Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07810.t1 | RHN39333.1 | 99.6 | 673 | 3 | 0 | 1 | 673 | 1 | 673 | 0.00E+00 | 1208 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07810.t1 | Q9C6I8 | 79.6 | 675 | 132 | 2 | 1 | 673 | 1 | 671 | 3.9e-279 | 961.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07810.t1 | A0A396GF36 | 99.6 | 673 | 3 | 0 | 1 | 673 | 1 | 673 | 0.0e+00 | 1208.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053148 | MS.gene07810 | 0.817166 | 3.80E-52 | -1.69E-46 |
| MS.gene053443 | MS.gene07810 | 0.803676 | 3.11E-49 | -1.69E-46 |
| MS.gene056075 | MS.gene07810 | 0.821235 | 4.50E-53 | -1.69E-46 |
| MS.gene058030 | MS.gene07810 | 0.806258 | 8.98E-50 | -1.69E-46 |
| MS.gene059726 | MS.gene07810 | 0.808361 | 3.22E-50 | -1.69E-46 |
| MS.gene060638 | MS.gene07810 | 0.813588 | 2.37E-51 | -1.69E-46 |
| MS.gene060763 | MS.gene07810 | 0.81822 | 2.20E-52 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07810.t1 | MTR_8g018150 | 99.406 | 673 | 4 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1378 |
| MS.gene07810.t1 | MTR_2g078050 | 95.542 | 673 | 7 | 1 | 1 | 673 | 1 | 650 | 0.0 | 1314 |
| MS.gene07810.t1 | MTR_2g078050 | 98.696 | 537 | 7 | 0 | 137 | 673 | 1 | 537 | 0.0 | 1087 |
| MS.gene07810.t1 | MTR_7g450930 | 28.387 | 310 | 195 | 5 | 62 | 361 | 49 | 341 | 6.34e-32 | 127 |
| MS.gene07810.t1 | MTR_7g450930 | 28.387 | 310 | 195 | 5 | 62 | 361 | 136 | 428 | 6.11e-31 | 126 |
| MS.gene07810.t1 | MTR_7g450930 | 28.179 | 291 | 182 | 5 | 62 | 342 | 136 | 409 | 1.71e-29 | 122 |
| MS.gene07810.t1 | MTR_2g082240 | 62.500 | 112 | 36 | 3 | 566 | 673 | 39 | 148 | 1.15e-28 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07810.t1 | AT1G50920 | 77.286 | 678 | 142 | 5 | 1 | 673 | 1 | 671 | 0.0 | 1071 |
| MS.gene07810.t1 | AT1G10300 | 70.294 | 680 | 173 | 6 | 1 | 673 | 30 | 687 | 0.0 | 929 |
| MS.gene07810.t1 | AT1G10300 | 70.294 | 680 | 173 | 6 | 1 | 673 | 30 | 687 | 0.0 | 929 |
| MS.gene07810.t1 | AT1G10300 | 70.294 | 680 | 173 | 6 | 1 | 673 | 1 | 658 | 0.0 | 928 |
| MS.gene07810.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 76 | 362 | 1.69e-30 | 125 |
| MS.gene07810.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 69 | 355 | 3.07e-30 | 124 |
| MS.gene07810.t1 | AT1G80770 | 28.448 | 232 | 166 | 0 | 62 | 293 | 51 | 282 | 3.98e-30 | 122 |
| MS.gene07810.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 92 | 378 | 4.16e-30 | 124 |
| MS.gene07810.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 107 | 393 | 1.01e-29 | 123 |
