Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006712.t1 | XP_003607617.1 | 100 | 91 | 0 | 0 | 1 | 91 | 1 | 91 | 1.70E-43 | 184.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006712.t1 | Q9M1Z3 | 87.9 | 91 | 11 | 0 | 1 | 91 | 1 | 91 | 7.4e-40 | 164.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006712.t1 | G7JCP5 | 100.0 | 91 | 0 | 0 | 1 | 91 | 1 | 91 | 1.2e-43 | 184.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006712.t1 | MTR_4g080300 | 100.000 | 91 | 0 | 0 | 1 | 91 | 1 | 91 | 1.49e-63 | 187 |
| MS.gene006712.t1 | MTR_4g128050 | 45.455 | 66 | 36 | 0 | 15 | 80 | 8 | 73 | 1.69e-17 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006712.t1 | AT3G59810 | 87.912 | 91 | 11 | 0 | 1 | 91 | 1 | 91 | 4.20e-55 | 166 |
| MS.gene006712.t1 | AT3G59810 | 87.912 | 91 | 11 | 0 | 1 | 91 | 1 | 91 | 4.20e-55 | 166 |
| MS.gene006712.t1 | AT3G59810 | 87.912 | 91 | 11 | 0 | 1 | 91 | 1 | 91 | 4.20e-55 | 166 |
| MS.gene006712.t1 | AT2G43810 | 85.714 | 91 | 13 | 0 | 1 | 91 | 1 | 91 | 1.73e-54 | 164 |
| MS.gene006712.t1 | AT2G43810 | 85.714 | 91 | 13 | 0 | 1 | 91 | 1 | 91 | 1.73e-54 | 164 |
| MS.gene006712.t1 | AT2G43810 | 85.714 | 91 | 13 | 0 | 1 | 91 | 1 | 91 | 1.73e-54 | 164 |
| MS.gene006712.t1 | AT4G30220 | 48.485 | 66 | 34 | 0 | 15 | 80 | 8 | 73 | 1.33e-18 | 73.6 |
| MS.gene006712.t1 | AT4G30220 | 48.485 | 66 | 34 | 0 | 15 | 80 | 16 | 81 | 1.89e-18 | 73.2 |
| MS.gene006712.t1 | AT2G14285 | 50.000 | 46 | 23 | 0 | 35 | 80 | 1 | 46 | 3.76e-11 | 53.9 |
Find 27 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTATCCTAGCTTGTCTAGA+TGG | 0.292896 | 4.1:-26095419 | MS.gene006712:CDS |
| GAGGAAATCAGCTGGAGTTT+TGG | 0.321197 | 4.1:+26097809 | None:intergenic |
| CAAACAGAGGAGTATGTTAA+TGG | 0.355057 | 4.1:-26095374 | MS.gene006712:CDS |
| TTCTGCTAGAGTCCTCTTTG+AGG | 0.400676 | 4.1:+26095198 | None:intergenic |
| GCATTCATTCGAGGGAATAA+TGG | 0.408713 | 4.1:-26095326 | MS.gene006712:intron |
| GGAACAGAGAAAAGTGGTTC+AGG | 0.419839 | 4.1:-26097837 | MS.gene006712:CDS |
| GGACAGCTGAAGAACAAGTA+TGG | 0.438644 | 4.1:-26095353 | MS.gene006712:CDS |
| GTCTACCACGAATGGATTTG+AGG | 0.510106 | 4.1:+26097790 | None:intergenic |
| GATTTCCTCAAATCCATTCG+TGG | 0.535672 | 4.1:-26097795 | MS.gene006712:CDS |
| GTATCCTAGCTTGTCTAGAT+GGG | 0.549331 | 4.1:-26095418 | MS.gene006712:CDS |
| AACCACAGGTCTACCACGAA+TGG | 0.553624 | 4.1:+26097782 | None:intergenic |
| ATGGATTTGAGGAAATCAGC+TGG | 0.557310 | 4.1:+26097801 | None:intergenic |
| TATGGTGATGCATTCATTCG+AGG | 0.561710 | 4.1:-26095335 | MS.gene006712:CDS |
| CAAAGAGGACTCTAGCAGAA+GGG | 0.565739 | 4.1:-26095195 | MS.gene006712:CDS |
| TTTAGATTGTAAAAGATGAG+TGG | 0.566691 | 4.1:-26097858 | None:intergenic |
| TGTACATCAGTACCTCAAAG+AGG | 0.584586 | 4.1:-26095210 | MS.gene006712:CDS |
| GAGTTGAGCTTAACAACCAC+AGG | 0.590065 | 4.1:+26097768 | None:intergenic |
| TATACCCATCTAGACAAGCT+AGG | 0.590930 | 4.1:+26095414 | None:intergenic |
