Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59485.t1 | XP_003612199.1 | 92.2 | 398 | 31 | 0 | 1 | 398 | 1 | 398 | 5.90E-149 | 537.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59485.t1 | O82143 | 73.8 | 404 | 97 | 3 | 1 | 397 | 1 | 402 | 5.6e-92 | 339.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59485.t1 | G7JXI6 | 92.2 | 398 | 31 | 0 | 1 | 398 | 1 | 398 | 4.2e-149 | 537.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59485.t1 | MTR_5g022440 | 99.246 | 398 | 3 | 0 | 1 | 398 | 1 | 398 | 0.0 | 802 |
| MS.gene59485.t1 | MTR_8g075390 | 80.348 | 402 | 60 | 5 | 1 | 396 | 1 | 389 | 0.0 | 569 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59485.t1 | AT4G38630 | 65.174 | 402 | 120 | 7 | 1 | 398 | 1 | 386 | 8.55e-171 | 483 |
Find 101 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGCAGCTGCAGCTGCAGC+TGG | 0.192483 | 5.4:+13906996 | MS.gene59485:CDS |
| CGGAAAGGGTGTTCGTGTTT+TGG | 0.243942 | 5.4:+13905252 | MS.gene59485:CDS |
| GCGCTTGATGTAGTTAATTT+TGG | 0.247694 | 5.4:+13906691 | MS.gene59485:CDS |
| CAAAACACGAACACCCTTTC+CGG | 0.267611 | 5.4:-13905251 | None:intergenic |
| CAATAAGACAACTGATTTGA+TGG | 0.280153 | 5.4:+13907223 | MS.gene59485:CDS |
| TATTTCTTCTCCTCATTTGA+TGG | 0.295179 | 5.4:-13910259 | None:intergenic |
| TGAGCCTCCTTTCTCTTGTT+TGG | 0.297999 | 5.4:-13907150 | None:intergenic |
| CAAAGGATTATTGTCTTTGC+TGG | 0.298005 | 5.4:+13906516 | MS.gene59485:CDS |
| GGTGGAACTGGATATGATTT+TGG | 0.301276 | 5.4:+13907020 | MS.gene59485:CDS |
| CCCTTCTATCAAAGATTTGC+TGG | 0.304569 | 5.4:+13909595 | MS.gene59485:CDS |
| GAACCTAGCTGCTGGTATTC+AGG | 0.311840 | 5.4:+13906449 | MS.gene59485:CDS |
| CTGCAGCTGCAGCTGCAGCT+GGG | 0.313032 | 5.4:+13906997 | MS.gene59485:CDS |
| TCCCCATCGCCAGTGAAAAT+TGG | 0.318823 | 5.4:-13906951 | None:intergenic |
| TAATTCCTTTGGCAGCTTCC+CGG | 0.320953 | 5.4:+13909557 | MS.gene59485:intron |
| CTCTTTCTGATGTACTTATA+AGG | 0.321346 | 5.4:+13906815 | MS.gene59485:CDS |
| CTCTTCCATTGAAACTCTTA+AGG | 0.337538 | 5.4:-13907078 | None:intergenic |
| GCCAATTCAGGATCCAAGTT+TGG | 0.345821 | 5.4:-13907050 | None:intergenic |
| AGACTAACCTCAGATTGATT+TGG | 0.348582 | 5.4:-13909626 | None:intergenic |
| TACAGTTGGAGTTCTTATAA+TGG | 0.358277 | 5.4:+13905228 | MS.gene59485:CDS |
| ACTGATTCAGGACTAGAAAT+AGG | 0.363462 | 5.4:+13906417 | MS.gene59485:intron |
| AATTCCTTTGGCAGCTTCCC+GGG | 0.364317 | 5.4:+13909558 | MS.gene59485:intron |
| TCCAAACTTGGATCCTGAAT+TGG | 0.370635 | 5.4:+13907049 | MS.gene59485:CDS |
| AAGAAAATGTTGGAGATGAT+AGG | 0.372029 | 5.4:+13906643 | MS.gene59485:CDS |
| GCCAGCAAATCTTTGATAGA+AGG | 0.388474 | 5.4:-13909596 | None:intergenic |
| TGCAGCTGCAGCTGCAGCTG+GGG | 0.392381 | 5.4:+13906998 | MS.gene59485:CDS |
| TGGTATTCAGGTGGCACAAT+TGG | 0.403899 | 5.4:+13906461 | MS.gene59485:CDS |
| ATCTCACCTAGTGCCAGCTC+AGG | 0.409983 | 5.4:-13908253 | None:intergenic |
| CTTAAGGCAAGAGCCAATTC+AGG | 0.410841 | 5.4:-13907062 | None:intergenic |
| TACTATCCGCTACTGACAAT+TGG | 0.413345 | 5.4:-13909389 | None:intergenic |
| AGTACATCAGAAAGAGCATT+TGG | 0.417355 | 5.4:-13906808 | None:intergenic |
| AGCGGATAGTACAGGGGATC+AGG | 0.434310 | 5.4:+13909401 | MS.gene59485:CDS |
| CTTAAGAGTTTCAATGGAAG+AGG | 0.440830 | 5.4:+13907079 | MS.gene59485:CDS |
| TTGCAAGCGCTTGCTGCAGT+AGG | 0.440883 | 5.4:-13908159 | None:intergenic |
| TTGAATAATACAGTCGAATC+CGG | 0.440886 | 5.4:+13905201 | MS.gene59485:intron |
| AAGCGATCTAGGCAAGATAT+TGG | 0.447295 | 5.4:+13905285 | MS.gene59485:CDS |
| ATCTTGCCTAGATCGCTTGT+AGG | 0.450253 | 5.4:-13905280 | None:intergenic |
| TGAAGCAAAGACTGAGAAGC+TGG | 0.459635 | 5.4:+13906723 | MS.gene59485:CDS |
| GAAAGAGCATTTGGACCAGC+TGG | 0.461973 | 5.4:-13906799 | None:intergenic |
| GTCAGACGTGACTAGATTGT+TGG | 0.472662 | 5.4:+13909431 | MS.gene59485:CDS |
| AAGATATTGGCTTGCATGCA+TGG | 0.473341 | 5.4:+13905298 | MS.gene59485:CDS |
| GGAAGAGGAAAGAGCTAGGC+AGG | 0.474797 | 5.4:+13907094 | MS.gene59485:CDS |
| GTCACACCTACAAGCGATCT+AGG | 0.475200 | 5.4:+13905274 | MS.gene59485:CDS |
| TGCAGCTGCAGCTGCAGCGG+CGG | 0.475457 | 5.4:-13906991 | None:intergenic |
| CAGCTGGAACATGAACGATA+TGG | 0.476638 | 5.4:-13906783 | None:intergenic |
| ATTTAGGTTAACCTGAGTCT+TGG | 0.480341 | 5.4:-13904853 | None:intergenic |
| GCAGCTGCAGCTGCAGCTGG+GGG | 0.483504 | 5.4:+13906999 | MS.gene59485:CDS |
| ACAATCTAGTCACGTCTGAC+TGG | 0.487951 | 5.4:-13909428 | None:intergenic |
| GGCGATGGGGAAGGTGGAAG+CGG | 0.487998 | 5.4:+13906963 | MS.gene59485:CDS |
| TTGTCAGTAGCGGATAGTAC+AGG | 0.488303 | 5.4:+13909393 | MS.gene59485:CDS |
| CTTACATCATGGCCAACTGC+AGG | 0.490619 | 5.4:-13908196 | None:intergenic |
| AACCTCAGATTGATTTGGAA+TGG | 0.493549 | 5.4:-13909621 | None:intergenic |
| AGCTGCAGCTGCAGCTGCAG+CGG | 0.494105 | 5.4:-13906994 | None:intergenic |
| TGCAAGCGCTTGCTGCAGTA+GGG | 0.495910 | 5.4:-13908158 | None:intergenic |
| TGCTTCAGAAGTTGATGCAC+TGG | 0.500973 | 5.4:-13907198 | None:intergenic |
| AGAAAATGTTGGAGATGATA+GGG | 0.513265 | 5.4:+13906644 | MS.gene59485:CDS |
| TCTTGCCTTAAGAGTTTCAA+TGG | 0.516561 | 5.4:+13907073 | MS.gene59485:CDS |
| GTTGGAGTTCTTATAATGGC+CGG | 0.522830 | 5.4:+13905232 | MS.gene59485:CDS |