| MS.gene07810.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 123 | 409 | 2.32e-29 | 122 |
| MS.gene07810.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 6 | 184 | 4.59e-20 | 90.1 |
| MS.gene07810.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 7.34e-20 | 89.7 |
| MS.gene07810.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 7.34e-20 | 89.7 |
Find 0 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACGGATTATAAGTATTTA+AGG | + | 55985:1049-1068 | MS.gene07810:CDS | 20.0% |
| !!! | TATGTTAAGTTGCTTAAATA+TGG | + | 55985:760-779 | MS.gene07810:CDS | 20.0% |
| !!! | TTTTATCAACAAGATTACTA+GGG | + | 55985:972-991 | MS.gene07810:CDS | 20.0% |
| ! | AAGCAACTTAACATAATCTT+TGG | - | 55985:755-774 | None:intergenic | 25.0% |
| ! | ATAATGCTTTCTCAAATTCA+TGG | - | 55985:1703-1722 | None:intergenic | 25.0% |
| !! | CTTTTATCAACAAGATTACT+AGG | + | 55985:971-990 | MS.gene07810:CDS | 25.0% |
| !!! | CTTTTCATGAAAATTAGTCT+GGG | - | 55985:587-606 | None:intergenic | 25.0% |
| !!! | TTTGAGAAAGCATTATATTC+TGG | + | 55985:1707-1726 | MS.gene07810:CDS | 25.0% |
| AAAGCAATTAAACTTGCGAA+GGG | + | 55985:2302-2321 | MS.gene07810:CDS | 30.0% | |
| AATACTGCTAGGAATCTTAT+TGG | + | 55985:721-740 | MS.gene07810:CDS | 30.0% | |
| ATAATATTCCGATCCTCAAA+CGG | - | 55985:1111-1130 | None:intergenic | 30.0% | |
| ATCAAAATAGTCCTGGTATT+TGG | - | 55985:922-941 | None:intergenic | 30.0% | |
| ATTCTGTTAATAGCCATAGA+AGG | - | 55985:2083-2102 | None:intergenic | 30.0% | |
| GTATTCTAATCCAACAACAT+CGG | + | 55985:1946-1965 | MS.gene07810:CDS | 30.0% | |
| TGTTCTTCTTGGATATATCA+GGG | + | 55985:1178-1197 | MS.gene07810:CDS | 30.0% | |
| TTGTTCTTCTTGGATATATC+AGG | + | 55985:1177-1196 | MS.gene07810:CDS | 30.0% | |
| ! | AATACAAGTGCTTTGGTTTA+AGG | - | 55985:2388-2407 | None:intergenic | 30.0% |
| ! | AGATAATCTGCCAGAAATTT+TGG | + | 55985:1749-1768 | MS.gene07810:CDS | 30.0% |
| ! | GCTTTTCATGAAAATTAGTC+TGG | - | 55985:588-607 | None:intergenic | 30.0% |
| ! | TCAACGAAATCTTTTCCATT+TGG | - | 55985:463-482 | None:intergenic | 30.0% |
| ! | TCTTTTTAATCCGATGTTGT+TGG | - | 55985:1959-1978 | None:intergenic | 30.0% |
| !!! | GATGATGATTTTGAGATAGA+TGG | + | 55985:1867-1886 | MS.gene07810:CDS | 30.0% |
| ATCAAGTCATTGATACACCT+GGG | + | 55985:1073-1092 | MS.gene07810:CDS | 35.0% | |
| CAAAGCAATTAAACTTGCGA+AGG | + | 55985:2301-2320 | MS.gene07810:CDS | 35.0% | |
| CAGTTCACAACAGAAAGAAT+GGG | + | 55985:2029-2048 | MS.gene07810:CDS | 35.0% | |
| CTGGTATTTGGATCAATTGA+AGG | - | 55985:910-929 | None:intergenic | 35.0% | |
| CTTCAATTGATCCAAATACC+AGG | + | 55985:908-927 | MS.gene07810:CDS | 35.0% | |
