | 45.0% | |
| GATGCTGCCAAACAAGAGAA+AGG | + | chr5.1:13473420-13473439 | MS.gene67460:CDS | 45.0% | |
| GCAACAGTTTCTAAGCTGAC+TGG | - | chr5.1:13474230-13474249 | None:intergenic | 45.0% | |
| GCCAATTCAGGATCCAAGTT+TGG | - | chr5.1:13473330-13473349 | None:intergenic | 45.0% | |
| GCTTGAGCTTGAAATCGAGA+AGG | - | chr5.1:13471087-13471106 | None:intergenic | 45.0% | |
| GGGTAGATTGAAATCGAGAG+GGG | - | chr5.1:13470961-13470980 | None:intergenic | 45.0% | |
| GGTAGATTGAAATCGAGAGG+GGG | - | chr5.1:13470960-13470979 | None:intergenic | 45.0% | |
| GTATGTCCCACCACTTTATG+TGG | - | chr5.1:13475118-13475137 | None:intergenic | 45.0% | |
| GTCAGACGTGACTAGATTGT+TGG | + | chr5.1:13475731-13475750 | MS.gene67460:CDS | 45.0% | |
| TAATTCCTTTGGCAGCTTCC+CGG | + | chr5.1:13475857-13475876 | MS.gene67460:intron | 45.0% | |
| TACTATCCGCTACTGACAAC+TGG | - | chr5.1:13475692-13475711 | None:intergenic | 45.0% | |
| TCAAAAGCCACTAAATGGCC+AGG | - | chr5.1:13476161-13476180 | None:intergenic | 45.0% | |
| TGAAGCAAAGACTGAGAAGC+TGG | + | chr5.1:13473000-13473019 | MS.gene67460:CDS | 45.0% | |
| TGAGCCTCCTTTCTCTTGTT+TGG | - | chr5.1:13473430-13473449 | None:intergenic | 45.0% | |
| TGGAACCCACATAAAGTGGT+GGG | + | chr5.1:13475109-13475128 | MS.gene67460:intron | 45.0% | |
| TGGTATTCAGGTGGCACAAT+TGG | + | chr5.1:13472738-13472757 | MS.gene67460:CDS | 45.0% | |
| ! | ACACCAATTTTCACTGGCGA+TGG | + | chr5.1:13473225-13473244 | MS.gene67460:CDS | 45.0% |
| ! | ACCAATTTTCACTGGCGATG+GGG | + | chr5.1:13473227-13473246 | MS.gene67460:CDS | 45.0% |
| ! | ATCGAGGCACTTCTCATTGA+TGG | - | chr5.1:13474817-13474836 | None:intergenic | 45.0% |
| ! | CACAACACAGCTCCTTTTTG+AGG | + | chr5.1:13474726-13474745 | MS.gene67460:intron | 45.0% |
| ! | CACCAATTTTCACTGGCGAT+GGG | + | chr5.1:13473226-13473245 | MS.gene67460:CDS | 45.0% |
| ! | GAAAACAAGGGTGGCATTGA+TGG | + | chr5.1:13471753-13471772 | MS.gene67460:intron | 45.0% |
| ! | GGGTTCCATTTTCGAAGTGT+AGG | - | chr5.1:13475097-13475116 | None:intergenic | 45.0% |
| !! | TGCTTCAGAAGTTGATGCAC+TGG | - | chr5.1:13473478-13473497 | None:intergenic | 45.0% |
| !! | TGTCAGTAGCGGATAGTACA+GGG | + | chr5.1:13475694-13475713 | MS.gene67460:CDS | 45.0% |
| !! | TTGTCAGTAGCGGATAGTAC+AGG | + | chr5.1:13475693-13475712 | MS.gene67460:CDS | 45.0% |
| !! | TATGAAAATAATAATTAAAA+AGG | - | chr5.1:13473975-13473994 | None:intergenic | 5.0% |
| !!! | TTTGAAATAATATATATTAT+AGG | + | chr5.1:13473904-13473923 | MS.gene67460:intron | 5.0% |
| AATTCCTTTGGCAGCTTCCC+GGG | + | chr5.1:13475858-13475877 | MS.gene67460:intron | 50.0% | |
| AGCTCTCCAGTTGTCAGTAG+CGG | + | chr5.1:13475683-13475702 | MS.gene67460:intron | 50.0% | |
| CTGAAAGGAGGTGATCTACC+AGG | - | chr5.1:13473865-13473884 | None:intergenic | 50.0% | |
| GAACCTAGCTGCTGGTATTC+AGG | + | chr5.1:13472726-13472745 | MS.gene67460:CDS | 50.0% | |
