Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30325.t1 | RHN39333.1 | 99.6 | 673 | 3 | 0 | 1 | 673 | 1 | 673 | 0.00E+00 | 1208 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30325.t1 | Q9C6I8 | 79.6 | 675 | 132 | 2 | 1 | 673 | 1 | 671 | 3.9e-279 | 961.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30325.t1 | A0A396GF36 | 99.6 | 673 | 3 | 0 | 1 | 673 | 1 | 673 | 0.0e+00 | 1208.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene30325 | 0.826118 | 3.23E-54 | -1.69E-46 |
| MS.gene050838 | MS.gene30325 | 0.82665 | 2.42E-54 | -1.69E-46 |
| MS.gene050945 | MS.gene30325 | 0.810178 | 1.31E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene30325 | 0.842195 | 3.00E-58 | -1.69E-46 |
| MS.gene051746 | MS.gene30325 | 0.804821 | 1.80E-49 | -1.69E-46 |
| MS.gene051850 | MS.gene30325 | 0.800301 | 1.54E-48 | -1.69E-46 |
| MS.gene05188 | MS.gene30325 | 0.81972 | 1.00E-52 | -1.69E-46 |
| MS.gene052947 | MS.gene30325 | 0.83224 | 1.06E-55 | -1.69E-46 |
| MS.gene053122 | MS.gene30325 | 0.813195 | 2.89E-51 | -1.69E-46 |
| MS.gene053443 | MS.gene30325 | 0.817234 | 3.67E-52 | -1.69E-46 |
| MS.gene054413 | MS.gene30325 | 0.803926 | 2.76E-49 | -1.69E-46 |
| MS.gene055765 | MS.gene30325 | 0.809336 | 1.99E-50 | -1.69E-46 |
| MS.gene056075 | MS.gene30325 | 0.836819 | 7.48E-57 | -1.69E-46 |
| MS.gene056403 | MS.gene30325 | 0.808475 | 3.04E-50 | -1.69E-46 |
| MS.gene056605 | MS.gene30325 | 0.818797 | 1.63E-52 | -1.69E-46 |
| MS.gene05689 | MS.gene30325 | 0.835355 | 1.76E-56 | -1.69E-46 |
| MS.gene057094 | MS.gene30325 | 0.82893 | 6.83E-55 | -1.69E-46 |
| MS.gene058030 | MS.gene30325 | 0.823587 | 1.28E-53 | -1.69E-46 |
| MS.gene059146 | MS.gene30325 | 0.83014 | 3.47E-55 | -1.69E-46 |
| MS.gene059726 | MS.gene30325 | 0.810665 | 1.03E-50 | -1.69E-46 |
| MS.gene06001 | MS.gene30325 | 0.805287 | 1.44E-49 | -1.69E-46 |
| MS.gene06011 | MS.gene30325 | 0.820462 | 6.77E-53 | -1.69E-46 |
| MS.gene060763 | MS.gene30325 | 0.875989 | 1.99E-68 | -1.69E-46 |
| MS.gene060830 | MS.gene30325 | 0.83023 | 3.30E-55 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30325.t1 | MTR_8g018150 | 99.406 | 673 | 4 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1378 |
| MS.gene30325.t1 | MTR_2g078050 | 95.542 | 673 | 7 | 1 | 1 | 673 | 1 | 650 | 0.0 | 1314 |
| MS.gene30325.t1 | MTR_2g078050 | 98.696 | 537 | 7 | 0 | 137 | 673 | 1 | 537 | 0.0 | 1087 |
| MS.gene30325.t1 | MTR_7g450930 | 28.387 | 310 | 195 | 5 | 62 | 361 | 49 | 341 | 6.34e-32 | 127 |
| MS.gene30325.t1 | MTR_7g450930 | 28.387 | 310 | 195 | 5 | 62 | 361 | 136 | 428 | 6.11e-31 | 126 |
| MS.gene30325.t1 | MTR_7g450930 | 28.179 | 291 | 182 | 5 | 62 | 342 | 136 | 409 | 1.71e-29 | 122 |
| MS.gene30325.t1 | MTR_2g082240 | 62.500 | 112 | 36 | 3 | 566 | 673 | 39 | 148 | 1.15e-28 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30325.t1 | AT1G50920 | 77.286 | 678 | 142 | 5 | 1 | 673 | 1 | 671 | 0.0 | 1071 |
| MS.gene30325.t1 | AT1G10300 | 70.294 | 680 | 173 | 6 | 1 | 673 | 30 | 687 | 0.0 | 929 |
| MS.gene30325.t1 | AT1G10300 | 70.294 | 680 | 173 | 6 | 1 | 673 | 30 | 687 | 0.0 | 929 |
| MS.gene30325.t1 | AT1G10300 | 70.294 | 680 | 173 | 6 | 1 | 673 | 1 | 658 | 0.0 | 928 |
| MS.gene30325.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 76 | 362 | 1.69e-30 | 125 |
| MS.gene30325.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 69 | 355 | 3.07e-30 | 124 |
| MS.gene30325.t1 | AT1G80770 | 28.448 | 232 | 166 | 0 | 62 | 293 | 51 | 282 | 3.98e-30 | 122 |
| MS.gene30325.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 92 | 378 | 4.16e-30 | 124 |
| MS.gene30325.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 107 | 393 | 1.01e-29 | 123 |
| MS.gene30325.t1 | AT1G80770 | 27.241 | 290 | 206 | 2 | 6 | 293 | 123 | 409 | 2.32e-29 | 122 |
| MS.gene30325.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 6 | 184 | 4.59e-20 | 90.1 |
| MS.gene30325.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 7.34e-20 | 89.7 |
| MS.gene30325.t1 | AT3G23860 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 7.34e-20 | 89.7 |
