Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68079.t1 | XP_003612199.1 | 92.2 | 398 | 31 | 0 | 1 | 398 | 1 | 398 | 5.90E-149 | 537.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68079.t1 | O82143 | 73.8 | 404 | 97 | 3 | 1 | 397 | 1 | 402 | 5.6e-92 | 339.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68079.t1 | G7JXI6 | 92.2 | 398 | 31 | 0 | 1 | 398 | 1 | 398 | 4.2e-149 | 537.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68079.t1 | MTR_5g022440 | 99.246 | 398 | 3 | 0 | 1 | 398 | 1 | 398 | 0.0 | 802 |
| MS.gene68079.t1 | MTR_8g075390 | 80.348 | 402 | 60 | 5 | 1 | 396 | 1 | 389 | 0.0 | 569 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68079.t1 | AT4G38630 | 65.174 | 402 | 120 | 7 | 1 | 398 | 1 | 386 | 8.55e-171 | 483 |
Find 101 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGCAGCTGCAGCTGCAGC+TGG | 0.192483 | 5.3:+13095906 | MS.gene68079:CDS |
| CGGAAAGGGTGTTCGTGTTT+TGG | 0.243942 | 5.3:+13094163 | MS.gene68079:CDS |
| GCGCTTGATGTAGTTAATTT+TGG | 0.247694 | 5.3:+13095601 | MS.gene68079:CDS |
| CAAAACACGAACACCCTTTC+CGG | 0.267611 | 5.3:-13094162 | None:intergenic |
| CAATAAGACAACTGATTTGA+TGG | 0.280153 | 5.3:+13096133 | MS.gene68079:CDS |
| TATTTCTTCTCCTCATTTGA+TGG | 0.295179 | 5.3:-13099169 | None:intergenic |
| TGAGCCTCCTTTCTCTTGTT+TGG | 0.297999 | 5.3:-13096060 | None:intergenic |
| CAAAGGATTATTGTCTTTGC+TGG | 0.298005 | 5.3:+13095426 | MS.gene68079:CDS |
| GGTGGAACTGGATATGATTT+TGG | 0.301276 | 5.3:+13095930 | MS.gene68079:CDS |
| CCCTTCTATCAAAGATTTGC+TGG | 0.304569 | 5.3:+13098505 | MS.gene68079:CDS |
| GAACCTAGCTGCTGGTATTC+AGG | 0.311840 | 5.3:+13095359 | MS.gene68079:CDS |
| CTGCAGCTGCAGCTGCAGCT+GGG | 0.313032 | 5.3:+13095907 | MS.gene68079:CDS |
| TCCCCATCGCCAGTGAAAAT+TGG | 0.318823 | 5.3:-13095861 | None:intergenic |
| TAATTCCTTTGGCAGCTTCC+CGG | 0.320953 | 5.3:+13098467 | MS.gene68079:intron |
| CTCTTTCTGATGTACTTATA+AGG | 0.321346 | 5.3:+13095725 | MS.gene68079:CDS |
| CTCTTCCATTGAAACTCTTA+AGG | 0.337538 | 5.3:-13095988 | None:intergenic |
| GCCAATTCAGGATCCAAGTT+TGG | 0.345821 | 5.3:-13095960 | None:intergenic |
| AGACTAACCTCAGATTGATT+TGG | 0.348582 | 5.3:-13098536 | None:intergenic |
| TACAGTTGGAGTTCTTATAA+TGG | 0.358277 | 5.3:+13094139 | MS.gene68079:CDS |
| ACTGATTCAGGACTAGAAAT+AGG | 0.363462 | 5.3:+13095327 | MS.gene68079:intron |
| AATTCCTTTGGCAGCTTCCC+GGG | 0.364317 | 5.3:+13098468 | MS.gene68079:intron |
| TCCAAACTTGGATCCTGAAT+TGG | 0.370635 | 5.3:+13095959 | MS.gene68079:CDS |
| AAGAAAATGTTGGAGATGAT+AGG | 0.372029 | 5.3:+13095553 | MS.gene68079:CDS |
| GCCAGCAAATCTTTGATAGA+AGG | 0.388474 | 5.3:-13098506 | None:intergenic |
| TGCAGCTGCAGCTGCAGCTG+GGG | 0.392381 | 5.3:+13095908 | MS.gene68079:CDS |
| TGGTATTCAGGTGGCACAAT+TGG | 0.403899 | 5.3:+13095371 | MS.gene68079:CDS |
| ATCTCACCTAGTGCCAGCTC+AGG | 0.409983 | 5.3:-13097163 | None:intergenic |
| CTTAAGGCAAGAGCCAATTC+AGG | 0.410841 | 5.3:-13095972 | None:intergenic |
| TACTATCCGCTACTGACAAT+TGG | 0.413345 | 5.3:-13098299 | None:intergenic |
| AGTACATCAGAAAGAGCATT+TGG | 0.417355 | 5.3:-13095718 | None:intergenic |
| AGCGGATAGTACAGGGGATC+AGG | 0.434310 | 5.3:+13098311 | MS.gene68079:CDS |
| CTTAAGAGTTTCAATGGAAG+AGG | 0.440830 | 5.3:+13095989 | MS.gene68079:CDS |
| TTGCAAGCGCTTGCTGCAGT+AGG | 0.440883 | 5.3:-13097069 | None:intergenic |
| TTGAATAATACAGTCGAATC+CGG | 0.440886 | 5.3:+13094112 | MS.gene68079:intron |
| AAGCGATCTAGGCAAGATAT+TGG | 0.447295 | 5.3:+13094196 | MS.gene68079:CDS |
| ATCTTGCCTAGATCGCTTGT+AGG | 0.450253 | 5.3:-13094191 | None:intergenic |
| TGAAGCAAAGACTGAGAAGC+TGG | 0.459635 | 5.3:+13095633 | MS.gene68079:CDS |
| GAAAGAGCATTTGGACCAGC+TGG | 0.461973 | 5.3:-13095709 | None:intergenic |
| GTCAGACGTGACTAGATTGT+TGG | 0.472662 | 5.3:+13098341 | MS.gene68079:CDS |
| AAGATATTGGCTTGCATGCA+TGG | 0.473341 | 5.3:+13094209 | MS.gene68079:CDS |
| GGAAGAGGAAAGAGCTAGGC+AGG | 0.474797 | 5.3:+13096004 | MS.gene68079:CDS |
| GTCACACCTACAAGCGATCT+AGG | 0.475200 | 5.3:+13094185 | MS.gene68079:CDS |
| TGCAGCTGCAGCTGCAGCGG+CGG | 0.475457 | 5.3:-13095901 | None:intergenic |
| CAGCTGGAACATGAACGATA+TGG | 0.476638 | 5.3:-13095693 | None:intergenic |
| ATTTAGGTTAACCTGAGTCT+TGG | 0.480341 | 5.3:-13093764 | None:intergenic |
| GCAGCTGCAGCTGCAGCTGG+GGG | 0.483504 | 5.3:+13095909 | MS.gene68079:CDS |
| ACAATCTAGTCACGTCTGAC+TGG | 0.487951 | 5.3:-13098338 | None:intergenic |
| GGCGATGGGGAAGGTGGAAG+CGG | 0.487998 | 5.3:+13095873 | MS.gene68079:CDS |
| TTGTCAGTAGCGGATAGTAC+AGG | 0.488303 | 5.3:+13098303 | MS.gene68079:CDS |
| CTTACATCATGGCCAACTGC+AGG | 0.490619 | 5.3:-13097106 | None:intergenic |
| AACCTCAGATTGATTTGGAA+TGG | 0.493549 | 5.3:-13098531 | None:intergenic |
| AGCTGCAGCTGCAGCTGCAG+CGG | 0.494105 | 5.3:-13095904 | None:intergenic |
| TGCAAGCGCTTGCTGCAGTA+GGG | 0.495910 | 5.3:-13097068 | None:intergenic |
| TGCTTCAGAAGTTGATGCAC+TGG | 0.500973 | 5.3:-13096108 | None:intergenic |
| AGAAAATGTTGGAGATGATA+GGG | 0.513265 | 5.3:+13095554 | MS.gene68079:CDS |
| TCTTGCCTTAAGAGTTTCAA+TGG | 0.516561 | 5.3:+13095983 | MS.gene68079:CDS |
| GTTGGAGTTCTTATAATGGC+CGG | 0.522830 | 5.3:+13094143 | MS.gene68079:CDS |
