Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07808.t1 | RHN39333.1 | 99.6 | 673 | 3 | 0 | 1 | 673 | 1 | 673 | 0.00E+00 | 1208 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07808.t1 | Q9C6I8 | 79.6 | 675 | 132 | 2 | 1 | 673 | 1 | 671 | 3.9e-279 | 961.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07808.t1 | A0A396GF36 | 99.6 | 673 | 3 | 0 | 1 | 673 | 1 | 673 | 0.0e+00 | 1208.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene07808 | 0.824839 | 6.50E-54 | -1.69E-46 |
| MS.gene050838 | MS.gene07808 | 0.829334 | 5.46E-55 | -1.69E-46 |
| MS.gene050945 | MS.gene07808 | 0.801435 | 9.02E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene07808 | 0.836471 | 9.18E-57 | -1.69E-46 |
| MS.gene051746 | MS.gene07808 | 0.816922 | 4.31E-52 | -1.69E-46 |
| MS.gene051850 | MS.gene07808 | 0.810183 | 1.31E-50 | -1.69E-46 |
| MS.gene05188 | MS.gene07808 | 0.814978 | 1.17E-51 | -1.69E-46 |
| MS.gene052947 | MS.gene07808 | 0.834436 | 3.00E-56 | -1.69E-46 |
| MS.gene053122 | MS.gene07808 | 0.801998 | 6.91E-49 | -1.69E-46 |
| MS.gene053443 | MS.gene07808 | 0.811389 | 7.18E-51 | -1.69E-46 |
| MS.gene054413 | MS.gene07808 | 0.800114 | 1.68E-48 | -1.69E-46 |
| MS.gene055765 | MS.gene07808 | 0.802812 | 4.70E-49 | -1.69E-46 |
| MS.gene056075 | MS.gene07808 | 0.845341 | 4.31E-59 | -1.69E-46 |
| MS.gene056403 | MS.gene07808 | 0.808244 | 3.41E-50 | -1.69E-46 |
| MS.gene056605 | MS.gene07808 | 0.818184 | 2.24E-52 | -1.69E-46 |
| MS.gene05689 | MS.gene07808 | 0.82533 | 4.97E-54 | -1.69E-46 |
| MS.gene057094 | MS.gene07808 | 0.840788 | 7.04E-58 | -1.69E-46 |
| MS.gene058030 | MS.gene07808 | 0.82165 | 3.61E-53 | -1.69E-46 |
| MS.gene058354 | MS.gene07808 | 0.805977 | 1.03E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene07808 | 0.822918 | 1.83E-53 | -1.69E-46 |
| MS.gene059726 | MS.gene07808 | 0.826269 | 2.98E-54 | -1.69E-46 |
| MS.gene06001 | MS.gene07808 | 0.810586 | 1.07E-50 | -1.69E-46 |
| MS.gene06011 | MS.gene07808 | 0.822806 | 1.95E-53 | -1.69E-46 |
| MS.gene060763 | MS.gene07808 | 0.876011 | 1.96E-68 | -1.69E-46 |
| MS.gene060830 | MS.gene07808 | 0.828565 | 8.38E-55 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07808.t1 | MTR_8g018150 | 99.406 | 673 | 4 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1378 |
| MS.gene07808.t1 | MTR_2g078050 | 95.542 | 673 | 7 | 1 | 1 | 673 | 1 | 650 | 0.0 | 1314 |
| MS.gene07808.t1 | MTR_2g078050 | 98.696 | 537 | 7 | 0 | 137 | 673 | 1 | 537 | 0.0 | 1087 |
| MS.gene07808.t1 | MTR_7g450930 | 28.387 | 310 | 195 | 5 | 62 | 361 | 49 | 341 | 6.34e-32 | 127 |
| MS.gene07808.t1 | MTR_7g450930 | 28.387 | 310 | 195 | 5 | 62 | 361 | 136 | 428 | 6.11e-31 | 126 |
| MS.gene07808.t1 | MTR_7g450930 | 28.179 | 291 | 182 | 5 | 62 | 342 | 136 | 409 | 1.71e-29 | 122 |
| MS.gene07808.t1 | MTR_2g082240 | 62.500 | 112 | 36 | 3 | 566 | 673 | 39 | 148 | 1.15e-28 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07808.t1 | AT1G50920 | 77.286 | 678 | 142 | 5 | 1 | 673 | 1 | 671 | 0.0 | 1071 |
| MS.gene07808.t1 | AT1G10300 | 70.294 | 680 | 173 | 6 | 1 | 673 | 30 | 687 | 0.0 | 929 |
| MS.gene07808.t1 | AT1G10300 | 70.294 | 680 | 173 | 6 | 1 | 673 | 30 | 687 | 0.0 | 929 |
| MS.gene07808.t1 | AT1G10300 | 70.294 | 680 | 173 | 6 | 1 | 673 | 1 | 658 | 0.0 | 928 |
| MS.gene07808.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 76 | 362 | 1.69e-30 | 125 |
| MS.gene07808.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 69 | 355 | 3.07e-30 | 124 |
| MS.gene07808.t1 | AT1G80770 | 28.448 | 232 | 166 | 0 | 62 | 293 | 51 | 282 | 3.98e-30 | 122 |
| MS.gene07808.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 92 | 378 | 4.16e-30 | 124 |
| MS.gene07808.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 107 | 393 | 1.01e-29 | 123 |
| MS.gene07808.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 123 | 409 | 2.32e-29 | 122 |
| MS.gene07808.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 6 | 184 | 4.59e-20 | 90.1 |
| MS.gene07808.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 7.34e-20 | 89.7 |
| MS.gene07808.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 7.34e-20 | 89.7 |