| GTTCTTATAATGGCCGGAAA+GGG | 0.529679 | 5.4:+13905238 | MS.gene59485:CDS |
| GATGCTGTTAATCTCATTTG+CGG | 0.530412 | 5.4:+13904828 | MS.gene59485:CDS |
| GGATTATTGTCTTTGCTGGA+AGG | 0.537771 | 5.4:+13906520 | MS.gene59485:CDS |
| GAAGCATGAAAAGAAAATGT+TGG | 0.539117 | 5.4:+13906633 | MS.gene59485:CDS |
| ATCTGCAGATGACCCTGAGC+TGG | 0.542125 | 5.4:+13908240 | MS.gene59485:CDS |
| AGTTCTTATAATGGCCGGAA+AGG | 0.543234 | 5.4:+13905237 | MS.gene59485:CDS |
| CATTTGCGGTGCCAAGACTC+AGG | 0.548520 | 5.4:+13904842 | MS.gene59485:CDS |
| ATCTTCAACCATGGTGCTCG+AGG | 0.555601 | 5.4:+13904639 | None:intergenic |
| CCAGCAAATCTTTGATAGAA+GGG | 0.562714 | 5.4:-13909595 | None:intergenic |
| TGATGACAAGCCATCAAATG+AGG | 0.567204 | 5.4:+13910249 | MS.gene59485:CDS |
| TATCTGTATCTCTTACATCA+TGG | 0.567461 | 5.4:-13908207 | None:intergenic |
| TTCACTGGCGATGGGGAAGG+TGG | 0.567749 | 5.4:+13906957 | MS.gene59485:CDS |
| CATATCGTTCATGTTCCAGC+TGG | 0.573598 | 5.4:+13906784 | MS.gene59485:CDS |
| TCTGTATTGACAATTCTGAA+TGG | 0.573905 | 5.4:+13904760 | MS.gene59485:CDS |
| CAATGGAAGAGGAAAGAGCT+AGG | 0.574068 | 5.4:+13907090 | MS.gene59485:CDS |
| GCAAGCGCTTGCAATGTCAA+TGG | 0.578213 | 5.4:+13908168 | MS.gene59485:CDS |
| TGTCAGTAGCGGATAGTACA+GGG | 0.579867 | 5.4:+13909394 | MS.gene59485:CDS |
| ATTCCTTTGGCAGCTTCCCG+GGG | 0.587464 | 5.4:+13909559 | MS.gene59485:intron |
| GATGCTGCCAAACAAGAGAA+AGG | 0.587529 | 5.4:+13907143 | MS.gene59485:CDS |
| CGCAAGAATATCAGATACAC+GGG | 0.590827 | 5.4:-13909463 | None:intergenic |
| CCACCTGAATACCAGCAGCT+AGG | 0.595708 | 5.4:-13906452 | None:intergenic |
| GGTGAGATGAACCTAGCTGC+TGG | 0.597381 | 5.4:+13906441 | MS.gene59485:CDS |
| GAAAGGAGGCTCACAAGATG+CGG | 0.600328 | 5.4:+13907160 | MS.gene59485:CDS |
| ACAAGATGCGGCAATGACTG+AGG | 0.600908 | 5.4:+13907172 | MS.gene59485:CDS |
| GGGTCATTTATGTCAACCCC+GGG | 0.601962 | 5.4:-13909575 | None:intergenic |
| TCGAATCCGGAAAATACAGT+TGG | 0.607578 | 5.4:+13905214 | MS.gene59485:CDS |
| GATGACCCTGAGCTGGCACT+AGG | 0.611948 | 5.4:+13908247 | MS.gene59485:CDS |
| AGGGTCATTTATGTCAACCC+CGG | 0.615942 | 5.4:-13909576 | None:intergenic |
| TGTATCTGATATTCTTGCGT+CGG | 0.618378 | 5.4:+13909467 | MS.gene59485:CDS |
| CAAGATGCGGCAATGACTGA+GGG | 0.618753 | 5.4:+13907173 | MS.gene59485:CDS |
| AATTCTGAATGGATGCGTAA+CGG | 0.621250 | 5.4:+13904771 | MS.gene59485:CDS |
| TTACATCATGGCCAACTGCA+GGG | 0.622742 | 5.4:-13908195 | None:intergenic |
| AGCTCTCCAATTGTCAGTAG+CGG | 0.629461 | 5.4:+13909383 | MS.gene59485:intron |
| TCAATGGATGACCCTGCAGT+TGG | 0.633492 | 5.4:+13908184 | MS.gene59485:CDS |
| ATCCATTCCAAATCAATCTG+AGG | 0.635456 | 5.4:+13909619 | MS.gene59485:CDS |
| ACGCAAGAATATCAGATACA+CGG | 0.643826 | 5.4:-13909464 | None:intergenic |
| TCTCACCTAGTGCCAGCTCA+GGG | 0.643932 | 5.4:-13908252 | None:intergenic |
| GCTTGAGCTTGAAATCGAGA+AGG | 0.649113 | 5.4:-13904804 | None:intergenic |
| CCTAGCTGCTGGTATTCAGG+TGG | 0.660293 | 5.4:+13906452 | MS.gene59485:CDS |
| ATAAATTACCTCGAGCACCA+TGG | 0.693882 | 5.4:-13904647 | None:intergenic |
| GCTGCCAAACAAGAGAAAGG+AGG | 0.696072 | 5.4:+13907146 | MS.gene59485:CDS |
| GATTCAGGACTAGAAATAGG+CGG | 0.712728 | 5.4:+13906420 | MS.gene59485:intron |
| GTCAGTAGCGGATAGTACAG+GGG | 0.716711 | 5.4:+13909395 | MS.gene59485:CDS |
| TTGTTTGGCAGCATCCTCTG+CGG | 0.738209 | 5.4:-13907135 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTAACAAGATTAAT+AGG | + | chr5.4:13905813-13905832 | MS.gene59485:intron | 10.0% |
| !! | AACAATAATGATTAAATAAA+GGG | - | chr5.4:13904915-13904934 | None:intergenic | 10.0% |
| !!! | TCCTATTTTTATTATTATTT+GGG | + | chr5.4:13905559-13905578 | MS.gene59485:intron | 10.0% |
| !!! | TTATTTCCAATTTTTTTTAA+GGG | + | chr5.4:13910010-13910029 | MS.gene59485:intron | 10.0% |
| !!! | TTCCTATTTTTATTATTATT+TGG | + | chr5.4:13905558-13905577 | MS.gene59485:intron | 10.0% |
| !!! | TTTATTTCCAATTTTTTTTA+AGG | + | chr5.4:13910009-13910028 | MS.gene59485:intron | 10.0% |
| !! | AAACAAATATCATTTAAAAG+AGG | - | chr5.4:13909766-13909785 | None:intergenic | 15.0% |
| !! | AAATTGGAAATAAATATAAC+AGG | - | chr5.4:13910003-13910022 | None:intergenic | 15.0% |
| !! | AACAAATATCATTTAAAAGA+GGG | - | chr5.4:13909765-13909784 | None:intergenic | 15.0% |
| !! | ATTAATATGATGTAAGATTT+AGG | - | chr5.4:13904872-13904891 | None:intergenic | 15.0% |
| !! | ATTAATTATTAGTGCAAAAA+AGG | - | chr5.4:13909541-13909560 | None:intergenic | 15.0% |
| !! | CAACAATAATGATTAAATAA+AGG | - | chr5.4:13904916-13904935 | None:intergenic | 15.0% |
| !! | TAAATATGTGAATGTATAAT+TGG | - | chr5.4:13909205-13909224 | None:intergenic | 15.0% |
| !! | TATTAACCCTTAAAAAAAAT+TGG | - | chr5.4:13910019-13910038 | None:intergenic | 15.0% |
| !! | TGATGATAAAATAAATAAAG+CGG | - | chr5.4:13907842-13907861 | None:intergenic | 15.0% |
| !!! | AATCATTATTGTTGTTTTTA+TGG | + | chr5.4:13904922-13904941 | MS.gene59485:intron | 15.0% |
| !!! | ATATAAGATCACTTTTTATA+AGG | + | chr5.4:13906249-13906268 | MS.gene59485:intron | 15.0% |
| !!! | GAGTTCTTTTTTAATTTTTT+CGG | - | chr5.4:13906314-13906333 | None:intergenic | 15.0% |
