Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37379.t1 | RHN39333.1 | 99.7 | 673 | 2 | 0 | 1 | 673 | 1 | 673 | 0.00E+00 | 1209.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37379.t1 | Q9C6I8 | 79.7 | 675 | 131 | 2 | 1 | 673 | 1 | 671 | 1.8e-279 | 963.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37379.t1 | A0A396GF36 | 99.7 | 673 | 2 | 0 | 1 | 673 | 1 | 673 | 0.0e+00 | 1209.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051963 | MS.gene37379 | 0.827143 | 1.84E-54 | -1.69E-46 |
| MS.gene057052 | MS.gene37379 | 0.806692 | 7.27E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37379.t1 | MTR_8g018150 | 99.554 | 673 | 3 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1380 |
| MS.gene37379.t1 | MTR_2g078050 | 95.691 | 673 | 6 | 1 | 1 | 673 | 1 | 650 | 0.0 | 1315 |
| MS.gene37379.t1 | MTR_2g078050 | 98.883 | 537 | 6 | 0 | 137 | 673 | 1 | 537 | 0.0 | 1088 |
| MS.gene37379.t1 | MTR_7g450930 | 28.065 | 310 | 196 | 5 | 62 | 361 | 49 | 341 | 3.01e-31 | 125 |
| MS.gene37379.t1 | MTR_7g450930 | 28.065 | 310 | 196 | 5 | 62 | 361 | 136 | 428 | 2.74e-30 | 124 |
| MS.gene37379.t1 | MTR_7g450930 | 29.707 | 239 | 154 | 2 | 62 | 293 | 136 | 367 | 2.08e-29 | 121 |
| MS.gene37379.t1 | MTR_2g082240 | 62.500 | 112 | 36 | 3 | 566 | 673 | 39 | 148 | 1.12e-28 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37379.t1 | AT1G50920 | 77.434 | 678 | 141 | 5 | 1 | 673 | 1 | 671 | 0.0 | 1073 |
| MS.gene37379.t1 | AT1G10300 | 70.441 | 680 | 172 | 6 | 1 | 673 | 30 | 687 | 0.0 | 931 |
| MS.gene37379.t1 | AT1G10300 | 70.441 | 680 | 172 | 6 | 1 | 673 | 30 | 687 | 0.0 | 931 |
| MS.gene37379.t1 | AT1G10300 | 70.441 | 680 | 172 | 6 | 1 | 673 | 1 | 658 | 0.0 | 930 |
| MS.gene37379.t1 | AT1G80770 | 25.967 | 362 | 256 | 4 | 6 | 365 | 76 | 427 | 1.61e-30 | 125 |
| MS.gene37379.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 69 | 355 | 2.93e-30 | 124 |
| MS.gene37379.t1 | AT1G80770 | 25.967 | 362 | 256 | 4 | 6 | 365 | 92 | 443 | 4.16e-30 | 124 |
| MS.gene37379.t1 | AT1G80770 | 28.448 | 232 | 166 | 0 | 62 | 293 | 51 | 282 | 4.25e-30 | 122 |
| MS.gene37379.t1 | AT1G80770 | 25.967 | 362 | 256 | 4 | 6 | 365 | 107 | 458 | 6.76e-30 | 124 |
| MS.gene37379.t1 | AT1G80770 | 25.967 | 362 | 256 | 4 | 6 | 365 | 123 | 474 | 1.53e-29 | 123 |
| MS.gene37379.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 6 | 184 | 4.38e-20 | 90.1 |
| MS.gene37379.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 7.13e-20 | 90.1 |
| MS.gene37379.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 7.13e-20 | 90.1 |
Find 159 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACAAGTGCTTCGGTTTA+AGG | 0.111950 | 8.4:-74483677 | None:intergenic |
| GGCATTCTTGTTTCTCTTCT+TGG | 0.114794 | 8.4:-74483622 | None:intergenic |
| CATTGATACACCTGGGATTT+TGG | 0.122171 | 8.4:+74482372 | MS.gene37379:CDS |
| AGATAATCTGCCAGAAATTT+TGG | 0.147637 | 8.4:+74483041 | MS.gene37379:CDS |
| ATCAAAATAGTCCTGGTATT+TGG | 0.197584 | 8.4:-74482211 | None:intergenic |
| TTGTTCTTCTTGGATATATC+AGG | 0.214420 | 8.4:+74482469 | MS.gene37379:CDS |
| TGGGCCGAGTTTGGCGTATT+TGG | 0.227689 | 8.4:+74482147 | MS.gene37379:CDS |
| ATACGGATTATAAGTATTTA+AGG | 0.228633 | 8.4:+74482341 | MS.gene37379:CDS |
| AAACCGAAGCACTTGTATTC+TGG | 0.228894 | 8.4:+74483681 | MS.gene37379:CDS |
| AATACTGCTAGGAATCTTAT+TGG | 0.238602 | 8.4:+74482013 | MS.gene37379:CDS |
| TTGTGACCATCCAAAATTTC+TGG | 0.250913 | 8.4:-74483051 | None:intergenic |
| TCCTTCTGGTCACGTGGTTT+CGG | 0.274078 | 8.4:-74482850 | None:intergenic |
| AGCGGCAATATTGTTCTTCT+TGG | 0.291223 | 8.4:+74482459 | MS.gene37379:CDS |
| TACACGGAGGCCTTTCCTTC+TGG | 0.303728 | 8.4:-74482864 | None:intergenic |
| TATGTTAAGTTGCTTAAATA+TGG | 0.304848 | 8.4:+74482052 | MS.gene37379:CDS |
| ATAATGCTTTCTCAAATTCA+TGG | 0.310089 | 8.4:-74482992 | None:intergenic |
| TCTTGGGCTTGATCCTTCTA+TGG | 0.315254 | 8.4:+74483359 | MS.gene37379:CDS |