Find 158 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACAAGTGCTTTGGTTTA+AGG | 0.090617 | 8.3:+72421505 | None:intergenic |
| GGCATTCTTGTTTCTCTTCT+TGG | 0.114794 | 8.3:+72421560 | None:intergenic |
| CATTGATACACCTGGGATTT+TGG | 0.122171 | 8.3:-72422810 | MS.gene07808:CDS |
| AGATAATCTGCCAGAAATTT+TGG | 0.147637 | 8.3:-72422141 | MS.gene07808:CDS |
| ATCAAAATAGTCCTGGTATT+TGG | 0.197584 | 8.3:+72422971 | None:intergenic |
| TTGTTCTTCTTGGATATATC+AGG | 0.214420 | 8.3:-72422713 | MS.gene07808:CDS |
| ATACGGATTATAAGTATTTA+AGG | 0.228633 | 8.3:-72422841 | MS.gene07808:CDS |
| AAACCAAAGCACTTGTATTC+TGG | 0.228894 | 8.3:-72421501 | MS.gene07808:CDS |
| AATACTGCTAGGAATCTTAT+TGG | 0.238602 | 8.3:-72423169 | MS.gene07808:CDS |
| TGGACCGAGTTTGGCGTATT+TGG | 0.240694 | 8.3:-72423035 | MS.gene07808:CDS |
| TTGTGACCATCCAAAATTTC+TGG | 0.250913 | 8.3:+72422131 | None:intergenic |
| AAGCAACTTAACATAATCTT+TGG | 0.271321 | 8.3:+72423138 | None:intergenic |
| TCCTTCTGGTCACGTGGTTT+CGG | 0.274078 | 8.3:+72422332 | None:intergenic |
| AGCGGCAATATTGTTCTTCT+TGG | 0.291223 | 8.3:-72422723 | MS.gene07808:CDS |
| TACACGGAGGCCTTTCCTTC+TGG | 0.303728 | 8.3:+72422318 | None:intergenic |
| TATGTTAAGTTGCTTAAATA+TGG | 0.304848 | 8.3:-72423130 | MS.gene07808:CDS |
| ATAATGCTTTCTCAAATTCA+TGG | 0.310089 | 8.3:+72422190 | None:intergenic |
| TCTTGGGCTTGATCCTTCTA+TGG | 0.315254 | 8.3:-72421823 | MS.gene07808:CDS |
| ATCCCATCGTTTCTTCCTTC+TGG | 0.317491 | 8.3:+72421741 | None:intergenic |
| TGCTTGAAGGTTGCTGCTCT+TGG | 0.323045 | 8.3:-72423085 | MS.gene07808:CDS |
| TTTGAGAAAGCATTATATTC+TGG | 0.326466 | 8.3:-72422183 | MS.gene07808:CDS |
| GCTAAAGCCTCTTGCTGTTC+CGG | 0.334792 | 8.3:+72421987 | None:intergenic |
| GCGCCTGTCTGTCTTTCCTT+TGG | 0.337022 | 8.3:+72421470 | None:intergenic |
| GTAGATCACTGTCTCGTTCC+AGG | 0.337515 | 8.3:-72421677 | MS.gene07808:CDS |
| AAGGATCTGGAGGAAGAAAA+TGG | 0.337588 | 8.3:-72422230 | MS.gene07808:CDS |
| TGAAGCAGATCACCGTAAAA+AGG | 0.347243 | 8.3:+72423238 | None:intergenic |
| TAAGAGGATTGGACCGAGTT+TGG | 0.351236 | 8.3:-72423044 | MS.gene07808:CDS |
| TCGATGAGTTTCCTCGTCTT+GGG | 0.355491 | 8.3:-72423270 | MS.gene07808:CDS |
| GGAAGGCAGCTGTCGTCTCT+TGG | 0.361895 | 8.3:-72421840 | MS.gene07808:CDS |
| TTGTTCCTGGAGAAGGCCTT+AGG | 0.365376 | 8.3:-72421629 | MS.gene07808:CDS |
| ACGAGGAAACTCATCGATTA+TGG | 0.370750 | 8.3:+72423276 | None:intergenic |
| CCACCACATGAAGTTGTTCC+TGG | 0.371926 | 8.3:-72421642 | MS.gene07808:CDS |
| TGGATATATCAGGGTCTTGT+GGG | 0.379230 | 8.3:-72422703 | MS.gene07808:CDS |
| TCCACCCTATGTAGAATGTC+AGG | 0.383879 | 8.3:+72422089 | None:intergenic |
| TGGAAAGAGAGGAAGGGTTA+AGG | 0.386417 | 8.3:-72422061 | MS.gene07808:CDS |
| ATCGATGAGTTTCCTCGTCT+TGG | 0.401400 | 8.3:-72423271 | MS.gene07808:CDS |
| TACCACTAAGTCGTTGTTTG+TGG | 0.410993 | 8.3:-72422867 | MS.gene07808:CDS |
| AACGGTTGGTGTTTGACGTT+GGG | 0.415669 | 8.3:+72423390 | None:intergenic |
| GCTTGAAGGTTGCTGCTCTT+GGG | 0.424098 | 8.3:-72423084 | MS.gene07808:CDS |
| GCTTTAGCTTCCAAAACTGC+TGG | 0.426248 | 8.3:+72422290 | None:intergenic |
| TTGGATATATCAGGGTCTTG+TGG | 0.430521 | 8.3:-72422704 | MS.gene07808:CDS |
| TTTCCAGAATACAAGTGCTT+TGG | 0.430988 | 8.3:+72421498 | None:intergenic |
| AAGAGGCTTTAGCTGAGATT+AGG | 0.440739 | 8.3:-72421977 | MS.gene07808:CDS |
| TGGCGTATTTGGAGCAGGTT+AGG | 0.444195 | 8.3:-72423024 | MS.gene07808:CDS |
| AAAGAACTCTTCCCGACATT+GGG | 0.444776 | 8.3:+72422938 | None:intergenic |
| ACCCACAAACAACGACTTAG+TGG | 0.446803 | 8.3:+72422865 | None:intergenic |
| GTCGTTGTTTGTGGGTCATA+CGG | 0.447797 | 8.3:-72422858 | MS.gene07808:CDS |
| GAAGCGTTGAAGACTTCAAT+TGG | 0.448210 | 8.3:-72422530 | MS.gene07808:CDS |
| GAAGAGTTGGAAAGAGAGGA+AGG | 0.448886 | 8.3:-72422068 | MS.gene07808:CDS |
| GAAGGCAGCTGTCGTCTCTT+GGG | 0.448895 | 8.3:-72421839 | MS.gene07808:CDS |
| TGGGTATACTATTGCTCAGC+AGG | 0.456682 | 8.3:-72422684 | MS.gene07808:CDS |
| GCAGTTCACAACAGAAAGAA+TGG | 0.457219 | 8.3:-72421862 | MS.gene07808:CDS |
| GGAGCAGGTTAGGCAGCATA+TGG | 0.458049 | 8.3:-72423014 | MS.gene07808:CDS |