| CTTGTCGAATTTCCTTGAAA+CGG | - | 55985:2003-2022 | None:intergenic | 35.0% | |
| GCTTCATGTGTTGTATAACA+AGG | + | 55985:669-688 | MS.gene07810:CDS | 35.0% | |
| TATCAAGTCATTGATACACC+TGG | + | 55985:1072-1091 | MS.gene07810:CDS | 35.0% | |
| TTGAAGACTTCAATTGGTCA+TGG | + | 55985:1366-1385 | MS.gene07810:CDS | 35.0% | |
| TTGGTCAGATTAATACTGCT+AGG | + | 55985:710-729 | MS.gene07810:CDS | 35.0% | |
| TTGTGACCATCCAAAATTTC+TGG | - | 55985:1762-1781 | None:intergenic | 35.0% | |
| TTGTTGCACACAACAATCAA+AGG | - | 55985:1273-1292 | None:intergenic | 35.0% | |
| TTTCCAGAATACAAGTGCTT+TGG | - | 55985:2395-2414 | None:intergenic | 35.0% | |
| ! | AAACCAAAGCACTTGTATTC+TGG | + | 55985:2389-2408 | MS.gene07810:CDS | 35.0% |
| ! | AATCTGCCAGAAATTTTGGA+TGG | + | 55985:1753-1772 | MS.gene07810:CDS | 35.0% |
| ! | ATATTCTGGCTGATGATGAA+TGG | + | 55985:1721-1740 | MS.gene07810:CDS | 35.0% |
| ! | ATCTTTTCCATTTGGTACGA+CGG | - | 55985:455-474 | None:intergenic | 35.0% |
| ! | CTTTTCGCATGTAGAATTGT+CGG | - | 55985:555-574 | None:intergenic | 35.0% |
| !!! | ACCAGGACTATTTTGATTTG+TGG | + | 55985:925-944 | MS.gene07810:CDS | 35.0% |
| !!! | CCAGGACTATTTTGATTTGT+GGG | + | 55985:926-945 | MS.gene07810:CDS | 35.0% |
| AAAAACTGAGAAGGATCTGG+AGG | + | 55985:1650-1669 | MS.gene07810:CDS | 40.0% | |
| AAAAGAACTCTTCCCGACAT+TGG | - | 55985:956-975 | None:intergenic | 40.0% | |
| AAAGAACTCTTCCCGACATT+GGG | - | 55985:955-974 | None:intergenic | 40.0% | |
| AAATCAACGACTGTCTGAAC+AGG | + | 55985:1520-1539 | MS.gene07810:CDS | 40.0% | |
| AAGACTTCAATTGGTCATGG+AGG | + | 55985:1369-1388 | MS.gene07810:CDS | 40.0% | |
| AAGAGTTGGAAAGAGAGGAA+GGG | + | 55985:1823-1842 | MS.gene07810:CDS | 40.0% | |
| AAGATTACCGTCGTACCAAA+TGG | + | 55985:445-464 | MS.gene07810:CDS | 40.0% | |
| AAGGATCTGGAGGAAGAAAA+TGG | + | 55985:1660-1679 | MS.gene07810:CDS | 40.0% | |
| ACCACTAAGTCGTTGTTTGT+GGG | + | 55985:1024-1043 | MS.gene07810:CDS | 40.0% | |
| AGATGGAACTGAATTGACAC+CGG | + | 55985:1884-1903 | MS.gene07810:CDS | 40.0% | |
| AGCGGCAATATTGTTCTTCT+TGG | + | 55985:1167-1186 | MS.gene07810:CDS | 40.0% | |
| ATCTGAGGAGGATATGAAGT+TGG | + | 55985:1320-1339 | MS.gene07810:CDS | 40.0% | |
| ATTTCCTTGAAACGGTTGGT+CGG | - | 55985:1995-2014 | None:intergenic | 40.0% | |
| ATTTGTGGGTATCCCAATGT+CGG | + | 55985:940-959 | MS.gene07810:CDS | 40.0% | |
| CCCACAAATCAAAATAGTCC+TGG | - | 55985:929-948 | None:intergenic | 40.0% | |
| CGTTTCAAGGAAATTCGACA+AGG | + | 55985:2001-2020 | MS.gene07810:CDS | 40.0% | |