| !!! | GATTTTAGATAATTATGTTT+TGG | - | chr5.4:13907473-13907492 | None:intergenic | 15.0% |
| !!! | TTTTTATGTATTCTTTATCT+AGG | + | chr5.4:13908283-13908302 | MS.gene59485:intron | 15.0% |
| !! | AAAATAAAAAGCAACATCAA+AGG | + | chr5.4:13906499-13906518 | MS.gene59485:CDS | 20.0% |
| !! | ACAAATATCATTTAAAAGAG+GGG | - | chr5.4:13909764-13909783 | None:intergenic | 20.0% |
| !! | AGCTAGAGTTATTATTATAT+TGG | + | chr5.4:13908651-13908670 | MS.gene59485:intron | 20.0% |
| !! | ATTAGTAGAATTCTATTAAG+AGG | + | chr5.4:13908713-13908732 | MS.gene59485:intron | 20.0% |
| !! | GAATTTATAGAAATTGTAAC+TGG | + | chr5.4:13908972-13908991 | MS.gene59485:intron | 20.0% |
| !! | GCCCAAATAATAATAAAAAT+AGG | - | chr5.4:13905563-13905582 | None:intergenic | 20.0% |
| !! | TAATAGAATTCTACTAATCA+AGG | - | chr5.4:13908711-13908730 | None:intergenic | 20.0% |
| !! | TAGTTTATGATAATTGCATA+GGG | + | chr5.4:13905052-13905071 | MS.gene59485:intron | 20.0% |
| !! | TCTTATGTTCAACAAAATAA+TGG | + | chr5.4:13906880-13906899 | MS.gene59485:intron | 20.0% |
| !! | TGAAATATAACAGTTTCATA+AGG | - | chr5.4:13905662-13905681 | None:intergenic | 20.0% |
| !! | TTAGTTTATGATAATTGCAT+AGG | + | chr5.4:13905051-13905070 | MS.gene59485:intron | 20.0% |
| !! | TTATGTTTCCATATTCATAA+AGG | - | chr5.4:13909896-13909915 | None:intergenic | 20.0% |
| !! | TTATTCAACCTATCATTTAA+GGG | - | chr5.4:13905727-13905746 | None:intergenic | 20.0% |
| !! | TTTATTCAACCTATCATTTA+AGG | - | chr5.4:13905728-13905747 | None:intergenic | 20.0% |
| !!! | AAAAAGCATTTAAAGGTTTT+TGG | - | chr5.4:13905788-13905807 | None:intergenic | 20.0% |
| !!! | AACTGTTATATTTCACATTT+TGG | + | chr5.4:13905667-13905686 | MS.gene59485:intron | 20.0% |
| !!! | AATGGTTTTAAAATCTTAGA+TGG | + | chr5.4:13907758-13907777 | MS.gene59485:intron | 20.0% |
| !!! | AATTCCATAAAGATTTTGAA+TGG | - | chr5.4:13905505-13905524 | None:intergenic | 20.0% |
| !!! | ATATTATAGGATCCAATTTT+GGG | + | chr5.4:13907640-13907659 | MS.gene59485:intron | 20.0% |
| !!! | GATTCTAATTTTCAATTCAT+AGG | + | chr5.4:13908685-13908704 | MS.gene59485:intron | 20.0% |
| !!! | GATTTTGTAGTTTTTAGAAT+AGG | + | chr5.4:13905015-13905034 | MS.gene59485:intron | 20.0% |
| !!! | TAAAGATTTTAAAGGAAGTA+GGG | + | chr5.4:13905966-13905985 | MS.gene59485:intron | 20.0% |
| !!! | TATATTATAGGATCCAATTT+TGG | + | chr5.4:13907639-13907658 | MS.gene59485:intron | 20.0% |
| !!! | TCTATATTTTCTATAGAGAA+GGG | + | chr5.4:13909306-13909325 | MS.gene59485:intron | 20.0% |
| !!! | TTCCTTTAAAATCTTTAGAA+AGG | - | chr5.4:13905963-13905982 | None:intergenic | 20.0% |
| !!! | TTCTATATTTTCTATAGAGA+AGG | + | chr5.4:13909305-13909324 | MS.gene59485:intron | 20.0% |
| !!! | TTGAAGAAAAAAGCATTTAA+AGG | - | chr5.4:13905795-13905814 | None:intergenic | 20.0% |
| !!! | TTTGGTATTAAGTATGTTTT+TGG | - | chr5.4:13907455-13907474 | None:intergenic | 20.0% |
| !!! | TTTTTATAAGGCATATCTAT+TGG | + | chr5.4:13906261-13906280 | MS.gene59485:intron | 20.0% |
| !!! | TTTTTTTATGCCTAAAAATG+TGG | + | chr5.4:13905840-13905859 | MS.gene59485:intron | 20.0% |
| ! | AAACATCCATGAAAATTAGT+GGG | - | chr5.4:13907304-13907323 | None:intergenic | 25.0% |
| ! | AATAGTTGCCTTTATGAATA+TGG | + | chr5.4:13909885-13909904 | MS.gene59485:intron | 25.0% |
| ! | AATATGGAAACATAATCAGA+AGG | + | chr5.4:13909901-13909920 | MS.gene59485:intron | 25.0% |
| ! | AATTCGAGATATTGAAATTC+TGG | + | chr5.4:13904952-13904971 | MS.gene59485:intron | 25.0% |
| ! | AATTTCAGCAGAAGAATAAT+TGG | + | chr5.4:13909697-13909716 | MS.gene59485:intron | 25.0% |
| ! | AATTTGATGTAGATCATATC+AGG | - | chr5.4:13908003-13908022 | None:intergenic | 25.0% |
| ! | ACATGAAGAAAAAAACATCT+CGG | - | chr5.4:13908617-13908636 | None:intergenic | 25.0% |
| ! | ATTGTAAATTACTAGATGAG+CGG | + | chr5.4:13909013-13909032 | MS.gene59485:intron | 25.0% |
| ! | GACTGTATTATTCAAATCAA+AGG | - | chr5.4:13905196-13905215 | None:intergenic | 25.0% |
| ! | GCACTAATAATTAATTCCTT+TGG | + | chr5.4:13909546-13909565 | MS.gene59485:intron | 25.0% |
| ! | TAAACATCCATGAAAATTAG+TGG | - | chr5.4:13907305-13907324 | None:intergenic | 25.0% |
| ! | TAGCATTCTTCTTCTATTAA+TGG | + | chr5.4:13908897-13908916 | MS.gene59485:intron | 25.0% |
| ! | TCAACCATTCAAAATCTTTA+TGG | + | chr5.4:13905498-13905517 | MS.gene59485:intron | 25.0% |
| ! | TCATCATATAAATACCATGA+TGG | - | chr5.4:13906914-13906933 | None:intergenic | 25.0% |
| ! | TGCAATAATTAATAAGTCGA+TGG | + | chr5.4:13905414-13905433 | MS.gene59485:intron | 25.0% |
| !! | ATCTTCTCATAACAACTTTT+AGG | - | chr5.4:13905885-13905904 | None:intergenic | 25.0% |
| !! | TCTTCTCATAACAACTTTTA+GGG | - | chr5.4:13905884-13905903 | None:intergenic | 25.0% |
| !!! | AAGATTTTAAAACCATTGCA+TGG | - | chr5.4:13907755-13907774 | None:intergenic | 25.0% |
| !!! | AGATTTTAAAACCATTGCAT+GGG | - | chr5.4:13907754-13907773 | None:intergenic | 25.0% |
| !!! | ATTACTGATCATAATTTGCT+TGG | + | chr5.4:13906006-13906025 | MS.gene59485:intron | 25.0% |
| !!! | CTAAAGATTTTAAAGGAAGT+AGG | + | chr5.4:13905965-13905984 | MS.gene59485:intron | 25.0% |
| !!! | GTCCTTTCTAAAGATTTTAA+AGG | + | chr5.4:13905958-13905977 | MS.gene59485:intron | 25.0% |