| ATCCCATCGTTTCTTCCTTC+TGG | 0.317491 | 8.4:-74483441 | None:intergenic |
| TGCTTGAAGGTTGCTGCTCT+TGG | 0.323045 | 8.4:+74482097 | MS.gene37379:CDS |
| TTTGAGAAAGCATTATATTC+TGG | 0.326466 | 8.4:+74482999 | MS.gene37379:CDS |
| GCTAAAGCCTCTTGCTGTTC+CGG | 0.334792 | 8.4:-74483195 | None:intergenic |
| GTAGATCACTGTCTCGTTCC+AGG | 0.336726 | 8.4:+74483505 | MS.gene37379:CDS |
| GCGCCTGTCTGTCTTTCCTT+TGG | 0.337022 | 8.4:-74483712 | None:intergenic |
| AAGGATCTGGAGGAAGAAAA+TGG | 0.337588 | 8.4:+74482952 | MS.gene37379:CDS |
| TGAAGCAGATCACCGTAAAA+AGG | 0.338890 | 8.4:-74481944 | None:intergenic |
| GGAAGGCAGCTGTCGTCTCT+TGG | 0.361895 | 8.4:+74483342 | MS.gene37379:CDS |
| TAAGAGGATTGGGCCGAGTT+TGG | 0.363769 | 8.4:+74482138 | MS.gene37379:CDS |
| TTGTTCCTGGAGAAGGCCTT+AGG | 0.365376 | 8.4:+74483553 | MS.gene37379:CDS |
| ACGAGGAAACTCATCGATTA+TGG | 0.370750 | 8.4:-74481906 | None:intergenic |
| CCACCACATGAAGTTGTTCC+TGG | 0.371926 | 8.4:+74483540 | MS.gene37379:CDS |
| GTGAAATTGCATAGCCTTTG+TGG | 0.373188 | 8.4:-74481817 | None:intergenic |
| TGGATATATCAGGGTCTTGT+GGG | 0.379230 | 8.4:+74482479 | MS.gene37379:CDS |
| TCCACCCTATGTAGAATGTC+AGG | 0.383879 | 8.4:-74483093 | None:intergenic |
| TGGAAAGAGAGGAAGGGTTA+AGG | 0.386417 | 8.4:+74483121 | MS.gene37379:CDS |
| TACCACTAAGTCGCTGTTTG+TGG | 0.397916 | 8.4:+74482315 | MS.gene37379:CDS |
| ATCGATGAGTTTCCTCGTCT+TGG | 0.399359 | 8.4:+74481911 | MS.gene37379:CDS |
| AACGGTTGGTGTTTGACGTT+GGG | 0.420407 | 8.4:-74481792 | None:intergenic |
| GCTTGAAGGTTGCTGCTCTT+GGG | 0.424098 | 8.4:+74482098 | MS.gene37379:CDS |
| GCTTTAGCTTCCAAAACTGC+TGG | 0.426248 | 8.4:-74482892 | None:intergenic |
| TTGGATATATCAGGGTCTTG+TGG | 0.430521 | 8.4:+74482478 | MS.gene37379:CDS |
| ACCCACAAACAGCGACTTAG+TGG | 0.433204 | 8.4:-74482317 | None:intergenic |
| AAGAGGCTTTAGCTGAGATT+AGG | 0.440739 | 8.4:+74483205 | MS.gene37379:CDS |
| ACCACTAAGTCGCTGTTTGT+GGG | 0.442566 | 8.4:+74482316 | MS.gene37379:CDS |
| AAAGAACTCTTCCCGACATT+GGG | 0.444776 | 8.4:-74482244 | None:intergenic |
| GAAGCGTTGAAGACTTCAAT+TGG | 0.448210 | 8.4:+74482652 | MS.gene37379:CDS |
| GAAGAGTTGGAAAGAGAGGA+AGG | 0.448886 | 8.4:+74483114 | MS.gene37379:CDS |
| GAAGGCAGCTGTCGTCTCTT+GGG | 0.448895 | 8.4:+74483343 | MS.gene37379:CDS |
| GAGTTTGGCGTATTTGGAAC+AGG | 0.449120 | 8.4:+74482153 | MS.gene37379:CDS |
| GGAACAGGTTAGGCAGCATA+TGG | 0.451534 | 8.4:+74482168 | MS.gene37379:CDS |
| GCAGTTCACAACAGAAAGAA+TGG | 0.457219 | 8.4:+74483320 | MS.gene37379:CDS |
| ATAATATTCCGATCCTCAAA+TGG | 0.459546 | 8.4:-74482400 | None:intergenic |
| GTCGCTGTTTGTGGGTCATA+CGG | 0.461201 | 8.4:+74482324 | MS.gene37379:CDS |
| AAATCAACGACTGTCTGAAC+AGG | 0.462069 | 8.4:+74482812 | MS.gene37379:CDS |
| GGTGGAAGAGTTGGAAAGAG+AGG | 0.462216 | 8.4:+74483110 | MS.gene37379:CDS |
| CTGAGACGCTGTTTCTTGCT+AGG | 0.462261 | 8.4:-74483483 | None:intergenic |
| GGATGTGTACTGTGCTTAAG+AGG | 0.463986 | 8.4:+74482122 | MS.gene37379:CDS |
| TGGCGTATTTGGAACAGGTT+AGG | 0.466876 | 8.4:+74482158 | MS.gene37379:CDS |
| TTTCCAGAATACAAGTGCTT+CGG | 0.468413 | 8.4:-74483684 | None:intergenic |
| GTATCGCTGTAAGTGCTTGA+AGG | 0.470038 | 8.4:+74482084 | MS.gene37379:CDS |
| TCGAATTTCCTTGAAACGGT+TGG | 0.471228 | 8.4:-74483288 | None:intergenic |
| AGAGCCGACCAACCGTTTCA+AGG | 0.471571 | 8.4:+74483280 | MS.gene37379:CDS |
| AAGATTACCGTCGTACCAAA+TGG | 0.472320 | 8.4:+74481737 | MS.gene37379:CDS |
| ATTCTGTTAATAGCCATAGA+AGG | 0.473599 | 8.4:-74483372 | None:intergenic |
| CAAGGAAATTCGACAAGGAC+AGG | 0.474490 | 8.4:+74483298 | MS.gene37379:CDS |
| CTTGTCGAATTTCCTTGAAA+CGG | 0.475481 | 8.4:-74483292 | None:intergenic |
| CTGGTATTTGGATCAATTGA+AGG | 0.475786 | 8.4:-74482199 | None:intergenic |
| ACTGATTTGCAGCCGTTGGA+TGG | 0.477148 | 8.4:+74482586 | MS.gene37379:CDS |
| AAAAGAACTCTTCCCGACAT+TGG | 0.486940 | 8.4:-74482245 | None:intergenic |
| TGTACTGTGCTTAAGAGGAT+TGG | 0.487043 | 8.4:+74482127 | MS.gene37379:CDS |
| CAAGACTGATTTGCAGCCGT+TGG | 0.487122 | 8.4:+74482582 | MS.gene37379:CDS |