| AAATCAACGACTGTCTGAAC+AGG | 0.462069 | 8.3:-72422370 | MS.gene07808:CDS |
| GGTGGAAGAGTTGGAAAGAG+AGG | 0.462216 | 8.3:-72422072 | MS.gene07808:CDS |
| CTGAGACGCTGTTTCTTGCT+AGG | 0.462261 | 8.3:+72421699 | None:intergenic |
| GGATGTGTACTGTGCTTAAG+AGG | 0.463986 | 8.3:-72423060 | MS.gene07808:CDS |
| GTATCGCTGTAAGTGCTTGA+AGG | 0.470038 | 8.3:-72423098 | MS.gene07808:CDS |
| ATCTGAGGAGGATATGAAGT+TGG | 0.470979 | 8.3:-72422570 | MS.gene07808:CDS |
| TCGAATTTCCTTGAAACGGT+TGG | 0.471228 | 8.3:+72421894 | None:intergenic |
| AGAGCCGACCAACCGTTTCA+AGG | 0.471571 | 8.3:-72421902 | MS.gene07808:CDS |
| AAGATTACCGTCGTACCAAA+TGG | 0.472320 | 8.3:-72423445 | MS.gene07808:CDS |
| ATTCTGTTAATAGCCATAGA+AGG | 0.473599 | 8.3:+72421810 | None:intergenic |
| CAAGGAAATTCGACAAGGAC+AGG | 0.474490 | 8.3:-72421884 | MS.gene07808:CDS |
| CTTGTCGAATTTCCTTGAAA+CGG | 0.475481 | 8.3:+72421890 | None:intergenic |
| CTGGTATTTGGATCAATTGA+AGG | 0.475786 | 8.3:+72422983 | None:intergenic |
| ACTGATTTGCAGCCGTTGGA+TGG | 0.477148 | 8.3:-72422596 | MS.gene07808:CDS |
| AAAAGAACTCTTCCCGACAT+TGG | 0.486940 | 8.3:+72422937 | None:intergenic |
| CAAGACTGATTTGCAGCCGT+TGG | 0.487122 | 8.3:-72422600 | MS.gene07808:CDS |
| CTTTAGCTTCCAAAACTGCT+GGG | 0.494188 | 8.3:+72422291 | None:intergenic |
| GAGTTTGGCGTATTTGGAGC+AGG | 0.498174 | 8.3:-72423029 | MS.gene07808:CDS |
| ATAATATTCCGATCCTCAAA+CGG | 0.499586 | 8.3:+72422782 | None:intergenic |
| ACCACTAAGTCGTTGTTTGT+GGG | 0.504320 | 8.3:-72422866 | MS.gene07808:CDS |
| TGTTCCTGGAGAAGGCCTTA+GGG | 0.506108 | 8.3:-72421628 | MS.gene07808:CDS |
| TCTACATAGGGTGGAAGAGT+TGG | 0.506957 | 8.3:-72422081 | MS.gene07808:CDS |
| TCATCTTAATCTCAACCCTC+TGG | 0.510875 | 8.3:+72422402 | None:intergenic |
| TCTATCAGCTTCTCCACGCT+TGG | 0.514227 | 8.3:+72421539 | None:intergenic |
| TGGATAGGCCGTTTGAGGAT+CGG | 0.514877 | 8.3:-72422790 | MS.gene07808:CDS |
| TTTGTGGGTATCCCAATGTC+GGG | 0.518939 | 8.3:-72422949 | MS.gene07808:CDS |
| CTGATTTGCAGCCGTTGGAT+GGG | 0.521692 | 8.3:-72422595 | MS.gene07808:CDS |
| CATGAAGTTGTTCCTGGAGA+AGG | 0.522867 | 8.3:-72421636 | MS.gene07808:CDS |
| GAGGAAGAAAATGGAGGCGC+TGG | 0.523495 | 8.3:-72422221 | MS.gene07808:CDS |
| AGGCTTTAGCTGAGATTAGG+AGG | 0.525671 | 8.3:-72421974 | MS.gene07808:CDS |
| TGTACTGTGCTTAAGAGGAT+TGG | 0.532717 | 8.3:-72423055 | MS.gene07808:CDS |
| GATCATTACAAGCTTGCACT+TGG | 0.533978 | 8.3:-72423199 | MS.gene07808:CDS |
| TTGAAGACTTCAATTGGTCA+TGG | 0.534533 | 8.3:-72422524 | MS.gene07808:CDS |
| ATATTCTGGCTGATGATGAA+TGG | 0.535908 | 8.3:-72422169 | MS.gene07808:CDS |
| CATCTAGGAAAGGTCGGAAG+AGG | 0.537520 | 8.3:-72421773 | MS.gene07808:CDS |
| GGCCTTTCCTTCTGGTCACG+TGG | 0.537839 | 8.3:+72422326 | None:intergenic |
| CAGTTCACAACAGAAAGAAT+GGG | 0.538822 | 8.3:-72421861 | MS.gene07808:CDS |
| TGTTCTTCTTGGATATATCA+GGG | 0.539338 | 8.3:-72422712 | MS.gene07808:CDS |
| CTGGTTCAGCAATCTCTCAC+AGG | 0.539812 | 8.3:+72422421 | None:intergenic |
| ATTTGTGGGTATCCCAATGT+CGG | 0.540169 | 8.3:-72422950 | MS.gene07808:CDS |
| TGGTCATGGAGGTGAGGGGA+CGG | 0.540574 | 8.3:-72422510 | MS.gene07808:CDS |
| GCTCCAAAGGAAAGACAGAC+AGG | 0.543840 | 8.3:-72421473 | MS.gene07808:CDS |
| CAACGGTTGGTGTTTGACGT+TGG | 0.544383 | 8.3:+72423389 | None:intergenic |
| TTGACCCTGACATTCTACAT+AGG | 0.545444 | 8.3:-72422094 | MS.gene07808:CDS |
| TGAAGGTTGCTGCTCTTGGG+AGG | 0.546694 | 8.3:-72423081 | MS.gene07808:CDS |
| ATTTCCTTGAAACGGTTGGT+CGG | 0.548211 | 8.3:+72421898 | None:intergenic |
| GACTTAGTGGTAAACGCATA+CGG | 0.548539 | 8.3:+72422878 | None:intergenic |
| CCCACAAATCAAAATAGTCC+TGG | 0.549797 | 8.3:+72422964 | None:intergenic |
| GAATCCCTAAGGCCTTCTCC+AGG | 0.554177 | 8.3:+72421624 | None:intergenic |
| TATCAAGTCATTGATACACC+TGG | 0.555673 | 8.3:-72422818 | MS.gene07808:CDS |
| CAAAGCAATTAAACTTGCGA+AGG | 0.557324 | 8.3:-72421589 | MS.gene07808:CDS |
| TCAATTGGTCATGGAGGTGA+GGG | 0.557674 | 8.3:-72422515 | MS.gene07808:CDS |
| TGCATAGCCTTTGTGAACAA+CGG | 0.559637 | 8.3:+72423372 | None:intergenic |
| AAGAGAGGAAGGGTTAAGGC+AGG | 0.562461 | 8.3:-72422057 | MS.gene07808:CDS |
| TTCAATTGGTCATGGAGGTG+AGG | 0.562813 | 8.3:-72422516 | MS.gene07808:CDS |