| ATGAGTGGAACAGAGAAAAG+TGG | 0.591203 | 4.1:-26097843 | MS.gene006712:CDS |
| GTGGTTGTTAAGCTCAACTC+TGG | 0.591462 | 4.1:-26097765 | MS.gene006712:CDS |
| TGGGTATATGAATATTGCAA+TGG | 0.592472 | 4.1:-26095399 | MS.gene006712:CDS |
| AAAGAGGACTCTAGCAGAAG+GGG | 0.600102 | 4.1:-26095194 | MS.gene006712:CDS |
| TCAAAGAGGACTCTAGCAGA+AGG | 0.600306 | 4.1:-26095196 | MS.gene006712:CDS |
| ATGGTGATGCATTCATTCGA+GGG | 0.615726 | 4.1:-26095334 | MS.gene006712:CDS |
| TATTGCAATGGAACAAACAG+AGG | 0.640288 | 4.1:-26095387 | MS.gene006712:CDS |
| AACTCTGGTGTTGACTATCG+AGG | 0.640691 | 4.1:-26097750 | MS.gene006712:intron |
| ATCCATTCGTGGTAGACCTG+TGG | 0.642884 | 4.1:-26097784 | MS.gene006712:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATTTATTTATTTATTT+CGG | - | chr4.1:26097051-26097070 | MS.gene006712:intron | 0.0% |
| !! | CATAATATAACAAATATAGA+TGG | + | chr4.1:26096765-26096784 | None:intergenic | 15.0% |
| !! | TATTCATTTAGTTATTCAAT+AGG | - | chr4.1:26096229-26096248 | MS.gene006712:intron | 15.0% |
| !!! | ACTCATTTTTTTTTTAATTC+TGG | - | chr4.1:26096014-26096033 | MS.gene006712:intron | 15.0% |
| !!! | GTGATTTTTTTTTTTAAACT+TGG | - | chr4.1:26095531-26095550 | MS.gene006712:intron | 15.0% |
| !!! | TTTTTTTTTTAAACTTGGTA+TGG | - | chr4.1:26095536-26095555 | MS.gene006712:intron | 15.0% |
| !! | GATATCTGAATAAGAAATTA+CGG | + | chr4.1:26095444-26095463 | None:intergenic | 20.0% |
| !! | GTAACTAATCTTATAGTTAT+TGG | - | chr4.1:26097261-26097280 | MS.gene006712:intron | 20.0% |
| !! | TAACTTTAAATTAGACAGAA+AGG | + | chr4.1:26097015-26097034 | None:intergenic | 20.0% |
| !! | TCTTAGTTTACATTATTTGA+AGG | - | chr4.1:26095462-26095481 | MS.gene006712:intron | 20.0% |
| ! | AAACAATTTGTCCATTCAAT+TGG | - | chr4.1:26096796-26096815 | MS.gene006712:intron | 25.0% |
| ! | AGTTTGGTTATATCACTTAT+TGG | - | chr4.1:26097497-26097516 | MS.gene006712:intron | 25.0% |
| ! | ATAGGAGTAGAAATTGAAAT+AGG | - | chr4.1:26096247-26096266 | MS.gene006712:intron | 25.0% |
| ! | ATGAAAGAAAACAGAGAAAT+CGG | + | chr4.1:26095309-26095328 | None:intergenic | 25.0% |
| ! | ATTCACAATAAAAAACCACA+AGG | + | chr4.1:26095728-26095747 | None:intergenic | 25.0% |
| ! | GAAAAAGTTTAGTTGGATTT+GGG | - | chr4.1:26096634-26096653 | MS.gene006712:intron | 25.0% |
| ! | GTTACATTATACTTCTATCT+AGG | - | chr4.1:26097551-26097570 | MS.gene006712:intron | 25.0% |
| ! | TAAGAGACAAATAGTAAGAA+AGG | - | chr4.1:26096148-26096167 | MS.gene006712:intron | 25.0% |
| ! | TAGTAAAAATTGAGTACACT+AGG | - | chr4.1:26096500-26096519 | MS.gene006712:intron | 25.0% |
| ! | TAGTTTACATTATTTGAAGG+CGG | - | chr4.1:26095465-26095484 | MS.gene006712:intron | 25.0% |
| ! | TTCACAATAAAAAACCACAA+GGG | + | chr4.1:26095727-26095746 | None:intergenic | 25.0% |
| ! | TTTACTTTCTCTGTCTAATT+TGG | - | chr4.1:26095974-26095993 | MS.gene006712:intron | 25.0% |
| ! | TTTGGTTAAATGAAAAGAGA+TGG | - | chr4.1:26095850-26095869 | MS.gene006712:intron | 25.0% |