| !!! | TAGGGTTTTGTTAATGTTTA+AGG | - | chr5.4:13905866-13905885 | None:intergenic | 25.0% |
| !!! | TTGTTTTATTCAGCAATAGT+TGG | + | chr5.4:13909780-13909799 | MS.gene59485:intron | 25.0% |
| !!! | TTTTAACTTTTGTTGGTTTC+TGG | + | chr5.4:13909345-13909364 | MS.gene59485:intron | 25.0% |
| !!! | TTTTTTCTTGTTACTGATTC+AGG | + | chr5.4:13906405-13906424 | MS.gene59485:intron | 25.0% |
| AAAAAGTGGATACCTCAAAA+AGG | - | chr5.4:13908440-13908459 | None:intergenic | 30.0% | |
| AAAAGTTAAAACAACCACCA+TGG | - | chr5.4:13909336-13909355 | None:intergenic | 30.0% | |
| AAATATAGAATCCCACATTC+AGG | - | chr5.4:13909295-13909314 | None:intergenic | 30.0% | |
| AACTGTGAACCATTAAAAAG+TGG | - | chr5.4:13908454-13908473 | None:intergenic | 30.0% | |
| AAGAAAATGTTGGAGATGAT+AGG | + | chr5.4:13906643-13906662 | MS.gene59485:CDS | 30.0% | |
| AGAAAATGTTGGAGATGATA+GGG | + | chr5.4:13906644-13906663 | MS.gene59485:CDS | 30.0% | |
| AGCTACTTGCTTTGATTAAT+GGG | + | chr5.4:13909232-13909251 | MS.gene59485:intron | 30.0% | |
| AGGGTTAATATAGTGTTTGA+AGG | + | chr5.4:13910029-13910048 | MS.gene59485:intron | 30.0% | |
| AGTACACTATTTGCACAATA+TGG | - | chr5.4:13906361-13906380 | None:intergenic | 30.0% | |
| ATAGCATAATCTCAATGAGA+AGG | - | chr5.4:13906063-13906082 | None:intergenic | 30.0% | |
| ATCATCCTGATTTCAATTGA+AGG | - | chr5.4:13908131-13908150 | None:intergenic | 30.0% | |
| ATGGAACTTCAATGTCTAAA+GGG | - | chr5.4:13908377-13908396 | None:intergenic | 30.0% | |
| CTATTAATGGTGAGAAAGTA+GGG | + | chr5.4:13908910-13908929 | MS.gene59485:intron | 30.0% | |
| CTCTTTCTGATGTACTTATA+AGG | + | chr5.4:13906815-13906834 | MS.gene59485:CDS | 30.0% | |
| GAAGCATGAAAAGAAAATGT+TGG | + | chr5.4:13906633-13906652 | MS.gene59485:CDS | 30.0% | |
| GATTGAGATAGGGTAAATTT+AGG | + | chr5.4:13904974-13904993 | MS.gene59485:intron | 30.0% | |
| GCATCAGAATTAAGAATCAT+TGG | - | chr5.4:13905920-13905939 | None:intergenic | 30.0% | |
| TAATGGTTTATCTACCATCA+TGG | + | chr5.4:13906897-13906916 | MS.gene59485:intron | 30.0% | |
| TACAGTTGGAGTTCTTATAA+TGG | + | chr5.4:13905228-13905247 | MS.gene59485:CDS | 30.0% | |
| TAGCTACTTGCTTTGATTAA+TGG | + | chr5.4:13909231-13909250 | MS.gene59485:intron | 30.0% | |
| TATCTGTATCTCTTACATCA+TGG | - | chr5.4:13908210-13908229 | None:intergenic | 30.0% | |
| TATTAATGGTGAGAAAGTAG+GGG | + | chr5.4:13908911-13908930 | MS.gene59485:intron | 30.0% | |
| TATTCTTTATCTAGGAAGCA+TGG | + | chr5.4:13908291-13908310 | MS.gene59485:intron | 30.0% | |
| TATTTCTTCTCCTCATTTGA+TGG | - | chr5.4:13910262-13910281 | None:intergenic | 30.0% | |
| TCAACTAAATCTTCACTGAA+AGG | - | chr5.4:13907603-13907622 | None:intergenic | 30.0% | |
| TCACTTATGTGAAATACTCA+TGG | - | chr5.4:13905585-13905604 | None:intergenic | 30.0% | |
| TCTATTAATGGTGAGAAAGT+AGG | + | chr5.4:13908909-13908928 | MS.gene59485:intron | 30.0% | |
| TCTTGATTATCATGTTGAGT+AGG | + | chr5.4:13909928-13909947 | MS.gene59485:intron | 30.0% | |
| TGAAATTCTGGATTGAGATA+GGG | + | chr5.4:13904964-13904983 | MS.gene59485:intron | 30.0% | |
| TGATTAATGGGGTTATAGAT+TGG | + | chr5.4:13909244-13909263 | MS.gene59485:intron | 30.0% | |
| TGGATGTTTATCTAACGATT+TGG | + | chr5.4:13907315-13907334 | MS.gene59485:intron | 30.0% | |
| TGGGAAAGTTACAATCAATT+TGG | - | chr5.4:13907735-13907754 | None:intergenic | 30.0% | |
| TTAAGCACAAACACAAACAT+CGG | - | chr5.4:13905143-13905162 | None:intergenic | 30.0% | |
| TTATTGGGTGAAATCAATGT+AGG | + | chr5.4:13908770-13908789 | MS.gene59485:intron | 30.0% | |
| TTGAAATTCTGGATTGAGAT+AGG | + | chr5.4:13904963-13904982 | MS.gene59485:intron | 30.0% | |
| TTGAATAATACAGTCGAATC+CGG | + | chr5.4:13905201-13905220 | MS.gene59485:intron | 30.0% | |
| TTGTTAAATAGCAGCTATAG+CGG | - | chr5.4:13906203-13906222 | None:intergenic | 30.0% | |
| ! | ATTCTTTATCTAGGAAGCAT+GGG | + | chr5.4:13908292-13908311 | MS.gene59485:intron | 30.0% |
| ! | CAAATTTGTTTCTTCATGCT+AGG | + | chr5.4:13908038-13908057 | MS.gene59485:intron | 30.0% |
| ! | CAATGTAGTATGTTTTTCCA+TGG | - | chr5.4:13909654-13909673 | None:intergenic | 30.0% |
| ! | CTAGCACTCAATCTTTTATT+GGG | + | chr5.4:13908755-13908774 | MS.gene59485:intron | 30.0% |
| ! | GCTATTTAACAACACTGTTT+TGG | + | chr5.4:13906211-13906230 | MS.gene59485:intron | 30.0% |
| ! | TAGTTTTCCATAGCAACTAA+CGG | - | chr5.4:13909121-13909140 | None:intergenic | 30.0% |
| ! | TCTAGCACTCAATCTTTTAT+TGG | + | chr5.4:13908754-13908773 | MS.gene59485:intron | 30.0% |
| ! | TCTGTATTGACAATTCTGAA+TGG | + | chr5.4:13904760-13904779 | MS.gene59485:CDS | 30.0% |
| ! | TTGAAATGATGAAGCTTTGA+AGG | - | chr5.4:13907812-13907831 | None:intergenic | 30.0% |
| !! | AACAACACTGTTTTGGATAT+TGG | + | chr5.4:13906218-13906237 | MS.gene59485:intron | 30.0% |
| !! | AATAAGTCGATGGCTTTAAA+AGG | + | chr5.4:13905424-13905443 | MS.gene59485:intron | 30.0% |
| !! | AATGGAAAAGGGTATCATTA+AGG | - | chr5.4:13910173-13910192 | None:intergenic | 30.0% |
| !! | ACATTGATTTCACCCAATAA+AGG | + | chr5.4:13908836-13908855 | MS.gene59485:intron | 30.0% |
| !! | ACTGGATTTGTTTTCTGTTA+GGG | - | chr5.4:13909155-13909174 | None:intergenic | 30.0% |
| !! | ATCCAATTTTGGGTACAATT+TGG | + | chr5.4:13907650-13907669 | MS.gene59485:intron | 30.0% |