| TGCTCCAAATACGCCAAACT+CGG | 0.563252 | 8.3:+72423031 | None:intergenic |
| ATGAGTGCGTTGACTGAAGA+AGG | 0.569510 | 8.3:-72422467 | MS.gene07808:CDS |
| AGCTAAGCAAGCAGCCGCTG+AGG | 0.574580 | 8.3:-72422270 | MS.gene07808:CDS |
| TTGTTGCACACAACAATCAA+AGG | 0.575746 | 8.3:+72422620 | None:intergenic |
| TGACCCTGACATTCTACATA+GGG | 0.576210 | 8.3:-72422093 | MS.gene07808:CDS |
| CGATGAGTTTCCTCGTCTTG+GGG | 0.576928 | 8.3:-72423269 | MS.gene07808:CDS |
| CTTCAATTGATCCAAATACC+AGG | 0.577769 | 8.3:-72422982 | MS.gene07808:CDS |
| TATTCTGGAAAGCGCTCCAA+AGG | 0.584874 | 8.3:-72421486 | MS.gene07808:CDS |
| TCCGAAACCACGTGACCAGA+AGG | 0.588470 | 8.3:-72422333 | MS.gene07808:CDS |
| AACGGCCTATCCAAAATCCC+AGG | 0.591191 | 8.3:+72422800 | None:intergenic |
| GCTTCATGTGTTGTATAACA+AGG | 0.597293 | 8.3:-72423221 | MS.gene07808:CDS |
| TTTAGCTTCCAAAACTGCTG+GGG | 0.597660 | 8.3:+72422292 | None:intergenic |
| TGCTCTTGCGCATTTGAGAG+CGG | 0.605421 | 8.3:-72422741 | MS.gene07808:CDS |
| AAGAGTTGGAAAGAGAGGAA+GGG | 0.605706 | 8.3:-72422067 | MS.gene07808:CDS |
| GCCGTTGGATGGGTTATCTG+AGG | 0.607275 | 8.3:-72422585 | MS.gene07808:CDS |
| CCCTGACATTCTACATAGGG+TGG | 0.608061 | 8.3:-72422090 | MS.gene07808:CDS |
| AACCACGTGACCAGAAGGAA+AGG | 0.608119 | 8.3:-72422328 | MS.gene07808:CDS |
| TCACCAGAAGGAAGAAACGA+TGG | 0.608184 | 8.3:-72421744 | MS.gene07808:CDS |
| TTGGTCAGATTAATACTGCT+AGG | 0.610371 | 8.3:-72423180 | MS.gene07808:CDS |
| TCCTCAGATAACCCATCCAA+CGG | 0.612445 | 8.3:+72422584 | None:intergenic |
| AGAAGGAAGAAACGATGGGA+TGG | 0.612953 | 8.3:-72421739 | MS.gene07808:CDS |
| TTAGCTTCCAAAACTGCTGG+GGG | 0.613606 | 8.3:+72422293 | None:intergenic |
| CACCAGAAGGAAGAAACGAT+GGG | 0.615415 | 8.3:-72421743 | MS.gene07808:CDS |
| TGCGTAGCAGATCTGCATCT+AGG | 0.616314 | 8.3:-72421788 | MS.gene07808:CDS |
| ATTGACACCGGAACAGCAAG+AGG | 0.621917 | 8.3:-72421994 | MS.gene07808:CDS |
| AGGTTAGGCAGCATATGGCT+AGG | 0.623301 | 8.3:-72423009 | MS.gene07808:CDS |
| GTGAGAGATTGCTGAACCAG+AGG | 0.624481 | 8.3:-72422418 | MS.gene07808:CDS |
| ATCAAGTCATTGATACACCT+GGG | 0.625389 | 8.3:-72422817 | MS.gene07808:CDS |
| AGCAGATCTGCATCTAGGAA+AGG | 0.625927 | 8.3:-72421783 | MS.gene07808:CDS |
| TCTCCAGGAACAACTTCATG+TGG | 0.626458 | 8.3:+72421639 | None:intergenic |
| TAGCCTTTGTGAACAACGGT+TGG | 0.627876 | 8.3:+72423376 | None:intergenic |
| AAAGCAATTAAACTTGCGAA+GGG | 0.631135 | 8.3:-72421588 | MS.gene07808:CDS |
| CCACCCTATGTAGAATGTCA+GGG | 0.631460 | 8.3:+72422090 | None:intergenic |
| ATCTAGGAAAGGTCGGAAGA+GGG | 0.633227 | 8.3:-72421772 | MS.gene07808:CDS |
| AGAAACAAGAATGCCAAGCG+TGG | 0.633691 | 8.3:-72421552 | MS.gene07808:CDS |
| GATCTGCATCTAGGAAAGGT+CGG | 0.639204 | 8.3:-72421779 | MS.gene07808:CDS |
| GTTGGATGGGTTATCTGAGG+AGG | 0.639325 | 8.3:-72422582 | MS.gene07808:CDS |
| CCAGGAACAACTTCATGTGG+TGG | 0.642177 | 8.3:+72421642 | None:intergenic |
| GGATGAATGTCCCCAAGACG+AGG | 0.644458 | 8.3:+72423259 | None:intergenic |
| GTATTCTAATCCAACAACAT+CGG | 0.653178 | 8.3:-72421944 | MS.gene07808:CDS |
| AAGAGGGAGAGATCACCAGA+AGG | 0.653816 | 8.3:-72421756 | MS.gene07808:CDS |
| CGTTTCAAGGAAATTCGACA+AGG | 0.654192 | 8.3:-72421889 | MS.gene07808:CDS |
| ACACCAACCGTTGTTCACAA+AGG | 0.654882 | 8.3:-72423379 | MS.gene07808:CDS |
| TCACAACAGAAAGAATGGGA+AGG | 0.666061 | 8.3:-72421857 | MS.gene07808:CDS |
| AAGACTTCAATTGGTCATGG+AGG | 0.667217 | 8.3:-72422521 | MS.gene07808:CDS |
| AGATGGAACTGAATTGACAC+CGG | 0.673997 | 8.3:-72422006 | MS.gene07808:CDS |
| TGAGAGATTGCTGAACCAGA+GGG | 0.687755 | 8.3:-72422417 | MS.gene07808:CDS |
| CAATTGGTCATGGAGGTGAG+GGG | 0.688118 | 8.3:-72422514 | MS.gene07808:CDS |
| TGGTGGTCGAGAGACTGACC+TGG | 0.706283 | 8.3:+72421659 | None:intergenic |
| GATCTGGAGGAAGAAAATGG+AGG | 0.758299 | 8.3:-72422227 | MS.gene07808:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACGGATTATAAGTATTTA+AGG | - | chr8.3:72422092-72422111 | MS.gene07808:CDS | 20.0% |
| !!! | TATGTTAAGTTGCTTAAATA+TGG | - | chr8.3:72421803-72421822 | MS.gene07808:CDS | 20.0% |
| !!! | TTTTATCAACAAGATTACTA+GGG | - | chr8.3:72422015-72422034 | MS.gene07808:CDS | 20.0% |