| GTTCTTATAATGGCCGGAAA+GGG | 0.529679 | 5.3:+13094149 | MS.gene68079:CDS |
| GATGCTGTTAATCTCATTTG+CGG | 0.530412 | 5.3:+13093739 | MS.gene68079:CDS |
| GGATTATTGTCTTTGCTGGA+AGG | 0.537771 | 5.3:+13095430 | MS.gene68079:CDS |
| GAAGCATGAAAAGAAAATGT+TGG | 0.539117 | 5.3:+13095543 | MS.gene68079:CDS |
| ATCTGCAGATGACCCTGAGC+TGG | 0.542125 | 5.3:+13097150 | MS.gene68079:CDS |
| AGTTCTTATAATGGCCGGAA+AGG | 0.543234 | 5.3:+13094148 | MS.gene68079:CDS |
| CATTTGCGGTGCCAAGACTC+AGG | 0.548520 | 5.3:+13093753 | MS.gene68079:CDS |
| ATCTTCAACCATGGTGCTCG+AGG | 0.555601 | 5.3:+13093550 | None:intergenic |
| CCAGCAAATCTTTGATAGAA+GGG | 0.562714 | 5.3:-13098505 | None:intergenic |
| TGATGACAAGCCATCAAATG+AGG | 0.567204 | 5.3:+13099159 | MS.gene68079:CDS |
| TATCTGTATCTCTTACATCA+TGG | 0.567461 | 5.3:-13097117 | None:intergenic |
| TTCACTGGCGATGGGGAAGG+TGG | 0.567749 | 5.3:+13095867 | MS.gene68079:CDS |
| CATATCGTTCATGTTCCAGC+TGG | 0.573598 | 5.3:+13095694 | MS.gene68079:CDS |
| TCTGTATTGACAATTCTGAA+TGG | 0.573905 | 5.3:+13093671 | MS.gene68079:CDS |
| CAATGGAAGAGGAAAGAGCT+AGG | 0.574068 | 5.3:+13096000 | MS.gene68079:CDS |
| GCAAGCGCTTGCAATGTCAA+TGG | 0.578213 | 5.3:+13097078 | MS.gene68079:CDS |
| TGTCAGTAGCGGATAGTACA+GGG | 0.579867 | 5.3:+13098304 | MS.gene68079:CDS |
| ATTCCTTTGGCAGCTTCCCG+GGG | 0.587464 | 5.3:+13098469 | MS.gene68079:intron |
| GATGCTGCCAAACAAGAGAA+AGG | 0.587529 | 5.3:+13096053 | MS.gene68079:CDS |
| CGCAAGAATATCAGATACAC+GGG | 0.590827 | 5.3:-13098373 | None:intergenic |
| CCACCTGAATACCAGCAGCT+AGG | 0.595708 | 5.3:-13095362 | None:intergenic |
| GGTGAGATGAACCTAGCTGC+TGG | 0.597381 | 5.3:+13095351 | MS.gene68079:CDS |
| GAAAGGAGGCTCACAAGATG+CGG | 0.600328 | 5.3:+13096070 | MS.gene68079:CDS |
| ACAAGATGCGGCAATGACTG+AGG | 0.600908 | 5.3:+13096082 | MS.gene68079:CDS |
| GGGTCATTTATGTCAACCCC+GGG | 0.601962 | 5.3:-13098485 | None:intergenic |
| TCGAATCCGGAAAATACAGT+TGG | 0.607578 | 5.3:+13094125 | MS.gene68079:CDS |
| GATGACCCTGAGCTGGCACT+AGG | 0.611948 | 5.3:+13097157 | MS.gene68079:CDS |
| AGGGTCATTTATGTCAACCC+CGG | 0.615942 | 5.3:-13098486 | None:intergenic |
| TGTATCTGATATTCTTGCGT+CGG | 0.618378 | 5.3:+13098377 | MS.gene68079:CDS |
| CAAGATGCGGCAATGACTGA+GGG | 0.618753 | 5.3:+13096083 | MS.gene68079:CDS |
| AATTCTGAATGGATGCGTAA+CGG | 0.621250 | 5.3:+13093682 | MS.gene68079:CDS |
| TTACATCATGGCCAACTGCA+GGG | 0.622742 | 5.3:-13097105 | None:intergenic |
| AGCTCTCCAATTGTCAGTAG+CGG | 0.629461 | 5.3:+13098293 | MS.gene68079:intron |
| TCAATGGATGACCCTGCAGT+TGG | 0.633492 | 5.3:+13097094 | MS.gene68079:CDS |
| ATCCATTCCAAATCAATCTG+AGG | 0.635456 | 5.3:+13098529 | MS.gene68079:CDS |
| ACGCAAGAATATCAGATACA+CGG | 0.643826 | 5.3:-13098374 | None:intergenic |
| TCTCACCTAGTGCCAGCTCA+GGG | 0.643932 | 5.3:-13097162 | None:intergenic |
| GCTTGAGCTTGAAATCGAGA+AGG | 0.649113 | 5.3:-13093715 | None:intergenic |
| CCTAGCTGCTGGTATTCAGG+TGG | 0.660293 | 5.3:+13095362 | MS.gene68079:CDS |
| ATAAATTACCTCGAGCACCA+TGG | 0.693882 | 5.3:-13093558 | None:intergenic |
| GCTGCCAAACAAGAGAAAGG+AGG | 0.696072 | 5.3:+13096056 | MS.gene68079:CDS |
| GATTCAGGACTAGAAATAGG+CGG | 0.712728 | 5.3:+13095330 | MS.gene68079:intron |
| GTCAGTAGCGGATAGTACAG+GGG | 0.716711 | 5.3:+13098305 | MS.gene68079:CDS |
| TTGTTTGGCAGCATCCTCTG+CGG | 0.738209 | 5.3:-13096045 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTAACAAGATTAAT+AGG | + | chr5.3:13094724-13094743 | MS.gene68079:intron | 10.0% |
| !! | AACAATAATGATTAAATAAA+GGG | - | chr5.3:13093826-13093845 | None:intergenic | 10.0% |
| !!! | TCCTATTTTTATTATTATTT+GGG | + | chr5.3:13094470-13094489 | MS.gene68079:intron | 10.0% |
| !!! | TTATTTCCAATTTTTTTTAA+GGG | + | chr5.3:13098920-13098939 | MS.gene68079:intron | 10.0% |
| !!! | TTCCTATTTTTATTATTATT+TGG | + | chr5.3:13094469-13094488 | MS.gene68079:intron | 10.0% |
| !!! | TTTATTTCCAATTTTTTTTA+AGG | + | chr5.3:13098919-13098938 | MS.gene68079:intron | 10.0% |
| !! | AAACAAATATCATTTAAAAG+AGG | - | chr5.3:13098676-13098695 | None:intergenic | 15.0% |
| !! | AAATTGGAAATAAATATAAC+AGG | - | chr5.3:13098913-13098932 | None:intergenic | 15.0% |
| !! | AACAAATATCATTTAAAAGA+GGG | - | chr5.3:13098675-13098694 | None:intergenic | 15.0% |
| !! | ATTAATATGATGTAAGATTT+AGG | - | chr5.3:13093783-13093802 | None:intergenic | 15.0% |
| !! | ATTAATTATTAGTGCAAAAA+AGG | - | chr5.3:13098451-13098470 | None:intergenic | 15.0% |
| !! | CAACAATAATGATTAAATAA+AGG | - | chr5.3:13093827-13093846 | None:intergenic | 15.0% |
| !! | TAAATATGTGAATGTATAAT+TGG | - | chr5.3:13098115-13098134 | None:intergenic | 15.0% |
| !! | TATTAACCCTTAAAAAAAAT+TGG | - | chr5.3:13098929-13098948 | None:intergenic | 15.0% |
| !! | TGATGATAAAATAAATAAAG+CGG | - | chr5.3:13096752-13096771 | None:intergenic | 15.0% |
| !!! | AATCATTATTGTTGTTTTTA+TGG | + | chr5.3:13093833-13093852 | MS.gene68079:intron | 15.0% |
| !!! | ATATAAGATCACTTTTTATA+AGG | + | chr5.3:13095160-13095179 | MS.gene68079:intron | 15.0% |
| !!! | GATTTTAGATAATTATGTTT+TGG | - | chr5.3:13096383-13096402 | None:intergenic | 15.0% |