| GCAAGCGCTTGCAATGTCAA+TGG | + | chr5.1:13474469-13474488 | MS.gene67460:CDS | 50.0% | |
| GCAGGAAGCTGCAGCAAAAA+AGG | + | chr5.1:13473389-13473408 | MS.gene67460:CDS | 50.0% | |
| GCTGCCAAACAAGAGAAAGG+AGG | + | chr5.1:13473423-13473442 | MS.gene67460:CDS | 50.0% | |
| GGGTCATTTATGTCAACCCC+GGG | - | chr5.1:13475878-13475897 | None:intergenic | 50.0% | |
| TAGAGAAGGGAAAGCCATGG+TGG | + | chr5.1:13475619-13475638 | MS.gene67460:intron | 50.0% | |
| TCAATGGATGACCCTGCAGT+TGG | + | chr5.1:13474485-13474504 | MS.gene67460:CDS | 50.0% | |
| TCCCCATCGCCAGTGAAAAT+TGG | - | chr5.1:13473231-13473250 | None:intergenic | 50.0% | |
| TTGTTTGGCAGCATCCTCTG+CGG | - | chr5.1:13473415-13473434 | None:intergenic | 50.0% | |
| ! | ATTTTCACTGGCGATGGGGA+AGG | + | chr5.1:13473231-13473250 | MS.gene67460:CDS | 50.0% |
| !! | GAAAGAGCATTTGGACCAGC+TGG | - | chr5.1:13473079-13473098 | None:intergenic | 50.0% |
| !! | GTCAGTAGCGGATAGTACAG+GGG | + | chr5.1:13475695-13475714 | MS.gene67460:CDS | 50.0% |
| !!! | CGGAAAGGGTGTTCGTGTTT+TGG | + | chr5.1:13471532-13471551 | MS.gene67460:CDS | 50.0% |
| AGCGGATAGTACAGGGGATC+AGG | + | chr5.1:13475701-13475720 | MS.gene67460:CDS | 55.0% | |
| ATCTCACCTAGTGCCAGCTC+AGG | - | chr5.1:13474557-13474576 | None:intergenic | 55.0% | |
| ATCTGCAGATGACCCTGAGC+TGG | + | chr5.1:13474541-13474560 | MS.gene67460:CDS | 55.0% | |
| ATTCCTTTGGCAGCTTCCCG+GGG | + | chr5.1:13475859-13475878 | MS.gene67460:intron | 55.0% | |
| CCACCTGAATACCAGCAGCT+AGG | - | chr5.1:13472732-13472751 | None:intergenic | 55.0% | |
| CCTAGCTGCTGGTATTCAGG+TGG | + | chr5.1:13472729-13472748 | MS.gene67460:CDS | 55.0% | |
| GGAAGAGGAAAGAGCTAGGC+AGG | + | chr5.1:13473371-13473390 | MS.gene67460:CDS | 55.0% | |
| GGTGAGATGAACCTAGCTGC+TGG | + | chr5.1:13472718-13472737 | MS.gene67460:CDS | 55.0% | |
| GTCACGCCTACAAGCGATCT+AGG | + | chr5.1:13471554-13471573 | MS.gene67460:CDS | 55.0% | |
| TCTCACCTAGTGCCAGCTCA+GGG | - | chr5.1:13474556-13474575 | None:intergenic | 55.0% | |
| TGCAGCAAAAAAGGCCGCAG+AGG | + | chr5.1:13473398-13473417 | MS.gene67460:CDS | 55.0% | |
| ! | CATTTGCGGTGCCAAGACTC+AGG | + | chr5.1:13471122-13471141 | MS.gene67460:CDS | 55.0% |
| ! | TGCAAGCGCTTGCTGCAGTA+GGG | - | chr5.1:13474462-13474481 | None:intergenic | 55.0% |
| ! | TTGCAAGCGCTTGCTGCAGT+AGG | - | chr5.1:13474463-13474482 | None:intergenic | 55.0% |
| GATGACCCTGAGCTGGCACT+AGG | + | chr5.1:13474548-13474567 | MS.gene67460:CDS | 60.0% | |
| TTCACTGGCGATGGGGAAGG+TGG | + | chr5.1:13473234-13473253 | MS.gene67460:CDS | 60.0% | |
| CAACCCCGGGAAGCTGCCAA+AGG | - | chr5.1:13475865-13475884 | None:intergenic | 65.0% | |
| CTGCAGCTGCAGCTGCAGCT+GGG | + | chr5.1:13473274-13473293 | MS.gene67460:CDS | 65.0% | |
| GGCGATGGGGAAGGTGGAAG+CGG | + | chr5.1:13473240-13473259 | MS.gene67460:CDS | 65.0% | |
