AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50596


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50596.t1 MTR_1g070365 82.515 509 84 1 1 504 1 509 0.0 846
MS.gene50596.t1 MTR_1g070345 82.329 498 83 2 12 504 12 509 0.0 822
MS.gene50596.t1 MTR_7g096340 64.286 476 169 1 25 500 29 503 0.0 638
MS.gene50596.t1 MTR_7g096320 62.179 468 176 1 33 500 38 504 0.0 612
MS.gene50596.t1 MTR_1g070370 93.802 242 15 0 170 411 1 242 8.80e-153 435
MS.gene50596.t1 MTR_7g088330 46.123 503 243 10 16 499 15 508 1.17e-147 432
MS.gene50596.t1 MTR_7g029275 43.110 508 270 8 2 500 12 509 4.49e-142 418
MS.gene50596.t1 MTR_3g080580 44.219 493 244 7 30 500 35 518 1.66e-139 412
MS.gene50596.t1 MTR_4g054920 43.966 464 234 9 51 499 64 516 1.12e-125 377
MS.gene50596.t1 MTR_2g086040 42.826 453 240 8 48 496 58 495 2.18e-120 362
MS.gene50596.t1 MTR_1g060550 41.379 464 246 8 48 499 63 512 1.64e-118 358
MS.gene50596.t1 MTR_1g037560 40.121 496 265 12 27 499 57 543 1.81e-114 349
MS.gene50596.t1 MTR_4g075110 40.600 500 256 16 27 499 64 549 6.04e-112 343
MS.gene50596.t1 MTR_1g037550 38.618 492 263 12 37 499 66 547 2.17e-110 339
MS.gene50596.t1 MTR_8g030590 38.536 519 286 12 4 499 2 510 7.01e-110 337
MS.gene50596.t1 MTR_5g070010 37.652 494 267 11 33 499 29 508 2.37e-104 322
MS.gene50596.t1 MTR_8g098435 36.346 520 294 12 4 502 5 508 3.61e-102 316
MS.gene50596.t1 MTR_3g463060 38.285 478 265 12 33 494 34 497 9.12e-102 315
MS.gene50596.t1 MTR_8g035760 37.945 477 268 11 38 499 48 511 2.84e-100 311
MS.gene50596.t1 MTR_4g119660 35.581 534 281 16 8 499 3 515 4.20e-96 300
MS.gene50596.t1 MTR_8g035680 36.076 474 274 10 38 495 48 508 3.40e-95 298
MS.gene50596.t1 MTR_5g019140 35.581 534 281 17 8 499 18 530 3.53e-95 298
MS.gene50596.t1 MTR_1g102220 36.322 435 249 9 38 456 42 464 4.57e-93 292
MS.gene50596.t1 MTR_6g004630 33.742 489 298 11 26 499 26 503 5.32e-93 292
MS.gene50596.t1 MTR_7g033580 34.677 496 300 11 16 499 11 494 4.30e-91 287
MS.gene50596.t1 MTR_1g050362 34.757 515 295 15 11 499 7 506 4.89e-91 287
MS.gene50596.t1 MTR_6g004600 33.333 516 310 10 10 499 8 515 9.23e-90 284
MS.gene50596.t1 MTR_7g033570 34.132 501 303 12 11 499 9 494 2.42e-89 282
MS.gene50596.t1 MTR_6g004670 35.253 434 255 9 82 499 82 505 8.28e-89 281
MS.gene50596.t1 MTR_8g088470 35.417 432 257 9 81 501 73 493 2.10e-86 275
MS.gene50596.t1 MTR_1g035790 34.690 516 300 16 7 499 1 502 1.13e-85 273
MS.gene50596.t1 MTR_6g004590 32.882 517 311 11 10 499 8 515 1.91e-84 270
MS.gene50596.t1 MTR_6g004610 32.488 434 271 8 81 501 41 465 2.67e-84 268
MS.gene50596.t1 MTR_8g035860 36.564 454 254 12 35 467 38 478 3.37e-84 269
MS.gene50596.t1 MTR_1g036130 33.531 507 303 13 15 499 12 506 3.84e-84 269
MS.gene50596.t1 MTR_8g035780 36.344 454 255 11 35 467 39 479 1.51e-82 265
MS.gene50596.t1 MTR_1g035760 32.731 498 294 13 14 499 11 479 4.45e-82 263
MS.gene50596.t1 MTR_8g035810 33.745 486 284 12 5 467 9 479 4.72e-82 264
MS.gene50596.t1 MTR_1g035670 33.858 508 301 15 12 499 10 502 5.30e-82 263
MS.gene50596.t1 MTR_1g036200 32.934 501 306 13 17 499 11 499 1.11e-81 263
MS.gene50596.t1 MTR_1g035750 32.677 508 307 15 14 499 11 505 1.63e-80 259
MS.gene50596.t1 MTR_8g035820 33.881 487 284 14 5 467 6 478 1.28e-79 257
MS.gene50596.t1 MTR_1g035830 32.054 521 293 16 15 499 12 507 1.02e-78 255
MS.gene50596.t1 MTR_1g035800 33.141 519 302 15 11 499 9 512 3.85e-78 254
MS.gene50596.t1 MTR_1g035580 31.445 512 316 14 7 499 1 496 4.07e-78 253
MS.gene50596.t1 MTR_1g036270 31.429 525 314 17 7 499 1 511 2.27e-77 251
MS.gene50596.t1 MTR_7g406990 40.286 350 189 7 37 368 49 396 2.75e-76 247
MS.gene50596.t1 MTR_1g036010 30.651 522 304 15 12 499 10 507 3.15e-76 248
MS.gene50596.t1 MTR_1g035940 28.922 529 301 13 14 499 11 507 7.78e-73 239
MS.gene50596.t1 MTR_1g069715 34.458 415 240 9 89 480 3 408 1.02e-71 241
MS.gene50596.t1 MTR_8g035810 33.410 437 258 10 5 418 9 435 7.28e-71 233
MS.gene50596.t1 MTR_1g035860 34.732 429 251 14 10 418 14 433 1.62e-69 231
MS.gene50596.t1 MTR_8g035680 34.366 355 208 7 157 495 16 361 2.81e-64 213
MS.gene50596.t1 MTR_4g012320 39.631 217 118 4 289 498 12 222 1.36e-50 172
MS.gene50596.t1 MTR_8g035810 30.829 386 234 10 5 367 9 384 3.01e-49 174
MS.gene50596.t1 MTR_1g102210 34.304 309 167 9 158 456 37 319 1.21e-48 172
MS.gene50596.t1 MTR_2g062670 41.935 186 94 3 152 333 48 223 4.48e-36 140
MS.gene50596.t1 MTR_2g062670 36.216 185 73 4 149 333 261 400 3.67e-23 102
MS.gene50596.t1 MTR_2g061750 35.000 180 105 2 80 248 14 192 7.14e-31 119
MS.gene50596.t1 MTR_2g061740 35.000 180 105 2 80 248 14 192 7.36e-31 119
MS.gene50596.t1 MTR_7g079440 26.536 407 267 15 76 466 226 616 7.87e-30 124
MS.gene50596.t1 MTR_1g062190 25.799 438 288 17 81 500 122 540 4.80e-27 114
MS.gene50596.t1 MTR_7g079440 27.171 357 231 14 76 416 226 569 3.22e-26 112
MS.gene50596.t1 MTR_7g006900 24.862 362 243 8 113 466 101 441 3.78e-25 108
MS.gene50596.t1 MTR_2g072270 24.638 414 255 15 78 466 111 492 4.10e-24 105
MS.gene50596.t1 MTR_6g072490 24.615 390 238 14 100 466 126 482 7.39e-23 102
MS.gene50596.t1 MTR_5g009110 23.941 472 296 18 81 503 117 574 1.84e-22 101
MS.gene50596.t1 MTR_2g072400 24.654 434 270 16 81 484 105 511 1.98e-22 100
MS.gene50596.t1 MTR_8g042020 24.339 378 244 12 108 466 138 492 2.35e-22 100
MS.gene50596.t1 MTR_6g017325 27.568 370 223 13 113 466 136 476 3.59e-22 100
MS.gene50596.t1 MTR_2g055430 24.183 459 294 16 53 484 82 513 7.15e-22 99.0
MS.gene50596.t1 MTR_1g101050 24.103 390 240 14 100 466 124 480 1.04e-21 98.6
MS.gene50596.t1 MTR_0171s0020 25.536 466 296 19 14 452 17 458 1.25e-21 98.2
MS.gene50596.t1 MTR_2g055470 24.183 459 294 16 53 484 82 513 1.62e-21 98.2
MS.gene50596.t1 MTR_1g101040 22.539 386 251 12 100 466 128 484 2.14e-21 97.8