| GACTTAGTGGTAAACGCATA+CGG | - | 55985:1015-1034 | None:intergenic | 40.0% | |
| GAGAAAAACTGAGAAGGATC+TGG | + | 55985:1647-1666 | MS.gene07810:CDS | 40.0% | |
| GATCATTACAAGCTTGCACT+TGG | + | 55985:691-710 | MS.gene07810:CDS | 40.0% | |
| GCAGTTCACAACAGAAAGAA+TGG | + | 55985:2028-2047 | MS.gene07810:CDS | 40.0% | |
| GGAGAAGAGAAAAACTGAGA+AGG | + | 55985:1641-1660 | MS.gene07810:CDS | 40.0% | |
| TACCACTAAGTCGTTGTTTG+TGG | + | 55985:1023-1042 | MS.gene07810:CDS | 40.0% | |
| TCACAACAGAAAGAATGGGA+AGG | + | 55985:2033-2052 | MS.gene07810:CDS | 40.0% | |
| TCATCTTAATCTCAACCCTC+TGG | - | 55985:1491-1510 | None:intergenic | 40.0% | |
| TCGAATTTCCTTGAAACGGT+TGG | - | 55985:1999-2018 | None:intergenic | 40.0% | |
| TGAAGCAGATCACCGTAAAA+AGG | - | 55985:655-674 | None:intergenic | 40.0% | |
| TGACCCTGACATTCTACATA+GGG | + | 55985:1797-1816 | MS.gene07810:CDS | 40.0% | |
| TGCATAGCCTTTGTGAACAA+CGG | - | 55985:521-540 | None:intergenic | 40.0% | |
| TGTACTGTGCTTAAGAGGAT+TGG | + | 55985:835-854 | MS.gene07810:CDS | 40.0% | |
| TTGACCCTGACATTCTACAT+AGG | + | 55985:1796-1815 | MS.gene07810:CDS | 40.0% | |
| TTGGATATATCAGGGTCTTG+TGG | + | 55985:1186-1205 | MS.gene07810:CDS | 40.0% | |
| ! | AAGAGGCTTTAGCTGAGATT+AGG | + | 55985:1913-1932 | MS.gene07810:CDS | 40.0% |
| ! | ACGAGGAAACTCATCGATTA+TGG | - | 55985:617-636 | None:intergenic | 40.0% |
| ! | AGTTTTTCTCTTCTCCTCAG+CGG | - | 55985:1637-1656 | None:intergenic | 40.0% |
| ! | ATACACCTGGGATTTTGGAT+AGG | + | 55985:1085-1104 | MS.gene07810:CDS | 40.0% |
| ! | CATTGATACACCTGGGATTT+TGG | + | 55985:1080-1099 | MS.gene07810:CDS | 40.0% |
| ! | CTTTAGCTTCCAAAACTGCT+GGG | - | 55985:1602-1621 | None:intergenic | 40.0% |
| ! | GGCATTCTTGTTTCTCTTCT+TGG | - | 55985:2333-2352 | None:intergenic | 40.0% |
| ! | GGGGACATTCATCCTTTTTA+CGG | + | 55985:640-659 | MS.gene07810:CDS | 40.0% |
| ! | TCTTTTGAGCAGAATCCCTA+AGG | - | 55985:2280-2299 | None:intergenic | 40.0% |
| ! | TGGATATATCAGGGTCTTGT+GGG | + | 55985:1187-1206 | MS.gene07810:CDS | 40.0% |
| ! | TTTAGCTTCCAAAACTGCTG+GGG | - | 55985:1601-1620 | None:intergenic | 40.0% |
| !! | GAAGCGTTGAAGACTTCAAT+TGG | + | 55985:1360-1379 | MS.gene07810:CDS | 40.0% |
| AAAACTGCTGGGGGAATACA+CGG | - | 55985:1591-1610 | None:intergenic | 45.0% | |
| ACACCAACCGTTGTTCACAA+AGG | + | 55985:511-530 | MS.gene07810:CDS | 45.0% | |
| ACCCACAAACAACGACTTAG+TGG | - | 55985:1028-1047 | None:intergenic | 45.0% | |
| AGAAACAAGAATGCCAAGCG+TGG | + | 55985:2338-2357 | MS.gene07810:CDS | 45.0% | |
| AGAAGGAAGAAACGATGGGA+TGG | + | 55985:2151-2170 | MS.gene07810:CDS | 45.0% | |