| !!! | TTTTTATGTATTCTTTATCT+AGG | + | chr5.3:13097193-13097212 | MS.gene68079:intron | 15.0% |
| !! | AAAATAAAAAGCAACATCAA+AGG | + | chr5.3:13095409-13095428 | MS.gene68079:CDS | 20.0% |
| !! | ACAAATATCATTTAAAAGAG+GGG | - | chr5.3:13098674-13098693 | None:intergenic | 20.0% |
| !! | AGCTAGAGTTATTATTATAT+TGG | + | chr5.3:13097561-13097580 | MS.gene68079:intron | 20.0% |
| !! | ATTAGTAGAATTCTATTAAG+AGG | + | chr5.3:13097623-13097642 | MS.gene68079:intron | 20.0% |
| !! | GAATTTATAGAAATTGTAAC+TGG | + | chr5.3:13097882-13097901 | MS.gene68079:intron | 20.0% |
| !! | GCCCAAATAATAATAAAAAT+AGG | - | chr5.3:13094474-13094493 | None:intergenic | 20.0% |
| !! | TAATAGAATTCTACTAATCA+AGG | - | chr5.3:13097621-13097640 | None:intergenic | 20.0% |
| !! | TAGTTTATGATAATTGCATA+GGG | + | chr5.3:13093963-13093982 | MS.gene68079:intron | 20.0% |
| !! | TCTTATGTTCAACAAAATAA+TGG | + | chr5.3:13095790-13095809 | MS.gene68079:intron | 20.0% |
| !! | TGAAATATAACAGTTTCATA+AGG | - | chr5.3:13094573-13094592 | None:intergenic | 20.0% |
| !! | TTAGTTTATGATAATTGCAT+AGG | + | chr5.3:13093962-13093981 | MS.gene68079:intron | 20.0% |
| !! | TTATGTTTCCATATTCATAA+AGG | - | chr5.3:13098806-13098825 | None:intergenic | 20.0% |
| !! | TTATTCAACCTATCATTTAA+GGG | - | chr5.3:13094638-13094657 | None:intergenic | 20.0% |
| !! | TTTATTCAACCTATCATTTA+AGG | - | chr5.3:13094639-13094658 | None:intergenic | 20.0% |
| !!! | AAAAAGCATTTAAAGGTTTT+TGG | - | chr5.3:13094699-13094718 | None:intergenic | 20.0% |
| !!! | AACTGTTATATTTCACATTT+TGG | + | chr5.3:13094578-13094597 | MS.gene68079:intron | 20.0% |
| !!! | AATGGTTTTAAAATCTTAGA+TGG | + | chr5.3:13096668-13096687 | MS.gene68079:intron | 20.0% |
| !!! | AATTCCATAAAGATTTTGAA+TGG | - | chr5.3:13094416-13094435 | None:intergenic | 20.0% |
| !!! | ATATTATAGGATCCAATTTT+GGG | + | chr5.3:13096550-13096569 | MS.gene68079:intron | 20.0% |
| !!! | GATTCTAATTTTCAATTCAT+AGG | + | chr5.3:13097595-13097614 | MS.gene68079:intron | 20.0% |
| !!! | GATTTTGTAGTTTTTAGAAT+AGG | + | chr5.3:13093926-13093945 | MS.gene68079:intron | 20.0% |
| !!! | TAAAGATTTTAAAGGAAGTA+GGG | + | chr5.3:13094877-13094896 | MS.gene68079:intron | 20.0% |
| !!! | TATATTATAGGATCCAATTT+TGG | + | chr5.3:13096549-13096568 | MS.gene68079:intron | 20.0% |
| !!! | TCTATATTTTCTATAGAGAA+GGG | + | chr5.3:13098216-13098235 | MS.gene68079:intron | 20.0% |
| !!! | TTCCTTTAAAATCTTTAGAA+AGG | - | chr5.3:13094874-13094893 | None:intergenic | 20.0% |
| !!! | TTCTATATTTTCTATAGAGA+AGG | + | chr5.3:13098215-13098234 | MS.gene68079:intron | 20.0% |
| !!! | TTGAAGAAAAAAGCATTTAA+AGG | - | chr5.3:13094706-13094725 | None:intergenic | 20.0% |
| !!! | TTTGGTATTAAGTATGTTTT+TGG | - | chr5.3:13096365-13096384 | None:intergenic | 20.0% |
| !!! | TTTTTATAAGGCATATCTAT+TGG | + | chr5.3:13095172-13095191 | MS.gene68079:intron | 20.0% |
| !!! | TTTTTTTATGCCTAAAAATG+TGG | + | chr5.3:13094751-13094770 | MS.gene68079:intron | 20.0% |
| ! | AAACATCCATGAAAATTAGT+GGG | - | chr5.3:13096214-13096233 | None:intergenic | 25.0% |
| ! | AATAGTTGCCTTTATGAATA+TGG | + | chr5.3:13098795-13098814 | MS.gene68079:intron | 25.0% |
| ! | AATATGGAAACATAATCAGA+AGG | + | chr5.3:13098811-13098830 | MS.gene68079:intron | 25.0% |
| ! | AATTCGAGATATTGAAATTC+TGG | + | chr5.3:13093863-13093882 | MS.gene68079:intron | 25.0% |
| ! | AATTTCAGCAGAAGAATAAT+TGG | + | chr5.3:13098607-13098626 | MS.gene68079:intron | 25.0% |
| ! | AATTTGATGTAGATCATATC+AGG | - | chr5.3:13096913-13096932 | None:intergenic | 25.0% |
| ! | ACATGAAGAAAAAAACATCT+CGG | - | chr5.3:13097527-13097546 | None:intergenic | 25.0% |
| ! | ATTGTAAATTACTAGATGAG+CGG | + | chr5.3:13097923-13097942 | MS.gene68079:intron | 25.0% |
| ! | GACTGTATTATTCAAATCAA+AGG | - | chr5.3:13094107-13094126 | None:intergenic | 25.0% |
| ! | GCACTAATAATTAATTCCTT+TGG | + | chr5.3:13098456-13098475 | MS.gene68079:intron | 25.0% |
| ! | TAAACATCCATGAAAATTAG+TGG | - | chr5.3:13096215-13096234 | None:intergenic | 25.0% |
| ! | TAGCATTCTTCTTCTATTAA+TGG | + | chr5.3:13097807-13097826 | MS.gene68079:intron | 25.0% |
| ! | TCAACCATTCAAAATCTTTA+TGG | + | chr5.3:13094409-13094428 | MS.gene68079:intron | 25.0% |
| ! | TCATCATATAAATACCATGA+TGG | - | chr5.3:13095824-13095843 | None:intergenic | 25.0% |
| ! | TGCAATAATTAATAAGTCGA+TGG | + | chr5.3:13094325-13094344 | MS.gene68079:intron | 25.0% |
| !! | ATCTTCTCATAACAACTTTT+AGG | - | chr5.3:13094796-13094815 | None:intergenic | 25.0% |
| !! | GAAACTTTTGCTTTAACATT+TGG | + | chr5.3:13096848-13096867 | MS.gene68079:intron | 25.0% |
| !! | TCTTCTCATAACAACTTTTA+GGG | - | chr5.3:13094795-13094814 | None:intergenic | 25.0% |
| !!! | AAGATTTTAAAACCATTGCA+TGG | - | chr5.3:13096665-13096684 | None:intergenic | 25.0% |
| !!! | AGATTTTAAAACCATTGCAT+GGG | - | chr5.3:13096664-13096683 | None:intergenic | 25.0% |
| !!! | ATTACTGATCATAATTTGCT+TGG | + | chr5.3:13094917-13094936 | MS.gene68079:intron | 25.0% |
| !!! | CTAAAGATTTTAAAGGAAGT+AGG | + | chr5.3:13094876-13094895 | MS.gene68079:intron | 25.0% |
| !!! | GTCCTTTCTAAAGATTTTAA+AGG | + | chr5.3:13094869-13094888 | MS.gene68079:intron | 25.0% |
| !!! | TAGGGTTTTGTTAATGTTTA+AGG | - | chr5.3:13094777-13094796 | None:intergenic | 25.0% |