| !! | AAAGAATAGAGGTTCTAATT+TGG | - | chr4.1:26095912-26095931 | MS.gene006712:intron | 25.0% |
| !! | AAATTAGGCTCAATTGTTTT+TGG | - | chr4.1:26097579-26097598 | MS.gene006712:intron | 25.0% |
| !! | AGATTAGTTACATAAGATAC+AGG | + | chr4.1:26097252-26097271 | None:intergenic | 25.0% |
| !! | ATTTGGAGTTATTATGAGAT+TGG | - | chr4.1:26095929-26095948 | MS.gene006712:intron | 25.0% |
| !! | ATTTTCCATTCTATGGTTTT+AGG | - | chr4.1:26095331-26095350 | MS.gene006712:CDS | 25.0% |
| !! | TTCATCAATTTTCCATTCTA+TGG | - | chr4.1:26095324-26095343 | MS.gene006712:intron | 25.0% |
| !!! | ATAATGCATTGATTGTTTCT+TGG | - | chr4.1:26097452-26097471 | MS.gene006712:intron | 25.0% |
| !!! | TGGATTTTGAATTCAAGTTT+AGG | - | chr4.1:26095369-26095388 | MS.gene006712:CDS | 25.0% |
| AAATGAAAAGAGATGGAATG+TGG | - | chr4.1:26095857-26095876 | MS.gene006712:intron | 30.0% | |
| AAGAAAAAGTTAGGTTTGAC+TGG | - | chr4.1:26096274-26096293 | MS.gene006712:intron | 30.0% | |
| AAGTTGAAATACAAGGGAAA+GGG | - | chr4.1:26097294-26097313 | MS.gene006712:intron | 30.0% | |
| AATGGAAAGAGATGGAATAT+GGG | - | chr4.1:26096901-26096920 | MS.gene006712:intron | 30.0% | |
| ACAAGAGACAAATAGTAAGA+AGG | - | chr4.1:26097180-26097199 | MS.gene006712:intron | 30.0% | |
| AGAAAAAGTTAGGTTTGACT+GGG | - | chr4.1:26096275-26096294 | MS.gene006712:intron | 30.0% | |
| AGAGTAGAAGTTGAAATACA+AGG | - | chr4.1:26097287-26097306 | MS.gene006712:intron | 30.0% | |
| AGTTTACATTATTTGAAGGC+GGG | - | chr4.1:26095466-26095485 | MS.gene006712:intron | 30.0% | |
| ATAGGAGGAAAGAAAAAGTT+AGG | - | chr4.1:26096265-26096284 | MS.gene006712:intron | 30.0% | |
| ATTAACCTCTGTTACTAGTT+TGG | - | chr4.1:26097481-26097500 | MS.gene006712:intron | 30.0% | |
| CGAAAAAGTTTAGTTGGATT+TGG | - | chr4.1:26096633-26096652 | MS.gene006712:intron | 30.0% | |
| GAGTAGAAGTTGAAATACAA+GGG | - | chr4.1:26097288-26097307 | MS.gene006712:intron | 30.0% | |
| GTAACTGATCGTTTAGTTAT+TGG | - | chr4.1:26096559-26096578 | MS.gene006712:intron | 30.0% | |
| GTACATCAATACCAATTGAA+TGG | + | chr4.1:26096810-26096829 | None:intergenic | 30.0% | |
| TAAAAATTGAGTACACTAGG+AGG | - | chr4.1:26096503-26096522 | MS.gene006712:intron | 30.0% | |
| TAATGGAAAGAGATGGAATA+TGG | - | chr4.1:26096900-26096919 | MS.gene006712:intron | 30.0% | |
| TAATTTGGCATAGTAGGATT+CGG | - | chr4.1:26095644-26095663 | MS.gene006712:intron | 30.0% | |
| TATAACCAAACTAGTAACAG+AGG | + | chr4.1:26097489-26097508 | None:intergenic | 30.0% | |
| TCACAATAAAAAACCACAAG+GGG | + | chr4.1:26095726-26095745 | None:intergenic | 30.0% | |
| TCAGAAAAGGCTATAATGTT+TGG | - | chr4.1:26095832-26095851 | MS.gene006712:intron | 30.0% | |
| TCTATCTAGGTACACAAATT+AGG | - | chr4.1:26097564-26097583 | MS.gene006712:intron | 30.0% | |
| TGGGTATATGAATATTGCAA+TGG | - | chr4.1:26097633-26097652 | MS.gene006712:intron | 30.0% | |
| TTAGTGAACACAAGTTTCAT+TGG | + | chr4.1:26096855-26096874 | None:intergenic | 30.0% | |