MS.gene50596.t1 MTR_3g080610 28.819 288 117 10 177 454 90 299 2.48e-21 95.1
MS.gene50596.t1 MTR_3g093530 24.439 401 253 12 110 484 143 519 3.10e-21 97.1
MS.gene50596.t1 MTR_2g062680 38.255 149 65 3 290 438 30 151 3.24e-21 91.7
MS.gene50596.t1 MTR_5g091760 28.205 234 145 6 244 466 226 447 6.77e-21 95.9
MS.gene50596.t1 MTR_8g008530 23.989 371 244 10 113 467 141 489 1.41e-20 95.1
MS.gene50596.t1 MTR_2g072260 24.939 409 257 13 104 484 120 506 1.78e-20 94.7
MS.gene50596.t1 MTR_8g042000 24.700 417 248 16 80 466 113 493 2.52e-20 94.4
MS.gene50596.t1 MTR_8g100135 23.293 498 301 19 1 467 1 448 4.10e-20 93.6
MS.gene50596.t1 MTR_0181s0030 23.656 465 300 18 15 452 16 452 6.80e-20 92.8
MS.gene50596.t1 MTR_0147s0030 22.906 406 268 12 81 468 124 502 7.76e-20 92.8
MS.gene50596.t1 MTR_8g469360 24.810 395 275 11 80 467 15 394 1.10e-19 91.7
MS.gene50596.t1 MTR_6g008500 23.077 520 328 20 6 477 15 510 1.78e-19 92.0
MS.gene50596.t1 MTR_2g061760 37.113 97 60 1 153 249 4 99 4.20e-19 83.2
MS.gene50596.t1 MTR_8g042060 23.227 409 262 15 81 466 114 493 6.59e-19 90.1
MS.gene50596.t1 MTR_4g062510 29.050 179 121 4 291 466 305 480 8.36e-19 89.7
MS.gene50596.t1 MTR_4g104610 24.494 494 318 23 8 473 7 473 8.41e-19 89.7
MS.gene50596.t1 MTR_4g031820 25.183 409 243 14 110 484 144 523 1.17e-18 89.4
MS.gene50596.t1 MTR_8g046580 38.583 127 61 3 341 463 170 283 1.50e-18 86.7
MS.gene50596.t1 MTR_8g046580 33.333 159 101 4 35 193 12 165 1.15e-16 81.3
MS.gene50596.t1 MTR_4g062500 29.310 174 117 4 296 466 306 476 1.60e-18 89.0
MS.gene50596.t1 MTR_1g107295 28.507 221 135 8 276 481 287 499 1.77e-18 88.6
MS.gene50596.t1 MTR_5g095230 23.227 409 264 14 104 484 123 509 2.41e-18 88.2
MS.gene50596.t1 MTR_4g088195 25.000 256 172 6 229 466 217 470 2.58e-18 88.2
MS.gene50596.t1 MTR_8g076940 24.609 447 280 19 23 455 40 443 3.72e-18 87.4
MS.gene50596.t1 MTR_6g084770 21.325 483 339 15 3 466 9 469 4.06e-18 87.4
MS.gene50596.t1 MTR_2g072380 24.044 366 219 15 158 484 1 346 5.01e-18 85.9
MS.gene50596.t1 MTR_8g098565 25.234 321 195 9 194 500 218 507 5.24e-18 87.0
MS.gene50596.t1 MTR_4g088160 24.903 257 171 7 229 466 217 470 5.92e-18 87.0
MS.gene50596.t1 MTR_7g028020 23.577 492 324 20 1 466 1 466 6.66e-18 87.0
MS.gene50596.t1 MTR_7g055793 23.559 399 274 13 81 468 62 440 1.07e-17 85.9
MS.gene50596.t1 MTR_7g027960 23.780 492 323 20 1 466 1 466 1.09e-17 86.3
MS.gene50596.t1 MTR_4g088170 24.806 258 172 6 229 466 217 472 1.14e-17 86.3
MS.gene50596.t1 MTR_1g107300 30.120 166 103 5 306 466 9 166 1.34e-17 82.0
MS.gene50596.t1 MTR_2g072380 24.044 366 219 15 158 484 141 486 1.41e-17 85.9
MS.gene50596.t1 MTR_1g097220 23.636 495 329 20 25 496 55 523 1.43e-17 85.9
MS.gene50596.t1 MTR_7g055793 23.559 399 274 13 81 468 117 495 1.63e-17 85.9
MS.gene50596.t1 MTR_1g037370 23.756 442 281 13 35 452 35 444 1.75e-17 85.5
MS.gene50596.t1 MTR_2g072310 24.437 311 192 11 207 484 46 346 2.41e-17 84.0
MS.gene50596.t1 MTR_5g007450 22.607 491 331 16 6 479 14 472 3.72e-17 84.3
MS.gene50596.t1 MTR_0025s0110 22.021 386 257 14 100 467 137 496 4.23e-17 84.3
MS.gene50596.t1 MTR_5g045250 22.323 439 289 16 81 496 105 514 5.14e-17 84.3
MS.gene50596.t1 MTR_2g065360 22.799 443 303 16 35 461 11 430 1.13e-16 82.8
MS.gene50596.t1 MTR_8g080520 23.061 477 338 14 5 471 41 498 1.25e-16 83.2
MS.gene50596.t1 MTR_2g072250 23.902 410 260 14 104 484 123 509 1.60e-16 82.8
MS.gene50596.t1 MTR_2g010380 24.351 308 199 5 201 500 229 510 2.39e-16 82.0
MS.gene50596.t1 MTR_6g042610 20.755 530 370 16 4 500 5 517 2.52e-16 82.0
MS.gene50596.t1 MTR_5g007550 22.947 475 314 17 6 461 14 455 4.57e-16 81.3
MS.gene50596.t1 MTR_1g102390 40.404 99 52 2 38 134 42 135 5.17e-16 75.5
MS.gene50596.t1 MTR_6g022450 29.744 195 130 4 286 477 297 487 7.73e-16 80.5
MS.gene50596.t1 MTR_8g063280 27.064 218 150 5 289 500 285 499 9.44e-16 80.1
MS.gene50596.t1 MTR_8g020950 23.747 459 295 20 35 467 42 471 1.01e-15 80.1
MS.gene50596.t1 MTR_8g012590 27.200 250 157 9 243 477 237 476 1.64e-15 79.3
MS.gene50596.t1 MTR_1g023730 21.684 475 316 17 25 466 24 475 2.59e-15 79.0
MS.gene50596.t1 MTR_2g010330 23.377 308 202 6 201 500 227 508 2.60e-15 79.0
MS.gene50596.t1 MTR_5g070690 22.793 487 323 19 6 466 7 466 3.15e-15 78.6
MS.gene50596.t1 MTR_5g070800 22.793 487 323 19 6 466 7 466 3.15e-15 78.6
MS.gene50596.t1 MTR_8g042060 22.330 412 226 16 81 466 114 457 3.79e-15 78.2
MS.gene50596.t1 MTR_7g075610 20.635 504 349 14 1 479 1 478 4.01e-15 78.2
MS.gene50596.t1 MTR_3g076530 23.362 458 307 13 6 445 15 446 4.17e-15 78.2
MS.gene50596.t1 MTR_2g010320 27.854 219 146 3 290 500 290 504 4.30e-15 78.2
MS.gene50596.t1 MTR_4g088420 28.846 208 139 4 299 502 30 232 5.68e-15 75.1
MS.gene50596.t1 MTR_8g020940 22.894 463 292 17 35 466 40 468 8.47e-15 77.4
MS.gene50596.t1 MTR_2g061910 41.584 101 56 2 62 162 56 153 9.33e-15 72.4
MS.gene50596.t1 MTR_5g070920 24.762 210 139 6 270 466 264 467 1.20e-14 76.6
MS.gene50596.t1 MTR_1g069200 25.000 176 124 3 293 466 312 481 1.21e-14 76.6
MS.gene50596.t1 MTR_7g079440 25.094 267 176 10 81 334 232 487 1.29e-14 76.6
MS.gene50596.t1 MTR_8g036185 28.649 185 118 5 290 466 304 482 1.44e-14 76.6
MS.gene50596.t1 MTR_7g012330 22.567 483 331 20 17 479 15 474 1.68e-14 76.3
MS.gene50596.t1 MTR_8g020960 25.306 490 302 23 5 466 17 470 1.73e-14 76.3
MS.gene50596.t1 MTR_4g026200 23.009 452 305 17 38 466 29 460 1.92e-14 75.9
MS.gene50596.t1 MTR_4g018800 22.515 493 319 20 3 455 13 482 2.15e-14 75.9
MS.gene50596.t1 MTR_8g042040 24.074 378 229 12 108 466 138 476 2.27e-14 75.9
MS.gene50596.t1 MTR_1g085680 21.088 441 292 12 81 497 106 514 2.44e-14 75.9
MS.gene50596.t1 MTR_6g034940 28.436 211 126 9 295 497 286 479 3.38e-14 75.1
MS.gene50596.t1 MTR_5g019010 22.004 459 283 16 25 447 29 448 4.32e-14 75.1