| CTTTAGCTTCCAAAACTGCT+GGG | 0.494188 | 8.4:-74482891 | None:intergenic |
| TGGGTATACTATTGCTCAGC+AGG | 0.498609 | 8.4:+74482498 | MS.gene37379:CDS |
| TGTTCCTGGAGAAGGCCTTA+GGG | 0.506108 | 8.4:+74483554 | MS.gene37379:CDS |
| TCTACATAGGGTGGAAGAGT+TGG | 0.506957 | 8.4:+74483101 | MS.gene37379:CDS |
| TCATCTTAATCTCAACCCTC+TGG | 0.510875 | 8.4:-74482780 | None:intergenic |
| TCTATCAGCTTCTCCACGCT+TGG | 0.514227 | 8.4:-74483643 | None:intergenic |
| TTTGTGGGTATCCCAATGTC+GGG | 0.518939 | 8.4:+74482233 | MS.gene37379:CDS |
| CTGATTTGCAGCCGTTGGAT+GGG | 0.521692 | 8.4:+74482587 | MS.gene37379:CDS |
| CATGAAGTTGTTCCTGGAGA+AGG | 0.522867 | 8.4:+74483546 | MS.gene37379:CDS |
| GAGGAAGAAAATGGAGGCGC+TGG | 0.523495 | 8.4:+74482961 | MS.gene37379:CDS |
| AGGCTTTAGCTGAGATTAGG+AGG | 0.525671 | 8.4:+74483208 | MS.gene37379:CDS |
| TGGATAGGCCATTTGAGGAT+CGG | 0.532143 | 8.4:+74482392 | MS.gene37379:CDS |
| GTACTGTGCTTAAGAGGATT+GGG | 0.532555 | 8.4:+74482128 | MS.gene37379:CDS |
| GATCATTACAAGCTTGCACT+TGG | 0.533978 | 8.4:+74481983 | MS.gene37379:CDS |
| TTGAAGACTTCAATTGGTCA+TGG | 0.534533 | 8.4:+74482658 | MS.gene37379:CDS |
| ATATTCTGGCTGATGATGAA+TGG | 0.535908 | 8.4:+74483013 | MS.gene37379:CDS |
| CATCTAGGAAAGGTCGGAAG+AGG | 0.537520 | 8.4:+74483409 | MS.gene37379:CDS |
| GGCCTTTCCTTCTGGTCACG+TGG | 0.537839 | 8.4:-74482856 | None:intergenic |
| CAGTTCACAACAGAAAGAAT+GGG | 0.538822 | 8.4:+74483321 | MS.gene37379:CDS |
| TGTTCTTCTTGGATATATCA+GGG | 0.539338 | 8.4:+74482470 | MS.gene37379:CDS |
| CTGGTTCAGCAATCTCTCAC+AGG | 0.539812 | 8.4:-74482761 | None:intergenic |
| ATTTGTGGGTATCCCAATGT+CGG | 0.540169 | 8.4:+74482232 | MS.gene37379:CDS |
| TGGTCATGGAGGTGAGGGGA+CGG | 0.540574 | 8.4:+74482672 | MS.gene37379:CDS |
| GCTCCAAAGGAAAGACAGAC+AGG | 0.543840 | 8.4:+74483709 | MS.gene37379:CDS |
| ATCTGAGGAGGATATGAAGT+TGG | 0.544907 | 8.4:+74482612 | MS.gene37379:CDS |
| TTGACCCTGACATTCTACAT+AGG | 0.545444 | 8.4:+74483088 | MS.gene37379:CDS |
| TGAAGGTTGCTGCTCTTGGG+AGG | 0.546694 | 8.4:+74482101 | MS.gene37379:CDS |
| ATTTCCTTGAAACGGTTGGT+CGG | 0.548211 | 8.4:-74483284 | None:intergenic |
| GACTTAGTGGTAAACGCATA+CGG | 0.548539 | 8.4:-74482304 | None:intergenic |
| CCCACAAATCAAAATAGTCC+TGG | 0.549797 | 8.4:-74482218 | None:intergenic |
| TGCATAGCCTTTGTGGACAA+CGG | 0.553047 | 8.4:-74481810 | None:intergenic |
| GAATCCCTAAGGCCTTCTCC+AGG | 0.554177 | 8.4:-74483558 | None:intergenic |
| TATCAAGTCATTGATACACC+TGG | 0.555673 | 8.4:+74482364 | MS.gene37379:CDS |
| CAAAGCAATTAAACTTGCGA+AGG | 0.557324 | 8.4:+74483593 | MS.gene37379:CDS |
| TCAATTGGTCATGGAGGTGA+GGG | 0.557674 | 8.4:+74482667 | MS.gene37379:CDS |
| AAGAGAGGAAGGGTTAAGGC+AGG | 0.562461 | 8.4:+74483125 | MS.gene37379:CDS |
| TTCAATTGGTCATGGAGGTG+AGG | 0.562813 | 8.4:+74482666 | MS.gene37379:CDS |
| CAACGGTTGGTGTTTGACGT+TGG | 0.567437 | 8.4:-74481793 | None:intergenic |
| ATGAGTGCGTTGACTGAAGA+AGG | 0.569510 | 8.4:+74482715 | MS.gene37379:CDS |
| AGCTAAGCAAGCAGCCGCTG+AGG | 0.574580 | 8.4:+74482912 | MS.gene37379:CDS |
| TTGTTGCACACAACAATCAA+AGG | 0.575746 | 8.4:-74482562 | None:intergenic |
| TGACCCTGACATTCTACATA+GGG | 0.576210 | 8.4:+74483089 | MS.gene37379:CDS |
| CTTCAATTGATCCAAATACC+AGG | 0.577769 | 8.4:+74482200 | MS.gene37379:CDS |
| TATTCTGGAAAGCGCTCCAA+AGG | 0.584874 | 8.4:+74483696 | MS.gene37379:CDS |
| TCCGAAACCACGTGACCAGA+AGG | 0.588470 | 8.4:+74482849 | MS.gene37379:CDS |
| TGTTCCAAATACGCCAAACT+CGG | 0.588633 | 8.4:-74482151 | None:intergenic |
| TTTAGCTTCCAAAACTGCTG+GGG | 0.597660 | 8.4:-74482890 | None:intergenic |
| TGCTCTTGCGCATTTGAGAG+CGG | 0.605421 | 8.4:+74482441 | MS.gene37379:CDS |
| AAGAGTTGGAAAGAGAGGAA+GGG | 0.605706 | 8.4:+74483115 | MS.gene37379:CDS |
| GCCGTTGGATGGGTTATCTG+AGG | 0.607275 | 8.4:+74482597 | MS.gene37379:CDS |
| CCCTGACATTCTACATAGGG+TGG | 0.608061 | 8.4:+74483092 | MS.gene37379:CDS |
| AACCACGTGACCAGAAGGAA+AGG | 0.608119 | 8.4:+74482854 | MS.gene37379:CDS |