| ! | GGCTATAATGTTTGGTTTAA+TGG | - | chr4.1:26096883-26096902 | MS.gene006712:intron | 30.0% |
| ! | TAGAACCTCTATTCTTTTCA+TGG | + | chr4.1:26095909-26095928 | None:intergenic | 30.0% |
| ! | TCTTTTCAATTGCTCAACAT+GGG | + | chr4.1:26097127-26097146 | None:intergenic | 30.0% |
| ! | TTCTTTTCAATTGCTCAACA+TGG | + | chr4.1:26097128-26097147 | None:intergenic | 30.0% |
| ! | TTTGGTTTAATGGAAAGAGA+TGG | - | chr4.1:26096893-26096912 | MS.gene006712:intron | 30.0% |
| !! | TCTCTTCAACTATTTCTACA+CGG | + | chr4.1:26097079-26097098 | None:intergenic | 30.0% |
| !! | TTTTGTTTGTCCAAAGCAAA+AGG | + | chr4.1:26095798-26095817 | None:intergenic | 30.0% |
| !!! | TTGTTTTTGGTTAATCTTGC+AGG | - | chr4.1:26097592-26097611 | MS.gene006712:intron | 30.0% |
| ACCAATATGTGATACTACTC+TGG | + | chr4.1:26096376-26096395 | None:intergenic | 35.0% | |
| ACCAGAGTAGTATCACATAT+TGG | - | chr4.1:26096372-26096391 | MS.gene006712:intron | 35.0% | |
| ACCATTTCATCTTCAACCAT+GGG | - | chr4.1:26096340-26096359 | MS.gene006712:intron | 35.0% | |
| AGTAGAGCTTGAAAGAAACT+TGG | - | chr4.1:26097322-26097341 | MS.gene006712:intron | 35.0% | |
| AGTGACCTAAAACCATAGAA+TGG | + | chr4.1:26095339-26095358 | None:intergenic | 35.0% | |
| ATCACTTCATCTAACACCAT+TGG | - | chr4.1:26097400-26097419 | MS.gene006712:intron | 35.0% | |
| ATCACTTCATCTTCTACCAT+TGG | - | chr4.1:26096698-26096717 | MS.gene006712:intron | 35.0% | |
| CCTACTATGCCAAATTATGT+GGG | + | chr4.1:26095641-26095660 | None:intergenic | 35.0% | |
| CTAAGAGTAAAAGCTGGAAT+AGG | - | chr4.1:26096582-26096601 | MS.gene006712:intron | 35.0% | |
| GAAAAAGTTAGGTTTGACTG+GGG | - | chr4.1:26096276-26096295 | MS.gene006712:intron | 35.0% | |
| GAAGTTGAAATACAAGGGAA+AGG | - | chr4.1:26097293-26097312 | MS.gene006712:intron | 35.0% | |
| GAGGAACGAAAAAGTTTAGT+TGG | - | chr4.1:26096627-26096646 | MS.gene006712:intron | 35.0% | |
| GGAGTAGAAATTGAAATAGG+AGG | - | chr4.1:26096250-26096269 | MS.gene006712:intron | 35.0% | |
| GGTTATATCACTTATTGGTG+TGG | - | chr4.1:26097502-26097521 | MS.gene006712:intron | 35.0% | |
| GTAGAGCTTGAAAGAAACTT+GGG | - | chr4.1:26097323-26097342 | MS.gene006712:intron | 35.0% | |
| GTAGTATCACATATTGGTGT+AGG | - | chr4.1:26096378-26096397 | MS.gene006712:intron | 35.0% | |
| TACACTAGGAGAAATAAGCA+TGG | - | chr4.1:26096173-26096192 | MS.gene006712:intron | 35.0% | |
| TACCATTTCATCTTCAACCA+TGG | - | chr4.1:26096339-26096358 | MS.gene006712:intron | 35.0% | |
| TAGAGCCATGAAAAGAATAG+AGG | - | chr4.1:26095901-26095920 | MS.gene006712:intron | 35.0% | |
| TATCACTTATTGGTGTGGAT+TGG | - | chr4.1:26097507-26097526 | MS.gene006712:intron | 35.0% | |
| TATTGCAATGGAACAAACAG+AGG | - | chr4.1:26097645-26097664 | MS.gene006712:intron | 35.0% | |
| TCCTACTATGCCAAATTATG+TGG | + | chr4.1:26095642-26095661 | None:intergenic | 35.0% | |
| TTGGGTTCACTAATCAGAAA+AGG | - | chr4.1:26095819-26095838 | MS.gene006712:intron | 35.0% | |
| TTTAAACTTGGTATGGTCCA+AGG | - | chr4.1:26095543-26095562 | MS.gene006712:intron | 35.0% | |