| !!! | TGAGTTCTTTTTCATTGTTT+CGG | - | chr5.3:13095225-13095244 | None:intergenic | 25.0% |
| !!! | TTGTTTTATTCAGCAATAGT+TGG | + | chr5.3:13098690-13098709 | MS.gene68079:intron | 25.0% |
| !!! | TTTTAACTTTTGTTGGTTTC+TGG | + | chr5.3:13098255-13098274 | MS.gene68079:intron | 25.0% |
| !!! | TTTTTTCTTGTTACTGATTC+AGG | + | chr5.3:13095315-13095334 | MS.gene68079:intron | 25.0% |
| AAAAAGTGGATACCTCAAAA+AGG | - | chr5.3:13097350-13097369 | None:intergenic | 30.0% | |
| AAAAGTTAAAACAACCACCA+TGG | - | chr5.3:13098246-13098265 | None:intergenic | 30.0% | |
| AAATATAGAATCCCACATTC+AGG | - | chr5.3:13098205-13098224 | None:intergenic | 30.0% | |
| AACTGTGAACCATTAAAAAG+TGG | - | chr5.3:13097364-13097383 | None:intergenic | 30.0% | |
| AAGAAAATGTTGGAGATGAT+AGG | + | chr5.3:13095553-13095572 | MS.gene68079:CDS | 30.0% | |
| AGAAAATGTTGGAGATGATA+GGG | + | chr5.3:13095554-13095573 | MS.gene68079:CDS | 30.0% | |
| AGCTACTTGCTTTGATTAAT+GGG | + | chr5.3:13098142-13098161 | MS.gene68079:intron | 30.0% | |
| AGGGTTAATATAGTGTTTGA+AGG | + | chr5.3:13098939-13098958 | MS.gene68079:intron | 30.0% | |
| AGTACACTATTTGCACAATA+TGG | - | chr5.3:13095271-13095290 | None:intergenic | 30.0% | |
| ATAGCATAATCTCAATGAGA+AGG | - | chr5.3:13094974-13094993 | None:intergenic | 30.0% | |
| ATCATCCTGATTTCAATTGA+AGG | - | chr5.3:13097041-13097060 | None:intergenic | 30.0% | |
| ATGGAACTTCAATGTCTAAA+GGG | - | chr5.3:13097287-13097306 | None:intergenic | 30.0% | |
| CTATTAATGGTGAGAAAGTA+GGG | + | chr5.3:13097820-13097839 | MS.gene68079:intron | 30.0% | |
| CTCTTTCTGATGTACTTATA+AGG | + | chr5.3:13095725-13095744 | MS.gene68079:CDS | 30.0% | |
| GAAGCATGAAAAGAAAATGT+TGG | + | chr5.3:13095543-13095562 | MS.gene68079:CDS | 30.0% | |
| GATTGAGATAGGGTAAATTT+AGG | + | chr5.3:13093885-13093904 | MS.gene68079:intron | 30.0% | |
| GCATCAGAATTAAGAATCAT+TGG | - | chr5.3:13094831-13094850 | None:intergenic | 30.0% | |
| TAATGGTTTATCTACCATCA+TGG | + | chr5.3:13095807-13095826 | MS.gene68079:intron | 30.0% | |
| TACAGTTGGAGTTCTTATAA+TGG | + | chr5.3:13094139-13094158 | MS.gene68079:CDS | 30.0% | |
| TAGCTACTTGCTTTGATTAA+TGG | + | chr5.3:13098141-13098160 | MS.gene68079:intron | 30.0% | |
| TATCTGTATCTCTTACATCA+TGG | - | chr5.3:13097120-13097139 | None:intergenic | 30.0% | |
| TATTAATGGTGAGAAAGTAG+GGG | + | chr5.3:13097821-13097840 | MS.gene68079:intron | 30.0% | |
| TATTCTTTATCTAGGAAGCA+TGG | + | chr5.3:13097201-13097220 | MS.gene68079:intron | 30.0% | |
| TATTTCTTCTCCTCATTTGA+TGG | - | chr5.3:13099172-13099191 | None:intergenic | 30.0% | |
| TCAACTAAATCTTCACTGAA+AGG | - | chr5.3:13096513-13096532 | None:intergenic | 30.0% | |
| TCACTTATGTGAAATACTCA+TGG | - | chr5.3:13094496-13094515 | None:intergenic | 30.0% | |
| TCTATTAATGGTGAGAAAGT+AGG | + | chr5.3:13097819-13097838 | MS.gene68079:intron | 30.0% | |
| TCTTGATTATCATGTTGAGT+AGG | + | chr5.3:13098838-13098857 | MS.gene68079:intron | 30.0% | |
| TGAAATTCTGGATTGAGATA+GGG | + | chr5.3:13093875-13093894 | MS.gene68079:intron | 30.0% | |
| TGATTAATGGGGTTATAGAT+TGG | + | chr5.3:13098154-13098173 | MS.gene68079:intron | 30.0% | |
| TGGATGTTTATCTAACGATT+TGG | + | chr5.3:13096225-13096244 | MS.gene68079:intron | 30.0% | |
| TGGGAAAGTTACAATCAATT+TGG | - | chr5.3:13096645-13096664 | None:intergenic | 30.0% | |
| TTAAGCACAAACACAAACAT+CGG | - | chr5.3:13094054-13094073 | None:intergenic | 30.0% | |
| TTATTGGGTGAAATCAATGT+AGG | + | chr5.3:13097680-13097699 | MS.gene68079:intron | 30.0% | |
| TTGAAATTCTGGATTGAGAT+AGG | + | chr5.3:13093874-13093893 | MS.gene68079:intron | 30.0% | |
| TTGAATAATACAGTCGAATC+CGG | + | chr5.3:13094112-13094131 | MS.gene68079:intron | 30.0% | |
| TTGTTAAATAGCAGCTATAG+CGG | - | chr5.3:13095114-13095133 | None:intergenic | 30.0% | |
| ! | ATTCTTTATCTAGGAAGCAT+GGG | + | chr5.3:13097202-13097221 | MS.gene68079:intron | 30.0% |
| ! | CAAATTTGTTTCTTCATGCT+AGG | + | chr5.3:13096948-13096967 | MS.gene68079:intron | 30.0% |
| ! | CAATGTAGTATGTTTTTCCA+TGG | - | chr5.3:13098564-13098583 | None:intergenic | 30.0% |
| ! | CTAGCACTCAATCTTTTATT+GGG | + | chr5.3:13097665-13097684 | MS.gene68079:intron | 30.0% |
| ! | GCTATTTAACAACACTGTTT+TGG | + | chr5.3:13095122-13095141 | MS.gene68079:intron | 30.0% |
| ! | TAGTTTTCCATAGCAACTAA+CGG | - | chr5.3:13098031-13098050 | None:intergenic | 30.0% |
| ! | TCTAGCACTCAATCTTTTAT+TGG | + | chr5.3:13097664-13097683 | MS.gene68079:intron | 30.0% |
| ! | TCTGTATTGACAATTCTGAA+TGG | + | chr5.3:13093671-13093690 | MS.gene68079:CDS | 30.0% |
| ! | TTGAAATGATGAAGCTTTGA+AGG | - | chr5.3:13096722-13096741 | None:intergenic | 30.0% |
| !! | AACAACACTGTTTTGGATAT+TGG | + | chr5.3:13095129-13095148 | MS.gene68079:intron | 30.0% |
| !! | AATAAGTCGATGGCTTTAAA+AGG | + | chr5.3:13094335-13094354 | MS.gene68079:intron | 30.0% |
| !! | AATGGAAAAGGGTATCATTA+AGG | - | chr5.3:13099083-13099102 | None:intergenic | 30.0% |
| !! | ACATTGATTTCACCCAATAA+AGG | + | chr5.3:13097746-13097765 | MS.gene68079:intron | 30.0% |
| !! | ACTGGATTTGTTTTCTGTTA+GGG | - | chr5.3:13098065-13098084 | None:intergenic | 30.0% |