MS.gene50596.t1 MTR_5g073250 23.881 469 301 20 12 452 8 448 5.16e-14 74.7
MS.gene50596.t1 MTR_5g016410 21.444 471 308 16 6 451 9 442 5.90e-14 74.7
MS.gene50596.t1 MTR_1g035140 21.355 487 307 19 6 456 8 454 6.10e-14 74.3
MS.gene50596.t1 MTR_7g087520 21.581 468 307 17 25 458 33 474 6.22e-14 74.7
MS.gene50596.t1 MTR_5g018980 21.778 450 279 14 35 447 38 451 6.99e-14 74.3
MS.gene50596.t1 MTR_5g009110 23.926 326 212 12 81 381 117 431 7.44e-14 73.9
MS.gene50596.t1 MTR_5g018500 25.888 197 138 4 311 503 3 195 1.10e-13 70.1
MS.gene50596.t1 MTR_5g070830 25.000 204 134 6 276 466 381 578 1.62e-13 73.6
MS.gene50596.t1 MTR_1g022040 22.931 423 257 19 81 475 102 483 1.77e-13 73.2
MS.gene50596.t1 MTR_6g008430 25.468 267 171 11 226 477 240 493 2.03e-13 72.8
MS.gene50596.t1 MTR_5g070710 25.714 175 120 4 289 459 290 458 2.19e-13 72.8
MS.gene50596.t1 MTR_5g026520 24.599 187 136 3 284 467 292 476 2.22e-13 72.8
MS.gene50596.t1 MTR_8g468780 22.250 400 261 15 81 452 11 388 2.28e-13 72.4
MS.gene50596.t1 MTR_4g089030 21.834 458 307 17 17 447 29 462 2.44e-13 72.8
MS.gene50596.t1 MTR_8g012585 24.309 362 242 11 123 461 63 415 3.00e-13 72.0
MS.gene50596.t1 MTR_8g104100 25.414 181 126 4 289 466 51 225 3.03e-13 70.5
MS.gene50596.t1 MTR_5g070700 22.981 483 315 20 5 459 8 461 4.80e-13 71.6
MS.gene50596.t1 MTR_8g104030 23.868 243 163 8 240 466 8 244 5.23e-13 70.1
MS.gene50596.t1 MTR_6g008640 23.507 268 184 8 223 477 239 498 5.89e-13 71.6
MS.gene50596.t1 MTR_8g076940 24.020 408 263 18 23 416 40 414 9.69e-13 70.5
MS.gene50596.t1 MTR_4g026080 26.471 170 116 4 300 466 1 164 1.00e-12 67.4
MS.gene50596.t1 MTR_3g436390 20.623 514 339 21 22 503 27 503 1.21e-12 70.5
MS.gene50596.t1 MTR_5g094660 23.174 397 269 14 71 452 74 449 1.35e-12 70.1
MS.gene50596.t1 MTR_6g084900 25.431 232 151 9 245 461 1 225 1.49e-12 68.6
MS.gene50596.t1 MTR_4g086130 22.673 419 242 16 76 467 76 439 1.63e-12 70.1
MS.gene50596.t1 MTR_3g076560 20.815 466 315 17 9 452 30 463 1.73e-12 70.1
MS.gene50596.t1 MTR_2g010300 25.909 220 135 5 290 500 290 490 1.84e-12 69.7
MS.gene50596.t1 MTR_8g035790 46.479 71 33 2 397 467 1 66 2.30e-12 63.9
MS.gene50596.t1 MTR_4g094775 22.126 461 299 17 16 452 19 443 2.36e-12 69.3
MS.gene50596.t1 MTR_5g094550 21.296 432 288 17 45 451 45 449 2.60e-12 69.3
MS.gene50596.t1 MTR_4g104570 27.222 180 121 5 302 477 3 176 2.88e-12 66.2
MS.gene50596.t1 MTR_5g070850 22.699 489 312 22 5 461 8 462 3.03e-12 69.3
MS.gene50596.t1 MTR_6g084040 29.677 155 87 5 37 189 32 166 3.48e-12 65.1
MS.gene50596.t1 MTR_5g094570 22.018 436 295 16 35 452 42 450 4.19e-12 68.6
MS.gene50596.t1 MTR_4g089020 22.766 470 300 22 5 447 5 438 8.38e-12 67.8
MS.gene50596.t1 MTR_5g018990 28.431 204 131 6 252 447 253 449 8.69e-12 67.8
MS.gene50596.t1 MTR_4g026030 27.011 174 118 4 296 466 141 308 9.02e-12 67.0
MS.gene50596.t1 MTR_4g025970 22.395 451 309 18 35 466 33 461 9.58e-12 67.8
MS.gene50596.t1 MTR_8g076290 25.532 235 139 8 240 449 229 452 1.12e-11 67.4
MS.gene50596.t1 MTR_3g014880 26.042 288 183 12 209 477 225 501 1.19e-11 67.4
MS.gene50596.t1 MTR_2g010280 25.664 226 142 7 290 500 290 504 1.34e-11 67.0
MS.gene50596.t1 MTR_4g048580 22.034 472 316 20 1 447 1 445 1.54e-11 67.0
MS.gene50596.t1 MTR_5g095260 22.993 461 295 20 17 451 24 450 1.84e-11 66.6
MS.gene50596.t1 MTR_2g437840 22.026 227 158 6 242 463 241 453 2.18e-11 66.6
MS.gene50596.t1 MTR_5g073230 22.022 445 268 20 35 452 45 437 2.38e-11 66.2
MS.gene50596.t1 MTR_3g104560 24.701 251 165 7 244 480 144 384 2.49e-11 65.9
MS.gene50596.t1 MTR_5g094520 22.222 468 314 17 11 452 38 481 2.96e-11 66.2
MS.gene50596.t1 MTR_3g104560 24.701 251 165 7 244 480 279 519 3.16e-11 66.2
MS.gene50596.t1 MTR_1750s0010 29.730 148 95 4 303 447 5 146 3.78e-11 62.0
MS.gene50596.t1 MTR_2g073420 26.047 215 144 6 260 466 264 471 3.83e-11 65.9
MS.gene50596.t1 MTR_4g035330 21.396 444 312 12 20 455 20 434 4.36e-11 65.5
MS.gene50596.t1 MTR_5g056720 26.222 225 147 6 227 447 163 372 4.43e-11 65.1
MS.gene50596.t1 MTR_5g025610 24.029 412 244 18 76 469 76 436 5.12e-11 65.1
MS.gene50596.t1 MTR_6g008630 24.167 360 220 17 153 477 69 410 5.95e-11 65.1
MS.gene50596.t1 MTR_8g006450 24.345 267 188 7 210 468 194 454 6.34e-11 65.1
MS.gene50596.t1 MTR_3g467140 23.427 461 284 18 17 451 15 432 6.47e-11 65.1
MS.gene50596.t1 MTR_3g112120 22.963 270 166 10 247 496 234 481 6.51e-11 65.1
MS.gene50596.t1 MTR_5g023680 22.646 446 313 18 35 466 9 436 6.51e-11 65.1
MS.gene50596.t1 MTR_1g091023 24.783 230 157 6 240 461 232 453 6.74e-11 65.1
MS.gene50596.t1 MTR_5g025610 24.146 410 242 18 76 467 76 434 7.15e-11 64.7
MS.gene50596.t1 MTR_1g091010 24.783 230 157 6 240 461 231 452 7.30e-11 64.7
MS.gene50596.t1 MTR_3g024520 24.713 174 126 3 296 466 299 470 8.46e-11 64.7
MS.gene50596.t1 MTR_1g103670 23.211 517 341 21 5 496 7 492 8.72e-11 64.7
MS.gene50596.t1 MTR_8g006495 23.970 267 189 7 210 468 81 341 8.92e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50596.t1 AT5G63450 45.562 507 263 8 1 499 1 502 7.56e-146 428
MS.gene50596.t1 AT5G63450 45.562 507 263 8 1 499 59 560 3.64e-145 428
MS.gene50596.t1 AT3G48520 45.618 502 263 7 6 501 4 501 5.50e-144 423
MS.gene50596.t1 AT3G56630 45.570 474 239 8 37 499 33 498 1.33e-139 412
MS.gene50596.t1 AT1G34540 44.304 474 244 8 37 499 33 497 5.51e-136 402
MS.gene50596.t1 AT3G01900 43.129 473 253 8 32 499 29 490 6.93e-130 387
MS.gene50596.t1 AT2G27690 44.105 458 237 6 50 499 48 494 1.58e-129 386
MS.gene50596.t1 AT5G08250 40.262 534 264 17 4 499 24 540 4.74e-116 353
MS.gene50596.t1 AT4G00360 40.000 490 261 12 35 499 30 511 1.35e-115 352
MS.gene50596.t1 AT5G08250 41.141 491 244 14 38 499 4 478 4.35e-115 348
MS.gene50596.t1 AT1G24540 39.010 505 272 10 20 499 27 520 8.31e-113 344
MS.gene50596.t1 AT2G45970 37.859 523 290 13 4 502 2 513 1.13e-112 344