| TCACCAGAAGGAAGAAACGA+TGG | 0.608184 | 8.4:+74483438 | MS.gene37379:CDS |
| ATCACTGTCTCGTTCCAGGT+CGG | 0.608845 | 8.4:+74483509 | MS.gene37379:CDS |
| TTGGTCAGATTAATACTGCT+AGG | 0.610371 | 8.4:+74482002 | MS.gene37379:CDS |
| TCCTCAGATAACCCATCCAA+CGG | 0.612445 | 8.4:-74482598 | None:intergenic |
| AGAAGGAAGAAACGATGGGA+TGG | 0.612953 | 8.4:+74483443 | MS.gene37379:CDS |
| TTAGCTTCCAAAACTGCTGG+GGG | 0.613606 | 8.4:-74482889 | None:intergenic |
| CACCAGAAGGAAGAAACGAT+GGG | 0.615415 | 8.4:+74483439 | MS.gene37379:CDS |
| TGCGTAGCAGATCTGCATCT+AGG | 0.616314 | 8.4:+74483394 | MS.gene37379:CDS |
| AGGTTAGGCAGCATATGGCT+AGG | 0.618497 | 8.4:+74482173 | MS.gene37379:CDS |
| AATGGCCTATCCAAAATCCC+AGG | 0.619321 | 8.4:-74482382 | None:intergenic |
| ATTGACACCGGAACAGCAAG+AGG | 0.621917 | 8.4:+74483188 | MS.gene37379:CDS |
| TAGCCTTTGTGGACAACGGT+TGG | 0.623554 | 8.4:-74481806 | None:intergenic |
| GTGAGAGATTGCTGAACCAG+AGG | 0.624481 | 8.4:+74482764 | MS.gene37379:CDS |
| ATCAAGTCATTGATACACCT+GGG | 0.625389 | 8.4:+74482365 | MS.gene37379:CDS |
| AGCAGATCTGCATCTAGGAA+AGG | 0.625927 | 8.4:+74483399 | MS.gene37379:CDS |
| TCTCCAGGAACAACTTCATG+TGG | 0.626458 | 8.4:-74483543 | None:intergenic |
| AAAGCAATTAAACTTGCGAA+GGG | 0.631135 | 8.4:+74483594 | MS.gene37379:CDS |
| CCACCCTATGTAGAATGTCA+GGG | 0.631460 | 8.4:-74483092 | None:intergenic |
| ATCTAGGAAAGGTCGGAAGA+GGG | 0.633227 | 8.4:+74483410 | MS.gene37379:CDS |
| AGAAACAAGAATGCCAAGCG+TGG | 0.633691 | 8.4:+74483630 | MS.gene37379:CDS |
| GATCTGCATCTAGGAAAGGT+CGG | 0.639204 | 8.4:+74483403 | MS.gene37379:CDS |
| GTTGGATGGGTTATCTGAGG+AGG | 0.639325 | 8.4:+74482600 | MS.gene37379:CDS |
| CCAGGAACAACTTCATGTGG+TGG | 0.642177 | 8.4:-74483540 | None:intergenic |
| TGGTGGTCGAGAGACCGACC+TGG | 0.644261 | 8.4:-74483523 | None:intergenic |
| ACACCAACCGTTGTCCACAA+AGG | 0.647145 | 8.4:+74481803 | MS.gene37379:CDS |
| GTATTCTAATCCAACAACAT+CGG | 0.653178 | 8.4:+74483238 | MS.gene37379:CDS |
| AAGAGGGAGAGATCACCAGA+AGG | 0.653816 | 8.4:+74483426 | MS.gene37379:CDS |
| CGTTTCAAGGAAATTCGACA+AGG | 0.654192 | 8.4:+74483293 | MS.gene37379:CDS |
| GGATGAATGTCTCCAAGACG+AGG | 0.657114 | 8.4:-74481923 | None:intergenic |
| TCACAACAGAAAGAATGGGA+AGG | 0.666061 | 8.4:+74483325 | MS.gene37379:CDS |
| AAGACTTCAATTGGTCATGG+AGG | 0.667217 | 8.4:+74482661 | MS.gene37379:CDS |
| GCTTCATGTACTCTATAACA+AGG | 0.668511 | 8.4:+74481961 | MS.gene37379:CDS |
| AGATGGAACTGAATTGACAC+CGG | 0.673997 | 8.4:+74483176 | MS.gene37379:CDS |
| CTTAATACTCTGAAACAAAG+CGG | 0.685991 | 8.4:-74482521 | None:intergenic |
| TGAGAGATTGCTGAACCAGA+GGG | 0.687755 | 8.4:+74482765 | MS.gene37379:CDS |
| CAATTGGTCATGGAGGTGAG+GGG | 0.688118 | 8.4:+74482668 | MS.gene37379:CDS |
| GATCTGGAGGAAGAAAATGG+AGG | 0.758299 | 8.4:+74482955 | MS.gene37379:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACGGATTATAAGTATTTA+AGG | + | chr8.4:74482341-74482360 | MS.gene37379:CDS | 20.0% |
| !!! | TATGTTAAGTTGCTTAAATA+TGG | + | chr8.4:74482052-74482071 | MS.gene37379:CDS | 20.0% |
| !!! | TTTTATCAACAAGATTACTA+GGG | + | chr8.4:74482264-74482283 | MS.gene37379:CDS | 20.0% |
| ! | ATAATGCTTTCTCAAATTCA+TGG | - | chr8.4:74482995-74483014 | None:intergenic | 25.0% |
| !! | CTTTTATCAACAAGATTACT+AGG | + | chr8.4:74482263-74482282 | MS.gene37379:CDS | 25.0% |
| !!! | CTTTTCATGAAAATTAGTCT+GGG | - | chr8.4:74481879-74481898 | None:intergenic | 25.0% |
| !!! | TTTGAGAAAGCATTATATTC+TGG | + | chr8.4:74482999-74483018 | MS.gene37379:CDS | 25.0% |
| AAAGCAATTAAACTTGCGAA+GGG | + | chr8.4:74483594-74483613 | MS.gene37379:CDS | 30.0% | |
| AATACTGCTAGGAATCTTAT+TGG | + | chr8.4:74482013-74482032 | MS.gene37379:CDS | 30.0% | |
| ATAATATTCCGATCCTCAAA+TGG | - | chr8.4:74482403-74482422 | None:intergenic | 30.0% | |
| ATCAAAATAGTCCTGGTATT+TGG | - | chr8.4:74482214-74482233 | None:intergenic | 30.0% | |
| ATTCTGTTAATAGCCATAGA+AGG | - | chr8.4:74483375-74483394 | None:intergenic | 30.0% | |