| ! | AAGTTTAGGTTCACATTCCT+AGG | - | chr4.1:26095383-26095402 | MS.gene006712:CDS | 35.0% |
| ! | CAAACAGAGGAGTATGTTAA+TGG | - | chr4.1:26097658-26097677 | MS.gene006712:intron | 35.0% |
| ! | CTTTTCAACTGCTAAAAGCA+GGG | + | chr4.1:26096090-26096109 | None:intergenic | 35.0% |
| ! | CTTTTCAATTGCTCAACATG+GGG | + | chr4.1:26097126-26097145 | None:intergenic | 35.0% |
| ! | GCTTTGGACAAACAAAACTT+GGG | - | chr4.1:26095801-26095820 | MS.gene006712:intron | 35.0% |
| ! | TAGTAAGAAAGGAGTACACT+AGG | - | chr4.1:26096159-26096178 | MS.gene006712:intron | 35.0% |
| ! | TATTGGCTAAGAGTAAAAGC+TGG | - | chr4.1:26096576-26096595 | MS.gene006712:intron | 35.0% |
| ! | TCTTTTCAACTGCTAAAAGC+AGG | + | chr4.1:26096091-26096110 | None:intergenic | 35.0% |
| ! | TGCTTTGGACAAACAAAACT+TGG | - | chr4.1:26095800-26095819 | MS.gene006712:intron | 35.0% |
| ! | TTCGGACAAGAGAATTTTAG+AGG | - | chr4.1:26095662-26095681 | MS.gene006712:intron | 35.0% |
| !! | AAAGAAACTTGGGTTGGATT+GGG | - | chr4.1:26097333-26097352 | MS.gene006712:intron | 35.0% |
| !! | ACAAGTTGCACTTTTTGCTT+TGG | - | chr4.1:26096828-26096847 | MS.gene006712:intron | 35.0% |
| !! | CAAGTTGCACTTTTTGCTTT+GGG | - | chr4.1:26096829-26096848 | MS.gene006712:intron | 35.0% |
| !! | TTAGGTCACTTTGGAATTTG+TGG | - | chr4.1:26095349-26095368 | MS.gene006712:CDS | 35.0% |
| !!! | TCTATGGTTTTAGGTCACTT+TGG | - | chr4.1:26095340-26095359 | MS.gene006712:CDS | 35.0% |
| AAGCTGGAATAGGAAGGAAA+TGG | - | chr4.1:26096592-26096611 | MS.gene006712:intron | 40.0% | |
| AGCTAAAAATGTTGCACCAG+AGG | + | chr4.1:26096450-26096469 | None:intergenic | 40.0% | |
| AGCTGGAATAGGAAGGAAAT+GGG | - | chr4.1:26096593-26096612 | MS.gene006712:intron | 40.0% | |
| AGCTTGAAAGAAACTTGGGT+TGG | - | chr4.1:26097327-26097346 | MS.gene006712:intron | 40.0% | |
| ATCACAGAATAGCTACGGAA+AGG | - | chr4.1:26096423-26096442 | MS.gene006712:intron | 40.0% | |
| ATGAGTGGAACAGAGAAAAG+TGG | - | chr4.1:26095189-26095208 | MS.gene006712:CDS | 40.0% | |
| ATGGATTTGAGGAAATCAGC+TGG | + | chr4.1:26095234-26095253 | None:intergenic | 40.0% | |
| ATGTGATACTACTCTGGTCA+AGG | + | chr4.1:26096370-26096389 | None:intergenic | 40.0% | |
| ATTGAGTACACTAGGAGGAA+TGG | - | chr4.1:26096508-26096527 | MS.gene006712:intron | 40.0% | |
| CCAAACATTATAGCCATTGC+TGG | + | chr4.1:26096878-26096897 | None:intergenic | 40.0% | |
| CCAGCAATGGCTATAATGTT+TGG | - | chr4.1:26096875-26096894 | MS.gene006712:intron | 40.0% | |
| CCCACATAATTTGGCATAGT+AGG | - | chr4.1:26095638-26095657 | MS.gene006712:intron | 40.0% | |
| CGATCAAATTACTGTGACCT+AGG | + | chr4.1:26095403-26095422 | None:intergenic | 40.0% | |
| CTGCAATCACAGAATAGCTA+CGG | - | chr4.1:26096418-26096437 | MS.gene006712:intron | 40.0% | |
| CTTTGTTCAAGGAGATCCAA+TGG | + | chr4.1:26097419-26097438 | None:intergenic | 40.0% | |
| GAGAAATAAGCATGGAACAG+AGG | - | chr4.1:26096181-26096200 | MS.gene006712:intron | 40.0% | |