| ! | AAGCAACTTAACATAATCTT+TGG | + | chr8.3:72421798-72421817 | None:intergenic | 25.0% |
| ! | ATAATGCTTTCTCAAATTCA+TGG | + | chr8.3:72422746-72422765 | None:intergenic | 25.0% |
| !! | CTTTTATCAACAAGATTACT+AGG | - | chr8.3:72422014-72422033 | MS.gene07808:CDS | 25.0% |
| !!! | CTTTTCATGAAAATTAGTCT+GGG | + | chr8.3:72421630-72421649 | None:intergenic | 25.0% |
| !!! | TTTGAGAAAGCATTATATTC+TGG | - | chr8.3:72422750-72422769 | MS.gene07808:CDS | 25.0% |
| AAAGCAATTAAACTTGCGAA+GGG | - | chr8.3:72423345-72423364 | MS.gene07808:CDS | 30.0% | |
| AATACTGCTAGGAATCTTAT+TGG | - | chr8.3:72421764-72421783 | MS.gene07808:CDS | 30.0% | |
| ATAATATTCCGATCCTCAAA+CGG | + | chr8.3:72422154-72422173 | None:intergenic | 30.0% | |
| ATCAAAATAGTCCTGGTATT+TGG | + | chr8.3:72421965-72421984 | None:intergenic | 30.0% | |
| ATTCTGTTAATAGCCATAGA+AGG | + | chr8.3:72423126-72423145 | None:intergenic | 30.0% | |
| GTATTCTAATCCAACAACAT+CGG | - | chr8.3:72422989-72423008 | MS.gene07808:CDS | 30.0% | |
| TGTTCTTCTTGGATATATCA+GGG | - | chr8.3:72422221-72422240 | MS.gene07808:CDS | 30.0% | |
| TTGTTCTTCTTGGATATATC+AGG | - | chr8.3:72422220-72422239 | MS.gene07808:CDS | 30.0% | |
| ! | AATACAAGTGCTTTGGTTTA+AGG | + | chr8.3:72423431-72423450 | None:intergenic | 30.0% |
| ! | AGATAATCTGCCAGAAATTT+TGG | - | chr8.3:72422792-72422811 | MS.gene07808:CDS | 30.0% |
| ! | GCTTTTCATGAAAATTAGTC+TGG | + | chr8.3:72421631-72421650 | None:intergenic | 30.0% |
| ! | TCAACGAAATCTTTTCCATT+TGG | + | chr8.3:72421506-72421525 | None:intergenic | 30.0% |
| ! | TCTTTTTAATCCGATGTTGT+TGG | + | chr8.3:72423002-72423021 | None:intergenic | 30.0% |
| !!! | GATGATGATTTTGAGATAGA+TGG | - | chr8.3:72422910-72422929 | MS.gene07808:CDS | 30.0% |
| ATCAAGTCATTGATACACCT+GGG | - | chr8.3:72422116-72422135 | MS.gene07808:CDS | 35.0% | |
| CAAAGCAATTAAACTTGCGA+AGG | - | chr8.3:72423344-72423363 | MS.gene07808:CDS | 35.0% | |
| CAGTTCACAACAGAAAGAAT+GGG | - | chr8.3:72423072-72423091 | MS.gene07808:CDS | 35.0% | |
| CTGGTATTTGGATCAATTGA+AGG | + | chr8.3:72421953-72421972 | None:intergenic | 35.0% | |
| CTTCAATTGATCCAAATACC+AGG | - | chr8.3:72421951-72421970 | MS.gene07808:CDS | 35.0% | |
| CTTGTCGAATTTCCTTGAAA+CGG | + | chr8.3:72423046-72423065 | None:intergenic | 35.0% | |
| GCTTCATGTGTTGTATAACA+AGG | - | chr8.3:72421712-72421731 | MS.gene07808:CDS | 35.0% | |
| TATCAAGTCATTGATACACC+TGG | - | chr8.3:72422115-72422134 | MS.gene07808:CDS | 35.0% | |
| TTGAAGACTTCAATTGGTCA+TGG | - | chr8.3:72422409-72422428 | MS.gene07808:CDS | 35.0% | |
| TTGGTCAGATTAATACTGCT+AGG | - | chr8.3:72421753-72421772 | MS.gene07808:CDS | 35.0% | |
| TTGTGACCATCCAAAATTTC+TGG | + | chr8.3:72422805-72422824 | None:intergenic | 35.0% | |
| TTGTTGCACACAACAATCAA+AGG | + | chr8.3:72422316-72422335 | None:intergenic | 35.0% | |
| TTTCCAGAATACAAGTGCTT+TGG | + | chr8.3:72423438-72423457 | None:intergenic | 35.0% | |
| ! | AAACCAAAGCACTTGTATTC+TGG | - | chr8.3:72423432-72423451 | MS.gene07808:CDS | 35.0% |
| ! | AATCTGCCAGAAATTTTGGA+TGG | - | chr8.3:72422796-72422815 | MS.gene07808:CDS | 35.0% |
| ! | ATATTCTGGCTGATGATGAA+TGG | - | chr8.3:72422764-72422783 | MS.gene07808:CDS | 35.0% |
| ! | ATCTTTTCCATTTGGTACGA+CGG | + | chr8.3:72421498-72421517 | None:intergenic | 35.0% |
| ! | CTTTTCGCATGTAGAATTGT+CGG | + | chr8.3:72421598-72421617 | None:intergenic | 35.0% |
| !!! | ACCAGGACTATTTTGATTTG+TGG | - | chr8.3:72421968-72421987 | MS.gene07808:CDS | 35.0% |
| !!! | CCAGGACTATTTTGATTTGT+GGG | - | chr8.3:72421969-72421988 | MS.gene07808:CDS | 35.0% |
| AAAAACTGAGAAGGATCTGG+AGG | - | chr8.3:72422693-72422712 | MS.gene07808:CDS | 40.0% | |
| AAAAGAACTCTTCCCGACAT+TGG | + | chr8.3:72421999-72422018 | None:intergenic | 40.0% | |
| AAAGAACTCTTCCCGACATT+GGG | + | chr8.3:72421998-72422017 | None:intergenic | 40.0% | |
| AAATCAACGACTGTCTGAAC+AGG | - | chr8.3:72422563-72422582 | MS.gene07808:CDS | 40.0% | |
| AAGACTTCAATTGGTCATGG+AGG | - | chr8.3:72422412-72422431 | MS.gene07808:CDS | 40.0% | |
| AAGAGTTGGAAAGAGAGGAA+GGG | - | chr8.3:72422866-72422885 | MS.gene07808:CDS | 40.0% | |
| AAGATTACCGTCGTACCAAA+TGG | - | chr8.3:72421488-72421507 | MS.gene07808:CDS | 40.0% | |