MS.gene50596.t1 AT5G23190 39.842 507 267 15 19 499 46 540 1.39e-112 344
MS.gene50596.t1 AT1G63710 38.618 492 267 12 35 502 30 510 4.97e-111 339
MS.gene50596.t1 AT1G01600 38.945 493 264 13 35 499 30 513 8.56e-109 335
MS.gene50596.t1 AT5G58860 38.306 496 259 12 33 499 31 508 6.68e-104 320
MS.gene50596.t1 AT1G13140 38.402 513 275 16 14 499 26 524 4.84e-102 317
MS.gene50596.t1 AT3G26125 39.157 498 259 12 35 499 46 532 4.83e-101 314
MS.gene50596.t1 AT1G13150 37.143 490 272 11 35 499 39 517 3.43e-99 309
MS.gene50596.t1 AT1G69500 38.058 515 251 16 7 470 1 498 1.44e-98 307
MS.gene50596.t1 AT1G13140 37.832 489 240 14 39 499 46 498 5.94e-94 295
MS.gene50596.t1 AT2G21910 33.333 492 296 12 29 499 26 506 1.54e-93 294
MS.gene50596.t1 AT2G44890 36.739 509 278 15 5 491 14 500 2.32e-91 288
MS.gene50596.t1 AT2G45510 35.882 510 283 14 5 492 14 501 5.06e-91 287
MS.gene50596.t1 AT1G65340 34.549 466 280 10 29 478 28 484 6.85e-91 286
MS.gene50596.t1 AT4G39490 32.514 529 309 11 6 499 1 516 4.16e-90 285
MS.gene50596.t1 AT1G47620 33.966 527 308 13 4 504 8 520 4.81e-90 285
MS.gene50596.t1 AT2G44890 35.756 509 267 15 5 492 14 483 2.94e-88 280
MS.gene50596.t1 AT2G23180 32.824 524 305 16 4 499 8 512 1.72e-86 276
MS.gene50596.t1 AT4G39480 33.905 525 304 13 5 499 2 513 2.29e-86 275
MS.gene50596.t1 AT5G52320 32.298 483 305 9 29 498 28 501 2.60e-85 272
MS.gene50596.t1 AT1G57750 33.137 510 305 14 7 500 8 497 8.35e-85 271
MS.gene50596.t1 AT5G52320 32.759 464 290 9 29 479 28 482 8.99e-85 270
MS.gene50596.t1 AT4G32170 33.268 511 312 12 7 499 4 503 9.75e-85 271
MS.gene50596.t1 AT4G39510 32.359 513 316 12 7 499 4 505 4.65e-83 266
MS.gene50596.t1 AT4G39500 32.621 515 308 13 7 499 19 516 6.00e-83 266
MS.gene50596.t1 AT4G39500 33.970 471 276 12 51 499 9 466 1.09e-79 256
MS.gene50596.t1 AT1G57750 32.944 428 265 9 7 422 8 425 6.70e-73 238
MS.gene50596.t1 AT5G02900 30.185 487 278 12 6 468 1 449 9.00e-69 228
MS.gene50596.t1 AT3G53130 25.897 390 258 12 81 454 122 496 1.63e-28 119
MS.gene50596.t1 AT2G46660 23.840 474 333 17 35 499 74 528 2.06e-25 110
MS.gene50596.t1 AT3G48300 26.782 463 286 19 26 466 19 450 1.99e-24 106
MS.gene50596.t1 AT3G48300 26.782 463 286 19 26 466 21 452 2.02e-24 106
MS.gene50596.t1 AT1G31800 25.490 408 270 16 76 466 147 537 6.07e-24 105
MS.gene50596.t1 AT5G24900 25.553 407 253 13 85 466 115 496 1.05e-22 101
MS.gene50596.t1 AT5G24900 25.672 409 244 14 88 466 1 379 2.08e-22 99.8
MS.gene50596.t1 AT4G13290 25.653 421 283 14 35 447 37 435 2.48e-22 100
MS.gene50596.t1 AT3G14640 22.799 443 266 16 80 484 127 531 1.01e-21 99.0
MS.gene50596.t1 AT3G14640 22.799 443 266 16 80 484 105 509 1.06e-21 98.6
MS.gene50596.t1 AT1G01190 23.028 469 322 14 19 473 61 504 2.69e-21 97.4
MS.gene50596.t1 AT4G13310 25.909 440 288 18 23 447 26 442 2.87e-21 97.1
MS.gene50596.t1 AT1G01190 23.028 469 322 14 19 473 66 509 3.05e-21 97.4
MS.gene50596.t1 AT3G48280 25.495 455 298 18 6 445 3 431 1.47e-20 95.1
MS.gene50596.t1 AT5G52400 23.421 380 256 11 100 468 135 490 2.24e-20 94.7
MS.gene50596.t1 AT4G27710 24.109 477 307 17 35 494 74 512 2.25e-20 94.7
MS.gene50596.t1 AT3G14620 23.202 431 286 15 52 466 83 484 3.56e-20 94.0
MS.gene50596.t1 AT3G14680 24.664 446 261 17 76 484 100 507 4.87e-20 93.6
MS.gene50596.t1 AT3G48310 24.711 433 285 17 26 445 28 432 6.34e-20 93.2
MS.gene50596.t1 AT2G46950 23.013 478 315 13 35 497 129 568 7.76e-20 93.2
MS.gene50596.t1 AT2G26710 26.290 407 252 12 76 463 103 480 1.02e-19 92.4
MS.gene50596.t1 AT3G48270 23.583 441 281 18 25 445 27 431 1.05e-19 92.4
MS.gene50596.t1 AT4G15110 22.678 463 306 13 81 499 124 578 1.59e-19 92.4
MS.gene50596.t1 AT5G24910 23.951 405 263 13 85 466 119 501 1.77e-19 92.0
MS.gene50596.t1 AT3G61880 22.052 458 335 15 25 474 60 503 2.50e-19 91.3
MS.gene50596.t1 AT3G61880 22.052 458 335 15 25 474 60 503 4.68e-19 90.9
MS.gene50596.t1 AT5G24950 25.670 448 274 19 35 455 36 451 5.63e-19 90.1
MS.gene50596.t1 AT4G13770 24.094 469 312 19 4 451 3 448 8.72e-19 89.7
MS.gene50596.t1 AT3G14630 23.380 432 267 17 61 466 84 477 3.34e-18 87.8
MS.gene50596.t1 AT5G36110 28.139 231 148 5 244 467 227 446 3.86e-18 87.4
MS.gene50596.t1 AT3G14630 23.380 432 267 17 61 466 139 532 4.18e-18 87.8
MS.gene50596.t1 AT3G14660 23.874 444 266 16 53 466 80 481 9.99e-18 86.3
MS.gene50596.t1 AT3G14690 26.303 422 240 17 76 466 135 516 1.38e-17 86.3
MS.gene50596.t1 AT3G14690 25.581 430 233 18 76 466 100 481 1.55e-17 85.9
MS.gene50596.t1 AT5G42590 25.572 481 312 16 1 459 1 457 1.64e-17 85.5
MS.gene50596.t1 AT3G61040 30.213 235 144 7 245 466 233 460 2.96e-17 84.7
MS.gene50596.t1 AT5G05260 21.862 494 331 18 6 461 11 487 3.87e-17 84.7
MS.gene50596.t1 AT3G14660 27.917 240 143 9 243 466 110 335 2.65e-16 80.9
MS.gene50596.t1 AT3G28740 25.496 353 216 13 123 459 131 452 4.70e-16 81.3
MS.gene50596.t1 AT4G37330 22.197 446 314 15 15 451 16 437 6.25e-16 80.9
MS.gene50596.t1 AT2G46960 21.839 435 297 13 81 497 106 515 1.24e-15 80.1
MS.gene50596.t1 AT1G64930 26.776 183 127 3 289 467 297 476 1.36e-15 79.7
MS.gene50596.t1 AT1G13710 22.973 518 327 22 4 489 19 496 1.46e-15 79.7
MS.gene50596.t1 AT2G42850 27.542 236 143 7 226 451 221 438 1.73e-15 79.3
MS.gene50596.t1 AT5G38450 23.514 370 244 10 113 466 139 485 2.38e-15 79.0
MS.gene50596.t1 AT3G26210 24.112 394 255 17 81 451 77 449 2.46e-15 79.0
MS.gene50596.t1 AT2G46960 23.058 399 264 13 117 497 26 399 2.50e-15 78.2
MS.gene50596.t1 AT4G37320 22.154 492 280 16 16 459 8 444 2.84e-15 78.6
MS.gene50596.t1 AT3G25180 21.951 492 348 15 7 477 8 484 2.85e-15 79.0
MS.gene50596.t1 AT2G42250 29.891 184 115 6 290 466 301 477 4.67e-15 78.2
MS.gene50596.t1 AT1G64940 22.417 513 313 20 1 466 1 475 7.68e-15 77.4
MS.gene50596.t1 AT3G26230 21.905 525 342 16 7 496 1 492 1.21e-14 76.6