| GTATTCTAATCCAACAACAT+CGG | + | chr8.4:74483238-74483257 | MS.gene37379:CDS | 30.0% | |
| TGTTCTTCTTGGATATATCA+GGG | + | chr8.4:74482470-74482489 | MS.gene37379:CDS | 30.0% | |
| TTGTTCTTCTTGGATATATC+AGG | + | chr8.4:74482469-74482488 | MS.gene37379:CDS | 30.0% | |
| ! | AGATAATCTGCCAGAAATTT+TGG | + | chr8.4:74483041-74483060 | MS.gene37379:CDS | 30.0% |
| ! | GCTTTTCATGAAAATTAGTC+TGG | - | chr8.4:74481880-74481899 | None:intergenic | 30.0% |
| ! | TCAACGAAATCTTTTCCATT+TGG | - | chr8.4:74481755-74481774 | None:intergenic | 30.0% |
| ! | TCTTTTTAATCCGATGTTGT+TGG | - | chr8.4:74483251-74483270 | None:intergenic | 30.0% |
| !! | CTTAATACTCTGAAACAAAG+CGG | - | chr8.4:74482524-74482543 | None:intergenic | 30.0% |
| !!! | GATGATGATTTTGAGATAGA+TGG | + | chr8.4:74483159-74483178 | MS.gene37379:CDS | 30.0% |
| AATACAAGTGCTTCGGTTTA+AGG | - | chr8.4:74483680-74483699 | None:intergenic | 35.0% | |
| ATCAAGTCATTGATACACCT+GGG | + | chr8.4:74482365-74482384 | MS.gene37379:CDS | 35.0% | |
| CAAAGCAATTAAACTTGCGA+AGG | + | chr8.4:74483593-74483612 | MS.gene37379:CDS | 35.0% | |
| CAGTTCACAACAGAAAGAAT+GGG | + | chr8.4:74483321-74483340 | MS.gene37379:CDS | 35.0% | |
| CTGGTATTTGGATCAATTGA+AGG | - | chr8.4:74482202-74482221 | None:intergenic | 35.0% | |
| CTTCAATTGATCCAAATACC+AGG | + | chr8.4:74482200-74482219 | MS.gene37379:CDS | 35.0% | |
| CTTGTCGAATTTCCTTGAAA+CGG | - | chr8.4:74483295-74483314 | None:intergenic | 35.0% | |
| GCTTCATGTACTCTATAACA+AGG | + | chr8.4:74481961-74481980 | MS.gene37379:CDS | 35.0% | |
| TATCAAGTCATTGATACACC+TGG | + | chr8.4:74482364-74482383 | MS.gene37379:CDS | 35.0% | |
| TTGAAGACTTCAATTGGTCA+TGG | + | chr8.4:74482658-74482677 | MS.gene37379:CDS | 35.0% | |
| TTGGTCAGATTAATACTGCT+AGG | + | chr8.4:74482002-74482021 | MS.gene37379:CDS | 35.0% | |
| TTGTGACCATCCAAAATTTC+TGG | - | chr8.4:74483054-74483073 | None:intergenic | 35.0% | |
| TTGTTGCACACAACAATCAA+AGG | - | chr8.4:74482565-74482584 | None:intergenic | 35.0% | |
| TTTCCAGAATACAAGTGCTT+CGG | - | chr8.4:74483687-74483706 | None:intergenic | 35.0% | |
| ! | AATCTGCCAGAAATTTTGGA+TGG | + | chr8.4:74483045-74483064 | MS.gene37379:CDS | 35.0% |
| ! | ATATTCTGGCTGATGATGAA+TGG | + | chr8.4:74483013-74483032 | MS.gene37379:CDS | 35.0% |
| ! | ATCTTTTCCATTTGGTACGA+CGG | - | chr8.4:74481747-74481766 | None:intergenic | 35.0% |
| ! | CTTTTCGCATGTAGAATTGT+CGG | - | chr8.4:74481847-74481866 | None:intergenic | 35.0% |
| ! | GGAGACATTCATCCTTTTTA+CGG | + | chr8.4:74481932-74481951 | MS.gene37379:CDS | 35.0% |
| !!! | ACCAGGACTATTTTGATTTG+TGG | + | chr8.4:74482217-74482236 | MS.gene37379:CDS | 35.0% |
| !!! | CCAGGACTATTTTGATTTGT+GGG | + | chr8.4:74482218-74482237 | MS.gene37379:CDS | 35.0% |
| AAAAACTGAGAAGGATCTGG+AGG | + | chr8.4:74482942-74482961 | MS.gene37379:CDS | 40.0% | |
| AAAAGAACTCTTCCCGACAT+TGG | - | chr8.4:74482248-74482267 | None:intergenic | 40.0% | |
| AAAGAACTCTTCCCGACATT+GGG | - | chr8.4:74482247-74482266 | None:intergenic | 40.0% | |
| AAATCAACGACTGTCTGAAC+AGG | + | chr8.4:74482812-74482831 | MS.gene37379:CDS | 40.0% | |
| AAGACTTCAATTGGTCATGG+AGG | + | chr8.4:74482661-74482680 | MS.gene37379:CDS | 40.0% | |
| AAGAGTTGGAAAGAGAGGAA+GGG | + | chr8.4:74483115-74483134 | MS.gene37379:CDS | 40.0% | |
| AAGATTACCGTCGTACCAAA+TGG | + | chr8.4:74481737-74481756 | MS.gene37379:CDS | 40.0% | |
| AAGGATCTGGAGGAAGAAAA+TGG | + | chr8.4:74482952-74482971 | MS.gene37379:CDS | 40.0% | |
| AGATGGAACTGAATTGACAC+CGG | + | chr8.4:74483176-74483195 | MS.gene37379:CDS | 40.0% | |
| AGCGGCAATATTGTTCTTCT+TGG | + | chr8.4:74482459-74482478 | MS.gene37379:CDS | 40.0% | |
| ATCTGAGGAGGATATGAAGT+TGG | + | chr8.4:74482612-74482631 | MS.gene37379:CDS | 40.0% | |
| ATTTCCTTGAAACGGTTGGT+CGG | - | chr8.4:74483287-74483306 | None:intergenic | 40.0% | |
| ATTTGTGGGTATCCCAATGT+CGG | + | chr8.4:74482232-74482251 | MS.gene37379:CDS | 40.0% | |
| CCCACAAATCAAAATAGTCC+TGG | - | chr8.4:74482221-74482240 | None:intergenic | 40.0% | |