| AAGGATCTGGAGGAAGAAAA+TGG | - | chr8.3:72422703-72422722 | MS.gene07808:CDS | 40.0% | |
| ACCACTAAGTCGTTGTTTGT+GGG | - | chr8.3:72422067-72422086 | MS.gene07808:CDS | 40.0% | |
| AGATGGAACTGAATTGACAC+CGG | - | chr8.3:72422927-72422946 | MS.gene07808:CDS | 40.0% | |
| AGCGGCAATATTGTTCTTCT+TGG | - | chr8.3:72422210-72422229 | MS.gene07808:CDS | 40.0% | |
| ATCTGAGGAGGATATGAAGT+TGG | - | chr8.3:72422363-72422382 | MS.gene07808:CDS | 40.0% | |
| ATTTCCTTGAAACGGTTGGT+CGG | + | chr8.3:72423038-72423057 | None:intergenic | 40.0% | |
| ATTTGTGGGTATCCCAATGT+CGG | - | chr8.3:72421983-72422002 | MS.gene07808:CDS | 40.0% | |
| CCCACAAATCAAAATAGTCC+TGG | + | chr8.3:72421972-72421991 | None:intergenic | 40.0% | |
| CGTTTCAAGGAAATTCGACA+AGG | - | chr8.3:72423044-72423063 | MS.gene07808:CDS | 40.0% | |
| GACTTAGTGGTAAACGCATA+CGG | + | chr8.3:72422058-72422077 | None:intergenic | 40.0% | |
| GAGAAAAACTGAGAAGGATC+TGG | - | chr8.3:72422690-72422709 | MS.gene07808:CDS | 40.0% | |
| GATCATTACAAGCTTGCACT+TGG | - | chr8.3:72421734-72421753 | MS.gene07808:CDS | 40.0% | |
| GCAGTTCACAACAGAAAGAA+TGG | - | chr8.3:72423071-72423090 | MS.gene07808:CDS | 40.0% | |
| GGAGAAGAGAAAAACTGAGA+AGG | - | chr8.3:72422684-72422703 | MS.gene07808:CDS | 40.0% | |
| TACCACTAAGTCGTTGTTTG+TGG | - | chr8.3:72422066-72422085 | MS.gene07808:CDS | 40.0% | |
| TCACAACAGAAAGAATGGGA+AGG | - | chr8.3:72423076-72423095 | MS.gene07808:CDS | 40.0% | |
| TCATCTTAATCTCAACCCTC+TGG | + | chr8.3:72422534-72422553 | None:intergenic | 40.0% | |
| TCGAATTTCCTTGAAACGGT+TGG | + | chr8.3:72423042-72423061 | None:intergenic | 40.0% | |
| TGAAGCAGATCACCGTAAAA+AGG | + | chr8.3:72421698-72421717 | None:intergenic | 40.0% | |
| TGACCCTGACATTCTACATA+GGG | - | chr8.3:72422840-72422859 | MS.gene07808:CDS | 40.0% | |
| TGCATAGCCTTTGTGAACAA+CGG | + | chr8.3:72421564-72421583 | None:intergenic | 40.0% | |
| TGTACTGTGCTTAAGAGGAT+TGG | - | chr8.3:72421878-72421897 | MS.gene07808:CDS | 40.0% | |
| TTGACCCTGACATTCTACAT+AGG | - | chr8.3:72422839-72422858 | MS.gene07808:CDS | 40.0% | |
| TTGGATATATCAGGGTCTTG+TGG | - | chr8.3:72422229-72422248 | MS.gene07808:CDS | 40.0% | |
| ! | AAGAGGCTTTAGCTGAGATT+AGG | - | chr8.3:72422956-72422975 | MS.gene07808:CDS | 40.0% |
| ! | ACGAGGAAACTCATCGATTA+TGG | + | chr8.3:72421660-72421679 | None:intergenic | 40.0% |
| ! | AGTTTTTCTCTTCTCCTCAG+CGG | + | chr8.3:72422680-72422699 | None:intergenic | 40.0% |
| ! | ATACACCTGGGATTTTGGAT+AGG | - | chr8.3:72422128-72422147 | MS.gene07808:CDS | 40.0% |
| ! | CATTGATACACCTGGGATTT+TGG | - | chr8.3:72422123-72422142 | MS.gene07808:CDS | 40.0% |
| ! | CTTTAGCTTCCAAAACTGCT+GGG | + | chr8.3:72422645-72422664 | None:intergenic | 40.0% |
| ! | GGCATTCTTGTTTCTCTTCT+TGG | + | chr8.3:72423376-72423395 | None:intergenic | 40.0% |
| ! | GGGGACATTCATCCTTTTTA+CGG | - | chr8.3:72421683-72421702 | MS.gene07808:CDS | 40.0% |
| ! | TCTTTTGAGCAGAATCCCTA+AGG | + | chr8.3:72423323-72423342 | None:intergenic | 40.0% |
| ! | TGGATATATCAGGGTCTTGT+GGG | - | chr8.3:72422230-72422249 | MS.gene07808:CDS | 40.0% |
| ! | TTTAGCTTCCAAAACTGCTG+GGG | + | chr8.3:72422644-72422663 | None:intergenic | 40.0% |
| !! | GAAGCGTTGAAGACTTCAAT+TGG | - | chr8.3:72422403-72422422 | MS.gene07808:CDS | 40.0% |
| AAAACTGCTGGGGGAATACA+CGG | + | chr8.3:72422634-72422653 | None:intergenic | 45.0% | |
| ACACCAACCGTTGTTCACAA+AGG | - | chr8.3:72421554-72421573 | MS.gene07808:CDS | 45.0% | |
| ACCCACAAACAACGACTTAG+TGG | + | chr8.3:72422071-72422090 | None:intergenic | 45.0% | |
| AGAAACAAGAATGCCAAGCG+TGG | - | chr8.3:72423381-72423400 | MS.gene07808:CDS | 45.0% | |
| AGAAGGAAGAAACGATGGGA+TGG | - | chr8.3:72423194-72423213 | MS.gene07808:CDS | 45.0% | |
| AGCAGATCTGCATCTAGGAA+AGG | - | chr8.3:72423150-72423169 | MS.gene07808:CDS | 45.0% | |
| ATCCCATCGTTTCTTCCTTC+TGG | + | chr8.3:72423195-72423214 | None:intergenic | 45.0% | |
| ATCGATGAGTTTCCTCGTCT+TGG | - | chr8.3:72421662-72421681 | MS.gene07808:CDS | 45.0% | |
| ATCTAGGAAAGGTCGGAAGA+GGG | - | chr8.3:72423161-72423180 | MS.gene07808:CDS | 45.0% | |