MS.gene50596.t1 AT3G48320 25.427 468 290 21 1 445 1 432 2.46e-14 75.9
MS.gene50596.t1 AT3G48290 21.822 472 292 19 26 466 29 454 2.61e-14 75.5
MS.gene50596.t1 AT5G05260 21.721 488 307 19 6 461 11 455 2.70e-14 75.5
MS.gene50596.t1 AT2G30770 21.946 442 289 16 35 452 37 446 3.22e-14 75.5
MS.gene50596.t1 AT4G39950 22.462 463 298 18 35 461 60 497 3.24e-14 75.5
MS.gene50596.t1 AT4G39950 22.462 463 298 18 35 461 100 537 3.84e-14 75.5
MS.gene50596.t1 AT1G11600 23.853 218 162 2 285 499 293 509 6.64e-14 74.3
MS.gene50596.t1 AT5G57260 21.219 443 306 15 24 445 23 443 6.74e-14 74.3
MS.gene50596.t1 AT1G67110 21.531 418 280 10 88 484 115 505 8.77e-14 73.9
MS.gene50596.t1 AT1G64950 27.473 182 123 3 289 466 298 474 1.44e-13 73.6
MS.gene50596.t1 AT3G26280 22.737 453 313 16 19 451 17 452 1.68e-13 73.2
MS.gene50596.t1 AT3G26280 22.737 453 313 16 19 451 34 469 1.88e-13 73.2
MS.gene50596.t1 AT1G13080 22.474 485 324 17 6 466 9 465 4.43e-13 72.0
MS.gene50596.t1 AT3G48290 29.878 164 107 4 306 466 322 480 6.14e-13 71.6
MS.gene50596.t1 AT2G25160 26.482 253 156 9 233 466 238 479 6.65e-13 71.2
MS.gene50596.t1 AT4G31940 24.335 263 175 9 240 485 248 503 7.68e-13 71.2
MS.gene50596.t1 AT3G03470 22.936 218 159 3 290 499 293 509 1.59e-12 70.1
MS.gene50596.t1 AT3G26300 21.225 457 321 13 6 445 6 440 1.70e-12 70.1
MS.gene50596.t1 AT2G45550 24.180 244 165 7 236 466 235 471 2.66e-12 69.3
MS.gene50596.t1 AT1G66540 25.561 223 145 6 242 459 66 272 3.48e-12 68.2
MS.gene50596.t1 AT5G57220 21.909 461 316 15 16 459 14 447 3.85e-12 68.9
MS.gene50596.t1 AT1G11680 23.774 265 188 6 212 468 198 456 4.40e-12 68.6
MS.gene50596.t1 AT2G23190 23.299 485 316 18 1 463 45 495 4.82e-12 68.6
MS.gene50596.t1 AT2G22330 22.026 454 311 19 35 461 62 499 6.17e-12 68.6
MS.gene50596.t1 AT3G26310 21.460 452 318 16 10 445 9 439 6.37e-12 68.2
MS.gene50596.t1 AT1G66540 25.561 223 145 6 242 459 125 331 6.57e-12 67.8
MS.gene50596.t1 AT2G45570 28.016 257 152 12 228 466 231 472 6.95e-12 68.2
MS.gene50596.t1 AT2G12190 25.824 182 128 3 289 466 298 476 7.52e-12 68.2
MS.gene50596.t1 AT5G24960 24.229 454 293 19 24 455 28 452 8.25e-12 67.8
MS.gene50596.t1 AT2G22330 22.026 454 311 19 35 461 85 522 8.69e-12 67.8
MS.gene50596.t1 AT5G36220 21.193 486 303 16 4 451 3 446 9.68e-12 67.8
MS.gene50596.t1 AT4G37430 23.319 476 311 20 10 459 9 456 9.81e-12 67.8
MS.gene50596.t1 AT2G29090 25.806 217 142 4 258 467 154 358 1.01e-11 67.0
MS.gene50596.t1 AT2G29090 25.820 244 152 5 258 494 249 470 1.38e-11 67.0
MS.gene50596.t1 AT2G29090 25.820 244 152 5 258 494 249 470 1.38e-11 67.0
MS.gene50596.t1 AT4G31970 23.922 255 170 9 240 477 247 494 1.43e-11 67.0
MS.gene50596.t1 AT3G10560 20.569 457 310 14 35 466 50 478 1.65e-11 67.0
MS.gene50596.t1 AT2G27010 23.176 233 162 7 242 463 221 447 2.59e-11 66.2
MS.gene50596.t1 AT1G73340 20.174 461 311 17 12 455 20 440 2.65e-11 66.2
MS.gene50596.t1 AT1G13110 21.019 471 324 18 6 451 5 452 3.70e-11 65.9
MS.gene50596.t1 AT4G15360 21.304 460 327 15 9 451 16 457 3.89e-11 65.9
MS.gene50596.t1 AT5G25900 25.220 341 222 16 162 486 171 494 3.94e-11 65.9
MS.gene50596.t1 AT2G14100 24.038 208 143 6 255 453 260 461 4.18e-11 65.9
MS.gene50596.t1 AT4G37400 22.222 459 315 16 19 459 19 453 5.61e-11 65.1
MS.gene50596.t1 AT1G13090 23.214 392 262 16 81 451 73 446 6.77e-11 65.1

Find 144 sgRNAs with CRISPR-Local

Find 159 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGGATTGTGGAGGGTGTTT+TGG 0.202962 1.2:-53914830 None:intergenic
TTGGCATTATGAGGGAGTTT+AGG 0.203209 1.2:+53916126 MS.gene50596:CDS
CGATCCCTCTTCGAGTTTCT+AGG 0.256251 1.2:+53915069 MS.gene50596:CDS
TGGGAAGGTCTGAGAAAATA+TGG 0.259141 1.2:+53915937 MS.gene50596:CDS
CTGCACTCACGTGGTTCTTT+TGG 0.262457 1.2:+53915676 MS.gene50596:CDS
GCTTTCACAAACGCGATTTC+CGG 0.272073 1.2:-53915357 None:intergenic
ATGCGCTTCTCGATCTTTAC+TGG 0.272119 1.2:-53916224 None:intergenic
ATGCTGCTATTCCATTTCTA+TGG 0.278242 1.2:+53915418 MS.gene50596:CDS
TGGCATTATGAGGGAGTTTA+GGG 0.289127 1.2:+53916127 MS.gene50596:CDS
AACAAAGAAACCAATGTTTC+GGG 0.297667 1.2:-53914754 None:intergenic
CCACCGTTTCAACGAATTTA+CGG 0.301817 1.2:-53915173 None:intergenic
GTGATAAGCTTTATTCTTGC+TGG 0.302739 1.2:+53915636 MS.gene50596:CDS
CAGATGAAGAGGTTGGTTAT+TGG 0.303753 1.2:+53916107 MS.gene50596:CDS
TGGAGAATATCTTGAAAATC+AGG 0.314859 1.2:-53915264 None:intergenic
TTTGTCCTCCACCGCCCCTT+TGG 0.318667 1.2:+53914955 MS.gene50596:CDS
GGTTGGTTATTGGCATTATG+AGG 0.323632 1.2:+53916117 MS.gene50596:CDS
TTACGATGAGGTGAAGGATA+TGG 0.331983 1.2:+53915770 MS.gene50596:CDS
CTGGGCCGAGGGTGTGTTTA+GGG 0.335396 1.2:+53916066 MS.gene50596:CDS
GTCGAGCTGACGATGGAAAA+TGG 0.339965 1.2:+53916000 MS.gene50596:CDS
GCTGGGCCGAGGGTGTGTTT+AGG 0.340311 1.2:+53916065 MS.gene50596:CDS
GGGATTTAGTGTTGAATTCA+TGG 0.351461 1.2:-53915149 None:intergenic
AGGTGGAGGAAGGGATAGTT+TGG 0.353372 1.2:-53914933 None:intergenic
TAACAAAGAAACCAATGTTT+CGG 0.355766 1.2:-53914755 None:intergenic
CACCTTTCATTATTGAAGTA+AGG 0.357913 1.2:-53916196 None:intergenic
AATATTTGCATAATCGCGTT+TGG 0.359824 1.2:+53915303 MS.gene50596:CDS
CGGTGGAAGTTGGCTGCAAT+GGG 0.364573 1.2:-53914883 None:intergenic
GAAAATCAGGGAGGATCATT+TGG 0.367747 1.2:-53915251 None:intergenic
TCCTTGGCATCCACCGGAAC+TGG 0.375599 1.2:-53915837 None:intergenic
GTATCTCCTCCCTTCTCTTC+CGG 0.377236 1.2:+53915338 MS.gene50596:CDS
GCGGTGGAAGTTGGCTGCAA+TGG 0.379719 1.2:-53914884 None:intergenic
AATGGATCCTTATACTTATC+CGG 0.392782 1.2:+53916034 MS.gene50596:CDS
AGGAGCCAAAGGGGCGGTGG+AGG 0.401210 1.2:-53914960 None:intergenic
GATGGAAAATGGAGCTTTGT+TGG 0.421609 1.2:+53916011 MS.gene50596:CDS
CCAATGATAGGGTATGAGTT+GGG 0.423249 1.2:-53914850 None:intergenic
GTCGCTCGGTTCCAATGTTT+AGG 0.423710 1.2:-53915455 None:intergenic