Find 158 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACAAGTGCTTTGGTTTA+AGG | 0.090617 | 8.1:+79943676 | None:intergenic |
| GGCATTCTTGTTTCTCTTCT+TGG | 0.114794 | 8.1:+79943731 | None:intergenic |
| CATTGATACACCTGGGATTT+TGG | 0.122171 | 8.1:-79944981 | MS.gene30325:CDS |
| AGATAATCTGCCAGAAATTT+TGG | 0.147637 | 8.1:-79944312 | MS.gene30325:CDS |
| ATCAAAATAGTCCTGGTATT+TGG | 0.197584 | 8.1:+79945142 | None:intergenic |
| TTGTTCTTCTTGGATATATC+AGG | 0.214420 | 8.1:-79944884 | MS.gene30325:CDS |
| ATACGGATTATAAGTATTTA+AGG | 0.228633 | 8.1:-79945012 | MS.gene30325:CDS |
| AAACCAAAGCACTTGTATTC+TGG | 0.228894 | 8.1:-79943672 | MS.gene30325:CDS |
| AATACTGCTAGGAATCTTAT+TGG | 0.238602 | 8.1:-79945340 | MS.gene30325:CDS |
| TGGACCGAGTTTGGCGTATT+TGG | 0.240694 | 8.1:-79945206 | MS.gene30325:CDS |
| TTGTGACCATCCAAAATTTC+TGG | 0.250913 | 8.1:+79944302 | None:intergenic |
| AAGCAACTTAACATAATCTT+TGG | 0.271321 | 8.1:+79945309 | None:intergenic |
| TCCTTCTGGTCACGTGGTTT+CGG | 0.274078 | 8.1:+79944503 | None:intergenic |
| AGCGGCAATATTGTTCTTCT+TGG | 0.291223 | 8.1:-79944894 | MS.gene30325:CDS |
| TACACGGAGGCCTTTCCTTC+TGG | 0.303728 | 8.1:+79944489 | None:intergenic |
| TATGTTAAGTTGCTTAAATA+TGG | 0.304848 | 8.1:-79945301 | MS.gene30325:CDS |
| ATAATGCTTTCTCAAATTCA+TGG | 0.310089 | 8.1:+79944361 | None:intergenic |
| TCTTGGGCTTGATCCTTCTA+TGG | 0.315254 | 8.1:-79943994 | MS.gene30325:CDS |
| ATCCCATCGTTTCTTCCTTC+TGG | 0.317491 | 8.1:+79943912 | None:intergenic |
| TGCTTGAAGGTTGCTGCTCT+TGG | 0.323045 | 8.1:-79945256 | MS.gene30325:CDS |
| TTTGAGAAAGCATTATATTC+TGG | 0.326466 | 8.1:-79944354 | MS.gene30325:CDS |
| GCTAAAGCCTCTTGCTGTTC+CGG | 0.334792 | 8.1:+79944158 | None:intergenic |
| GCGCCTGTCTGTCTTTCCTT+TGG | 0.337022 | 8.1:+79943641 | None:intergenic |
| GTAGATCACTGTCTCGTTCC+AGG | 0.337515 | 8.1:-79943848 | MS.gene30325:CDS |
| AAGGATCTGGAGGAAGAAAA+TGG | 0.337588 | 8.1:-79944401 | MS.gene30325:CDS |
| TGAAGCAGATCACCGTAAAA+AGG | 0.347243 | 8.1:+79945409 | None:intergenic |
| TAAGAGGATTGGACCGAGTT+TGG | 0.351236 | 8.1:-79945215 | MS.gene30325:CDS |
| TCGATGAGTTTCCTCGTCTT+GGG | 0.355491 | 8.1:-79945441 | MS.gene30325:CDS |
| GGAAGGCAGCTGTCGTCTCT+TGG | 0.361895 | 8.1:-79944011 | MS.gene30325:CDS |
| TTGTTCCTGGAGAAGGCCTT+AGG | 0.365376 | 8.1:-79943800 | MS.gene30325:CDS |
| ACGAGGAAACTCATCGATTA+TGG | 0.370750 | 8.1:+79945447 | None:intergenic |
| CCACCACATGAAGTTGTTCC+TGG | 0.371926 | 8.1:-79943813 | MS.gene30325:CDS |
| TGGATATATCAGGGTCTTGT+GGG | 0.379230 | 8.1:-79944874 | MS.gene30325:CDS |
| TCCACCCTATGTAGAATGTC+AGG | 0.383879 | 8.1:+79944260 | None:intergenic |
| TGGAAAGAGAGGAAGGGTTA+AGG | 0.386417 | 8.1:-79944232 | MS.gene30325:CDS |
| ATCGATGAGTTTCCTCGTCT+TGG | 0.401400 | 8.1:-79945442 | MS.gene30325:CDS |
| TACCACTAAGTCGTTGTTTG+TGG | 0.410993 | 8.1:-79945038 | MS.gene30325:CDS |
| AACGGTTGGTGTTTGACGTT+GGG | 0.415669 | 8.1:+79945561 | None:intergenic |
| GCTTGAAGGTTGCTGCTCTT+GGG | 0.424098 | 8.1:-79945255 | MS.gene30325:CDS |
| GCTTTAGCTTCCAAAACTGC+TGG | 0.426248 | 8.1:+79944461 | None:intergenic |
| TTGGATATATCAGGGTCTTG+TGG | 0.430521 | 8.1:-79944875 | MS.gene30325:CDS |
| TTTCCAGAATACAAGTGCTT+TGG | 0.430988 | 8.1:+79943669 | None:intergenic |
| AAGAGGCTTTAGCTGAGATT+AGG | 0.440739 | 8.1:-79944148 | MS.gene30325:CDS |
| TGGCGTATTTGGAGCAGGTT+AGG | 0.444195 | 8.1:-79945195 | MS.gene30325:CDS |
| AAAGAACTCTTCCCGACATT+GGG | 0.444776 | 8.1:+79945109 | None:intergenic |
| ACCCACAAACAACGACTTAG+TGG | 0.446803 | 8.1:+79945036 | None:intergenic |
| GTCGTTGTTTGTGGGTCATA+CGG | 0.447797 | 8.1:-79945029 | MS.gene30325:CDS |
| GAAGCGTTGAAGACTTCAAT+TGG | 0.448210 | 8.1:-79944701 | MS.gene30325:CDS |
| GAAGAGTTGGAAAGAGAGGA+AGG | 0.448886 | 8.1:-79944239 | MS.gene30325:CDS |
| GAAGGCAGCTGTCGTCTCTT+GGG | 0.448895 | 8.1:-79944010 | MS.gene30325:CDS |
| TGGGTATACTATTGCTCAGC+AGG | 0.456682 | 8.1:-79944855 | MS.gene30325:CDS |
| GCAGTTCACAACAGAAAGAA+TGG | 0.457219 | 8.1:-79944033 | MS.gene30325:CDS |
| GGAGCAGGTTAGGCAGCATA+TGG | 0.458049 | 8.1:-79945185 | MS.gene30325:CDS |
| AAATCAACGACTGTCTGAAC+AGG | 0.462069 | 8.1:-79944541 | MS.gene30325:CDS |