| CAAGGAAATTCGACAAGGAC+AGG | - | chr8.3:72423049-72423068 | MS.gene07808:CDS | 45.0% | |
| CACCAGAAGGAAGAAACGAT+GGG | - | chr8.3:72423190-72423209 | MS.gene07808:CDS | 45.0% | |
| CATGAAGTTGTTCCTGGAGA+AGG | - | chr8.3:72423297-72423316 | MS.gene07808:CDS | 45.0% | |
| CCACCCTATGTAGAATGTCA+GGG | + | chr8.3:72422846-72422865 | None:intergenic | 45.0% | |
| GAAGAGTTGGAAAGAGAGGA+AGG | - | chr8.3:72422865-72422884 | MS.gene07808:CDS | 45.0% | |
| GATCTGCATCTAGGAAAGGT+CGG | - | chr8.3:72423154-72423173 | MS.gene07808:CDS | 45.0% | |
| GATCTGGAGGAAGAAAATGG+AGG | - | chr8.3:72422706-72422725 | MS.gene07808:CDS | 45.0% | |
| GGATGTGTACTGTGCTTAAG+AGG | - | chr8.3:72421873-72421892 | MS.gene07808:CDS | 45.0% | |
| GTATCGCTGTAAGTGCTTGA+AGG | - | chr8.3:72421835-72421854 | MS.gene07808:CDS | 45.0% | |
| GTCGTTGTTTGTGGGTCATA+CGG | - | chr8.3:72422075-72422094 | MS.gene07808:CDS | 45.0% | |
| TAAGAGGATTGGACCGAGTT+TGG | - | chr8.3:72421889-72421908 | MS.gene07808:CDS | 45.0% | |
| TAGCCTTTGTGAACAACGGT+TGG | + | chr8.3:72421560-72421579 | None:intergenic | 45.0% | |
| TCAATTGGTCATGGAGGTGA+GGG | - | chr8.3:72422418-72422437 | MS.gene07808:CDS | 45.0% | |
| TCACCAGAAGGAAGAAACGA+TGG | - | chr8.3:72423189-72423208 | MS.gene07808:CDS | 45.0% | |
| TCCACCCTATGTAGAATGTC+AGG | + | chr8.3:72422847-72422866 | None:intergenic | 45.0% | |
| TCCTCAGATAACCCATCCAA+CGG | + | chr8.3:72422352-72422371 | None:intergenic | 45.0% | |
| TCGATGAGTTTCCTCGTCTT+GGG | - | chr8.3:72421663-72421682 | MS.gene07808:CDS | 45.0% | |
| TCTACATAGGGTGGAAGAGT+TGG | - | chr8.3:72422852-72422871 | MS.gene07808:CDS | 45.0% | |
| TCTCCAGGAACAACTTCATG+TGG | + | chr8.3:72423297-72423316 | None:intergenic | 45.0% | |
| TCTTGGGCTTGATCCTTCTA+TGG | - | chr8.3:72423110-72423129 | MS.gene07808:CDS | 45.0% | |
| TGAGAGATTGCTGAACCAGA+GGG | - | chr8.3:72422516-72422535 | MS.gene07808:CDS | 45.0% | |
| TGCTCCAAATACGCCAAACT+CGG | + | chr8.3:72421905-72421924 | None:intergenic | 45.0% | |
| TGGAAAGAGAGGAAGGGTTA+AGG | - | chr8.3:72422872-72422891 | MS.gene07808:CDS | 45.0% | |
| TGGGTATACTATTGCTCAGC+AGG | - | chr8.3:72422249-72422268 | MS.gene07808:CDS | 45.0% | |
| TTAGCTTCCAAAACTGCTGG+GGG | + | chr8.3:72422643-72422662 | None:intergenic | 45.0% | |
| TTCAATTGGTCATGGAGGTG+AGG | - | chr8.3:72422417-72422436 | MS.gene07808:CDS | 45.0% | |
| TTTGTGGGTATCCCAATGTC+GGG | - | chr8.3:72421984-72422003 | MS.gene07808:CDS | 45.0% | |
| ! | AACGGTTGGTGTTTGACGTT+GGG | + | chr8.3:72421546-72421565 | None:intergenic | 45.0% |
| ! | AGGCTTTAGCTGAGATTAGG+AGG | - | chr8.3:72422959-72422978 | MS.gene07808:CDS | 45.0% |
| ! | GATTTTGGATAGGCCGTTTG+AGG | - | chr8.3:72422138-72422157 | MS.gene07808:CDS | 45.0% |
| ! | GCTTTAGCTTCCAAAACTGC+TGG | + | chr8.3:72422646-72422665 | None:intergenic | 45.0% |
| !! | ATGAGTGCGTTGACTGAAGA+AGG | - | chr8.3:72422466-72422485 | MS.gene07808:CDS | 45.0% |
| !! | TATTCTGGAAAGCGCTCCAA+AGG | - | chr8.3:72423447-72423466 | MS.gene07808:CDS | 45.0% |
| AACCACGTGACCAGAAGGAA+AGG | - | chr8.3:72422605-72422624 | MS.gene07808:CDS | 50.0% | |
| AACGGCCTATCCAAAATCCC+AGG | + | chr8.3:72422136-72422155 | None:intergenic | 50.0% | |
| AAGAGAGGAAGGGTTAAGGC+AGG | - | chr8.3:72422876-72422895 | MS.gene07808:CDS | 50.0% | |
| AAGAGGGAGAGATCACCAGA+AGG | - | chr8.3:72423177-72423196 | MS.gene07808:CDS | 50.0% | |
| AGGTTAGGCAGCATATGGCT+AGG | - | chr8.3:72421924-72421943 | MS.gene07808:CDS | 50.0% | |
| ATTGACACCGGAACAGCAAG+AGG | - | chr8.3:72422939-72422958 | MS.gene07808:CDS | 50.0% | |
| CAATTGGTCATGGAGGTGAG+GGG | - | chr8.3:72422419-72422438 | MS.gene07808:CDS | 50.0% | |
| CATCTAGGAAAGGTCGGAAG+AGG | - | chr8.3:72423160-72423179 | MS.gene07808:CDS | 50.0% | |
| CCACCACATGAAGTTGTTCC+TGG | - | chr8.3:72423291-72423310 | MS.gene07808:CDS | 50.0% | |
| CCAGGAACAACTTCATGTGG+TGG | + | chr8.3:72423294-72423313 | None:intergenic | 50.0% | |
| CCCTGACATTCTACATAGGG+TGG | - | chr8.3:72422843-72422862 | MS.gene07808:CDS | 50.0% | |
| CGATGAGTTTCCTCGTCTTG+GGG | - | chr8.3:72421664-72421683 | MS.gene07808:CDS | 50.0% | |
| CTGGTTCAGCAATCTCTCAC+AGG | + | chr8.3:72422515-72422534 | None:intergenic | 50.0% | |