| !! | ATCCAATTTTGGGTACAATT+TGG | + | chr5.3:13096560-13096579 | MS.gene68079:intron | 30.0% |
| !! | ATGTTTAAGGCCACATTTTT+AGG | - | chr5.3:13094764-13094783 | None:intergenic | 30.0% |
| !! | CAATAAGACAACTGATTTGA+TGG | + | chr5.3:13096133-13096152 | MS.gene68079:CDS | 30.0% |
| !! | CACTATTTTCTGGAAAACAA+GGG | + | chr5.3:13094372-13094391 | MS.gene68079:intron | 30.0% |
| !! | TACTGGATTTGTTTTCTGTT+AGG | - | chr5.3:13098066-13098085 | None:intergenic | 30.0% |
| !!! | GTGGTTGTTTTAACTTTTGT+TGG | + | chr5.3:13098248-13098267 | MS.gene68079:intron | 30.0% |
| !!! | TTGAGGTATCCACTTTTTAA+TGG | + | chr5.3:13097352-13097371 | MS.gene68079:intron | 30.0% |
| AAAATGGAACCCACATAAAG+TGG | + | chr5.3:13097715-13097734 | MS.gene68079:intron | 35.0% | |
| AATTCTGAATGGATGCGTAA+CGG | + | chr5.3:13093682-13093701 | MS.gene68079:CDS | 35.0% | |
| ACAGGCATCAGTAATAAGAT+TGG | - | chr5.3:13098895-13098914 | None:intergenic | 35.0% | |
| ACGCAAGAATATCAGATACA+CGG | - | chr5.3:13098377-13098396 | None:intergenic | 35.0% | |
| ACTAAATCTTCACTGAAAGG+AGG | - | chr5.3:13096510-13096529 | None:intergenic | 35.0% | |
| AGACTAACCTCAGATTGATT+TGG | - | chr5.3:13098539-13098558 | None:intergenic | 35.0% | |
| AGTCACATTTCGTTTGATGA+TGG | + | chr5.3:13097449-13097468 | MS.gene68079:intron | 35.0% | |
| AGTTCTTAAACATGGATGGA+TGG | + | chr5.3:13097380-13097399 | MS.gene68079:intron | 35.0% | |
| ATAAGGCATATCTATTGGTC+AGG | + | chr5.3:13095177-13095196 | MS.gene68079:intron | 35.0% | |
| ATCCATTCCAAATCAATCTG+AGG | + | chr5.3:13098529-13098548 | MS.gene68079:CDS | 35.0% | |
| ATTGTAACTTTCCCATGCAA+TGG | + | chr5.3:13096650-13096669 | MS.gene68079:intron | 35.0% | |
| CAAAGGATTATTGTCTTTGC+TGG | + | chr5.3:13095426-13095445 | MS.gene68079:CDS | 35.0% | |
| CATGGAACTTCAATGTCTAA+AGG | - | chr5.3:13097288-13097307 | None:intergenic | 35.0% | |
| CCAGCAAATCTTTGATAGAA+GGG | - | chr5.3:13098508-13098527 | None:intergenic | 35.0% | |
| CTCTTCCATTGAAACTCTTA+AGG | - | chr5.3:13095991-13096010 | None:intergenic | 35.0% | |
| CTTAAGAGTTTCAATGGAAG+AGG | + | chr5.3:13095989-13096008 | MS.gene68079:CDS | 35.0% | |
| GAAAACAAATCCAGTACAAC+AGG | + | chr5.3:13098070-13098089 | MS.gene68079:intron | 35.0% | |
| GATGCTGTTAATCTCATTTG+CGG | + | chr5.3:13093739-13093758 | MS.gene68079:CDS | 35.0% | |
| GATGTACTTATAAGGTCTGT+GGG | + | chr5.3:13095733-13095752 | MS.gene68079:intron | 35.0% | |
| GCCTGTTGAAGAAAAGAATT+CGG | - | chr5.3:13093643-13093662 | None:intergenic | 35.0% | |
| GCTACTTGCTTTGATTAATG+GGG | + | chr5.3:13098143-13098162 | MS.gene68079:intron | 35.0% | |
| GGACAAAACACTATTGTTCT+AGG | - | chr5.3:13095061-13095080 | None:intergenic | 35.0% | |
| GTCCAAATTGTACCCAAAAT+TGG | - | chr5.3:13096565-13096584 | None:intergenic | 35.0% | |
| GTCCATGAAAACACCAAATT+GGG | + | chr5.3:13096277-13096296 | MS.gene68079:intron | 35.0% | |
| GTTCTTAAACATGGATGGAT+GGG | + | chr5.3:13097381-13097400 | MS.gene68079:intron | 35.0% | |
| TCACAGTTCTTAAACATGGA+TGG | + | chr5.3:13097376-13097395 | MS.gene68079:intron | 35.0% | |
| TCCATGAAAACACCAAATTG+GGG | + | chr5.3:13096278-13096297 | MS.gene68079:intron | 35.0% | |
| TCTTGCCTTAAGAGTTTCAA+TGG | + | chr5.3:13095983-13096002 | MS.gene68079:CDS | 35.0% | |
| TGAAAATTGGTGTACTGTCA+CGG | - | chr5.3:13095851-13095870 | None:intergenic | 35.0% | |
| TGATCACATAAAACACCACA+TGG | - | chr5.3:13097306-13097325 | None:intergenic | 35.0% | |
| TGATGTACTTATAAGGTCTG+TGG | + | chr5.3:13095732-13095751 | MS.gene68079:intron | 35.0% | |
| TGGTTCACAGTTCTTAAACA+TGG | + | chr5.3:13097372-13097391 | MS.gene68079:intron | 35.0% | |
| TGTACTCAAAAGCCACTAAA+TGG | - | chr5.3:13098776-13098795 | None:intergenic | 35.0% | |
| TGTATCTGATATTCTTGCGT+CGG | + | chr5.3:13098377-13098396 | MS.gene68079:CDS | 35.0% | |
| TGTCCATGAAAACACCAAAT+TGG | + | chr5.3:13096276-13096295 | MS.gene68079:intron | 35.0% | |
| TTAGACATTGAAGTTCCATG+TGG | + | chr5.3:13097288-13097307 | MS.gene68079:intron | 35.0% | |
| TTGAGAAATGACCTGAATGT+GGG | + | chr5.3:13098191-13098210 | MS.gene68079:intron | 35.0% | |
| TTGATGCTTAATCCCCAATT+TGG | - | chr5.3:13096293-13096312 | None:intergenic | 35.0% | |
| TTTGAGAAATGACCTGAATG+TGG | + | chr5.3:13098190-13098209 | MS.gene68079:intron | 35.0% | |
| ! | ACCGAATTCTTTTCTTCAAC+AGG | + | chr5.3:13093639-13093658 | MS.gene68079:intron | 35.0% |
| ! | ACTGATTCAGGACTAGAAAT+AGG | + | chr5.3:13095327-13095346 | MS.gene68079:intron | 35.0% |
| ! | AGAACTCCAACTGTATTTTC+CGG | - | chr5.3:13094134-13094153 | None:intergenic | 35.0% |
| ! | ATTTAGGTTAACCTGAGTCT+TGG | - | chr5.3:13093767-13093786 | None:intergenic | 35.0% |
| ! | GCGCTTGATGTAGTTAATTT+TGG | + | chr5.3:13095601-13095620 | MS.gene68079:CDS | 35.0% |
| ! | TAGGACCTACACTTTGAAAA+TGG | + | chr5.3:13097699-13097718 | MS.gene68079:intron | 35.0% |
| ! | TTTGAAGTTTGAATGTTGCC+TGG | + | chr5.3:13098750-13098769 | MS.gene68079:intron | 35.0% |
| !! | AACCTCAGATTGATTTGGAA+TGG | - | chr5.3:13098534-13098553 | None:intergenic | 35.0% |
| !! | AACTGGATATGATTTTGGTG+TGG | + | chr5.3:13095935-13095954 | MS.gene68079:CDS | 35.0% |
| !! | AAGACAACTGATTTGATGGT+TGG | + | chr5.3:13096137-13096156 | MS.gene68079:intron | 35.0% |