| GGTGGAAGAGTTGGAAAGAG+AGG | 0.462216 | 8.1:-79944243 | MS.gene30325:CDS |
| CTGAGACGCTGTTTCTTGCT+AGG | 0.462261 | 8.1:+79943870 | None:intergenic |
| GGATGTGTACTGTGCTTAAG+AGG | 0.463986 | 8.1:-79945231 | MS.gene30325:CDS |
| GTATCGCTGTAAGTGCTTGA+AGG | 0.470038 | 8.1:-79945269 | MS.gene30325:CDS |
| ATCTGAGGAGGATATGAAGT+TGG | 0.470979 | 8.1:-79944741 | MS.gene30325:CDS |
| TCGAATTTCCTTGAAACGGT+TGG | 0.471228 | 8.1:+79944065 | None:intergenic |
| AGAGCCGACCAACCGTTTCA+AGG | 0.471571 | 8.1:-79944073 | MS.gene30325:CDS |
| AAGATTACCGTCGTACCAAA+TGG | 0.472320 | 8.1:-79945616 | MS.gene30325:CDS |
| ATTCTGTTAATAGCCATAGA+AGG | 0.473599 | 8.1:+79943981 | None:intergenic |
| CAAGGAAATTCGACAAGGAC+AGG | 0.474490 | 8.1:-79944055 | MS.gene30325:CDS |
| CTTGTCGAATTTCCTTGAAA+CGG | 0.475481 | 8.1:+79944061 | None:intergenic |
| CTGGTATTTGGATCAATTGA+AGG | 0.475786 | 8.1:+79945154 | None:intergenic |
| ACTGATTTGCAGCCGTTGGA+TGG | 0.477148 | 8.1:-79944767 | MS.gene30325:CDS |
| AAAAGAACTCTTCCCGACAT+TGG | 0.486940 | 8.1:+79945108 | None:intergenic |
| CAAGACTGATTTGCAGCCGT+TGG | 0.487122 | 8.1:-79944771 | MS.gene30325:CDS |
| CTTTAGCTTCCAAAACTGCT+GGG | 0.494188 | 8.1:+79944462 | None:intergenic |
| GAGTTTGGCGTATTTGGAGC+AGG | 0.498174 | 8.1:-79945200 | MS.gene30325:CDS |
| ATAATATTCCGATCCTCAAA+CGG | 0.499586 | 8.1:+79944953 | None:intergenic |
| ACCACTAAGTCGTTGTTTGT+GGG | 0.504320 | 8.1:-79945037 | MS.gene30325:CDS |
| TGTTCCTGGAGAAGGCCTTA+GGG | 0.506108 | 8.1:-79943799 | MS.gene30325:CDS |
| TCTACATAGGGTGGAAGAGT+TGG | 0.506957 | 8.1:-79944252 | MS.gene30325:CDS |
| TCATCTTAATCTCAACCCTC+TGG | 0.510875 | 8.1:+79944573 | None:intergenic |
| TCTATCAGCTTCTCCACGCT+TGG | 0.514227 | 8.1:+79943710 | None:intergenic |
| TGGATAGGCCGTTTGAGGAT+CGG | 0.514877 | 8.1:-79944961 | MS.gene30325:CDS |
| TTTGTGGGTATCCCAATGTC+GGG | 0.518939 | 8.1:-79945120 | MS.gene30325:CDS |
| CTGATTTGCAGCCGTTGGAT+GGG | 0.521692 | 8.1:-79944766 | MS.gene30325:CDS |
| CATGAAGTTGTTCCTGGAGA+AGG | 0.522867 | 8.1:-79943807 | MS.gene30325:CDS |
| GAGGAAGAAAATGGAGGCGC+TGG | 0.523495 | 8.1:-79944392 | MS.gene30325:CDS |
| AGGCTTTAGCTGAGATTAGG+AGG | 0.525671 | 8.1:-79944145 | MS.gene30325:CDS |
| TGTACTGTGCTTAAGAGGAT+TGG | 0.532717 | 8.1:-79945226 | MS.gene30325:CDS |
| GATCATTACAAGCTTGCACT+TGG | 0.533978 | 8.1:-79945370 | MS.gene30325:CDS |
| TTGAAGACTTCAATTGGTCA+TGG | 0.534533 | 8.1:-79944695 | MS.gene30325:CDS |
| ATATTCTGGCTGATGATGAA+TGG | 0.535908 | 8.1:-79944340 | MS.gene30325:CDS |
| CATCTAGGAAAGGTCGGAAG+AGG | 0.537520 | 8.1:-79943944 | MS.gene30325:CDS |
| GGCCTTTCCTTCTGGTCACG+TGG | 0.537839 | 8.1:+79944497 | None:intergenic |
| CAGTTCACAACAGAAAGAAT+GGG | 0.538822 | 8.1:-79944032 | MS.gene30325:CDS |
| TGTTCTTCTTGGATATATCA+GGG | 0.539338 | 8.1:-79944883 | MS.gene30325:CDS |
| CTGGTTCAGCAATCTCTCAC+AGG | 0.539812 | 8.1:+79944592 | None:intergenic |
| ATTTGTGGGTATCCCAATGT+CGG | 0.540169 | 8.1:-79945121 | MS.gene30325:CDS |
| TGGTCATGGAGGTGAGGGGA+CGG | 0.540574 | 8.1:-79944681 | MS.gene30325:CDS |
| GCTCCAAAGGAAAGACAGAC+AGG | 0.543840 | 8.1:-79943644 | MS.gene30325:CDS |
| CAACGGTTGGTGTTTGACGT+TGG | 0.544383 | 8.1:+79945560 | None:intergenic |
| TTGACCCTGACATTCTACAT+AGG | 0.545444 | 8.1:-79944265 | MS.gene30325:CDS |
| TGAAGGTTGCTGCTCTTGGG+AGG | 0.546694 | 8.1:-79945252 | MS.gene30325:CDS |
| ATTTCCTTGAAACGGTTGGT+CGG | 0.548211 | 8.1:+79944069 | None:intergenic |
| GACTTAGTGGTAAACGCATA+CGG | 0.548539 | 8.1:+79945049 | None:intergenic |
| CCCACAAATCAAAATAGTCC+TGG | 0.549797 | 8.1:+79945135 | None:intergenic |
| GAATCCCTAAGGCCTTCTCC+AGG | 0.554177 | 8.1:+79943795 | None:intergenic |
| TATCAAGTCATTGATACACC+TGG | 0.555673 | 8.1:-79944989 | MS.gene30325:CDS |
| CAAAGCAATTAAACTTGCGA+AGG | 0.557324 | 8.1:-79943760 | MS.gene30325:CDS |
| TCAATTGGTCATGGAGGTGA+GGG | 0.557674 | 8.1:-79944686 | MS.gene30325:CDS |
| TGCATAGCCTTTGTGAACAA+CGG | 0.559637 | 8.1:+79945543 | None:intergenic |
| AAGAGAGGAAGGGTTAAGGC+AGG | 0.562461 | 8.1:-79944228 | MS.gene30325:CDS |
| TTCAATTGGTCATGGAGGTG+AGG | 0.562813 | 8.1:-79944687 | MS.gene30325:CDS |
| TGCTCCAAATACGCCAAACT+CGG | 0.563252 | 8.1:+79945202 | None:intergenic |