| GCTCCAAAGGAAAGACAGAC+AGG | - | chr8.3:72423460-72423479 | MS.gene07808:CDS | 50.0% | |
| GCTTGAAGGTTGCTGCTCTT+GGG | - | chr8.3:72421849-72421868 | MS.gene07808:CDS | 50.0% | |
| GGTGGAAGAGTTGGAAAGAG+AGG | - | chr8.3:72422861-72422880 | MS.gene07808:CDS | 50.0% | |
| GTAGATCACTGTCTCGTTCC+AGG | - | chr8.3:72423256-72423275 | MS.gene07808:CDS | 50.0% | |
| GTGAGAGATTGCTGAACCAG+AGG | - | chr8.3:72422515-72422534 | MS.gene07808:CDS | 50.0% | |
| TCCTTCTGGTCACGTGGTTT+CGG | + | chr8.3:72422604-72422623 | None:intergenic | 50.0% | |
| TCTATCAGCTTCTCCACGCT+TGG | + | chr8.3:72423397-72423416 | None:intergenic | 50.0% | |
| TGCGTAGCAGATCTGCATCT+AGG | - | chr8.3:72423145-72423164 | MS.gene07808:CDS | 50.0% | |
| TGCTCTTGCGCATTTGAGAG+CGG | - | chr8.3:72422192-72422211 | MS.gene07808:CDS | 50.0% | |
| TGCTTGAAGGTTGCTGCTCT+TGG | - | chr8.3:72421848-72421867 | MS.gene07808:CDS | 50.0% | |
| TGGACCGAGTTTGGCGTATT+TGG | - | chr8.3:72421898-72421917 | MS.gene07808:CDS | 50.0% | |
| TGGATAGGCCGTTTGAGGAT+CGG | - | chr8.3:72422143-72422162 | MS.gene07808:CDS | 50.0% | |
| TGTTCCTGGAGAAGGCCTTA+GGG | - | chr8.3:72423305-72423324 | MS.gene07808:CDS | 50.0% | |
| TTGTTCCTGGAGAAGGCCTT+AGG | - | chr8.3:72423304-72423323 | MS.gene07808:CDS | 50.0% | |
| ! | CAACGGTTGGTGTTTGACGT+TGG | + | chr8.3:72421547-72421566 | None:intergenic | 50.0% |
| ! | CTGATTTGCAGCCGTTGGAT+GGG | - | chr8.3:72422338-72422357 | MS.gene07808:CDS | 50.0% |
| ! | GAGTTTGGCGTATTTGGAGC+AGG | - | chr8.3:72421904-72421923 | MS.gene07808:CDS | 50.0% |
| ! | GTGTATTCCCCCAGCAGTTT+TGG | - | chr8.3:72422633-72422652 | MS.gene07808:CDS | 50.0% |
| ! | TGGCGTATTTGGAGCAGGTT+AGG | - | chr8.3:72421909-72421928 | MS.gene07808:CDS | 50.0% |
| !! | ACTGATTTGCAGCCGTTGGA+TGG | - | chr8.3:72422337-72422356 | MS.gene07808:CDS | 50.0% |
| !! | CAAGACTGATTTGCAGCCGT+TGG | - | chr8.3:72422333-72422352 | MS.gene07808:CDS | 50.0% |
| !! | CTGAGACGCTGTTTCTTGCT+AGG | + | chr8.3:72423237-72423256 | None:intergenic | 50.0% |
| !! | GCTAAAGCCTCTTGCTGTTC+CGG | + | chr8.3:72422949-72422968 | None:intergenic | 50.0% |
| !! | GTTGGATGGGTTATCTGAGG+AGG | - | chr8.3:72422351-72422370 | MS.gene07808:CDS | 50.0% |
| AGAGCCGACCAACCGTTTCA+AGG | - | chr8.3:72423031-72423050 | MS.gene07808:CDS | 55.0% | |
| GAAGGCAGCTGTCGTCTCTT+GGG | - | chr8.3:72423094-72423113 | MS.gene07808:CDS | 55.0% | |
| GAATCCCTAAGGCCTTCTCC+AGG | + | chr8.3:72423312-72423331 | None:intergenic | 55.0% | |
| GCGCCTGTCTGTCTTTCCTT+TGG | + | chr8.3:72423466-72423485 | None:intergenic | 55.0% | |
| GGAGCAGGTTAGGCAGCATA+TGG | - | chr8.3:72421919-72421938 | MS.gene07808:CDS | 55.0% | |
| GGATGAATGTCCCCAAGACG+AGG | + | chr8.3:72421677-72421696 | None:intergenic | 55.0% | |
| TACACGGAGGCCTTTCCTTC+TGG | + | chr8.3:72422618-72422637 | None:intergenic | 55.0% | |
| TCCGAAACCACGTGACCAGA+AGG | - | chr8.3:72422600-72422619 | MS.gene07808:CDS | 55.0% | |
| TGAAGGTTGCTGCTCTTGGG+AGG | - | chr8.3:72421852-72421871 | MS.gene07808:CDS | 55.0% | |
| ! | GAGGAAGAAAATGGAGGCGC+TGG | - | chr8.3:72422712-72422731 | MS.gene07808:CDS | 55.0% |
| !! | GCCGTTGGATGGGTTATCTG+AGG | - | chr8.3:72422348-72422367 | MS.gene07808:CDS | 55.0% |
| ACTGCTGGGGGAATACACGG+AGG | + | chr8.3:72422631-72422650 | None:intergenic | 60.0% | |
| AGCTAAGCAAGCAGCCGCTG+AGG | - | chr8.3:72422663-72422682 | MS.gene07808:CDS | 60.0% | |
| GGAAGGCAGCTGTCGTCTCT+TGG | - | chr8.3:72423093-72423112 | MS.gene07808:CDS | 60.0% | |
| GGCCTTTCCTTCTGGTCACG+TGG | + | chr8.3:72422610-72422629 | None:intergenic | 60.0% | |
| TGGTCATGGAGGTGAGGGGA+CGG | - | chr8.3:72422423-72422442 | MS.gene07808:CDS | 60.0% | |
| TGGTGGTCGAGAGACTGACC+TGG | + | chr8.3:72423277-72423296 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 72421467 | 72423488 | 72421467 | ID=MS.gene07808 |
| chr8.3 | mRNA | 72421467 | 72423488 | 72421467 | ID=MS.gene07808.t1;Parent=MS.gene07808 |
| chr8.3 | exon | 72421467 | 72423488 | 72421467 | ID=MS.gene07808.t1.exon1;Parent=MS.gene07808.t1 |
| chr8.3 | CDS | 72421467 | 72423488 | 72421467 | ID=cds.MS.gene07808.t1;Parent=MS.gene07808.t1 |
| Gene Sequence |
| Protein sequence |