| !! | AGTACATCAGAAAGAGCATT+TGG | - | chr5.3:13095721-13095740 | None:intergenic | 35.0% |
| !! | CCACTATTTTCTGGAAAACA+AGG | + | chr5.3:13094371-13094390 | MS.gene68079:intron | 35.0% |
| !! | TATTTTCTGGAAAACAAGGG+TGG | + | chr5.3:13094375-13094394 | MS.gene68079:intron | 35.0% |
| !!! | CAGGACACACTATTTTTGTT+GGG | - | chr5.3:13096479-13096498 | None:intergenic | 35.0% |
| !!! | CCTTGTTTTCCAGAAAATAG+TGG | - | chr5.3:13094374-13094393 | None:intergenic | 35.0% |
| AAATTCTGCCGAAGCTATAG+CGG | + | chr5.3:13095081-13095100 | MS.gene68079:intron | 40.0% | |
| AACGCTCTCCCTTAAATGAT+AGG | + | chr5.3:13094627-13094646 | MS.gene68079:intron | 40.0% | |
| AAGCGATCTAGGCAAGATAT+TGG | + | chr5.3:13094196-13094215 | MS.gene68079:CDS | 40.0% | |
| ACCCTAGAAATTCGCATGAT+AGG | - | chr5.3:13093613-13093632 | None:intergenic | 40.0% | |
| ACCCTATCATGCGAATTTCT+AGG | + | chr5.3:13093608-13093627 | MS.gene68079:intron | 40.0% | |
| ACGAAATGTGACTGTAATCG+AGG | - | chr5.3:13097442-13097461 | None:intergenic | 40.0% | |
| ACTGATAGCAGCACAGAAAA+TGG | - | chr5.3:13099101-13099120 | None:intergenic | 40.0% | |
| AGCAGCACAGAAAATGGAAA+AGG | - | chr5.3:13099095-13099114 | None:intergenic | 40.0% | |
| AGGGTAGATTGAAATCGAGA+GGG | - | chr5.3:13093593-13093612 | None:intergenic | 40.0% | |
| AGTTCTTATAATGGCCGGAA+AGG | + | chr5.3:13094148-13094167 | MS.gene68079:CDS | 40.0% | |
| ATAATCTCAATGAGAAGGCG+CGG | - | chr5.3:13094969-13094988 | None:intergenic | 40.0% | |
| ATTGAAGGTCAGCTACTGTT+TGG | - | chr5.3:13097026-13097045 | None:intergenic | 40.0% | |
| CAGCAATAGTTGGATTTGTG+TGG | + | chr5.3:13098700-13098719 | MS.gene68079:intron | 40.0% | |
| CCAACAAAAATAGTGTGTCC+TGG | + | chr5.3:13096477-13096496 | MS.gene68079:intron | 40.0% | |
| CCCTAGAAATTCGCATGATA+GGG | - | chr5.3:13093612-13093631 | None:intergenic | 40.0% | |
| CCCTATCATGCGAATTTCTA+GGG | + | chr5.3:13093609-13093628 | MS.gene68079:intron | 40.0% | |
| CCCTTCTATCAAAGATTTGC+TGG | + | chr5.3:13098505-13098524 | MS.gene68079:CDS | 40.0% | |
| CGCAAGAATATCAGATACAC+GGG | - | chr5.3:13098376-13098395 | None:intergenic | 40.0% | |
| CTACTAAGTCACTTAGCAGT+TGG | + | chr5.3:13096778-13096797 | MS.gene68079:intron | 40.0% | |
| CTAGCACTCACTCCTTTATT+GGG | - | chr5.3:13097761-13097780 | None:intergenic | 40.0% | |
| GATTCAGGACTAGAAATAGG+CGG | + | chr5.3:13095330-13095349 | MS.gene68079:intron | 40.0% | |
| GCAAAAGTTTCTAAGCTGAC+TGG | - | chr5.3:13096839-13096858 | None:intergenic | 40.0% | |
| GCAGCACAGAAAATGGAAAA+GGG | - | chr5.3:13099094-13099113 | None:intergenic | 40.0% | |
| GCCAGCAAATCTTTGATAGA+AGG | - | chr5.3:13098509-13098528 | None:intergenic | 40.0% | |
| GCTGACCTTCAATTGAAATC+AGG | + | chr5.3:13097033-13097052 | MS.gene68079:intron | 40.0% | |
| GGATTATTGTCTTTGCTGGA+AGG | + | chr5.3:13095430-13095449 | MS.gene68079:CDS | 40.0% | |
| GTTCTTATAATGGCCGGAAA+GGG | + | chr5.3:13094149-13094168 | MS.gene68079:CDS | 40.0% | |
| GTTGGAGTTCTTATAATGGC+CGG | + | chr5.3:13094143-13094162 | MS.gene68079:CDS | 40.0% | |
| TACAGAGTTGACAGTGCATT+AGG | - | chr5.3:13099045-13099064 | None:intergenic | 40.0% | |
| TACTATCCGCTACTGACAAT+TGG | - | chr5.3:13098302-13098321 | None:intergenic | 40.0% | |
| TAGGGTAGATTGAAATCGAG+AGG | - | chr5.3:13093594-13093613 | None:intergenic | 40.0% | |
| TATGTCCCACCACTTTATGT+GGG | - | chr5.3:13097727-13097746 | None:intergenic | 40.0% | |
| TCATGAACCGTTAGTTGCTA+TGG | + | chr5.3:13098021-13098040 | MS.gene68079:intron | 40.0% | |
| TCCAAACTTGGATCCTGAAT+TGG | + | chr5.3:13095959-13095978 | MS.gene68079:CDS | 40.0% | |
| TCGAATCCGGAAAATACAGT+TGG | + | chr5.3:13094125-13094144 | MS.gene68079:CDS | 40.0% | |
| TCTAGCACTCACTCCTTTAT+TGG | - | chr5.3:13097762-13097781 | None:intergenic | 40.0% | |
| TGATGACAAGCCATCAAATG+AGG | + | chr5.3:13099159-13099178 | MS.gene68079:CDS | 40.0% | |
| ! | GAAAATTAGTGGGTCAAGCA+AGG | - | chr5.3:13096204-13096223 | None:intergenic | 40.0% |
| ! | GACAGTACACCAATTTTCAC+TGG | + | chr5.3:13095852-13095871 | MS.gene68079:intron | 40.0% |
| ! | GCGCTAAATCCACTATTTTC+TGG | + | chr5.3:13094362-13094381 | MS.gene68079:intron | 40.0% |
| ! | GCTTGACCCACTAATTTTCA+TGG | + | chr5.3:13096205-13096224 | MS.gene68079:intron | 40.0% |
| ! | GGGTTCCATTTTCAAAGTGT+AGG | - | chr5.3:13097707-13097726 | None:intergenic | 40.0% |
| ! | GGTGGAACTGGATATGATTT+TGG | + | chr5.3:13095930-13095949 | MS.gene68079:CDS | 40.0% |
| !! | AAGATATTGGCTTGCATGCA+TGG | + | chr5.3:13094209-13094228 | MS.gene68079:CDS | 40.0% |
| !! | ATCTGAGGTTAGTCTTTCCA+TGG | + | chr5.3:13098544-13098563 | MS.gene68079:intron | 40.0% |
| !! | TTTTGGTGTGGATCCAAACT+TGG | + | chr5.3:13095947-13095966 | MS.gene68079:CDS | 40.0% |
| !!! | CCAGGACACACTATTTTTGT+TGG | - | chr5.3:13096480-13096499 | None:intergenic | 40.0% |
| !!! | TCCCCAATTTGGTGTTTTCA+TGG | - | chr5.3:13096282-13096301 | None:intergenic | 40.0% |
| AAAAGAGGGGAGAGAAGCAA+AGG | - | chr5.3:13098661-13098680 | None:intergenic | 45.0% | |
| AATGTTGCCTGGCCATTTAG+TGG | + | chr5.3:13098761-13098780 | MS.gene68079:intron | 45.0% | |
| ACAATCTAGTCACGTCTGAC+TGG | - | chr5.3:13098341-13098360 | None:intergenic | 45.0% | |