| ATGAGTGCGTTGACTGAAGA+AGG | 0.569510 | 8.1:-79944638 | MS.gene30325:CDS |
| AGCTAAGCAAGCAGCCGCTG+AGG | 0.574580 | 8.1:-79944441 | MS.gene30325:CDS |
| TTGTTGCACACAACAATCAA+AGG | 0.575746 | 8.1:+79944791 | None:intergenic |
| TGACCCTGACATTCTACATA+GGG | 0.576210 | 8.1:-79944264 | MS.gene30325:CDS |
| CGATGAGTTTCCTCGTCTTG+GGG | 0.576928 | 8.1:-79945440 | MS.gene30325:CDS |
| CTTCAATTGATCCAAATACC+AGG | 0.577769 | 8.1:-79945153 | MS.gene30325:CDS |
| TATTCTGGAAAGCGCTCCAA+AGG | 0.584874 | 8.1:-79943657 | MS.gene30325:CDS |
| TCCGAAACCACGTGACCAGA+AGG | 0.588470 | 8.1:-79944504 | MS.gene30325:CDS |
| AACGGCCTATCCAAAATCCC+AGG | 0.591191 | 8.1:+79944971 | None:intergenic |
| GCTTCATGTGTTGTATAACA+AGG | 0.597293 | 8.1:-79945392 | MS.gene30325:CDS |
| TTTAGCTTCCAAAACTGCTG+GGG | 0.597660 | 8.1:+79944463 | None:intergenic |
| TGCTCTTGCGCATTTGAGAG+CGG | 0.605421 | 8.1:-79944912 | MS.gene30325:CDS |
| AAGAGTTGGAAAGAGAGGAA+GGG | 0.605706 | 8.1:-79944238 | MS.gene30325:CDS |
| GCCGTTGGATGGGTTATCTG+AGG | 0.607275 | 8.1:-79944756 | MS.gene30325:CDS |
| CCCTGACATTCTACATAGGG+TGG | 0.608061 | 8.1:-79944261 | MS.gene30325:CDS |
| AACCACGTGACCAGAAGGAA+AGG | 0.608119 | 8.1:-79944499 | MS.gene30325:CDS |
| TCACCAGAAGGAAGAAACGA+TGG | 0.608184 | 8.1:-79943915 | MS.gene30325:CDS |
| TTGGTCAGATTAATACTGCT+AGG | 0.610371 | 8.1:-79945351 | MS.gene30325:CDS |
| TCCTCAGATAACCCATCCAA+CGG | 0.612445 | 8.1:+79944755 | None:intergenic |
| AGAAGGAAGAAACGATGGGA+TGG | 0.612953 | 8.1:-79943910 | MS.gene30325:CDS |
| TTAGCTTCCAAAACTGCTGG+GGG | 0.613606 | 8.1:+79944464 | None:intergenic |
| CACCAGAAGGAAGAAACGAT+GGG | 0.615415 | 8.1:-79943914 | MS.gene30325:CDS |
| TGCGTAGCAGATCTGCATCT+AGG | 0.616314 | 8.1:-79943959 | MS.gene30325:CDS |
| ATTGACACCGGAACAGCAAG+AGG | 0.621917 | 8.1:-79944165 | MS.gene30325:CDS |
| AGGTTAGGCAGCATATGGCT+AGG | 0.623301 | 8.1:-79945180 | MS.gene30325:CDS |
| GTGAGAGATTGCTGAACCAG+AGG | 0.624481 | 8.1:-79944589 | MS.gene30325:CDS |
| ATCAAGTCATTGATACACCT+GGG | 0.625389 | 8.1:-79944988 | MS.gene30325:CDS |
| AGCAGATCTGCATCTAGGAA+AGG | 0.625927 | 8.1:-79943954 | MS.gene30325:CDS |
| TCTCCAGGAACAACTTCATG+TGG | 0.626458 | 8.1:+79943810 | None:intergenic |
| TAGCCTTTGTGAACAACGGT+TGG | 0.627876 | 8.1:+79945547 | None:intergenic |
| AAAGCAATTAAACTTGCGAA+GGG | 0.631135 | 8.1:-79943759 | MS.gene30325:CDS |
| CCACCCTATGTAGAATGTCA+GGG | 0.631460 | 8.1:+79944261 | None:intergenic |
| ATCTAGGAAAGGTCGGAAGA+GGG | 0.633227 | 8.1:-79943943 | MS.gene30325:CDS |
| AGAAACAAGAATGCCAAGCG+TGG | 0.633691 | 8.1:-79943723 | MS.gene30325:CDS |
| GATCTGCATCTAGGAAAGGT+CGG | 0.639204 | 8.1:-79943950 | MS.gene30325:CDS |
| GTTGGATGGGTTATCTGAGG+AGG | 0.639325 | 8.1:-79944753 | MS.gene30325:CDS |
| CCAGGAACAACTTCATGTGG+TGG | 0.642177 | 8.1:+79943813 | None:intergenic |
| GGATGAATGTCCCCAAGACG+AGG | 0.644458 | 8.1:+79945430 | None:intergenic |
| GTATTCTAATCCAACAACAT+CGG | 0.653178 | 8.1:-79944115 | MS.gene30325:CDS |
| AAGAGGGAGAGATCACCAGA+AGG | 0.653816 | 8.1:-79943927 | MS.gene30325:CDS |
| CGTTTCAAGGAAATTCGACA+AGG | 0.654192 | 8.1:-79944060 | MS.gene30325:CDS |
| ACACCAACCGTTGTTCACAA+AGG | 0.654882 | 8.1:-79945550 | MS.gene30325:CDS |
| TCACAACAGAAAGAATGGGA+AGG | 0.666061 | 8.1:-79944028 | MS.gene30325:CDS |
| AAGACTTCAATTGGTCATGG+AGG | 0.667217 | 8.1:-79944692 | MS.gene30325:CDS |
| AGATGGAACTGAATTGACAC+CGG | 0.673997 | 8.1:-79944177 | MS.gene30325:CDS |
| TGAGAGATTGCTGAACCAGA+GGG | 0.687755 | 8.1:-79944588 | MS.gene30325:CDS |
| CAATTGGTCATGGAGGTGAG+GGG | 0.688118 | 8.1:-79944685 | MS.gene30325:CDS |
| TGGTGGTCGAGAGACTGACC+TGG | 0.706283 | 8.1:+79943830 | None:intergenic |
| GATCTGGAGGAAGAAAATGG+AGG | 0.758299 | 8.1:-79944398 | MS.gene30325:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACGGATTATAAGTATTTA+AGG | - | chr8.1:79944263-79944282 | MS.gene30325:CDS | 20.0% |
| !!! | TATGTTAAGTTGCTTAAATA+TGG | - | chr8.1:79943974-79943993 | MS.gene30325:CDS | 20.0% |
| !!! | TTTTATCAACAAGATTACTA+GGG | - | chr8.1:79944186-79944205 | MS.gene30325:CDS | 20.0% |
| ! | AAGCAACTTAACATAATCTT+TGG | + | chr8.1:79943969-79943988 | None:intergenic | 25.0% |