| AGCAGATCTGCATCTAGGAA+AGG | + | 55985:2107-2126 | MS.gene07810:CDS | 45.0% | |
| ATCCCATCGTTTCTTCCTTC+TGG | - | 55985:2152-2171 | None:intergenic | 45.0% | |
| ATCGATGAGTTTCCTCGTCT+TGG | + | 55985:619-638 | MS.gene07810:CDS | 45.0% | |
| ATCTAGGAAAGGTCGGAAGA+GGG | + | 55985:2118-2137 | MS.gene07810:CDS | 45.0% | |
| CAAGGAAATTCGACAAGGAC+AGG | + | 55985:2006-2025 | MS.gene07810:CDS | 45.0% | |
| CACCAGAAGGAAGAAACGAT+GGG | + | 55985:2147-2166 | MS.gene07810:CDS | 45.0% | |
| CATGAAGTTGTTCCTGGAGA+AGG | + | 55985:2254-2273 | MS.gene07810:CDS | 45.0% | |
| CCACCCTATGTAGAATGTCA+GGG | - | 55985:1803-1822 | None:intergenic | 45.0% | |
| GAAGAGTTGGAAAGAGAGGA+AGG | + | 55985:1822-1841 | MS.gene07810:CDS | 45.0% | |
| GATCTGCATCTAGGAAAGGT+CGG | + | 55985:2111-2130 | MS.gene07810:CDS | 45.0% | |
| GATCTGGAGGAAGAAAATGG+AGG | + | 55985:1663-1682 | MS.gene07810:CDS | 45.0% | |
| GGATGTGTACTGTGCTTAAG+AGG | + | 55985:830-849 | MS.gene07810:CDS | 45.0% | |
| GTATCGCTGTAAGTGCTTGA+AGG | + | 55985:792-811 | MS.gene07810:CDS | 45.0% | |
| GTCGTTGTTTGTGGGTCATA+CGG | + | 55985:1032-1051 | MS.gene07810:CDS | 45.0% | |
| TAAGAGGATTGGACCGAGTT+TGG | + | 55985:846-865 | MS.gene07810:CDS | 45.0% | |
| TAGCCTTTGTGAACAACGGT+TGG | - | 55985:517-536 | None:intergenic | 45.0% | |
| TCAATTGGTCATGGAGGTGA+GGG | + | 55985:1375-1394 | MS.gene07810:CDS | 45.0% | |
| TCACCAGAAGGAAGAAACGA+TGG | + | 55985:2146-2165 | MS.gene07810:CDS | 45.0% | |
| TCCACCCTATGTAGAATGTC+AGG | - | 55985:1804-1823 | None:intergenic | 45.0% | |
| TCCTCAGATAACCCATCCAA+CGG | - | 55985:1309-1328 | None:intergenic | 45.0% | |
| TCGATGAGTTTCCTCGTCTT+GGG | + | 55985:620-639 | MS.gene07810:CDS | 45.0% | |
| TCTACATAGGGTGGAAGAGT+TGG | + | 55985:1809-1828 | MS.gene07810:CDS | 45.0% | |
| TCTCCAGGAACAACTTCATG+TGG | - | 55985:2254-2273 | None:intergenic | 45.0% | |
| TCTTGGGCTTGATCCTTCTA+TGG | + | 55985:2067-2086 | MS.gene07810:CDS | 45.0% | |
| TGAGAGATTGCTGAACCAGA+GGG | + | 55985:1473-1492 | MS.gene07810:CDS | 45.0% | |
| TGCTCCAAATACGCCAAACT+CGG | - | 55985:862-881 | None:intergenic | 45.0% | |
| TGGAAAGAGAGGAAGGGTTA+AGG | + | 55985:1829-1848 | MS.gene07810:CDS | 45.0% | |
| TGGGTATACTATTGCTCAGC+AGG | + | 55985:1206-1225 | MS.gene07810:CDS | 45.0% | |
| TTAGCTTCCAAAACTGCTGG+GGG | - | 55985:1600-1619 | None:intergenic | 45.0% | |
| TTCAATTGGTCATGGAGGTG+AGG | + | 55985:1374-1393 | MS.gene07810:CDS | 45.0% | |
| TTTGTGGGTATCCCAATGTC+GGG | + | 55985:941-960 | MS.gene07810:CDS | 45.0% | |
| ! | AACGGTTGGTGTTTGACGTT+GGG | - | 55985:503-522 | None:intergenic | 45.0% |