| CGTTTCAAGGAAATTCGACA+AGG | + | chr8.4:74483293-74483312 | MS.gene37379:CDS | 40.0% | |
| GACTTAGTGGTAAACGCATA+CGG | - | chr8.4:74482307-74482326 | None:intergenic | 40.0% | |
| GAGAAAAACTGAGAAGGATC+TGG | + | chr8.4:74482939-74482958 | MS.gene37379:CDS | 40.0% | |
| GATCATTACAAGCTTGCACT+TGG | + | chr8.4:74481983-74482002 | MS.gene37379:CDS | 40.0% | |
| GCAGTTCACAACAGAAAGAA+TGG | + | chr8.4:74483320-74483339 | MS.gene37379:CDS | 40.0% | |
| GGAGAAGAGAAAAACTGAGA+AGG | + | chr8.4:74482933-74482952 | MS.gene37379:CDS | 40.0% | |
| GTACTGTGCTTAAGAGGATT+GGG | + | chr8.4:74482128-74482147 | MS.gene37379:CDS | 40.0% | |
| GTGAAATTGCATAGCCTTTG+TGG | - | chr8.4:74481820-74481839 | None:intergenic | 40.0% | |
| TCACAACAGAAAGAATGGGA+AGG | + | chr8.4:74483325-74483344 | MS.gene37379:CDS | 40.0% | |
| TCATCTTAATCTCAACCCTC+TGG | - | chr8.4:74482783-74482802 | None:intergenic | 40.0% | |
| TCGAATTTCCTTGAAACGGT+TGG | - | chr8.4:74483291-74483310 | None:intergenic | 40.0% | |
| TGAAGCAGATCACCGTAAAA+AGG | - | chr8.4:74481947-74481966 | None:intergenic | 40.0% | |
| TGACCCTGACATTCTACATA+GGG | + | chr8.4:74483089-74483108 | MS.gene37379:CDS | 40.0% | |
| TGTACTGTGCTTAAGAGGAT+TGG | + | chr8.4:74482127-74482146 | MS.gene37379:CDS | 40.0% | |
| TGTTCCAAATACGCCAAACT+CGG | - | chr8.4:74482154-74482173 | None:intergenic | 40.0% | |
| TTGACCCTGACATTCTACAT+AGG | + | chr8.4:74483088-74483107 | MS.gene37379:CDS | 40.0% | |
| TTGGATATATCAGGGTCTTG+TGG | + | chr8.4:74482478-74482497 | MS.gene37379:CDS | 40.0% | |
| ! | AAACCGAAGCACTTGTATTC+TGG | + | chr8.4:74483681-74483700 | MS.gene37379:CDS | 40.0% |
| ! | AAGAGGCTTTAGCTGAGATT+AGG | + | chr8.4:74483205-74483224 | MS.gene37379:CDS | 40.0% |
| ! | ACGAGGAAACTCATCGATTA+TGG | - | chr8.4:74481909-74481928 | None:intergenic | 40.0% |
| ! | AGTTTTTCTCTTCTCCTCAG+CGG | - | chr8.4:74482929-74482948 | None:intergenic | 40.0% |
| ! | ATACACCTGGGATTTTGGAT+AGG | + | chr8.4:74482377-74482396 | MS.gene37379:CDS | 40.0% |
| ! | CATTGATACACCTGGGATTT+TGG | + | chr8.4:74482372-74482391 | MS.gene37379:CDS | 40.0% |
| ! | CTTTAGCTTCCAAAACTGCT+GGG | - | chr8.4:74482894-74482913 | None:intergenic | 40.0% |
| ! | GATTTTGGATAGGCCATTTG+AGG | + | chr8.4:74482387-74482406 | MS.gene37379:CDS | 40.0% |
| ! | GGCATTCTTGTTTCTCTTCT+TGG | - | chr8.4:74483625-74483644 | None:intergenic | 40.0% |
| ! | TCTTTTGAGCAGAATCCCTA+AGG | - | chr8.4:74483572-74483591 | None:intergenic | 40.0% |
| ! | TGGATATATCAGGGTCTTGT+GGG | + | chr8.4:74482479-74482498 | MS.gene37379:CDS | 40.0% |
| ! | TTTAGCTTCCAAAACTGCTG+GGG | - | chr8.4:74482893-74482912 | None:intergenic | 40.0% |
| !! | GAAGCGTTGAAGACTTCAAT+TGG | + | chr8.4:74482652-74482671 | MS.gene37379:CDS | 40.0% |
| AAAACTGCTGGGGGAATACA+CGG | - | chr8.4:74482883-74482902 | None:intergenic | 45.0% | |
| AATGGCCTATCCAAAATCCC+AGG | - | chr8.4:74482385-74482404 | None:intergenic | 45.0% | |
| ACCACTAAGTCGCTGTTTGT+GGG | + | chr8.4:74482316-74482335 | MS.gene37379:CDS | 45.0% | |
| AGAAACAAGAATGCCAAGCG+TGG | + | chr8.4:74483630-74483649 | MS.gene37379:CDS | 45.0% | |
| AGAAGGAAGAAACGATGGGA+TGG | + | chr8.4:74483443-74483462 | MS.gene37379:CDS | 45.0% | |
| AGCAGATCTGCATCTAGGAA+AGG | + | chr8.4:74483399-74483418 | MS.gene37379:CDS | 45.0% | |
| ATCCCATCGTTTCTTCCTTC+TGG | - | chr8.4:74483444-74483463 | None:intergenic | 45.0% | |
| ATCGATGAGTTTCCTCGTCT+TGG | + | chr8.4:74481911-74481930 | MS.gene37379:CDS | 45.0% | |
| ATCTAGGAAAGGTCGGAAGA+GGG | + | chr8.4:74483410-74483429 | MS.gene37379:CDS | 45.0% | |
| CAAGGAAATTCGACAAGGAC+AGG | + | chr8.4:74483298-74483317 | MS.gene37379:CDS | 45.0% | |
| CACCAGAAGGAAGAAACGAT+GGG | + | chr8.4:74483439-74483458 | MS.gene37379:CDS | 45.0% | |
| CATGAAGTTGTTCCTGGAGA+AGG | + | chr8.4:74483546-74483565 | MS.gene37379:CDS | 45.0% | |
| CCACCCTATGTAGAATGTCA+GGG | - | chr8.4:74483095-74483114 | None:intergenic | 45.0% | |