| ! | ATAATGCTTTCTCAAATTCA+TGG | + | chr8.1:79944917-79944936 | None:intergenic | 25.0% |
| !! | CTTTTATCAACAAGATTACT+AGG | - | chr8.1:79944185-79944204 | MS.gene30325:CDS | 25.0% |
| !!! | CTTTTCATGAAAATTAGTCT+GGG | + | chr8.1:79943801-79943820 | None:intergenic | 25.0% |
| !!! | TTTGAGAAAGCATTATATTC+TGG | - | chr8.1:79944921-79944940 | MS.gene30325:CDS | 25.0% |
| AAAGCAATTAAACTTGCGAA+GGG | - | chr8.1:79945516-79945535 | MS.gene30325:CDS | 30.0% | |
| AATACTGCTAGGAATCTTAT+TGG | - | chr8.1:79943935-79943954 | MS.gene30325:CDS | 30.0% | |
| ATAATATTCCGATCCTCAAA+CGG | + | chr8.1:79944325-79944344 | None:intergenic | 30.0% | |
| ATCAAAATAGTCCTGGTATT+TGG | + | chr8.1:79944136-79944155 | None:intergenic | 30.0% | |
| ATTCTGTTAATAGCCATAGA+AGG | + | chr8.1:79945297-79945316 | None:intergenic | 30.0% | |
| GTATTCTAATCCAACAACAT+CGG | - | chr8.1:79945160-79945179 | MS.gene30325:CDS | 30.0% | |
| TGTTCTTCTTGGATATATCA+GGG | - | chr8.1:79944392-79944411 | MS.gene30325:CDS | 30.0% | |
| TTGTTCTTCTTGGATATATC+AGG | - | chr8.1:79944391-79944410 | MS.gene30325:CDS | 30.0% | |
| ! | AATACAAGTGCTTTGGTTTA+AGG | + | chr8.1:79945602-79945621 | None:intergenic | 30.0% |
| ! | AGATAATCTGCCAGAAATTT+TGG | - | chr8.1:79944963-79944982 | MS.gene30325:CDS | 30.0% |
| ! | GCTTTTCATGAAAATTAGTC+TGG | + | chr8.1:79943802-79943821 | None:intergenic | 30.0% |
| ! | TCAACGAAATCTTTTCCATT+TGG | + | chr8.1:79943677-79943696 | None:intergenic | 30.0% |
| ! | TCTTTTTAATCCGATGTTGT+TGG | + | chr8.1:79945173-79945192 | None:intergenic | 30.0% |
| !!! | GATGATGATTTTGAGATAGA+TGG | - | chr8.1:79945081-79945100 | MS.gene30325:CDS | 30.0% |
| ATCAAGTCATTGATACACCT+GGG | - | chr8.1:79944287-79944306 | MS.gene30325:CDS | 35.0% | |
| CAAAGCAATTAAACTTGCGA+AGG | - | chr8.1:79945515-79945534 | MS.gene30325:CDS | 35.0% | |
| CAGTTCACAACAGAAAGAAT+GGG | - | chr8.1:79945243-79945262 | MS.gene30325:CDS | 35.0% | |
| CTGGTATTTGGATCAATTGA+AGG | + | chr8.1:79944124-79944143 | None:intergenic | 35.0% | |
| CTTCAATTGATCCAAATACC+AGG | - | chr8.1:79944122-79944141 | MS.gene30325:CDS | 35.0% | |
| CTTGTCGAATTTCCTTGAAA+CGG | + | chr8.1:79945217-79945236 | None:intergenic | 35.0% | |
| GCTTCATGTGTTGTATAACA+AGG | - | chr8.1:79943883-79943902 | MS.gene30325:CDS | 35.0% | |
| TATCAAGTCATTGATACACC+TGG | - | chr8.1:79944286-79944305 | MS.gene30325:CDS | 35.0% | |
| TTGAAGACTTCAATTGGTCA+TGG | - | chr8.1:79944580-79944599 | MS.gene30325:CDS | 35.0% | |
| TTGGTCAGATTAATACTGCT+AGG | - | chr8.1:79943924-79943943 | MS.gene30325:CDS | 35.0% | |
| TTGTGACCATCCAAAATTTC+TGG | + | chr8.1:79944976-79944995 | None:intergenic | 35.0% | |
| TTGTTGCACACAACAATCAA+AGG | + | chr8.1:79944487-79944506 | None:intergenic | 35.0% | |
| TTTCCAGAATACAAGTGCTT+TGG | + | chr8.1:79945609-79945628 | None:intergenic | 35.0% | |
| ! | AAACCAAAGCACTTGTATTC+TGG | - | chr8.1:79945603-79945622 | MS.gene30325:CDS | 35.0% |
| ! | AATCTGCCAGAAATTTTGGA+TGG | - | chr8.1:79944967-79944986 | MS.gene30325:CDS | 35.0% |
| ! | ATATTCTGGCTGATGATGAA+TGG | - | chr8.1:79944935-79944954 | MS.gene30325:CDS | 35.0% |
| ! | ATCTTTTCCATTTGGTACGA+CGG | + | chr8.1:79943669-79943688 | None:intergenic | 35.0% |
| ! | CTTTTCGCATGTAGAATTGT+CGG | + | chr8.1:79943769-79943788 | None:intergenic | 35.0% |
| !!! | ACCAGGACTATTTTGATTTG+TGG | - | chr8.1:79944139-79944158 | MS.gene30325:CDS | 35.0% |
| !!! | CCAGGACTATTTTGATTTGT+GGG | - | chr8.1:79944140-79944159 | MS.gene30325:CDS | 35.0% |
| AAAAACTGAGAAGGATCTGG+AGG | - | chr8.1:79944864-79944883 | MS.gene30325:CDS | 40.0% | |
| AAAAGAACTCTTCCCGACAT+TGG | + | chr8.1:79944170-79944189 | None:intergenic | 40.0% | |
| AAAGAACTCTTCCCGACATT+GGG | + | chr8.1:79944169-79944188 | None:intergenic | 40.0% | |
| AAATCAACGACTGTCTGAAC+AGG | - | chr8.1:79944734-79944753 | MS.gene30325:CDS | 40.0% | |
| AAGACTTCAATTGGTCATGG+AGG | - | chr8.1:79944583-79944602 | MS.gene30325:CDS | 40.0% | |
| AAGAGTTGGAAAGAGAGGAA+GGG | - | chr8.1:79945037-79945056 | MS.gene30325:CDS | 40.0% | |
| AAGATTACCGTCGTACCAAA+TGG | - | chr8.1:79943659-79943678 | MS.gene30325:CDS | 40.0% | |