| GAGTAAAAGCTGGAATAGGA+AGG | - | chr4.1:26096586-26096605 | MS.gene006712:intron | 40.0% | |
| GATTTCCTCAAATCCATTCG+TGG | - | chr4.1:26095237-26095256 | MS.gene006712:intron | 40.0% | |
| GCACATCGACACTAATTGAA+TGG | + | chr4.1:26095766-26095785 | None:intergenic | 40.0% | |
| GCATTCATTCGAGGGAATAA+TGG | - | chr4.1:26097706-26097725 | MS.gene006712:intron | 40.0% | |
| GTGATATTAGTGATCCTCCA+TGG | + | chr4.1:26096683-26096702 | None:intergenic | 40.0% | |
| TAAGAAGGTAGTAGTACGCT+AGG | - | chr4.1:26097195-26097214 | MS.gene006712:intron | 40.0% | |
| TATACCCATCTAGACAAGCT+AGG | + | chr4.1:26097621-26097640 | None:intergenic | 40.0% | |
| TCCCATGGTTGAAGATGAAA+TGG | + | chr4.1:26096344-26096363 | None:intergenic | 40.0% | |
| TGAAAAGAGATGGAATGTGG+TGG | - | chr4.1:26095860-26095879 | MS.gene006712:intron | 40.0% | |
| TGTACATCAGTACCTCAAAG+AGG | - | chr4.1:26097822-26097841 | MS.gene006712:CDS | 40.0% | |
| TTGGATCTCCTTGAACAAAG+TGG | - | chr4.1:26097419-26097438 | MS.gene006712:intron | 40.0% | |
| TTGGATTTGGGAGATCATCA+GGG | - | chr4.1:26096646-26096665 | MS.gene006712:intron | 40.0% | |
| TTGTGTTCACTAACCAGCAA+TGG | - | chr4.1:26096862-26096881 | MS.gene006712:intron | 40.0% | |
| ! | ATGGTGATGCATTCATTCGA+GGG | - | chr4.1:26097698-26097717 | MS.gene006712:intron | 40.0% |
| ! | CATGGTTACACCTTTTGCTT+TGG | - | chr4.1:26095785-26095804 | MS.gene006712:intron | 40.0% |
| ! | GTATCCTAGCTTGTCTAGAT+GGG | - | chr4.1:26097614-26097633 | MS.gene006712:intron | 40.0% |
| ! | TATGGTGATGCATTCATTCG+AGG | - | chr4.1:26097697-26097716 | MS.gene006712:intron | 40.0% |
| !! | AAGAAACTTGGGTTGGATTG+GGG | - | chr4.1:26097334-26097353 | MS.gene006712:intron | 40.0% |
| !! | ATGGACTAGCCCACATAATT+TGG | - | chr4.1:26095629-26095648 | MS.gene006712:intron | 40.0% |
| !! | GAAAGAAACTTGGGTTGGAT+TGG | - | chr4.1:26097332-26097351 | MS.gene006712:intron | 40.0% |
| !! | TCAATTAGTGTCGATGTGCA+TGG | - | chr4.1:26095767-26095786 | MS.gene006712:intron | 40.0% |
| !! | TTTTAGAGGAGCACACTCTA+AGG | - | chr4.1:26095676-26095695 | MS.gene006712:intron | 40.0% |
| AAAGAGGACTCTAGCAGAAG+GGG | - | chr4.1:26097838-26097857 | MS.gene006712:CDS | 45.0% | |
| AAGGAAATGGGGTATAGTGG+AGG | - | chr4.1:26096605-26096624 | MS.gene006712:intron | 45.0% | |
| AGCCAAAGCTAAGCTCTGTA+TGG | - | chr4.1:26095610-26095629 | MS.gene006712:intron | 45.0% | |
| AGGAAGGAAATGGGGTATAG+TGG | - | chr4.1:26096602-26096621 | MS.gene006712:intron | 45.0% | |
| ATGGTATGAGTCATCGTCCA+AGG | + | chr4.1:26096325-26096344 | None:intergenic | 45.0% | |
| CAAAGAGGACTCTAGCAGAA+GGG | - | chr4.1:26097837-26097856 | MS.gene006712:CDS | 45.0% | |
| CAGAGCTACCACTTTGTTCA+AGG | + | chr4.1:26097430-26097449 | None:intergenic | 45.0% | |
| CTCTGGTCAAGGAAATCCAA+TGG | + | chr4.1:26096717-26096736 | None:intergenic | 45.0% | |
| CTTGAACAAAGTGGTAGCTC+TGG | - | chr4.1:26097428-26097447 | MS.gene006712:intron | 45.0% | |
| GAGTTGAGCTTAACAACCAC+AGG | + | chr4.1:26095267-26095286 | None:intergenic | 45.0% | |