| GAAGAGTTGGAAAGAGAGGA+AGG | + | chr8.4:74483114-74483133 | MS.gene37379:CDS | 45.0% | |
| GATCTGCATCTAGGAAAGGT+CGG | + | chr8.4:74483403-74483422 | MS.gene37379:CDS | 45.0% | |
| GATCTGGAGGAAGAAAATGG+AGG | + | chr8.4:74482955-74482974 | MS.gene37379:CDS | 45.0% | |
| GGATGTGTACTGTGCTTAAG+AGG | + | chr8.4:74482122-74482141 | MS.gene37379:CDS | 45.0% | |
| GTATCGCTGTAAGTGCTTGA+AGG | + | chr8.4:74482084-74482103 | MS.gene37379:CDS | 45.0% | |
| TACCACTAAGTCGCTGTTTG+TGG | + | chr8.4:74482315-74482334 | MS.gene37379:CDS | 45.0% | |
| TCAATTGGTCATGGAGGTGA+GGG | + | chr8.4:74482667-74482686 | MS.gene37379:CDS | 45.0% | |
| TCACCAGAAGGAAGAAACGA+TGG | + | chr8.4:74483438-74483457 | MS.gene37379:CDS | 45.0% | |
| TCCACCCTATGTAGAATGTC+AGG | - | chr8.4:74483096-74483115 | None:intergenic | 45.0% | |
| TCCTCAGATAACCCATCCAA+CGG | - | chr8.4:74482601-74482620 | None:intergenic | 45.0% | |
| TCTACATAGGGTGGAAGAGT+TGG | + | chr8.4:74483101-74483120 | MS.gene37379:CDS | 45.0% | |
| TCTCCAGGAACAACTTCATG+TGG | - | chr8.4:74483546-74483565 | None:intergenic | 45.0% | |
| TCTTGGGCTTGATCCTTCTA+TGG | + | chr8.4:74483359-74483378 | MS.gene37379:CDS | 45.0% | |
| TGAGAGATTGCTGAACCAGA+GGG | + | chr8.4:74482765-74482784 | MS.gene37379:CDS | 45.0% | |
| TGCATAGCCTTTGTGGACAA+CGG | - | chr8.4:74481813-74481832 | None:intergenic | 45.0% | |
| TGGAAAGAGAGGAAGGGTTA+AGG | + | chr8.4:74483121-74483140 | MS.gene37379:CDS | 45.0% | |
| TGGATAGGCCATTTGAGGAT+CGG | + | chr8.4:74482392-74482411 | MS.gene37379:CDS | 45.0% | |
| TGGGTATACTATTGCTCAGC+AGG | + | chr8.4:74482498-74482517 | MS.gene37379:CDS | 45.0% | |
| TTAGCTTCCAAAACTGCTGG+GGG | - | chr8.4:74482892-74482911 | None:intergenic | 45.0% | |
| TTCAATTGGTCATGGAGGTG+AGG | + | chr8.4:74482666-74482685 | MS.gene37379:CDS | 45.0% | |
| TTTGTGGGTATCCCAATGTC+GGG | + | chr8.4:74482233-74482252 | MS.gene37379:CDS | 45.0% | |
| ! | AACGGTTGGTGTTTGACGTT+GGG | - | chr8.4:74481795-74481814 | None:intergenic | 45.0% |
| ! | AGGCTTTAGCTGAGATTAGG+AGG | + | chr8.4:74483208-74483227 | MS.gene37379:CDS | 45.0% |
| ! | GAGTTTGGCGTATTTGGAAC+AGG | + | chr8.4:74482153-74482172 | MS.gene37379:CDS | 45.0% |
| ! | GCTTTAGCTTCCAAAACTGC+TGG | - | chr8.4:74482895-74482914 | None:intergenic | 45.0% |
| ! | TGGCGTATTTGGAACAGGTT+AGG | + | chr8.4:74482158-74482177 | MS.gene37379:CDS | 45.0% |
| !! | ATGAGTGCGTTGACTGAAGA+AGG | + | chr8.4:74482715-74482734 | MS.gene37379:CDS | 45.0% |
| !! | TATTCTGGAAAGCGCTCCAA+AGG | + | chr8.4:74483696-74483715 | MS.gene37379:CDS | 45.0% |
| AACCACGTGACCAGAAGGAA+AGG | + | chr8.4:74482854-74482873 | MS.gene37379:CDS | 50.0% | |
| AAGAGAGGAAGGGTTAAGGC+AGG | + | chr8.4:74483125-74483144 | MS.gene37379:CDS | 50.0% | |
| AAGAGGGAGAGATCACCAGA+AGG | + | chr8.4:74483426-74483445 | MS.gene37379:CDS | 50.0% | |
| ACACCAACCGTTGTCCACAA+AGG | + | chr8.4:74481803-74481822 | MS.gene37379:CDS | 50.0% | |
| ACCCACAAACAGCGACTTAG+TGG | - | chr8.4:74482320-74482339 | None:intergenic | 50.0% | |
| AGGTTAGGCAGCATATGGCT+AGG | + | chr8.4:74482173-74482192 | MS.gene37379:CDS | 50.0% | |
| ATCACTGTCTCGTTCCAGGT+CGG | + | chr8.4:74483509-74483528 | MS.gene37379:CDS | 50.0% | |
| ATTGACACCGGAACAGCAAG+AGG | + | chr8.4:74483188-74483207 | MS.gene37379:CDS | 50.0% | |
| CAATTGGTCATGGAGGTGAG+GGG | + | chr8.4:74482668-74482687 | MS.gene37379:CDS | 50.0% | |
| CATCTAGGAAAGGTCGGAAG+AGG | + | chr8.4:74483409-74483428 | MS.gene37379:CDS | 50.0% | |
| CCACCACATGAAGTTGTTCC+TGG | + | chr8.4:74483540-74483559 | MS.gene37379:CDS | 50.0% | |
| CCAGGAACAACTTCATGTGG+TGG | - | chr8.4:74483543-74483562 | None:intergenic | 50.0% | |
| CCCTGACATTCTACATAGGG+TGG | + | chr8.4:74483092-74483111 | MS.gene37379:CDS | 50.0% | |
| CTGGTTCAGCAATCTCTCAC+AGG | - | chr8.4:74482764-74482783 | None:intergenic | 50.0% | |
| GCTCCAAAGGAAAGACAGAC+AGG | + | chr8.4:74483709-74483728 | MS.gene37379:CDS | 50.0% | |
| GCTTGAAGGTTGCTGCTCTT+GGG | + | chr8.4:74482098-74482117 | MS.gene37379:CDS | 50.0% | |