| ACCTCTGTACTTATGTGTGC+AGG | + | chr5.3:13097956-13097975 | MS.gene68079:intron | 45.0% | |
| AGCAATGTAGCCTGTTGTAC+TGG | - | chr5.3:13098083-13098102 | None:intergenic | 45.0% | |
| AGCTCTCCAATTGTCAGTAG+CGG | + | chr5.3:13098293-13098312 | MS.gene68079:intron | 45.0% | |
| AGGGTCATTTATGTCAACCC+CGG | - | chr5.3:13098489-13098508 | None:intergenic | 45.0% | |
| AGTAGGGGTAAGTCTTTGTC+AGG | + | chr5.3:13097836-13097855 | MS.gene68079:intron | 45.0% | |
| ATCTTGCCTAGATCGCTTGT+AGG | - | chr5.3:13094194-13094213 | None:intergenic | 45.0% | |
| ATGGAACCCACATAAAGTGG+TGG | + | chr5.3:13097718-13097737 | MS.gene68079:intron | 45.0% | |
| CAAAACACGAACACCCTTTC+CGG | - | chr5.3:13094165-13094184 | None:intergenic | 45.0% | |
| CAATGGAAGAGGAAAGAGCT+AGG | + | chr5.3:13096000-13096019 | MS.gene68079:CDS | 45.0% | |
| CAGCTGGAACATGAACGATA+TGG | - | chr5.3:13095696-13095715 | None:intergenic | 45.0% | |
| CATATCGTTCATGTTCCAGC+TGG | + | chr5.3:13095694-13095713 | MS.gene68079:CDS | 45.0% | |
| CTATAGAGAAGGGAAAGCCA+TGG | + | chr5.3:13098226-13098245 | MS.gene68079:intron | 45.0% | |
| CTTAAGGCAAGAGCCAATTC+AGG | - | chr5.3:13095975-13095994 | None:intergenic | 45.0% | |
| GAGAAAGAGGCAATGATGAC+AGG | - | chr5.3:13096889-13096908 | None:intergenic | 45.0% | |
| GATCATATCAGGCGAGAAAG+AGG | - | chr5.3:13096902-13096921 | None:intergenic | 45.0% | |
| GATGCTGCCAAACAAGAGAA+AGG | + | chr5.3:13096053-13096072 | MS.gene68079:CDS | 45.0% | |
| GCACTATACCGCTATAGCTT+CGG | - | chr5.3:13095092-13095111 | None:intergenic | 45.0% | |
| GCCAATTCAGGATCCAAGTT+TGG | - | chr5.3:13095963-13095982 | None:intergenic | 45.0% | |
| GCTATAGCTTCGGCAGAATT+TGG | - | chr5.3:13095082-13095101 | None:intergenic | 45.0% | |
| GCTTGAGCTTGAAATCGAGA+AGG | - | chr5.3:13093718-13093737 | None:intergenic | 45.0% | |
| GGGTAGATTGAAATCGAGAG+GGG | - | chr5.3:13093592-13093611 | None:intergenic | 45.0% | |
| GGTAGATTGAAATCGAGAGG+GGG | - | chr5.3:13093591-13093610 | None:intergenic | 45.0% | |
| GTATGTCCCACCACTTTATG+TGG | - | chr5.3:13097728-13097747 | None:intergenic | 45.0% | |
| GTCAGACGTGACTAGATTGT+TGG | + | chr5.3:13098341-13098360 | MS.gene68079:CDS | 45.0% | |
| TAATTCCTTTGGCAGCTTCC+CGG | + | chr5.3:13098467-13098486 | MS.gene68079:intron | 45.0% | |
| TCAAAAGCCACTAAATGGCC+AGG | - | chr5.3:13098771-13098790 | None:intergenic | 45.0% | |
| TCCTGCACACATAAGTACAG+AGG | - | chr5.3:13097960-13097979 | None:intergenic | 45.0% | |
| TGAAGCAAAGACTGAGAAGC+TGG | + | chr5.3:13095633-13095652 | MS.gene68079:CDS | 45.0% | |
| TGAGCCTCCTTTCTCTTGTT+TGG | - | chr5.3:13096063-13096082 | None:intergenic | 45.0% | |
| TGGAACCCACATAAAGTGGT+GGG | + | chr5.3:13097719-13097738 | MS.gene68079:intron | 45.0% | |
| TGGTATTCAGGTGGCACAAT+TGG | + | chr5.3:13095371-13095390 | MS.gene68079:CDS | 45.0% | |
| TTACATCATGGCCAACTGCA+GGG | - | chr5.3:13097108-13097127 | None:intergenic | 45.0% | |
| ! | ACACCAATTTTCACTGGCGA+TGG | + | chr5.3:13095858-13095877 | MS.gene68079:CDS | 45.0% |
| ! | ACCAATTTTCACTGGCGATG+GGG | + | chr5.3:13095860-13095879 | MS.gene68079:CDS | 45.0% |
| ! | ATCGAGGCACTTCTCATTGA+TGG | - | chr5.3:13097426-13097445 | None:intergenic | 45.0% |
| ! | CACAACACAGCTCCTTTTTG+AGG | + | chr5.3:13097335-13097354 | MS.gene68079:intron | 45.0% |
| ! | CACCAATTTTCACTGGCGAT+GGG | + | chr5.3:13095859-13095878 | MS.gene68079:CDS | 45.0% |
| ! | GAAAACAAGGGTGGCATTGA+TGG | + | chr5.3:13094384-13094403 | MS.gene68079:intron | 45.0% |
| !! | TGCTTCAGAAGTTGATGCAC+TGG | - | chr5.3:13096111-13096130 | None:intergenic | 45.0% |
| !! | TGTCAGTAGCGGATAGTACA+GGG | + | chr5.3:13098304-13098323 | MS.gene68079:CDS | 45.0% |
| !! | TTGTCAGTAGCGGATAGTAC+AGG | + | chr5.3:13098303-13098322 | MS.gene68079:CDS | 45.0% |
| !! | TATGAAAATAATAATTAAAA+AGG | - | chr5.3:13096608-13096627 | None:intergenic | 5.0% |
| !!! | TTTGAAATAATATATATTAT+AGG | + | chr5.3:13096537-13096556 | MS.gene68079:intron | 5.0% |
| AATTCCTTTGGCAGCTTCCC+GGG | + | chr5.3:13098468-13098487 | MS.gene68079:intron | 50.0% | |
| ACAAGATGCGGCAATGACTG+AGG | + | chr5.3:13096082-13096101 | MS.gene68079:CDS | 50.0% | |
| CAAGATGCGGCAATGACTGA+GGG | + | chr5.3:13096083-13096102 | MS.gene68079:CDS | 50.0% | |
| CTGAAAGGAGGTGATCTACC+AGG | - | chr5.3:13096498-13096517 | None:intergenic | 50.0% | |
| CTTACATCATGGCCAACTGC+AGG | - | chr5.3:13097109-13097128 | None:intergenic | 50.0% | |
| GAAAGGAGGCTCACAAGATG+CGG | + | chr5.3:13096070-13096089 | MS.gene68079:CDS | 50.0% | |
| GAACCTAGCTGCTGGTATTC+AGG | + | chr5.3:13095359-13095378 | MS.gene68079:CDS | 50.0% | |
| GCAAGCGCTTGCAATGTCAA+TGG | + | chr5.3:13097078-13097097 | MS.gene68079:CDS | 50.0% | |
| GCAGGAAGCTGCAGCAAAAA+AGG | + | chr5.3:13096022-13096041 | MS.gene68079:CDS | 50.0% | |
| GCTGCCAAACAAGAGAAAGG+AGG | + | chr5.3:13096056-13096075 | MS.gene68079:CDS | 50.0% | |
| GGGTCATTTATGTCAACCCC+GGG | - | chr5.3:13098488-13098507 | None:intergenic | 50.0% | |
| GTCACACCTACAAGCGATCT+AGG | + | chr5.3:13094185-13094204 | MS.gene68079:CDS | 50.0% | |
| TAGAGAAGGGAAAGCCATGG+TGG | + | chr5.3:13098229-13098248 | MS.gene68079:intron | 50.0% | |