TTCTTCACTAATGTTCCATC+TGG 0.425736 1.2:-53915882 None:intergenic
TTGGAAGCTTCATGGAGAAT+AGG 0.435384 1.2:-53915225 None:intergenic
GGCTTCTTTCAACCGTCGCT+CGG 0.437548 1.2:-53915469 None:intergenic
AGGGTATGAGTTGGGGATTG+TGG 0.446758 1.2:-53914842 None:intergenic
GGGAAGGTCTGAGAAAATAT+GGG 0.449056 1.2:+53915938 MS.gene50596:CDS
GGGAACACAGAACCAATGAT+AGG 0.450374 1.2:-53914862 None:intergenic
GAAAATATGGGGATCCGATT+GGG 0.454172 1.2:+53915950 MS.gene50596:CDS
AGCAGGAGCCAAAGGGGCGG+TGG 0.454764 1.2:-53914963 None:intergenic
AGAAAATATGGGGATCCGAT+TGG 0.462705 1.2:+53915949 MS.gene50596:CDS
ATCATCGTAGGCTGCTTCCT+TGG 0.463298 1.2:-53915853 None:intergenic
GGGGCGGTGGAGGACAAAGG+TGG 0.465168 1.2:-53914950 None:intergenic
CCCAACTCATACCCTATCAT+TGG 0.466137 1.2:+53914850 MS.gene50596:CDS
TGATAAGCTTTATTCTTGCT+GGG 0.466948 1.2:+53915637 MS.gene50596:CDS
TGCGTATCATGTATATGCTA+TGG 0.467152 1.2:+53915917 MS.gene50596:CDS
GAGATTGTATCCTCCAGTTC+CGG 0.471458 1.2:+53915824 MS.gene50596:CDS
GCGGTGGAGGACAAAGGTGG+AGG 0.473309 1.2:-53914947 None:intergenic
GTGCTTCCAGCGATGGATGA+AGG 0.478116 1.2:+53916149 MS.gene50596:CDS
GATGGAACATTAGTGAAGAA+AGG 0.482838 1.2:+53915885 MS.gene50596:CDS
AGAATGTGTTGCACCACGGC+AGG 0.484109 1.2:-53915003 None:intergenic
GTATGAGTTGGGGATTGTGG+AGG 0.486724 1.2:-53914839 None:intergenic
AGAAAAGACAACCTTGGAAT+CGG 0.487161 1.2:+53915551 MS.gene50596:CDS
AACGCGATTTCCGGAAGAGA+AGG 0.487878 1.2:-53915348 None:intergenic
GTTTAGGGTGCTTCCAGCGA+TGG 0.488226 1.2:+53916142 MS.gene50596:CDS
TATGAGTTGGGGATTGTGGA+GGG 0.488899 1.2:-53914838 None:intergenic
GAAGCCGTCGCTGAAGTAAG+AGG 0.493725 1.2:+53915486 MS.gene50596:CDS
ACTTCCACCGCCTCATACAA+TGG 0.500524 1.2:+53914896 MS.gene50596:CDS
GCTCGACTCAACCACCTCTC+AGG 0.503978 1.2:-53915984 None:intergenic
AGGTCGAAACTCAGCCCAAT+CGG 0.504301 1.2:-53915964 None:intergenic
AAAATGGAGCTTTGTTGGAA+TGG 0.504854 1.2:+53916016 MS.gene50596:CDS
TGGAGGACAAAGGTGGAGGA+AGG 0.508548 1.2:-53914943 None:intergenic
TTTAGTGTTGAATTCATGGC+TGG 0.512761 1.2:-53915145 None:intergenic
TGCTTCCAGCGATGGATGAA+GGG 0.514603 1.2:+53916150 MS.gene50596:CDS
AAAAGATTCATCTGAATGAC+CGG 0.516142 1.2:-53915601 None:intergenic
AAATCCATTGTATGAGGCGG+TGG 0.519389 1.2:-53914900 None:intergenic
TCTTTCCCTAAACACACCCT+CGG 0.519430 1.2:-53916071 None:intergenic
CAAAATATCCACCGATTCCA+AGG 0.519645 1.2:-53915562 None:intergenic
TTTGTTGTAGCAAGGGAAGT+TGG 0.522871 1.2:-53915031 None:intergenic
CTCTTCGAGTTTCTAGGTAA+CGG 0.528060 1.2:+53915075 MS.gene50596:CDS
GTTGGTTATTGGCATTATGA+GGG 0.528173 1.2:+53916118 MS.gene50596:CDS
TCAACACCGACGGTGAAAGT+TGG 0.532443 1.2:+53915103 MS.gene50596:CDS
ATGGAACATTAGTGAAGAAA+GGG 0.533849 1.2:+53915886 MS.gene50596:CDS
ATGACTGAGCAGGAGCCAAA+GGG 0.534379 1.2:-53914970 None:intergenic
CCTCCGTAAATTCGTTGAAA+CGG 0.535085 1.2:+53915170 MS.gene50596:CDS
GATGACTGAGCAGGAGCCAA+AGG 0.535426 1.2:-53914971 None:intergenic
CCAAATGGAACCCGAAACAT+TGG 0.536157 1.2:+53914744 None:intergenic
CACCTTACTTCAATAATGAA+AGG 0.538300 1.2:+53916194 MS.gene50596:CDS
ACCAATGATAGGGTATGAGT+TGG 0.541087 1.2:-53914851 None:intergenic
GCGTATCATGTATATGCTAT+GGG 0.544791 1.2:+53915918 MS.gene50596:CDS
GCTGCTTCCTTGGCATCCAC+CGG 0.546000 1.2:-53915843 None:intergenic
AAGAGGGATCGATGAAATGT+AGG 0.546407 1.2:-53915057 None:intergenic
GTAGGACCTTTGTTGTAGCA+AGG 0.550558 1.2:-53915039 None:intergenic
TCCAGTTCCGGTGGATGCCA+AGG 0.553592 1.2:+53915836 MS.gene50596:CDS
TGTCAGAAATCCATTGTATG+AGG 0.557023 1.2:-53914906 None:intergenic
GTTCTTACAGATGAAGAGGT+TGG 0.560529 1.2:+53916100 MS.gene50596:CDS
TAGGACCTTTGTTGTAGCAA+GGG 0.561102 1.2:-53915038 None:intergenic
GTAAGGTGTGAATCAAACTC+TGG 0.564216 1.2:-53916179 None:intergenic
ACGCGATTTCCGGAAGAGAA+GGG 0.564509 1.2:-53915347 None:intergenic
GCTTAAAGAAAAGACAACCT+TGG 0.566936 1.2:+53915545 MS.gene50596:CDS
TCAACCCCTTCATCCATCGC+TGG 0.566996 1.2:-53916155 None:intergenic
TTGTATGAGGCGGTGGAAGT+TGG 0.568583 1.2:-53914893 None:intergenic
TAAATTCGTTGAAACGGTGG+TGG 0.569245 1.2:+53915176 MS.gene50596:CDS
AAAGGGGCGGTGGAGGACAA+AGG 0.569526 1.2:-53914953 None:intergenic
AACCTTCCAACTTTCACCGT+CGG 0.569736 1.2:-53915109 None:intergenic
AGTTAGTTACGATGAGGTGA+AGG 0.569800 1.2:+53915764 MS.gene50596:CDS
AACTTCCCTTGCTACAACAA+AGG 0.571997 1.2:+53915033 MS.gene50596:CDS
GGAGGACAAAGGTGGAGGAA+GGG 0.572045 1.2:-53914942 None:intergenic
TGGCGTTCTTACAGATGAAG+AGG 0.573982 1.2:+53916096 MS.gene50596:CDS
GAACATTAGTGAAGAAAGGG+TGG 0.574370 1.2:+53915889 MS.gene50596:CDS
AATCGCGTTTGGATTCGATC+CGG 0.575283 1.2:+53915314 MS.gene50596:CDS
CAATGATAGGGTATGAGTTG+GGG 0.580382 1.2:-53914849 None:intergenic
GGAGAATATCTTGAAAATCA+GGG 0.581457 1.2:-53915263 None:intergenic
AAAGACAACCTTGGAATCGG+TGG 0.587007 1.2:+53915554 MS.gene50596:CDS
TATTATCGAACGTAAAACGT+TGG 0.587376 1.2:-53915284 None:intergenic
GTTTGCCGTGATGACTGAGC+AGG 0.590226 1.2:-53914980 None:intergenic
GAATGTGTTGCACCACGGCA+GGG 0.595117 1.2:-53915002 None:intergenic
AGAGAAGGGAGGAGATACTC+CGG 0.603307 1.2:-53915333 None:intergenic
TAAACATTGGAACCGAGCGA+CGG 0.603550 1.2:+53915457 MS.gene50596:CDS
GGTGTGTTTAGGGAAAGAAA+TGG 0.608381 1.2:+53916076 MS.gene50596:CDS
ATCATGTATATGCTATGGGA+AGG 0.611232 1.2:+53915922 MS.gene50596:CDS
CTTACTTCAATAATGAAAGG+TGG 0.615026 1.2:+53916197 MS.gene50596:CDS
CACCGACGGTGAAAGTTGGA+AGG 0.617402 1.2:+53915107 MS.gene50596:CDS
ATTGTATCCTCCAGTTCCGG+TGG 0.618690 1.2:+53915827 MS.gene50596:CDS
CAACTTCAGCTGCACTCACG+TGG 0.619047 1.2:+53915667 MS.gene50596:CDS
GTTACCTAGAAACTCGAAGA+GGG 0.622020 1.2:-53915073 None:intergenic
CCGTAAATTCGTTGAAACGG+TGG 0.622086 1.2:+53915173 MS.gene50596:CDS
GGAACACAGAACCAATGATA+GGG 0.623187 1.2:-53914861 None:intergenic
TTGGCATCCACCGGAACTGG+AGG 0.626326 1.2:-53915834 None:intergenic
CATCACGGCAAACCCTGCCG+TGG 0.626725 1.2:+53914990 MS.gene50596:CDS