| GGAACAGGTTAGGCAGCATA+TGG | + | chr8.4:74482168-74482187 | MS.gene37379:CDS | 50.0% | |
| GGATGAATGTCTCCAAGACG+AGG | - | chr8.4:74481926-74481945 | None:intergenic | 50.0% | |
| GGTGGAAGAGTTGGAAAGAG+AGG | + | chr8.4:74483110-74483129 | MS.gene37379:CDS | 50.0% | |
| GTAGATCACTGTCTCGTTCC+AGG | + | chr8.4:74483505-74483524 | MS.gene37379:CDS | 50.0% | |
| GTCGCTGTTTGTGGGTCATA+CGG | + | chr8.4:74482324-74482343 | MS.gene37379:CDS | 50.0% | |
| GTGAGAGATTGCTGAACCAG+AGG | + | chr8.4:74482764-74482783 | MS.gene37379:CDS | 50.0% | |
| TAAGAGGATTGGGCCGAGTT+TGG | + | chr8.4:74482138-74482157 | MS.gene37379:CDS | 50.0% | |
| TAGCCTTTGTGGACAACGGT+TGG | - | chr8.4:74481809-74481828 | None:intergenic | 50.0% | |
| TCCTTCTGGTCACGTGGTTT+CGG | - | chr8.4:74482853-74482872 | None:intergenic | 50.0% | |
| TCTATCAGCTTCTCCACGCT+TGG | - | chr8.4:74483646-74483665 | None:intergenic | 50.0% | |
| TGCGTAGCAGATCTGCATCT+AGG | + | chr8.4:74483394-74483413 | MS.gene37379:CDS | 50.0% | |
| TGCTCTTGCGCATTTGAGAG+CGG | + | chr8.4:74482441-74482460 | MS.gene37379:CDS | 50.0% | |
| TGCTTGAAGGTTGCTGCTCT+TGG | + | chr8.4:74482097-74482116 | MS.gene37379:CDS | 50.0% | |
| TGTTCCTGGAGAAGGCCTTA+GGG | + | chr8.4:74483554-74483573 | MS.gene37379:CDS | 50.0% | |
| TTGTTCCTGGAGAAGGCCTT+AGG | + | chr8.4:74483553-74483572 | MS.gene37379:CDS | 50.0% | |
| ! | CAACGGTTGGTGTTTGACGT+TGG | - | chr8.4:74481796-74481815 | None:intergenic | 50.0% |
| ! | CTGATTTGCAGCCGTTGGAT+GGG | + | chr8.4:74482587-74482606 | MS.gene37379:CDS | 50.0% |
| ! | GTGTATTCCCCCAGCAGTTT+TGG | + | chr8.4:74482882-74482901 | MS.gene37379:CDS | 50.0% |
| !! | ACTGATTTGCAGCCGTTGGA+TGG | + | chr8.4:74482586-74482605 | MS.gene37379:CDS | 50.0% |
| !! | CAAGACTGATTTGCAGCCGT+TGG | + | chr8.4:74482582-74482601 | MS.gene37379:CDS | 50.0% |
| !! | CTGAGACGCTGTTTCTTGCT+AGG | - | chr8.4:74483486-74483505 | None:intergenic | 50.0% |
| !! | GCTAAAGCCTCTTGCTGTTC+CGG | - | chr8.4:74483198-74483217 | None:intergenic | 50.0% |
| !! | GTTGGATGGGTTATCTGAGG+AGG | + | chr8.4:74482600-74482619 | MS.gene37379:CDS | 50.0% |
| AGAGCCGACCAACCGTTTCA+AGG | + | chr8.4:74483280-74483299 | MS.gene37379:CDS | 55.0% | |
| GAAGGCAGCTGTCGTCTCTT+GGG | + | chr8.4:74483343-74483362 | MS.gene37379:CDS | 55.0% | |
| GAATCCCTAAGGCCTTCTCC+AGG | - | chr8.4:74483561-74483580 | None:intergenic | 55.0% | |
| GCGCCTGTCTGTCTTTCCTT+TGG | - | chr8.4:74483715-74483734 | None:intergenic | 55.0% | |
| TACACGGAGGCCTTTCCTTC+TGG | - | chr8.4:74482867-74482886 | None:intergenic | 55.0% | |
| TCCGAAACCACGTGACCAGA+AGG | + | chr8.4:74482849-74482868 | MS.gene37379:CDS | 55.0% | |
| TGAAGGTTGCTGCTCTTGGG+AGG | + | chr8.4:74482101-74482120 | MS.gene37379:CDS | 55.0% | |
| TGGGCCGAGTTTGGCGTATT+TGG | + | chr8.4:74482147-74482166 | MS.gene37379:CDS | 55.0% | |
| ! | GAGGAAGAAAATGGAGGCGC+TGG | + | chr8.4:74482961-74482980 | MS.gene37379:CDS | 55.0% |
| !! | GCCGTTGGATGGGTTATCTG+AGG | + | chr8.4:74482597-74482616 | MS.gene37379:CDS | 55.0% |
| ACTGCTGGGGGAATACACGG+AGG | - | chr8.4:74482880-74482899 | None:intergenic | 60.0% | |
| AGCTAAGCAAGCAGCCGCTG+AGG | + | chr8.4:74482912-74482931 | MS.gene37379:CDS | 60.0% | |
| GGAAGGCAGCTGTCGTCTCT+TGG | + | chr8.4:74483342-74483361 | MS.gene37379:CDS | 60.0% | |
| GGCCTTTCCTTCTGGTCACG+TGG | - | chr8.4:74482859-74482878 | None:intergenic | 60.0% | |
| TGGTCATGGAGGTGAGGGGA+CGG | + | chr8.4:74482672-74482691 | MS.gene37379:CDS | 60.0% | |
| TGGTGGTCGAGAGACCGACC+TGG | - | chr8.4:74483526-74483545 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 74481716 | 74483737 | 74481716 | ID=MS.gene37379 |
| chr8.4 | mRNA | 74481716 | 74483737 | 74481716 | ID=MS.gene37379.t1;Parent=MS.gene37379 |
| chr8.4 | exon | 74481716 | 74483737 | 74481716 | ID=MS.gene37379.t1.exon1;Parent=MS.gene37379.t1 |
| chr8.4 | CDS | 74481716 | 74483737 | 74481716 | ID=cds.MS.gene37379.t1;Parent=MS.gene37379.t1 |
| Gene Sequence |
| Protein sequence |