| GCTATTCTGTGATTGCAGCA+TGG | + | chr4.1:26096416-26096435 | None:intergenic | 45.0% | |
| GCTGGAATAGGAAGGAAATG+GGG | - | chr4.1:26096594-26096613 | MS.gene006712:intron | 45.0% | |
| GGAACAGAGAAAAGTGGTTC+AGG | - | chr4.1:26095195-26095214 | MS.gene006712:CDS | 45.0% | |
| GGACAGCTGAAGAACAAGTA+TGG | - | chr4.1:26097679-26097698 | MS.gene006712:intron | 45.0% | |
| GTCCATACAGAGCTTAGCTT+TGG | + | chr4.1:26095615-26095634 | None:intergenic | 45.0% | |
| GTGGTTGTTAAGCTCAACTC+TGG | - | chr4.1:26095267-26095286 | MS.gene006712:intron | 45.0% | |
| GTTGGATTTGGGAGATCATC+AGG | - | chr4.1:26096645-26096664 | MS.gene006712:intron | 45.0% | |
| TCAAAGAGGACTCTAGCAGA+AGG | - | chr4.1:26097836-26097855 | MS.gene006712:CDS | 45.0% | |
| TTCTGCTAGAGTCCTCTTTG+AGG | + | chr4.1:26097837-26097856 | None:intergenic | 45.0% | |
| TTGGATTTCCTTGACCAGAG+TGG | - | chr4.1:26096717-26096736 | MS.gene006712:intron | 45.0% | |
| ! | CTTTAATTTCCCCTGGACAG+TGG | + | chr4.1:26095592-26095611 | None:intergenic | 45.0% |
| ! | GAGGAAATCAGCTGGAGTTT+TGG | + | chr4.1:26095226-26095245 | None:intergenic | 45.0% |
| ! | GGTATCCTAGCTTGTCTAGA+TGG | - | chr4.1:26097613-26097632 | MS.gene006712:intron | 45.0% |
| ! | GTCTACCACGAATGGATTTG+AGG | + | chr4.1:26095245-26095264 | None:intergenic | 45.0% |
| !! | AACTCTGGTGTTGACTATCG+AGG | - | chr4.1:26095282-26095301 | MS.gene006712:intron | 45.0% |
| !! | CATTATTTGAAGGCGGGTTG+TGG | - | chr4.1:26095472-26095491 | MS.gene006712:intron | 45.0% |
| !! | GCTTTGGCTTTAATTTCCCC+TGG | + | chr4.1:26095599-26095618 | None:intergenic | 45.0% |
| !! | TTGGATTGGGGAGAGTATCA+GGG | - | chr4.1:26097346-26097365 | MS.gene006712:intron | 45.0% |
| AACCACAGGTCTACCACGAA+TGG | + | chr4.1:26095253-26095272 | None:intergenic | 50.0% | |
| AAGGGGTTGCCTGATTGTGT+AGG | + | chr4.1:26095709-26095728 | None:intergenic | 50.0% | |
| AGTTAGGTTTGACTGGGGAG+AGG | - | chr4.1:26096281-26096300 | MS.gene006712:intron | 50.0% | |
| ATAGCTACGGAAAGGACCTC+TGG | - | chr4.1:26096431-26096450 | MS.gene006712:intron | 50.0% | |
| ATCCATTCGTGGTAGACCTG+TGG | - | chr4.1:26095248-26095267 | MS.gene006712:intron | 50.0% | |
| CACTAGGAGGAATGGCACAT+AGG | - | chr4.1:26096516-26096535 | MS.gene006712:intron | 50.0% | |
| GAATTGGTCCCCGGATAAGT+CGG | + | chr4.1:26095570-26095589 | None:intergenic | 50.0% | |
| GATAAGAGTCACCCTCTCCA+AGG | + | chr4.1:26097383-26097402 | None:intergenic | 50.0% | |
| GGTTCCTAGCCTACACAATC+AGG | - | chr4.1:26095697-26095716 | MS.gene006712:intron | 50.0% | |
| GTTGCCTGATTGTGTAGGCT+AGG | + | chr4.1:26095704-26095723 | None:intergenic | 50.0% | |
| TAGAGCTACCACTCTGGTCA+AGG | + | chr4.1:26096728-26096747 | None:intergenic | 50.0% | |
| TCAGGGTCTCTCAAACACCT+TGG | - | chr4.1:26096305-26096324 | MS.gene006712:intron | 50.0% | |
| TCAGGGTCTCTTGAACACCA+TGG | - | chr4.1:26096663-26096682 | MS.gene006712:intron | 50.0% | |