| ! | AGGCTTTAGCTGAGATTAGG+AGG | + | 55985:1916-1935 | MS.gene07810:CDS | 45.0% |
| ! | GATTTTGGATAGGCCGTTTG+AGG | + | 55985:1095-1114 | MS.gene07810:CDS | 45.0% |
| ! | GCTTTAGCTTCCAAAACTGC+TGG | - | 55985:1603-1622 | None:intergenic | 45.0% |
| !! | ATGAGTGCGTTGACTGAAGA+AGG | + | 55985:1423-1442 | MS.gene07810:CDS | 45.0% |
| !! | TATTCTGGAAAGCGCTCCAA+AGG | + | 55985:2404-2423 | MS.gene07810:CDS | 45.0% |
| AACCACGTGACCAGAAGGAA+AGG | + | 55985:1562-1581 | MS.gene07810:CDS | 50.0% | |
| AACGGCCTATCCAAAATCCC+AGG | - | 55985:1093-1112 | None:intergenic | 50.0% | |
| AAGAGAGGAAGGGTTAAGGC+AGG | + | 55985:1833-1852 | MS.gene07810:CDS | 50.0% | |
| AAGAGGGAGAGATCACCAGA+AGG | + | 55985:2134-2153 | MS.gene07810:CDS | 50.0% | |
| AGGTTAGGCAGCATATGGCT+AGG | + | 55985:881-900 | MS.gene07810:CDS | 50.0% | |
| ATTGACACCGGAACAGCAAG+AGG | + | 55985:1896-1915 | MS.gene07810:CDS | 50.0% | |
| CAATTGGTCATGGAGGTGAG+GGG | + | 55985:1376-1395 | MS.gene07810:CDS | 50.0% | |
| CATCTAGGAAAGGTCGGAAG+AGG | + | 55985:2117-2136 | MS.gene07810:CDS | 50.0% | |
| CCACCACATGAAGTTGTTCC+TGG | + | 55985:2248-2267 | MS.gene07810:CDS | 50.0% | |
| CCAGGAACAACTTCATGTGG+TGG | - | 55985:2251-2270 | None:intergenic | 50.0% | |
| CCCTGACATTCTACATAGGG+TGG | + | 55985:1800-1819 | MS.gene07810:CDS | 50.0% | |
| CGATGAGTTTCCTCGTCTTG+GGG | + | 55985:621-640 | MS.gene07810:CDS | 50.0% | |
| CTGGTTCAGCAATCTCTCAC+AGG | - | 55985:1472-1491 | None:intergenic | 50.0% | |
| GCTCCAAAGGAAAGACAGAC+AGG | + | 55985:2417-2436 | MS.gene07810:CDS | 50.0% | |
| GCTTGAAGGTTGCTGCTCTT+GGG | + | 55985:806-825 | MS.gene07810:CDS | 50.0% | |
| GGTGGAAGAGTTGGAAAGAG+AGG | + | 55985:1818-1837 | MS.gene07810:CDS | 50.0% | |
| GTAGATCACTGTCTCGTTCC+AGG | + | 55985:2213-2232 | MS.gene07810:CDS | 50.0% | |
| GTGAGAGATTGCTGAACCAG+AGG | + | 55985:1472-1491 | MS.gene07810:CDS | 50.0% | |
| TCCTTCTGGTCACGTGGTTT+CGG | - | 55985:1561-1580 | None:intergenic | 50.0% | |
| TCTATCAGCTTCTCCACGCT+TGG | - | 55985:2354-2373 | None:intergenic | 50.0% | |
| TGCGTAGCAGATCTGCATCT+AGG | + | 55985:2102-2121 | MS.gene07810:CDS | 50.0% | |
| TGCTCTTGCGCATTTGAGAG+CGG | + | 55985:1149-1168 | MS.gene07810:CDS | 50.0% | |
| TGCTTGAAGGTTGCTGCTCT+TGG | + | 55985:805-824 | MS.gene07810:CDS | 50.0% | |
| TGGACCGAGTTTGGCGTATT+TGG | + | 55985:855-874 | MS.gene07810:CDS | 50.0% | |
| TGGATAGGCCGTTTGAGGAT+CGG | + | 55985:1100-1119 | MS.gene07810:CDS | 50.0% | |
| TGTTCCTGGAGAAGGCCTTA+GGG | + | 55985:2262-2281 | MS.gene07810:CDS | 50.0% | |
| TTGTTCCTGGAGAAGGCCTT+AGG | + | 55985:2261-2280 | MS.gene07810:CDS | 50.0% | |