| TGCAGCTGCAGCTGCAGCAG+CGG | - | chr5.1:13473271-13473290 | None:intergenic | 65.0% | |
| TGCAGCTGCAGCTGCAGCTG+GGG | + | chr5.1:13473275-13473294 | MS.gene67460:CDS | 65.0% | |
| GCAGCTGCAGCTGCAGCTGG+GGG | + | chr5.1:13473276-13473295 | MS.gene67460:CDS | 70.0% | |
| GCTGCAGCTGCAGCTGCAGC+TGG | + | chr5.1:13473273-13473292 | MS.gene67460:CDS | 70.0% | |
| GCTGCAGCTGGGGGTGGAAC+TGG | + | chr5.1:13473285-13473304 | MS.gene67460:CDS | 70.0% | |
| GCTGCAGCTGCAGCTGGGGG+TGG | + | chr5.1:13473279-13473298 | MS.gene67460:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 13470929 | 13476582 | 13470929 | ID=MS.gene67460 |
| chr5.1 | mRNA | 13470929 | 13476582 | 13470929 | ID=MS.gene67460.t1;Parent=MS.gene67460 |
| chr5.1 | exon | 13470929 | 13470940 | 13470929 | ID=MS.gene67460.t1.exon1;Parent=MS.gene67460.t1 |
| chr5.1 | CDS | 13470929 | 13470940 | 13470929 | ID=cds.MS.gene67460.t1;Parent=MS.gene67460.t1 |
| chr5.1 | exon | 13471030 | 13471143 | 13471030 | ID=MS.gene67460.t1.exon2;Parent=MS.gene67460.t1 |
| chr5.1 | CDS | 13471030 | 13471143 | 13471030 | ID=cds.MS.gene67460.t1;Parent=MS.gene67460.t1 |
| chr5.1 | exon | 13471494 | 13471599 | 13471494 | ID=MS.gene67460.t1.exon3;Parent=MS.gene67460.t1 |
| chr5.1 | CDS | 13471494 | 13471599 | 13471494 | ID=cds.MS.gene67460.t1;Parent=MS.gene67460.t1 |
| chr5.1 | exon | 13472704 | 13472818 | 13472704 | ID=MS.gene67460.t1.exon4;Parent=MS.gene67460.t1 |
| chr5.1 | CDS | 13472704 | 13472818 | 13472704 | ID=cds.MS.gene67460.t1;Parent=MS.gene67460.t1 |
| chr5.1 | exon | 13472904 | 13473113 | 13472904 | ID=MS.gene67460.t1.exon5;Parent=MS.gene67460.t1 |
| chr5.1 | CDS | 13472904 | 13473113 | 13472904 | ID=cds.MS.gene67460.t1;Parent=MS.gene67460.t1 |
| chr5.1 | exon | 13473224 | 13473521 | 13473224 | ID=MS.gene67460.t1.exon6;Parent=MS.gene67460.t1 |
| chr5.1 | CDS | 13473224 | 13473521 | 13473224 | ID=cds.MS.gene67460.t1;Parent=MS.gene67460.t1 |
| chr5.1 | exon | 13474446 | 13474569 | 13474446 | ID=MS.gene67460.t1.exon7;Parent=MS.gene67460.t1 |
| chr5.1 | CDS | 13474446 | 13474569 | 13474446 | ID=cds.MS.gene67460.t1;Parent=MS.gene67460.t1 |
| chr5.1 | exon | 13475685 | 13475788 | 13475685 | ID=MS.gene67460.t1.exon8;Parent=MS.gene67460.t1 |
| chr5.1 | CDS | 13475685 | 13475788 | 13475685 | ID=cds.MS.gene67460.t1;Parent=MS.gene67460.t1 |
| chr5.1 | exon | 13475872 | 13475940 | 13475872 | ID=MS.gene67460.t1.exon9;Parent=MS.gene67460.t1 |
| chr5.1 | CDS | 13475872 | 13475940 | 13475872 | ID=cds.MS.gene67460.t1;Parent=MS.gene67460.t1 |
| chr5.1 | exon | 13476538 | 13476582 | 13476538 | ID=MS.gene67460.t1.exon10;Parent=MS.gene67460.t1 |
| chr5.1 | CDS | 13476538 | 13476582 | 13476538 | ID=cds.MS.gene67460.t1;Parent=MS.gene67460.t1 |
| Gene Sequence |
| Protein sequence |