| !! | ATGTTTAAGGCCACATTTTT+AGG | - | chr5.4:13905853-13905872 | None:intergenic | 30.0% |
| !! | CAATAAGACAACTGATTTGA+TGG | + | chr5.4:13907223-13907242 | MS.gene59485:CDS | 30.0% |
| !! | CACTATTTTCTGGAAAACAA+GGG | + | chr5.4:13905461-13905480 | MS.gene59485:intron | 30.0% |
| !! | GAAACTGTTGCTTTAACATT+TGG | + | chr5.4:13907938-13907957 | MS.gene59485:intron | 30.0% |
| !! | TACTGGATTTGTTTTCTGTT+AGG | - | chr5.4:13909156-13909175 | None:intergenic | 30.0% |
| !!! | GTGGTTGTTTTAACTTTTGT+TGG | + | chr5.4:13909338-13909357 | MS.gene59485:intron | 30.0% |
| !!! | TTGAGGTATCCACTTTTTAA+TGG | + | chr5.4:13908442-13908461 | MS.gene59485:intron | 30.0% |
| AAAATGGAACCCACATAAAG+TGG | + | chr5.4:13908805-13908824 | MS.gene59485:intron | 35.0% | |
| AATTCTGAATGGATGCGTAA+CGG | + | chr5.4:13904771-13904790 | MS.gene59485:CDS | 35.0% | |
| ACAGGCATCAGTAATAAGAT+TGG | - | chr5.4:13909985-13910004 | None:intergenic | 35.0% | |
| ACGCAAGAATATCAGATACA+CGG | - | chr5.4:13909467-13909486 | None:intergenic | 35.0% | |
| ACTAAATCTTCACTGAAAGG+AGG | - | chr5.4:13907600-13907619 | None:intergenic | 35.0% | |
| AGACTAACCTCAGATTGATT+TGG | - | chr5.4:13909629-13909648 | None:intergenic | 35.0% | |
| AGTCACATTTCGTTTGATGA+TGG | + | chr5.4:13908539-13908558 | MS.gene59485:intron | 35.0% | |
| AGTTCTTAAACATGGATGGA+TGG | + | chr5.4:13908470-13908489 | MS.gene59485:intron | 35.0% | |
| ATAAGGCATATCTATTGGTC+AGG | + | chr5.4:13906266-13906285 | MS.gene59485:intron | 35.0% | |
| ATCCATTCCAAATCAATCTG+AGG | + | chr5.4:13909619-13909638 | MS.gene59485:CDS | 35.0% | |
| ATTGTAACTTTCCCATGCAA+TGG | + | chr5.4:13907740-13907759 | MS.gene59485:intron | 35.0% | |
| CAAAGGATTATTGTCTTTGC+TGG | + | chr5.4:13906516-13906535 | MS.gene59485:CDS | 35.0% | |
| CATGGAACTTCAATGTCTAA+AGG | - | chr5.4:13908378-13908397 | None:intergenic | 35.0% | |
| CCAGCAAATCTTTGATAGAA+GGG | - | chr5.4:13909598-13909617 | None:intergenic | 35.0% | |
| CTCTTCCATTGAAACTCTTA+AGG | - | chr5.4:13907081-13907100 | None:intergenic | 35.0% | |
| CTTAAGAGTTTCAATGGAAG+AGG | + | chr5.4:13907079-13907098 | MS.gene59485:CDS | 35.0% | |
| GAAAACAAATCCAGTACAAC+AGG | + | chr5.4:13909160-13909179 | MS.gene59485:intron | 35.0% | |
| GATGCTGTTAATCTCATTTG+CGG | + | chr5.4:13904828-13904847 | MS.gene59485:CDS | 35.0% | |
| GATGTACTTATAAGGTCTGT+GGG | + | chr5.4:13906823-13906842 | MS.gene59485:intron | 35.0% | |
| GCCTGTTGAAGAAAAGAATT+CGG | - | chr5.4:13904732-13904751 | None:intergenic | 35.0% | |
| GCTACTTGCTTTGATTAATG+GGG | + | chr5.4:13909233-13909252 | MS.gene59485:intron | 35.0% | |
| GGACAAAACACTATTGTTCT+AGG | - | chr5.4:13906150-13906169 | None:intergenic | 35.0% | |
| GTCCAAATTGTACCCAAAAT+TGG | - | chr5.4:13907655-13907674 | None:intergenic | 35.0% | |
| GTCCATGAAAACACCAAATT+GGG | + | chr5.4:13907367-13907386 | MS.gene59485:intron | 35.0% | |
| GTTCTTAAACATGGATGGAT+GGG | + | chr5.4:13908471-13908490 | MS.gene59485:intron | 35.0% | |
| TCACAGTTCTTAAACATGGA+TGG | + | chr5.4:13908466-13908485 | MS.gene59485:intron | 35.0% | |
| TCCATGAAAACACCAAATTG+GGG | + | chr5.4:13907368-13907387 | MS.gene59485:intron | 35.0% | |
| TCTTGCCTTAAGAGTTTCAA+TGG | + | chr5.4:13907073-13907092 | MS.gene59485:CDS | 35.0% | |
| TGAAAATTGGTGTACTGTCA+CGG | - | chr5.4:13906941-13906960 | None:intergenic | 35.0% | |
| TGATCACATAAAACACCACA+TGG | - | chr5.4:13908396-13908415 | None:intergenic | 35.0% | |
| TGATGTACTTATAAGGTCTG+TGG | + | chr5.4:13906822-13906841 | MS.gene59485:intron | 35.0% | |
| TGGTTCACAGTTCTTAAACA+TGG | + | chr5.4:13908462-13908481 | MS.gene59485:intron | 35.0% | |
| TGTACTCAAAAGCCACTAAA+TGG | - | chr5.4:13909866-13909885 | None:intergenic | 35.0% | |
| TGTATCTGATATTCTTGCGT+CGG | + | chr5.4:13909467-13909486 | MS.gene59485:CDS | 35.0% | |
| TGTCCATGAAAACACCAAAT+TGG | + | chr5.4:13907366-13907385 | MS.gene59485:intron | 35.0% | |
| TTAGACATTGAAGTTCCATG+TGG | + | chr5.4:13908378-13908397 | MS.gene59485:intron | 35.0% | |
| TTGAGAAATGACCTGAATGT+GGG | + | chr5.4:13909281-13909300 | MS.gene59485:intron | 35.0% | |
| TTGATGCTTAATCCCCAATT+TGG | - | chr5.4:13907383-13907402 | None:intergenic | 35.0% | |
| TTTGAGAAATGACCTGAATG+TGG | + | chr5.4:13909280-13909299 | MS.gene59485:intron | 35.0% | |
| ! | ACCGAATTCTTTTCTTCAAC+AGG | + | chr5.4:13904728-13904747 | MS.gene59485:intron | 35.0% |
| ! | ACTGATTCAGGACTAGAAAT+AGG | + | chr5.4:13906417-13906436 | MS.gene59485:intron | 35.0% |
| ! | AGAACTCCAACTGTATTTTC+CGG | - | chr5.4:13905223-13905242 | None:intergenic | 35.0% |
| ! | ATTTAGGTTAACCTGAGTCT+TGG | - | chr5.4:13904856-13904875 | None:intergenic | 35.0% |
| ! | GCGCTTGATGTAGTTAATTT+TGG | + | chr5.4:13906691-13906710 | MS.gene59485:CDS | 35.0% |
| ! | TAGGACCTACACTTTGAAAA+TGG | + | chr5.4:13908789-13908808 | MS.gene59485:intron | 35.0% |
| ! | TTTGAAGTTTGAATGTTGCC+TGG | + | chr5.4:13909840-13909859 | MS.gene59485:intron | 35.0% |
| !! | AACCTCAGATTGATTTGGAA+TGG | - | chr5.4:13909624-13909643 | None:intergenic | 35.0% |
| !! | AACTGGATATGATTTTGGTG+TGG | + | chr5.4:13907025-13907044 | MS.gene59485:CDS | 35.0% |