| ! | CAACGGTTGGTGTTTGACGT+TGG | - | 55985:504-523 | None:intergenic | 50.0% |
| ! | CTGATTTGCAGCCGTTGGAT+GGG | + | 55985:1295-1314 | MS.gene07810:CDS | 50.0% |
| ! | GAGTTTGGCGTATTTGGAGC+AGG | + | 55985:861-880 | MS.gene07810:CDS | 50.0% |
| ! | GTGTATTCCCCCAGCAGTTT+TGG | + | 55985:1590-1609 | MS.gene07810:CDS | 50.0% |
| ! | TGGCGTATTTGGAGCAGGTT+AGG | + | 55985:866-885 | MS.gene07810:CDS | 50.0% |
| !! | ACTGATTTGCAGCCGTTGGA+TGG | + | 55985:1294-1313 | MS.gene07810:CDS | 50.0% |
| !! | CAAGACTGATTTGCAGCCGT+TGG | + | 55985:1290-1309 | MS.gene07810:CDS | 50.0% |
| !! | CTGAGACGCTGTTTCTTGCT+AGG | - | 55985:2194-2213 | None:intergenic | 50.0% |
| !! | GCTAAAGCCTCTTGCTGTTC+CGG | - | 55985:1906-1925 | None:intergenic | 50.0% |
| !! | GTTGGATGGGTTATCTGAGG+AGG | + | 55985:1308-1327 | MS.gene07810:CDS | 50.0% |
| AGAGCCGACCAACCGTTTCA+AGG | + | 55985:1988-2007 | MS.gene07810:CDS | 55.0% | |
| GAAGGCAGCTGTCGTCTCTT+GGG | + | 55985:2051-2070 | MS.gene07810:CDS | 55.0% | |
| GAATCCCTAAGGCCTTCTCC+AGG | - | 55985:2269-2288 | None:intergenic | 55.0% | |
| GCGCCTGTCTGTCTTTCCTT+TGG | - | 55985:2423-2442 | None:intergenic | 55.0% | |
| GGAGCAGGTTAGGCAGCATA+TGG | + | 55985:876-895 | MS.gene07810:CDS | 55.0% | |
| GGATGAATGTCCCCAAGACG+AGG | - | 55985:634-653 | None:intergenic | 55.0% | |
| TACACGGAGGCCTTTCCTTC+TGG | - | 55985:1575-1594 | None:intergenic | 55.0% | |
| TCCGAAACCACGTGACCAGA+AGG | + | 55985:1557-1576 | MS.gene07810:CDS | 55.0% | |
| TGAAGGTTGCTGCTCTTGGG+AGG | + | 55985:809-828 | MS.gene07810:CDS | 55.0% | |
| ! | GAGGAAGAAAATGGAGGCGC+TGG | + | 55985:1669-1688 | MS.gene07810:CDS | 55.0% |
| !! | GCCGTTGGATGGGTTATCTG+AGG | + | 55985:1305-1324 | MS.gene07810:CDS | 55.0% |
| ACTGCTGGGGGAATACACGG+AGG | - | 55985:1588-1607 | None:intergenic | 60.0% | |
| AGCTAAGCAAGCAGCCGCTG+AGG | + | 55985:1620-1639 | MS.gene07810:CDS | 60.0% | |
| GGAAGGCAGCTGTCGTCTCT+TGG | + | 55985:2050-2069 | MS.gene07810:CDS | 60.0% | |
| GGCCTTTCCTTCTGGTCACG+TGG | - | 55985:1567-1586 | None:intergenic | 60.0% | |
| TGGTCATGGAGGTGAGGGGA+CGG | + | 55985:1380-1399 | MS.gene07810:CDS | 60.0% | |
| TGGTGGTCGAGAGACTGACC+TGG | - | 55985:2234-2253 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 55985 | gene | 424 | 2445 | 424 | ID=MS.gene07810 |
| 55985 | mRNA | 424 | 2445 | 424 | ID=MS.gene07810.t1;Parent=MS.gene07810 |
| 55985 | exon | 424 | 2445 | 424 | ID=MS.gene07810.t1.exon1;Parent=MS.gene07810.t1 |
| 55985 | CDS | 424 | 2445 | 424 | ID=cds.MS.gene07810.t1;Parent=MS.gene07810.t1 |
| Gene Sequence |
| Protein sequence |