| AAGGATCTGGAGGAAGAAAA+TGG | - | chr8.1:79944874-79944893 | MS.gene30325:CDS | 40.0% | |
| ACCACTAAGTCGTTGTTTGT+GGG | - | chr8.1:79944238-79944257 | MS.gene30325:CDS | 40.0% | |
| AGATGGAACTGAATTGACAC+CGG | - | chr8.1:79945098-79945117 | MS.gene30325:CDS | 40.0% | |
| AGCGGCAATATTGTTCTTCT+TGG | - | chr8.1:79944381-79944400 | MS.gene30325:CDS | 40.0% | |
| ATCTGAGGAGGATATGAAGT+TGG | - | chr8.1:79944534-79944553 | MS.gene30325:CDS | 40.0% | |
| ATTTCCTTGAAACGGTTGGT+CGG | + | chr8.1:79945209-79945228 | None:intergenic | 40.0% | |
| ATTTGTGGGTATCCCAATGT+CGG | - | chr8.1:79944154-79944173 | MS.gene30325:CDS | 40.0% | |
| CCCACAAATCAAAATAGTCC+TGG | + | chr8.1:79944143-79944162 | None:intergenic | 40.0% | |
| CGTTTCAAGGAAATTCGACA+AGG | - | chr8.1:79945215-79945234 | MS.gene30325:CDS | 40.0% | |
| GACTTAGTGGTAAACGCATA+CGG | + | chr8.1:79944229-79944248 | None:intergenic | 40.0% | |
| GAGAAAAACTGAGAAGGATC+TGG | - | chr8.1:79944861-79944880 | MS.gene30325:CDS | 40.0% | |
| GATCATTACAAGCTTGCACT+TGG | - | chr8.1:79943905-79943924 | MS.gene30325:CDS | 40.0% | |
| GCAGTTCACAACAGAAAGAA+TGG | - | chr8.1:79945242-79945261 | MS.gene30325:CDS | 40.0% | |
| GGAGAAGAGAAAAACTGAGA+AGG | - | chr8.1:79944855-79944874 | MS.gene30325:CDS | 40.0% | |
| TACCACTAAGTCGTTGTTTG+TGG | - | chr8.1:79944237-79944256 | MS.gene30325:CDS | 40.0% | |
| TCACAACAGAAAGAATGGGA+AGG | - | chr8.1:79945247-79945266 | MS.gene30325:CDS | 40.0% | |
| TCATCTTAATCTCAACCCTC+TGG | + | chr8.1:79944705-79944724 | None:intergenic | 40.0% | |
| TCGAATTTCCTTGAAACGGT+TGG | + | chr8.1:79945213-79945232 | None:intergenic | 40.0% | |
| TGAAGCAGATCACCGTAAAA+AGG | + | chr8.1:79943869-79943888 | None:intergenic | 40.0% | |
| TGACCCTGACATTCTACATA+GGG | - | chr8.1:79945011-79945030 | MS.gene30325:CDS | 40.0% | |
| TGCATAGCCTTTGTGAACAA+CGG | + | chr8.1:79943735-79943754 | None:intergenic | 40.0% | |
| TGTACTGTGCTTAAGAGGAT+TGG | - | chr8.1:79944049-79944068 | MS.gene30325:CDS | 40.0% | |
| TTGACCCTGACATTCTACAT+AGG | - | chr8.1:79945010-79945029 | MS.gene30325:CDS | 40.0% | |
| TTGGATATATCAGGGTCTTG+TGG | - | chr8.1:79944400-79944419 | MS.gene30325:CDS | 40.0% | |
| ! | AAGAGGCTTTAGCTGAGATT+AGG | - | chr8.1:79945127-79945146 | MS.gene30325:CDS | 40.0% |
| ! | ACGAGGAAACTCATCGATTA+TGG | + | chr8.1:79943831-79943850 | None:intergenic | 40.0% |
| ! | AGTTTTTCTCTTCTCCTCAG+CGG | + | chr8.1:79944851-79944870 | None:intergenic | 40.0% |
| ! | ATACACCTGGGATTTTGGAT+AGG | - | chr8.1:79944299-79944318 | MS.gene30325:CDS | 40.0% |
| ! | CATTGATACACCTGGGATTT+TGG | - | chr8.1:79944294-79944313 | MS.gene30325:CDS | 40.0% |
| ! | CTTTAGCTTCCAAAACTGCT+GGG | + | chr8.1:79944816-79944835 | None:intergenic | 40.0% |
| ! | GGCATTCTTGTTTCTCTTCT+TGG | + | chr8.1:79945547-79945566 | None:intergenic | 40.0% |
| ! | GGGGACATTCATCCTTTTTA+CGG | - | chr8.1:79943854-79943873 | MS.gene30325:CDS | 40.0% |
| ! | TCTTTTGAGCAGAATCCCTA+AGG | + | chr8.1:79945494-79945513 | None:intergenic | 40.0% |
| ! | TGGATATATCAGGGTCTTGT+GGG | - | chr8.1:79944401-79944420 | MS.gene30325:CDS | 40.0% |
| ! | TTTAGCTTCCAAAACTGCTG+GGG | + | chr8.1:79944815-79944834 | None:intergenic | 40.0% |
| !! | GAAGCGTTGAAGACTTCAAT+TGG | - | chr8.1:79944574-79944593 | MS.gene30325:CDS | 40.0% |
| AAAACTGCTGGGGGAATACA+CGG | + | chr8.1:79944805-79944824 | None:intergenic | 45.0% | |
| ACACCAACCGTTGTTCACAA+AGG | - | chr8.1:79943725-79943744 | MS.gene30325:CDS | 45.0% | |
| ACCCACAAACAACGACTTAG+TGG | + | chr8.1:79944242-79944261 | None:intergenic | 45.0% | |
| AGAAACAAGAATGCCAAGCG+TGG | - | chr8.1:79945552-79945571 | MS.gene30325:CDS | 45.0% | |
| AGAAGGAAGAAACGATGGGA+TGG | - | chr8.1:79945365-79945384 | MS.gene30325:CDS | 45.0% | |
| AGCAGATCTGCATCTAGGAA+AGG | - | chr8.1:79945321-79945340 | MS.gene30325:CDS | 45.0% | |
| ATCCCATCGTTTCTTCCTTC+TGG | + | chr8.1:79945366-79945385 | None:intergenic | 45.0% | |
| ATCGATGAGTTTCCTCGTCT+TGG | - | chr8.1:79943833-79943852 | MS.gene30325:CDS | 45.0% | |
| ATCTAGGAAAGGTCGGAAGA+GGG | - | chr8.1:79945332-79945351 | MS.gene30325:CDS | 45.0% | |