GCTTCCAGCGATGGATGAAG+GGG 0.630676 1.2:+53916151 MS.gene50596:CDS
TGGTTGAGTCGAGCTGACGA+TGG 0.638987 1.2:+53915993 MS.gene50596:CDS
CGTTTCAACGAATTTACGGA+GGG 0.644582 1.2:-53915169 None:intergenic
AACGGTATCTTCAACACCGA+CGG 0.645950 1.2:+53915093 MS.gene50596:CDS
ATCTGGCAAAACATCATCGT+AGG 0.646289 1.2:-53915865 None:intergenic
GAGTCCTCTTACTTCAGCGA+CGG 0.647743 1.2:-53915490 None:intergenic
GGAAGGTCTGAGAAAATATG+GGG 0.648867 1.2:+53915939 MS.gene50596:CDS
CTGAGTTTCGACCTGAGAGG+TGG 0.648894 1.2:+53915973 MS.gene50596:CDS
CTGAGCAGGAGCCAAAGGGG+CGG 0.651232 1.2:-53914966 None:intergenic
CCGTTTCAACGAATTTACGG+AGG 0.651690 1.2:-53915170 None:intergenic
TGGCTCCTGCTCAGTCATCA+CGG 0.653308 1.2:+53914975 MS.gene50596:CDS
CAGAAATCCATTGTATGAGG+CGG 0.656815 1.2:-53914903 None:intergenic
GGGCTGAGTTTCGACCTGAG+AGG 0.665153 1.2:+53915970 MS.gene50596:CDS
AATGATAGTTAGTTACGATG+AGG 0.669710 1.2:+53915758 MS.gene50596:CDS
CGTTACCTAGAAACTCGAAG+AGG 0.684043 1.2:-53915074 None:intergenic
TGACTGAGCAGGAGCCAAAG+GGG 0.695461 1.2:-53914969 None:intergenic
CGATTTCCGGAAGAGAAGGG+AGG 0.696110 1.2:-53915344 None:intergenic
GGTGGAAGTTGGCTGCAATG+GGG 0.698732 1.2:-53914882 None:intergenic
GCACACGAATCAGCAGCGAG+AGG 0.705897 1.2:+53915391 MS.gene50596:CDS
TTTGAGAATGTGTTGCACCA+CGG 0.713899 1.2:-53915007 None:intergenic
GAATATCTTGAAAATCAGGG+AGG 0.746007 1.2:-53915260 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! GTGAAAAAATTCCTAAACAT+TGG + chr1.2:53915444-53915463 MS.gene50596:CDS 25.0%
! TAACAAAGAAACCAATGTTT+CGG - chr1.2:53914758-53914777 None:intergenic 25.0%
!! TTTTTCACTTTCCATAGAAA+TGG - chr1.2:53915432-53915451 None:intergenic 25.0%
AAAAGATTCATCTGAATGAC+CGG - chr1.2:53915604-53915623 None:intergenic 30.0%
AACAAAGAAACCAATGTTTC+GGG - chr1.2:53914757-53914776 None:intergenic 30.0%
AATATTTGCATAATCGCGTT+TGG + chr1.2:53915303-53915322 MS.gene50596:CDS 30.0%
AATGATAGTTAGTTACGATG+AGG + chr1.2:53915758-53915777 MS.gene50596:CDS 30.0%
AATGGATCCTTATACTTATC+CGG + chr1.2:53916034-53916053 MS.gene50596:CDS 30.0%
ATGGAACATTAGTGAAGAAA+GGG + chr1.2:53915886-53915905 MS.gene50596:CDS 30.0%
CACCTTACTTCAATAATGAA+AGG + chr1.2:53916194-53916213 MS.gene50596:CDS 30.0%
CACCTTTCATTATTGAAGTA+AGG - chr1.2:53916199-53916218 None:intergenic 30.0%
CTTACTTCAATAATGAAAGG+TGG + chr1.2:53916197-53916216 MS.gene50596:CDS 30.0%
GGAGAATATCTTGAAAATCA+GGG - chr1.2:53915266-53915285 None:intergenic 30.0%
TATTATCGAACGTAAAACGT+TGG - chr1.2:53915287-53915306 None:intergenic 30.0%
TGAAAAACCGGATAAGTATA+AGG - chr1.2:53916044-53916063 None:intergenic 30.0%
TGGAGAATATCTTGAAAATC+AGG - chr1.2:53915267-53915286 None:intergenic 30.0%
! CTTTTCCCTAACAATTTTTG+TGG - chr1.2:53915517-53915536 None:intergenic 30.0%
!! TGATAAGCTTTATTCTTGCT+GGG + chr1.2:53915637-53915656 MS.gene50596:CDS 30.0%
!!! TGTTTTGGATCGTTTTTTTG+TGG - chr1.2:53914818-53914837 None:intergenic 30.0%
ACTCGCCACAAAAATTGTTA+GGG + chr1.2:53915509-53915528 MS.gene50596:CDS 35.0%
AGAAAAGACAACCTTGGAAT+CGG + chr1.2:53915551-53915570 MS.gene50596:CDS 35.0%
ATCATGTATATGCTATGGGA+AGG + chr1.2:53915922-53915941 MS.gene50596:CDS 35.0%
ATGCTGCTATTCCATTTCTA+TGG + chr1.2:53915418-53915437 MS.gene50596:CDS 35.0%
GAATATCTTGAAAATCAGGG+AGG - chr1.2:53915263-53915282 None:intergenic 35.0%
GATGGAACATTAGTGAAGAA+AGG + chr1.2:53915885-53915904 MS.gene50596:CDS 35.0%
GCGTATCATGTATATGCTAT+GGG + chr1.2:53915918-53915937 MS.gene50596:CDS 35.0%
GCTTAAAGAAAAGACAACCT+TGG + chr1.2:53915545-53915564 MS.gene50596:CDS 35.0%
GTTGGTTATTGGCATTATGA+GGG + chr1.2:53916118-53916137 MS.gene50596:CDS 35.0%
TGCGTATCATGTATATGCTA+TGG + chr1.2:53915917-53915936 MS.gene50596:CDS 35.0%
TGTCAGAAATCCATTGTATG+AGG - chr1.2:53914909-53914928 None:intergenic 35.0%
TTCTTCACTAATGTTCCATC+TGG - chr1.2:53915885-53915904 None:intergenic 35.0%
! GGGATTTAGTGTTGAATTCA+TGG - chr1.2:53915152-53915171 None:intergenic 35.0%
! TTTAGTGTTGAATTCATGGC+TGG - chr1.2:53915148-53915167 None:intergenic 35.0%
!! AAAATGGAGCTTTGTTGGAA+TGG + chr1.2:53916016-53916035 MS.gene50596:CDS 35.0%
!! GTGATAAGCTTTATTCTTGC+TGG + chr1.2:53915636-53915655 MS.gene50596:CDS 35.0%
!!! TTGTCGCGATTTTTAAGTTC+CGG + chr1.2:53915582-53915601 MS.gene50596:CDS 35.0%
!!! TTTGGTTTTTGGAAGCTTCA+TGG - chr1.2:53915236-53915255 None:intergenic 35.0%
AACTTCCCTTGCTACAACAA+AGG + chr1.2:53915033-53915052 MS.gene50596:CDS 40.0%
AAGAGGGATCGATGAAATGT+AGG - chr1.2:53915060-53915079 None:intergenic 40.0%
ACCAATGATAGGGTATGAGT+TGG - chr1.2:53914854-53914873 None:intergenic 40.0%
AGAAAATATGGGGATCCGAT+TGG + chr1.2:53915949-53915968 MS.gene50596:CDS 40.0%
AGTTAGTTACGATGAGGTGA+AGG + chr1.2:53915764-53915783 MS.gene50596:CDS 40.0%
ATCTGGCAAAACATCATCGT+AGG - chr1.2:53915868-53915887 None:intergenic 40.0%
CAATGATAGGGTATGAGTTG+GGG - chr1.2:53914852-53914871 None:intergenic 40.0%
CAGAAATCCATTGTATGAGG+CGG - chr1.2:53914906-53914925 None:intergenic 40.0%
CCAATGATAGGGTATGAGTT+GGG - chr1.2:53914853-53914872 None:intergenic 40.0%
CCACCGTTTCAACGAATTTA+CGG - chr1.2:53915176-53915195 None:intergenic 40.0%
CCTCCGTAAATTCGTTGAAA+CGG + chr1.2:53915170-53915189 MS.gene50596:CDS 40.0%
CGTTTCAACGAATTTACGGA+GGG - chr1.2:53915172-53915191 None:intergenic 40.0%
GAAAATATGGGGATCCGATT+GGG + chr1.2:53915950-53915969 MS.gene50596:CDS 40.0%
GAAAATCAGGGAGGATCATT+TGG - chr1.2:53915254-53915273 None:intergenic 40.0%
GAACATTAGTGAAGAAAGGG+TGG + chr1.2:53915889-53915908 MS.gene50596:CDS 40.0%
GACTCGCCACAAAAATTGTT+AGG + chr1.2:53915508-53915527 MS.gene50596:CDS 40.0%
GGAACACAGAACCAATGATA+GGG - chr1.2:53914864-53914883 None:intergenic 40.0%
GGAAGGTCTGAGAAAATATG+GGG + chr1.2:53915939-53915958 MS.gene50596:CDS 40.0%
GGGAAGGTCTGAGAAAATAT+GGG + chr1.2:53915938-53915957 MS.gene50596:CDS 40.0%