| TCCCTCTAACACCTTGGAGA+GGG | - | chr4.1:26097369-26097388 | MS.gene006712:intron | 50.0% | |
| TTTCCCCTGGACAGTGGAAT+TGG | + | chr4.1:26095586-26095605 | None:intergenic | 50.0% | |
| TTTGACTGGGGAGAGGATCA+GGG | - | chr4.1:26096288-26096307 | MS.gene006712:intron | 50.0% | |
| ! | ACCCTCTCCAAGGTGTTAGA+GGG | + | chr4.1:26097373-26097392 | None:intergenic | 50.0% |
| ! | GAAATGGGGTATAGTGGAGG+AGG | - | chr4.1:26096608-26096627 | MS.gene006712:intron | 50.0% |
| !! | ACCAGAGTGGTAGCTCTAGA+AGG | - | chr4.1:26096730-26096749 | MS.gene006712:intron | 50.0% |
| !! | ACCTTCTAGAGCTACCACTC+TGG | + | chr4.1:26096734-26096753 | None:intergenic | 50.0% |
| !! | GTTGGATTGGGGAGAGTATC+AGG | - | chr4.1:26097345-26097364 | MS.gene006712:intron | 50.0% |
| CACAATCAGGCAACCCCTTG+TGG | - | chr4.1:26095710-26095729 | MS.gene006712:intron | 55.0% | |
| CTCTGGTCAAGGAGATCCCA+TGG | + | chr4.1:26096359-26096378 | None:intergenic | 55.0% | |
| GGACCAATTCCACTGTCCAG+GGG | - | chr4.1:26095580-26095599 | MS.gene006712:intron | 55.0% | |
| GGGACCAATTCCACTGTCCA+GGG | - | chr4.1:26095579-26095598 | MS.gene006712:intron | 55.0% | |
| GGGTCTCTTGAACACCATGG+AGG | - | chr4.1:26096666-26096685 | MS.gene006712:intron | 55.0% | |
| GTCCCTCTAACACCTTGGAG+AGG | - | chr4.1:26097368-26097387 | MS.gene006712:intron | 55.0% | |
| GTTTGACTGGGGAGAGGATC+AGG | - | chr4.1:26096287-26096306 | MS.gene006712:intron | 55.0% | |
| TCAGGGTCCCTCTAACACCT+TGG | - | chr4.1:26097363-26097382 | MS.gene006712:intron | 55.0% | |
| TGGACAGTGGAATTGGTCCC+CGG | + | chr4.1:26095579-26095598 | None:intergenic | 55.0% | |
| ! | CACCCTCTCCAAGGTGTTAG+AGG | + | chr4.1:26097374-26097393 | None:intergenic | 55.0% |
| ! | GGTCCAAGGACCGACTTATC+CGG | - | chr4.1:26095557-26095576 | MS.gene006712:intron | 55.0% |
| ! | GTCCAAGGACCGACTTATCC+GGG | - | chr4.1:26095558-26095577 | MS.gene006712:intron | 55.0% |
| ! | TCCAAGGACCGACTTATCCG+GGG | - | chr4.1:26095559-26095578 | MS.gene006712:intron | 55.0% |
| GGGGACCAATTCCACTGTCC+AGG | - | chr4.1:26095578-26095597 | MS.gene006712:intron | 60.0% | |
| TCCCCGGATAAGTCGGTCCT+TGG | + | chr4.1:26095563-26095582 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 26095189 | 26097865 | 26095189 | ID=MS.gene006712 |
| chr4.1 | mRNA | 26095189 | 26097865 | 26095189 | ID=MS.gene006712.t1;Parent=MS.gene006712 |
| chr4.1 | exon | 26097751 | 26097865 | 26097751 | ID=MS.gene006712.t1.exon1;Parent=MS.gene006712.t1 |
| chr4.1 | CDS | 26097751 | 26097865 | 26097751 | ID=cds.MS.gene006712.t1;Parent=MS.gene006712.t1 |
| chr4.1 | exon | 26095327 | 26095440 | 26095327 | ID=MS.gene006712.t1.exon2;Parent=MS.gene006712.t1 |
| chr4.1 | CDS | 26095327 | 26095440 | 26095327 | ID=cds.MS.gene006712.t1;Parent=MS.gene006712.t1 |
| chr4.1 | exon | 26095189 | 26095235 | 26095189 | ID=MS.gene006712.t1.exon3;Parent=MS.gene006712.t1 |
| chr4.1 | CDS | 26095189 | 26095235 | 26095189 | ID=cds.MS.gene006712.t1;Parent=MS.gene006712.t1 |
| Gene Sequence |
| Protein sequence |