| CAAGGAAATTCGACAAGGAC+AGG | - | chr8.1:79945220-79945239 | MS.gene30325:CDS | 45.0% | |
| CACCAGAAGGAAGAAACGAT+GGG | - | chr8.1:79945361-79945380 | MS.gene30325:CDS | 45.0% | |
| CATGAAGTTGTTCCTGGAGA+AGG | - | chr8.1:79945468-79945487 | MS.gene30325:CDS | 45.0% | |
| CCACCCTATGTAGAATGTCA+GGG | + | chr8.1:79945017-79945036 | None:intergenic | 45.0% | |
| GAAGAGTTGGAAAGAGAGGA+AGG | - | chr8.1:79945036-79945055 | MS.gene30325:CDS | 45.0% | |
| GATCTGCATCTAGGAAAGGT+CGG | - | chr8.1:79945325-79945344 | MS.gene30325:CDS | 45.0% | |
| GATCTGGAGGAAGAAAATGG+AGG | - | chr8.1:79944877-79944896 | MS.gene30325:CDS | 45.0% | |
| GGATGTGTACTGTGCTTAAG+AGG | - | chr8.1:79944044-79944063 | MS.gene30325:CDS | 45.0% | |
| GTATCGCTGTAAGTGCTTGA+AGG | - | chr8.1:79944006-79944025 | MS.gene30325:CDS | 45.0% | |
| GTCGTTGTTTGTGGGTCATA+CGG | - | chr8.1:79944246-79944265 | MS.gene30325:CDS | 45.0% | |
| TAAGAGGATTGGACCGAGTT+TGG | - | chr8.1:79944060-79944079 | MS.gene30325:CDS | 45.0% | |
| TAGCCTTTGTGAACAACGGT+TGG | + | chr8.1:79943731-79943750 | None:intergenic | 45.0% | |
| TCAATTGGTCATGGAGGTGA+GGG | - | chr8.1:79944589-79944608 | MS.gene30325:CDS | 45.0% | |
| TCACCAGAAGGAAGAAACGA+TGG | - | chr8.1:79945360-79945379 | MS.gene30325:CDS | 45.0% | |
| TCCACCCTATGTAGAATGTC+AGG | + | chr8.1:79945018-79945037 | None:intergenic | 45.0% | |
| TCCTCAGATAACCCATCCAA+CGG | + | chr8.1:79944523-79944542 | None:intergenic | 45.0% | |
| TCGATGAGTTTCCTCGTCTT+GGG | - | chr8.1:79943834-79943853 | MS.gene30325:CDS | 45.0% | |
| TCTACATAGGGTGGAAGAGT+TGG | - | chr8.1:79945023-79945042 | MS.gene30325:CDS | 45.0% | |
| TCTCCAGGAACAACTTCATG+TGG | + | chr8.1:79945468-79945487 | None:intergenic | 45.0% | |
| TCTTGGGCTTGATCCTTCTA+TGG | - | chr8.1:79945281-79945300 | MS.gene30325:CDS | 45.0% | |
| TGAGAGATTGCTGAACCAGA+GGG | - | chr8.1:79944687-79944706 | MS.gene30325:CDS | 45.0% | |
| TGCTCCAAATACGCCAAACT+CGG | + | chr8.1:79944076-79944095 | None:intergenic | 45.0% | |
| TGGAAAGAGAGGAAGGGTTA+AGG | - | chr8.1:79945043-79945062 | MS.gene30325:CDS | 45.0% | |
| TGGGTATACTATTGCTCAGC+AGG | - | chr8.1:79944420-79944439 | MS.gene30325:CDS | 45.0% | |
| TTAGCTTCCAAAACTGCTGG+GGG | + | chr8.1:79944814-79944833 | None:intergenic | 45.0% | |
| TTCAATTGGTCATGGAGGTG+AGG | - | chr8.1:79944588-79944607 | MS.gene30325:CDS | 45.0% | |
| TTTGTGGGTATCCCAATGTC+GGG | - | chr8.1:79944155-79944174 | MS.gene30325:CDS | 45.0% | |
| ! | AACGGTTGGTGTTTGACGTT+GGG | + | chr8.1:79943717-79943736 | None:intergenic | 45.0% |
| ! | AGGCTTTAGCTGAGATTAGG+AGG | - | chr8.1:79945130-79945149 | MS.gene30325:CDS | 45.0% |
| ! | GATTTTGGATAGGCCGTTTG+AGG | - | chr8.1:79944309-79944328 | MS.gene30325:CDS | 45.0% |
| ! | GCTTTAGCTTCCAAAACTGC+TGG | + | chr8.1:79944817-79944836 | None:intergenic | 45.0% |
| !! | ATGAGTGCGTTGACTGAAGA+AGG | - | chr8.1:79944637-79944656 | MS.gene30325:CDS | 45.0% |
| !! | TATTCTGGAAAGCGCTCCAA+AGG | - | chr8.1:79945618-79945637 | MS.gene30325:CDS | 45.0% |
| AACCACGTGACCAGAAGGAA+AGG | - | chr8.1:79944776-79944795 | MS.gene30325:CDS | 50.0% | |
| AACGGCCTATCCAAAATCCC+AGG | + | chr8.1:79944307-79944326 | None:intergenic | 50.0% | |
| AAGAGAGGAAGGGTTAAGGC+AGG | - | chr8.1:79945047-79945066 | MS.gene30325:CDS | 50.0% | |
| AAGAGGGAGAGATCACCAGA+AGG | - | chr8.1:79945348-79945367 | MS.gene30325:CDS | 50.0% | |
| AGGTTAGGCAGCATATGGCT+AGG | - | chr8.1:79944095-79944114 | MS.gene30325:CDS | 50.0% | |
| ATTGACACCGGAACAGCAAG+AGG | - | chr8.1:79945110-79945129 | MS.gene30325:CDS | 50.0% | |
| CAATTGGTCATGGAGGTGAG+GGG | - | chr8.1:79944590-79944609 | MS.gene30325:CDS | 50.0% | |
| CATCTAGGAAAGGTCGGAAG+AGG | - | chr8.1:79945331-79945350 | MS.gene30325:CDS | 50.0% | |
| CCACCACATGAAGTTGTTCC+TGG | - | chr8.1:79945462-79945481 | MS.gene30325:CDS | 50.0% | |
| CCAGGAACAACTTCATGTGG+TGG | + | chr8.1:79945465-79945484 | None:intergenic | 50.0% | |
| CCCTGACATTCTACATAGGG+TGG | - | chr8.1:79945014-79945033 | MS.gene30325:CDS | 50.0% | |
| CGATGAGTTTCCTCGTCTTG+GGG | - | chr8.1:79943835-79943854 | MS.gene30325:CDS | 50.0% | |
| CTGGTTCAGCAATCTCTCAC+AGG | + | chr8.1:79944686-79944705 | None:intergenic | 50.0% | |