| TCAATGGATGACCCTGCAGT+TGG | + | chr5.3:13097094-13097113 | MS.gene68079:CDS | 50.0% | |
| TCCCCATCGCCAGTGAAAAT+TGG | - | chr5.3:13095864-13095883 | None:intergenic | 50.0% | |
| TTGTTTGGCAGCATCCTCTG+CGG | - | chr5.3:13096048-13096067 | None:intergenic | 50.0% | |
| ! | ATTTTCACTGGCGATGGGGA+AGG | + | chr5.3:13095864-13095883 | MS.gene68079:CDS | 50.0% |
| !! | GAAAGAGCATTTGGACCAGC+TGG | - | chr5.3:13095712-13095731 | None:intergenic | 50.0% |
| !! | GTCAGTAGCGGATAGTACAG+GGG | + | chr5.3:13098305-13098324 | MS.gene68079:CDS | 50.0% |
| !!! | CGGAAAGGGTGTTCGTGTTT+TGG | + | chr5.3:13094163-13094182 | MS.gene68079:CDS | 50.0% |
| AGCGGATAGTACAGGGGATC+AGG | + | chr5.3:13098311-13098330 | MS.gene68079:CDS | 55.0% | |
| ATCTCACCTAGTGCCAGCTC+AGG | - | chr5.3:13097166-13097185 | None:intergenic | 55.0% | |
| ATCTGCAGATGACCCTGAGC+TGG | + | chr5.3:13097150-13097169 | MS.gene68079:CDS | 55.0% | |
| ATTCCTTTGGCAGCTTCCCG+GGG | + | chr5.3:13098469-13098488 | MS.gene68079:intron | 55.0% | |
| CCACCTGAATACCAGCAGCT+AGG | - | chr5.3:13095365-13095384 | None:intergenic | 55.0% | |
| CCTAGCTGCTGGTATTCAGG+TGG | + | chr5.3:13095362-13095381 | MS.gene68079:CDS | 55.0% | |
| GGAAGAGGAAAGAGCTAGGC+AGG | + | chr5.3:13096004-13096023 | MS.gene68079:CDS | 55.0% | |
| GGTGAGATGAACCTAGCTGC+TGG | + | chr5.3:13095351-13095370 | MS.gene68079:CDS | 55.0% | |
| TCTCACCTAGTGCCAGCTCA+GGG | - | chr5.3:13097165-13097184 | None:intergenic | 55.0% | |
| TGCAGCAAAAAAGGCCGCAG+AGG | + | chr5.3:13096031-13096050 | MS.gene68079:CDS | 55.0% | |
| ! | CATTTGCGGTGCCAAGACTC+AGG | + | chr5.3:13093753-13093772 | MS.gene68079:CDS | 55.0% |
| ! | TGCAAGCGCTTGCTGCAGTA+GGG | - | chr5.3:13097071-13097090 | None:intergenic | 55.0% |
| ! | TTGCAAGCGCTTGCTGCAGT+AGG | - | chr5.3:13097072-13097091 | None:intergenic | 55.0% |
| GATGACCCTGAGCTGGCACT+AGG | + | chr5.3:13097157-13097176 | MS.gene68079:CDS | 60.0% | |
| TTCACTGGCGATGGGGAAGG+TGG | + | chr5.3:13095867-13095886 | MS.gene68079:CDS | 60.0% | |
| AGCTGCAGCTGCAGCTGCAG+CGG | - | chr5.3:13095907-13095926 | None:intergenic | 65.0% | |
| CAACCCCGGGAAGCTGCCAA+AGG | - | chr5.3:13098475-13098494 | None:intergenic | 65.0% | |
| CTGCAGCTGCAGCTGCAGCT+GGG | + | chr5.3:13095907-13095926 | MS.gene68079:CDS | 65.0% | |
| GGCGATGGGGAAGGTGGAAG+CGG | + | chr5.3:13095873-13095892 | MS.gene68079:CDS | 65.0% | |
| TGCAGCTGCAGCTGCAGCTG+GGG | + | chr5.3:13095908-13095927 | MS.gene68079:CDS | 65.0% | |
| GCAGCTGCAGCTGCAGCTGG+GGG | + | chr5.3:13095909-13095928 | MS.gene68079:CDS | 70.0% | |
| GCTGCAGCTGCAGCTGCAGC+TGG | + | chr5.3:13095906-13095925 | MS.gene68079:CDS | 70.0% | |
| GCTGCAGCTGGGGGTGGAAC+TGG | + | chr5.3:13095918-13095937 | MS.gene68079:CDS | 70.0% | |
| TGCAGCTGCAGCTGCAGCGG+CGG | - | chr5.3:13095904-13095923 | None:intergenic | 70.0% | |
| GCTGCAGCTGCAGCTGGGGG+TGG | + | chr5.3:13095912-13095931 | MS.gene68079:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 13093560 | 13099192 | 13093560 | ID=MS.gene68079 |
| chr5.3 | mRNA | 13093560 | 13099192 | 13093560 | ID=MS.gene68079.t1;Parent=MS.gene68079 |
| chr5.3 | exon | 13093560 | 13093571 | 13093560 | ID=MS.gene68079.t1.exon1;Parent=MS.gene68079.t1 |
| chr5.3 | CDS | 13093560 | 13093571 | 13093560 | ID=cds.MS.gene68079.t1;Parent=MS.gene68079.t1 |
| chr5.3 | exon | 13093661 | 13093774 | 13093661 | ID=MS.gene68079.t1.exon2;Parent=MS.gene68079.t1 |
| chr5.3 | CDS | 13093661 | 13093774 | 13093661 | ID=cds.MS.gene68079.t1;Parent=MS.gene68079.t1 |
| chr5.3 | exon | 13094125 | 13094230 | 13094125 | ID=MS.gene68079.t1.exon3;Parent=MS.gene68079.t1 |
| chr5.3 | CDS | 13094125 | 13094230 | 13094125 | ID=cds.MS.gene68079.t1;Parent=MS.gene68079.t1 |
| chr5.3 | exon | 13095337 | 13095451 | 13095337 | ID=MS.gene68079.t1.exon4;Parent=MS.gene68079.t1 |
| chr5.3 | CDS | 13095337 | 13095451 | 13095337 | ID=cds.MS.gene68079.t1;Parent=MS.gene68079.t1 |
| chr5.3 | exon | 13095537 | 13095746 | 13095537 | ID=MS.gene68079.t1.exon5;Parent=MS.gene68079.t1 |
| chr5.3 | CDS | 13095537 | 13095746 | 13095537 | ID=cds.MS.gene68079.t1;Parent=MS.gene68079.t1 |
| chr5.3 | exon | 13095857 | 13096154 | 13095857 | ID=MS.gene68079.t1.exon6;Parent=MS.gene68079.t1 |
| chr5.3 | CDS | 13095857 | 13096154 | 13095857 | ID=cds.MS.gene68079.t1;Parent=MS.gene68079.t1 |
| chr5.3 | exon | 13097055 | 13097178 | 13097055 | ID=MS.gene68079.t1.exon7;Parent=MS.gene68079.t1 |
| chr5.3 | CDS | 13097055 | 13097178 | 13097055 | ID=cds.MS.gene68079.t1;Parent=MS.gene68079.t1 |
| chr5.3 | exon | 13098295 | 13098398 | 13098295 | ID=MS.gene68079.t1.exon8;Parent=MS.gene68079.t1 |
| chr5.3 | CDS | 13098295 | 13098398 | 13098295 | ID=cds.MS.gene68079.t1;Parent=MS.gene68079.t1 |
| chr5.3 | exon | 13098482 | 13098550 | 13098482 | ID=MS.gene68079.t1.exon9;Parent=MS.gene68079.t1 |
| chr5.3 | CDS | 13098482 | 13098550 | 13098482 | ID=cds.MS.gene68079.t1;Parent=MS.gene68079.t1 |
| chr5.3 | exon | 13099148 | 13099192 | 13099148 | ID=MS.gene68079.t1.exon10;Parent=MS.gene68079.t1 |
| chr5.3 | CDS | 13099148 | 13099192 | 13099148 | ID=cds.MS.gene68079.t1;Parent=MS.gene68079.t1 |
| Gene Sequence |
| Protein sequence |