| !! | AAGACAACTGATTTGATGGT+TGG | + | chr5.4:13907227-13907246 | MS.gene59485:intron | 35.0% |
| !! | AGTACATCAGAAAGAGCATT+TGG | - | chr5.4:13906811-13906830 | None:intergenic | 35.0% |
| !! | CCACTATTTTCTGGAAAACA+AGG | + | chr5.4:13905460-13905479 | MS.gene59485:intron | 35.0% |
| !! | TATTTTCTGGAAAACAAGGG+TGG | + | chr5.4:13905464-13905483 | MS.gene59485:intron | 35.0% |
| !!! | CAGGACACACTATTTTTGTT+GGG | - | chr5.4:13907569-13907588 | None:intergenic | 35.0% |
| !!! | CCTTGTTTTCCAGAAAATAG+TGG | - | chr5.4:13905463-13905482 | None:intergenic | 35.0% |
| AAATTCTGCCGAAGCTATAG+CGG | + | chr5.4:13906170-13906189 | MS.gene59485:intron | 40.0% | |
| AACGCTCTCCCTTAAATGAT+AGG | + | chr5.4:13905716-13905735 | MS.gene59485:intron | 40.0% | |
| AAGCGATCTAGGCAAGATAT+TGG | + | chr5.4:13905285-13905304 | MS.gene59485:CDS | 40.0% | |
| ACCCTAGAAATTCGCATGAT+AGG | - | chr5.4:13904702-13904721 | None:intergenic | 40.0% | |
| ACCCTATCATGCGAATTTCT+AGG | + | chr5.4:13904697-13904716 | MS.gene59485:intron | 40.0% | |
| ACGAAATGTGACTGTAATCG+AGG | - | chr5.4:13908532-13908551 | None:intergenic | 40.0% | |
| ACTGATAGCAGCACAGAAAA+TGG | - | chr5.4:13910191-13910210 | None:intergenic | 40.0% | |
| AGCAGCACAGAAAATGGAAA+AGG | - | chr5.4:13910185-13910204 | None:intergenic | 40.0% | |
| AGGGTAGATTGAAATCGAGA+GGG | - | chr5.4:13904682-13904701 | None:intergenic | 40.0% | |
| AGTTCTTATAATGGCCGGAA+AGG | + | chr5.4:13905237-13905256 | MS.gene59485:CDS | 40.0% | |
| ATAATCTCAATGAGAAGGCG+CGG | - | chr5.4:13906058-13906077 | None:intergenic | 40.0% | |
| ATTGAAGGTCAGCTACTGTT+TGG | - | chr5.4:13908116-13908135 | None:intergenic | 40.0% | |
| CAGCAATAGTTGGATTTGTG+TGG | + | chr5.4:13909790-13909809 | MS.gene59485:intron | 40.0% | |
| CCAACAAAAATAGTGTGTCC+TGG | + | chr5.4:13907567-13907586 | MS.gene59485:intron | 40.0% | |
| CCCTAGAAATTCGCATGATA+GGG | - | chr5.4:13904701-13904720 | None:intergenic | 40.0% | |
| CCCTATCATGCGAATTTCTA+GGG | + | chr5.4:13904698-13904717 | MS.gene59485:intron | 40.0% | |
| CCCTTCTATCAAAGATTTGC+TGG | + | chr5.4:13909595-13909614 | MS.gene59485:CDS | 40.0% | |
| CGCAAGAATATCAGATACAC+GGG | - | chr5.4:13909466-13909485 | None:intergenic | 40.0% | |
| CTACTAAGTCACTTAGCAGT+TGG | + | chr5.4:13907868-13907887 | MS.gene59485:intron | 40.0% | |
| CTAGCACTCACTCCTTTATT+GGG | - | chr5.4:13908851-13908870 | None:intergenic | 40.0% | |
| GATTCAGGACTAGAAATAGG+CGG | + | chr5.4:13906420-13906439 | MS.gene59485:intron | 40.0% | |
| GCAGCACAGAAAATGGAAAA+GGG | - | chr5.4:13910184-13910203 | None:intergenic | 40.0% | |
| GCCAGCAAATCTTTGATAGA+AGG | - | chr5.4:13909599-13909618 | None:intergenic | 40.0% | |
| GCTGACCTTCAATTGAAATC+AGG | + | chr5.4:13908123-13908142 | MS.gene59485:intron | 40.0% | |
| GGATTATTGTCTTTGCTGGA+AGG | + | chr5.4:13906520-13906539 | MS.gene59485:CDS | 40.0% | |
| GTTCTTATAATGGCCGGAAA+GGG | + | chr5.4:13905238-13905257 | MS.gene59485:CDS | 40.0% | |
| GTTGGAGTTCTTATAATGGC+CGG | + | chr5.4:13905232-13905251 | MS.gene59485:CDS | 40.0% | |
| TACAGAGTTGACAGTGCATT+AGG | - | chr5.4:13910135-13910154 | None:intergenic | 40.0% | |
| TACTATCCGCTACTGACAAT+TGG | - | chr5.4:13909392-13909411 | None:intergenic | 40.0% | |
| TAGGGTAGATTGAAATCGAG+AGG | - | chr5.4:13904683-13904702 | None:intergenic | 40.0% | |
| TATGTCCCACCACTTTATGT+GGG | - | chr5.4:13908817-13908836 | None:intergenic | 40.0% | |
| TCATGAACCGTTAGTTGCTA+TGG | + | chr5.4:13909111-13909130 | MS.gene59485:intron | 40.0% | |
| TCCAAACTTGGATCCTGAAT+TGG | + | chr5.4:13907049-13907068 | MS.gene59485:CDS | 40.0% | |
| TCGAATCCGGAAAATACAGT+TGG | + | chr5.4:13905214-13905233 | MS.gene59485:CDS | 40.0% | |
| TCTAGCACTCACTCCTTTAT+TGG | - | chr5.4:13908852-13908871 | None:intergenic | 40.0% | |
| TGATGACAAGCCATCAAATG+AGG | + | chr5.4:13910249-13910268 | MS.gene59485:CDS | 40.0% | |
| ! | GAAAATTAGTGGGTCAAGCA+AGG | - | chr5.4:13907294-13907313 | None:intergenic | 40.0% |
| ! | GACAGTACACCAATTTTCAC+TGG | + | chr5.4:13906942-13906961 | MS.gene59485:intron | 40.0% |
| ! | GCGCTAAATCCACTATTTTC+TGG | + | chr5.4:13905451-13905470 | MS.gene59485:intron | 40.0% |
| ! | GCTTGACCCACTAATTTTCA+TGG | + | chr5.4:13907295-13907314 | MS.gene59485:intron | 40.0% |
| ! | GGGTTCCATTTTCAAAGTGT+AGG | - | chr5.4:13908797-13908816 | None:intergenic | 40.0% |
| ! | GGTGGAACTGGATATGATTT+TGG | + | chr5.4:13907020-13907039 | MS.gene59485:CDS | 40.0% |
| !! | AAGATATTGGCTTGCATGCA+TGG | + | chr5.4:13905298-13905317 | MS.gene59485:CDS | 40.0% |
| !! | ATCTGAGGTTAGTCTTTCCA+TGG | + | chr5.4:13909634-13909653 | MS.gene59485:intron | 40.0% |
| !! | TTTTGGTGTGGATCCAAACT+TGG | + | chr5.4:13907037-13907056 | MS.gene59485:CDS | 40.0% |
| !!! | CCAGGACACACTATTTTTGT+TGG | - | chr5.4:13907570-13907589 | None:intergenic | 40.0% |
| !!! | TCCCCAATTTGGTGTTTTCA+TGG | - | chr5.4:13907372-13907391 | None:intergenic | 40.0% |
| AAAAGAGGGGAGAGAAGCAA+AGG | - | chr5.4:13909751-13909770 | None:intergenic | 45.0% | |
| AATGTTGCCTGGCCATTTAG+TGG | + | chr5.4:13909851-13909870 | MS.gene59485:intron | 45.0% | |
| ACAATCTAGTCACGTCTGAC+TGG | - | chr5.4:13909431-13909450 | None:intergenic | 45.0% | |