| GCTCCAAAGGAAAGACAGAC+AGG | - | chr8.1:79945631-79945650 | MS.gene30325:CDS | 50.0% | |
| GCTTGAAGGTTGCTGCTCTT+GGG | - | chr8.1:79944020-79944039 | MS.gene30325:CDS | 50.0% | |
| GGTGGAAGAGTTGGAAAGAG+AGG | - | chr8.1:79945032-79945051 | MS.gene30325:CDS | 50.0% | |
| GTAGATCACTGTCTCGTTCC+AGG | - | chr8.1:79945427-79945446 | MS.gene30325:CDS | 50.0% | |
| GTGAGAGATTGCTGAACCAG+AGG | - | chr8.1:79944686-79944705 | MS.gene30325:CDS | 50.0% | |
| TCCTTCTGGTCACGTGGTTT+CGG | + | chr8.1:79944775-79944794 | None:intergenic | 50.0% | |
| TCTATCAGCTTCTCCACGCT+TGG | + | chr8.1:79945568-79945587 | None:intergenic | 50.0% | |
| TGCGTAGCAGATCTGCATCT+AGG | - | chr8.1:79945316-79945335 | MS.gene30325:CDS | 50.0% | |
| TGCTCTTGCGCATTTGAGAG+CGG | - | chr8.1:79944363-79944382 | MS.gene30325:CDS | 50.0% | |
| TGCTTGAAGGTTGCTGCTCT+TGG | - | chr8.1:79944019-79944038 | MS.gene30325:CDS | 50.0% | |
| TGGACCGAGTTTGGCGTATT+TGG | - | chr8.1:79944069-79944088 | MS.gene30325:CDS | 50.0% | |
| TGGATAGGCCGTTTGAGGAT+CGG | - | chr8.1:79944314-79944333 | MS.gene30325:CDS | 50.0% | |
| TGTTCCTGGAGAAGGCCTTA+GGG | - | chr8.1:79945476-79945495 | MS.gene30325:CDS | 50.0% | |
| TTGTTCCTGGAGAAGGCCTT+AGG | - | chr8.1:79945475-79945494 | MS.gene30325:CDS | 50.0% | |
| ! | CAACGGTTGGTGTTTGACGT+TGG | + | chr8.1:79943718-79943737 | None:intergenic | 50.0% |
| ! | CTGATTTGCAGCCGTTGGAT+GGG | - | chr8.1:79944509-79944528 | MS.gene30325:CDS | 50.0% |
| ! | GAGTTTGGCGTATTTGGAGC+AGG | - | chr8.1:79944075-79944094 | MS.gene30325:CDS | 50.0% |
| ! | GTGTATTCCCCCAGCAGTTT+TGG | - | chr8.1:79944804-79944823 | MS.gene30325:CDS | 50.0% |
| ! | TGGCGTATTTGGAGCAGGTT+AGG | - | chr8.1:79944080-79944099 | MS.gene30325:CDS | 50.0% |
| !! | ACTGATTTGCAGCCGTTGGA+TGG | - | chr8.1:79944508-79944527 | MS.gene30325:CDS | 50.0% |
| !! | CAAGACTGATTTGCAGCCGT+TGG | - | chr8.1:79944504-79944523 | MS.gene30325:CDS | 50.0% |
| !! | CTGAGACGCTGTTTCTTGCT+AGG | + | chr8.1:79945408-79945427 | None:intergenic | 50.0% |
| !! | GCTAAAGCCTCTTGCTGTTC+CGG | + | chr8.1:79945120-79945139 | None:intergenic | 50.0% |
| !! | GTTGGATGGGTTATCTGAGG+AGG | - | chr8.1:79944522-79944541 | MS.gene30325:CDS | 50.0% |
| AGAGCCGACCAACCGTTTCA+AGG | - | chr8.1:79945202-79945221 | MS.gene30325:CDS | 55.0% | |
| GAAGGCAGCTGTCGTCTCTT+GGG | - | chr8.1:79945265-79945284 | MS.gene30325:CDS | 55.0% | |
| GAATCCCTAAGGCCTTCTCC+AGG | + | chr8.1:79945483-79945502 | None:intergenic | 55.0% | |
| GCGCCTGTCTGTCTTTCCTT+TGG | + | chr8.1:79945637-79945656 | None:intergenic | 55.0% | |
| GGAGCAGGTTAGGCAGCATA+TGG | - | chr8.1:79944090-79944109 | MS.gene30325:CDS | 55.0% | |
| GGATGAATGTCCCCAAGACG+AGG | + | chr8.1:79943848-79943867 | None:intergenic | 55.0% | |
| TACACGGAGGCCTTTCCTTC+TGG | + | chr8.1:79944789-79944808 | None:intergenic | 55.0% | |
| TCCGAAACCACGTGACCAGA+AGG | - | chr8.1:79944771-79944790 | MS.gene30325:CDS | 55.0% | |
| TGAAGGTTGCTGCTCTTGGG+AGG | - | chr8.1:79944023-79944042 | MS.gene30325:CDS | 55.0% | |
| ! | GAGGAAGAAAATGGAGGCGC+TGG | - | chr8.1:79944883-79944902 | MS.gene30325:CDS | 55.0% |
| !! | GCCGTTGGATGGGTTATCTG+AGG | - | chr8.1:79944519-79944538 | MS.gene30325:CDS | 55.0% |
| ACTGCTGGGGGAATACACGG+AGG | + | chr8.1:79944802-79944821 | None:intergenic | 60.0% | |
| AGCTAAGCAAGCAGCCGCTG+AGG | - | chr8.1:79944834-79944853 | MS.gene30325:CDS | 60.0% | |
| GGAAGGCAGCTGTCGTCTCT+TGG | - | chr8.1:79945264-79945283 | MS.gene30325:CDS | 60.0% | |
| GGCCTTTCCTTCTGGTCACG+TGG | + | chr8.1:79944781-79944800 | None:intergenic | 60.0% | |
| TGGTCATGGAGGTGAGGGGA+CGG | - | chr8.1:79944594-79944613 | MS.gene30325:CDS | 60.0% | |
| TGGTGGTCGAGAGACTGACC+TGG | + | chr8.1:79945448-79945467 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 79943638 | 79945659 | 79943638 | ID=MS.gene30325 |
| chr8.1 | mRNA | 79943638 | 79945659 | 79943638 | ID=MS.gene30325.t1;Parent=MS.gene30325 |
| chr8.1 | exon | 79943638 | 79945659 | 79943638 | ID=MS.gene30325.t1.exon1;Parent=MS.gene30325.t1 |
| chr8.1 | CDS | 79943638 | 79945659 | 79943638 | ID=cds.MS.gene30325.t1;Parent=MS.gene30325.t1 |
| Gene Sequence |
| Protein sequence |