| ACCTCTGTACTTATGTGTGC+AGG | + | chr5.4:13909046-13909065 | MS.gene59485:intron | 45.0% | |
| AGCAATGTAGCCTGTTGTAC+TGG | - | chr5.4:13909173-13909192 | None:intergenic | 45.0% | |
| AGCTCTCCAATTGTCAGTAG+CGG | + | chr5.4:13909383-13909402 | MS.gene59485:intron | 45.0% | |
| AGGGTCATTTATGTCAACCC+CGG | - | chr5.4:13909579-13909598 | None:intergenic | 45.0% | |
| ATCTTGCCTAGATCGCTTGT+AGG | - | chr5.4:13905283-13905302 | None:intergenic | 45.0% | |
| ATGGAACCCACATAAAGTGG+TGG | + | chr5.4:13908808-13908827 | MS.gene59485:intron | 45.0% | |
| CAAAACACGAACACCCTTTC+CGG | - | chr5.4:13905254-13905273 | None:intergenic | 45.0% | |
| CAATGGAAGAGGAAAGAGCT+AGG | + | chr5.4:13907090-13907109 | MS.gene59485:CDS | 45.0% | |
| CAGCTGGAACATGAACGATA+TGG | - | chr5.4:13906786-13906805 | None:intergenic | 45.0% | |
| CATATCGTTCATGTTCCAGC+TGG | + | chr5.4:13906784-13906803 | MS.gene59485:CDS | 45.0% | |
| CTATAGAGAAGGGAAAGCCA+TGG | + | chr5.4:13909316-13909335 | MS.gene59485:intron | 45.0% | |
| CTTAAGGCAAGAGCCAATTC+AGG | - | chr5.4:13907065-13907084 | None:intergenic | 45.0% | |
| GAGAAAGAGGCAATGATGAC+AGG | - | chr5.4:13907979-13907998 | None:intergenic | 45.0% | |
| GATCATATCAGGCGAGAAAG+AGG | - | chr5.4:13907992-13908011 | None:intergenic | 45.0% | |
| GATGCTGCCAAACAAGAGAA+AGG | + | chr5.4:13907143-13907162 | MS.gene59485:CDS | 45.0% | |
| GCAACAGTTTCTAAGCTGAC+TGG | - | chr5.4:13907929-13907948 | None:intergenic | 45.0% | |
| GCACTATACCGCTATAGCTT+CGG | - | chr5.4:13906181-13906200 | None:intergenic | 45.0% | |
| GCCAATTCAGGATCCAAGTT+TGG | - | chr5.4:13907053-13907072 | None:intergenic | 45.0% | |
| GCTATAGCTTCGGCAGAATT+TGG | - | chr5.4:13906171-13906190 | None:intergenic | 45.0% | |
| GCTTGAGCTTGAAATCGAGA+AGG | - | chr5.4:13904807-13904826 | None:intergenic | 45.0% | |
| GGGTAGATTGAAATCGAGAG+GGG | - | chr5.4:13904681-13904700 | None:intergenic | 45.0% | |
| GGTAGATTGAAATCGAGAGG+GGG | - | chr5.4:13904680-13904699 | None:intergenic | 45.0% | |
| GTATGTCCCACCACTTTATG+TGG | - | chr5.4:13908818-13908837 | None:intergenic | 45.0% | |
| GTCAGACGTGACTAGATTGT+TGG | + | chr5.4:13909431-13909450 | MS.gene59485:CDS | 45.0% | |
| TAATTCCTTTGGCAGCTTCC+CGG | + | chr5.4:13909557-13909576 | MS.gene59485:intron | 45.0% | |
| TCAAAAGCCACTAAATGGCC+AGG | - | chr5.4:13909861-13909880 | None:intergenic | 45.0% | |
| TCCTGCACACATAAGTACAG+AGG | - | chr5.4:13909050-13909069 | None:intergenic | 45.0% | |
| TGAAGCAAAGACTGAGAAGC+TGG | + | chr5.4:13906723-13906742 | MS.gene59485:CDS | 45.0% | |
| TGAGCCTCCTTTCTCTTGTT+TGG | - | chr5.4:13907153-13907172 | None:intergenic | 45.0% | |
| TGGAACCCACATAAAGTGGT+GGG | + | chr5.4:13908809-13908828 | MS.gene59485:intron | 45.0% | |
| TGGTATTCAGGTGGCACAAT+TGG | + | chr5.4:13906461-13906480 | MS.gene59485:CDS | 45.0% | |
| TTACATCATGGCCAACTGCA+GGG | - | chr5.4:13908198-13908217 | None:intergenic | 45.0% | |
| ! | ACACCAATTTTCACTGGCGA+TGG | + | chr5.4:13906948-13906967 | MS.gene59485:CDS | 45.0% |
| ! | ACCAATTTTCACTGGCGATG+GGG | + | chr5.4:13906950-13906969 | MS.gene59485:CDS | 45.0% |
| ! | ATCGAGGCACTTCTCATTGA+TGG | - | chr5.4:13908516-13908535 | None:intergenic | 45.0% |
| ! | CACAACACAGCTCCTTTTTG+AGG | + | chr5.4:13908425-13908444 | MS.gene59485:intron | 45.0% |
| ! | CACCAATTTTCACTGGCGAT+GGG | + | chr5.4:13906949-13906968 | MS.gene59485:CDS | 45.0% |
| ! | GAAAACAAGGGTGGCATTGA+TGG | + | chr5.4:13905473-13905492 | MS.gene59485:intron | 45.0% |
| !! | TGCTTCAGAAGTTGATGCAC+TGG | - | chr5.4:13907201-13907220 | None:intergenic | 45.0% |
| !! | TGTCAGTAGCGGATAGTACA+GGG | + | chr5.4:13909394-13909413 | MS.gene59485:CDS | 45.0% |
| !! | TTGTCAGTAGCGGATAGTAC+AGG | + | chr5.4:13909393-13909412 | MS.gene59485:CDS | 45.0% |
| !! | TATGAAAATAATAATTAAAA+AGG | - | chr5.4:13907698-13907717 | None:intergenic | 5.0% |
| !!! | TTTGAAATAATATATATTAT+AGG | + | chr5.4:13907627-13907646 | MS.gene59485:intron | 5.0% |
| AATTCCTTTGGCAGCTTCCC+GGG | + | chr5.4:13909558-13909577 | MS.gene59485:intron | 50.0% | |
| ACAAGATGCGGCAATGACTG+AGG | + | chr5.4:13907172-13907191 | MS.gene59485:CDS | 50.0% | |
| CAAGATGCGGCAATGACTGA+GGG | + | chr5.4:13907173-13907192 | MS.gene59485:CDS | 50.0% | |
| CTGAAAGGAGGTGATCTACC+AGG | - | chr5.4:13907588-13907607 | None:intergenic | 50.0% | |
| CTTACATCATGGCCAACTGC+AGG | - | chr5.4:13908199-13908218 | None:intergenic | 50.0% | |
| GAAAGGAGGCTCACAAGATG+CGG | + | chr5.4:13907160-13907179 | MS.gene59485:CDS | 50.0% | |
| GAACCTAGCTGCTGGTATTC+AGG | + | chr5.4:13906449-13906468 | MS.gene59485:CDS | 50.0% | |
| GCAAGCGCTTGCAATGTCAA+TGG | + | chr5.4:13908168-13908187 | MS.gene59485:CDS | 50.0% | |
| GCAGGAAGCTGCAGCAAAAA+AGG | + | chr5.4:13907112-13907131 | MS.gene59485:CDS | 50.0% | |
| GCTGCCAAACAAGAGAAAGG+AGG | + | chr5.4:13907146-13907165 | MS.gene59485:CDS | 50.0% | |
| GGGTCATTTATGTCAACCCC+GGG | - | chr5.4:13909578-13909597 | None:intergenic | 50.0% | |
| GTCACACCTACAAGCGATCT+AGG | + | chr5.4:13905274-13905293 | MS.gene59485:CDS | 50.0% | |
| TAGAGAAGGGAAAGCCATGG+TGG | + | chr5.4:13909319-13909338 | MS.gene59485:intron | 50.0% | |
| TCAATGGATGACCCTGCAGT+TGG | + | chr5.4:13908184-13908203 | MS.gene59485:CDS | 50.0% | |
| TCCCCATCGCCAGTGAAAAT+TGG | - | chr5.4:13906954-13906973 | None:intergenic | 50.0% | |
| TTGTTTGGCAGCATCCTCTG+CGG | - | chr5.4:13907138-13907157 | None:intergenic | 50.0% | |
| ! | ATTTTCACTGGCGATGGGGA+AGG | + | chr5.4:13906954-13906973 | MS.gene59485:CDS | 50.0% |
| !! | GAAAGAGCATTTGGACCAGC+TGG | - | chr5.4:13906802-13906821 | None:intergenic | 50.0% |
| !! | GTCAGTAGCGGATAGTACAG+GGG | + | chr5.4:13909395-13909414 | MS.gene59485:CDS | 50.0% |
| !!! | CGGAAAGGGTGTTCGTGTTT+TGG | + | chr5.4:13905252-13905271 | MS.gene59485:CDS | 50.0% |
| AGCGGATAGTACAGGGGATC+AGG | + | chr5.4:13909401-13909420 | MS.gene59485:CDS | 55.0% | |
| ATCTCACCTAGTGCCAGCTC+AGG | - | chr5.4:13908256-13908275 | None:intergenic | 55.0% | |
| ATCTGCAGATGACCCTGAGC+TGG | + | chr5.4:13908240-13908259 | MS.gene59485:CDS | 55.0% | |
| ATTCCTTTGGCAGCTTCCCG+GGG | + | chr5.4:13909559-13909578 | MS.gene59485:intron | 55.0% | |
| CCACCTGAATACCAGCAGCT+AGG | - | chr5.4:13906455-13906474 | None:intergenic | 55.0% | |
| CCTAGCTGCTGGTATTCAGG+TGG | + | chr5.4:13906452-13906471 | MS.gene59485:CDS | 55.0% | |
| GGAAGAGGAAAGAGCTAGGC+AGG | + | chr5.4:13907094-13907113 | MS.gene59485:CDS | 55.0% | |
| GGTGAGATGAACCTAGCTGC+TGG | + | chr5.4:13906441-13906460 | MS.gene59485:CDS | 55.0% | |
| TCTCACCTAGTGCCAGCTCA+GGG | - | chr5.4:13908255-13908274 | None:intergenic | 55.0% | |
| TGCAGCAAAAAAGGCCGCAG+AGG | + | chr5.4:13907121-13907140 | MS.gene59485:CDS | 55.0% | |
| ! | CATTTGCGGTGCCAAGACTC+AGG | + | chr5.4:13904842-13904861 | MS.gene59485:CDS | 55.0% |
| ! | TGCAAGCGCTTGCTGCAGTA+GGG | - | chr5.4:13908161-13908180 | None:intergenic | 55.0% |
| ! | TTGCAAGCGCTTGCTGCAGT+AGG | - | chr5.4:13908162-13908181 | None:intergenic | 55.0% |
| GATGACCCTGAGCTGGCACT+AGG | + | chr5.4:13908247-13908266 | MS.gene59485:CDS | 60.0% | |
| TTCACTGGCGATGGGGAAGG+TGG | + | chr5.4:13906957-13906976 | MS.gene59485:CDS | 60.0% | |
| AGCTGCAGCTGCAGCTGCAG+CGG | - | chr5.4:13906997-13907016 | None:intergenic | 65.0% | |
| CAACCCCGGGAAGCTGCCAA+AGG | - | chr5.4:13909565-13909584 | None:intergenic | 65.0% | |
| CTGCAGCTGCAGCTGCAGCT+GGG | + | chr5.4:13906997-13907016 | MS.gene59485:CDS | 65.0% | |
| GGCGATGGGGAAGGTGGAAG+CGG | + | chr5.4:13906963-13906982 | MS.gene59485:CDS | 65.0% | |
| TGCAGCTGCAGCTGCAGCTG+GGG | + | chr5.4:13906998-13907017 | MS.gene59485:CDS | 65.0% | |
| GCAGCTGCAGCTGCAGCTGG+GGG | + | chr5.4:13906999-13907018 | MS.gene59485:CDS | 70.0% | |
| GCTGCAGCTGCAGCTGCAGC+TGG | + | chr5.4:13906996-13907015 | MS.gene59485:CDS | 70.0% | |
| GCTGCAGCTGGGGGTGGAAC+TGG | + | chr5.4:13907008-13907027 | MS.gene59485:CDS | 70.0% | |
| TGCAGCTGCAGCTGCAGCGG+CGG | - | chr5.4:13906994-13907013 | None:intergenic | 70.0% | |
| GCTGCAGCTGCAGCTGGGGG+TGG | + | chr5.4:13907002-13907021 | MS.gene59485:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 13904649 | 13910282 | 13904649 | ID=MS.gene59485 |
| chr5.4 | mRNA | 13904649 | 13910282 | 13904649 | ID=MS.gene59485.t1;Parent=MS.gene59485 |
| chr5.4 | exon | 13904649 | 13904660 | 13904649 | ID=MS.gene59485.t1.exon1;Parent=MS.gene59485.t1 |
| chr5.4 | CDS | 13904649 | 13904660 | 13904649 | ID=cds.MS.gene59485.t1;Parent=MS.gene59485.t1 |
| chr5.4 | exon | 13904750 | 13904863 | 13904750 | ID=MS.gene59485.t1.exon2;Parent=MS.gene59485.t1 |
| chr5.4 | CDS | 13904750 | 13904863 | 13904750 | ID=cds.MS.gene59485.t1;Parent=MS.gene59485.t1 |
| chr5.4 | exon | 13905214 | 13905319 | 13905214 | ID=MS.gene59485.t1.exon3;Parent=MS.gene59485.t1 |
| chr5.4 | CDS | 13905214 | 13905319 | 13905214 | ID=cds.MS.gene59485.t1;Parent=MS.gene59485.t1 |
| chr5.4 | exon | 13906427 | 13906541 | 13906427 | ID=MS.gene59485.t1.exon4;Parent=MS.gene59485.t1 |
| chr5.4 | CDS | 13906427 | 13906541 | 13906427 | ID=cds.MS.gene59485.t1;Parent=MS.gene59485.t1 |
| chr5.4 | exon | 13906627 | 13906836 | 13906627 | ID=MS.gene59485.t1.exon5;Parent=MS.gene59485.t1 |
| chr5.4 | CDS | 13906627 | 13906836 | 13906627 | ID=cds.MS.gene59485.t1;Parent=MS.gene59485.t1 |
| chr5.4 | exon | 13906947 | 13907244 | 13906947 | ID=MS.gene59485.t1.exon6;Parent=MS.gene59485.t1 |
| chr5.4 | CDS | 13906947 | 13907244 | 13906947 | ID=cds.MS.gene59485.t1;Parent=MS.gene59485.t1 |
| chr5.4 | exon | 13908145 | 13908268 | 13908145 | ID=MS.gene59485.t1.exon7;Parent=MS.gene59485.t1 |
| chr5.4 | CDS | 13908145 | 13908268 | 13908145 | ID=cds.MS.gene59485.t1;Parent=MS.gene59485.t1 |
| chr5.4 | exon | 13909385 | 13909488 | 13909385 | ID=MS.gene59485.t1.exon8;Parent=MS.gene59485.t1 |
| chr5.4 | CDS | 13909385 | 13909488 | 13909385 | ID=cds.MS.gene59485.t1;Parent=MS.gene59485.t1 |
| chr5.4 | exon | 13909572 | 13909640 | 13909572 | ID=MS.gene59485.t1.exon9;Parent=MS.gene59485.t1 |
| chr5.4 | CDS | 13909572 | 13909640 | 13909572 | ID=cds.MS.gene59485.t1;Parent=MS.gene59485.t1 |
| chr5.4 | exon | 13910238 | 13910282 | 13910238 | ID=MS.gene59485.t1.exon10;Parent=MS.gene59485.t1 |
| chr5.4 | CDS | 13910238 | 13910282 | 13910238 | ID=cds.MS.gene59485.t1;Parent=MS.gene59485.t1 |
| Gene Sequence |
| Protein sequence |