GGTGTGTTTAGGGAAAGAAA+TGG + chr1.2:53916076-53916095 MS.gene50596:CDS 40.0%
GTAAGGTGTGAATCAAACTC+TGG - chr1.2:53916182-53916201 None:intergenic 40.0%
GTTACCTAGAAACTCGAAGA+GGG - chr1.2:53915076-53915095 None:intergenic 40.0%
GTTCTTACAGATGAAGAGGT+TGG + chr1.2:53916100-53916119 MS.gene50596:CDS 40.0%
TAAATTCGTTGAAACGGTGG+TGG + chr1.2:53915176-53915195 MS.gene50596:CDS 40.0%
TGGCATTATGAGGGAGTTTA+GGG + chr1.2:53916127-53916146 MS.gene50596:CDS 40.0%
TGGGAAGGTCTGAGAAAATA+TGG + chr1.2:53915937-53915956 MS.gene50596:CDS 40.0%
TTACGATGAGGTGAAGGATA+TGG + chr1.2:53915770-53915789 MS.gene50596:CDS 40.0%
TTGGAAGCTTCATGGAGAAT+AGG - chr1.2:53915228-53915247 None:intergenic 40.0%
TTGGCATTATGAGGGAGTTT+AGG + chr1.2:53916126-53916145 MS.gene50596:CDS 40.0%
TTTGAGAATGTGTTGCACCA+CGG - chr1.2:53915010-53915029 None:intergenic 40.0%
! CAGATGAAGAGGTTGGTTAT+TGG + chr1.2:53916107-53916126 MS.gene50596:CDS 40.0%
! CTCTTCGAGTTTCTAGGTAA+CGG + chr1.2:53915075-53915094 MS.gene50596:CDS 40.0%
! GATGGAAAATGGAGCTTTGT+TGG + chr1.2:53916011-53916030 MS.gene50596:CDS 40.0%
! GGTTGGTTATTGGCATTATG+AGG + chr1.2:53916117-53916136 MS.gene50596:CDS 40.0%
! TACGATGATGTTTTGCCAGA+TGG + chr1.2:53915867-53915886 MS.gene50596:CDS 40.0%
! TAGGACCTTTGTTGTAGCAA+GGG - chr1.2:53915041-53915060 None:intergenic 40.0%
! TTTGTTGTAGCAAGGGAAGT+TGG - chr1.2:53915034-53915053 None:intergenic 40.0%
!! CAAAATATCCACCGATTCCA+AGG - chr1.2:53915565-53915584 None:intergenic 40.0%
!!! ACTTATCCGGTTTTTCAAGC+TGG + chr1.2:53916047-53916066 MS.gene50596:CDS 40.0%
!!! AGGGAGGATCATTTGGTTTT+TGG - chr1.2:53915247-53915266 None:intergenic 40.0%
!!! CTTATCCGGTTTTTCAAGCT+GGG + chr1.2:53916048-53916067 MS.gene50596:CDS 40.0%
AAAGACAACCTTGGAATCGG+TGG + chr1.2:53915554-53915573 MS.gene50596:CDS 45.0%
AAATCCATTGTATGAGGCGG+TGG - chr1.2:53914903-53914922 None:intergenic 45.0%
AACCTTCCAACTTTCACCGT+CGG - chr1.2:53915112-53915131 None:intergenic 45.0%
AACGGTATCTTCAACACCGA+CGG + chr1.2:53915093-53915112 MS.gene50596:CDS 45.0%
AATCGCGTTTGGATTCGATC+CGG + chr1.2:53915314-53915333 MS.gene50596:CDS 45.0%
ATGCGCTTCTCGATCTTTAC+TGG - chr1.2:53916227-53916246 None:intergenic 45.0%
CCCAACTCATACCCTATCAT+TGG + chr1.2:53914850-53914869 MS.gene50596:CDS 45.0%
CCGTAAATTCGTTGAAACGG+TGG + chr1.2:53915173-53915192 MS.gene50596:CDS 45.0%
CCGTTTCAACGAATTTACGG+AGG - chr1.2:53915173-53915192 None:intergenic 45.0%
CGTTACCTAGAAACTCGAAG+AGG - chr1.2:53915077-53915096 None:intergenic 45.0%
GAGATTGTATCCTCCAGTTC+CGG + chr1.2:53915824-53915843 MS.gene50596:CDS 45.0%
GCTTTCACAAACGCGATTTC+CGG - chr1.2:53915360-53915379 None:intergenic 45.0%
GGGAACACAGAACCAATGAT+AGG - chr1.2:53914865-53914884 None:intergenic 45.0%
TAAACATTGGAACCGAGCGA+CGG + chr1.2:53915457-53915476 MS.gene50596:CDS 45.0%
TCTTTCCCTAAACACACCCT+CGG - chr1.2:53916074-53916093 None:intergenic 45.0%
TGGCGTTCTTACAGATGAAG+AGG + chr1.2:53916096-53916115 MS.gene50596:CDS 45.0%
! GTAGGACCTTTGTTGTAGCA+AGG - chr1.2:53915042-53915061 None:intergenic 45.0%
! TATGAGTTGGGGATTGTGGA+GGG - chr1.2:53914841-53914860 None:intergenic 45.0%
AACGCGATTTCCGGAAGAGA+AGG - chr1.2:53915351-53915370 None:intergenic 50.0%
ACGCGATTTCCGGAAGAGAA+GGG - chr1.2:53915350-53915369 None:intergenic 50.0%
ACTTCCACCGCCTCATACAA+TGG + chr1.2:53914896-53914915 MS.gene50596:CDS 50.0%
AGAGAAGGGAGGAGATACTC+CGG - chr1.2:53915336-53915355 None:intergenic 50.0%
AGGTCGAAACTCAGCCCAAT+CGG - chr1.2:53915967-53915986 None:intergenic 50.0%
AGGTGGAGGAAGGGATAGTT+TGG - chr1.2:53914936-53914955 None:intergenic 50.0%
ATCATCGTAGGCTGCTTCCT+TGG - chr1.2:53915856-53915875 None:intergenic 50.0%
ATGACTGAGCAGGAGCCAAA+GGG - chr1.2:53914973-53914992 None:intergenic 50.0%
ATTGTATCCTCCAGTTCCGG+TGG + chr1.2:53915827-53915846 MS.gene50596:CDS 50.0%
GAGTCCTCTTACTTCAGCGA+CGG - chr1.2:53915493-53915512 None:intergenic 50.0%
GTATCTCCTCCCTTCTCTTC+CGG + chr1.2:53915338-53915357 MS.gene50596:CDS 50.0%
GTCGAGCTGACGATGGAAAA+TGG + chr1.2:53916000-53916019 MS.gene50596:CDS 50.0%
GTCGCTCGGTTCCAATGTTT+AGG - chr1.2:53915458-53915477 None:intergenic 50.0%
TCAACACCGACGGTGAAAGT+TGG + chr1.2:53915103-53915122 MS.gene50596:CDS 50.0%
TGCTTCCAGCGATGGATGAA+GGG + chr1.2:53916150-53916169 MS.gene50596:CDS 50.0%
TTGTATGAGGCGGTGGAAGT+TGG - chr1.2:53914896-53914915 None:intergenic 50.0%
! AGGGTATGAGTTGGGGATTG+TGG - chr1.2:53914845-53914864 None:intergenic 50.0%
! CGATCCCTCTTCGAGTTTCT+AGG + chr1.2:53915069-53915088 MS.gene50596:CDS 50.0%
! CTGCACTCACGTGGTTCTTT+TGG + chr1.2:53915676-53915695 MS.gene50596:CDS 50.0%
! GTATGAGTTGGGGATTGTGG+AGG - chr1.2:53914842-53914861 None:intergenic 50.0%
AGAATGTGTTGCACCACGGC+AGG - chr1.2:53915006-53915025 None:intergenic 55.0%
CAACTTCAGCTGCACTCACG+TGG + chr1.2:53915667-53915686 MS.gene50596:CDS 55.0%
CACCGACGGTGAAAGTTGGA+AGG + chr1.2:53915107-53915126 MS.gene50596:CDS 55.0%
CGATTTCCGGAAGAGAAGGG+AGG - chr1.2:53915347-53915366 None:intergenic 55.0%
CGGTGGAAGTTGGCTGCAAT+GGG - chr1.2:53914886-53914905 None:intergenic 55.0%
CTCGGCCCAGCTTGAAAAAC+CGG - chr1.2:53916056-53916075 None:intergenic 55.0%
CTGAGTTTCGACCTGAGAGG+TGG + chr1.2:53915973-53915992 MS.gene50596:CDS 55.0%
GAAGCCGTCGCTGAAGTAAG+AGG + chr1.2:53915486-53915505 MS.gene50596:CDS 55.0%
GAATGTGTTGCACCACGGCA+GGG - chr1.2:53915005-53915024 None:intergenic 55.0%
GATGACTGAGCAGGAGCCAA+AGG - chr1.2:53914974-53914993 None:intergenic 55.0%
GCTTCCAGCGATGGATGAAG+GGG + chr1.2:53916151-53916170 MS.gene50596:CDS 55.0%
GGAGGACAAAGGTGGAGGAA+GGG - chr1.2:53914945-53914964 None:intergenic 55.0%
GGCTTCTTTCAACCGTCGCT+CGG - chr1.2:53915472-53915491 None:intergenic 55.0%
GGTGGAAGTTGGCTGCAATG+GGG - chr1.2:53914885-53914904 None:intergenic 55.0%
GTGCTTCCAGCGATGGATGA+AGG + chr1.2:53916149-53916168 MS.gene50596:CDS 55.0%
GTTTGCCGTGATGACTGAGC+AGG - chr1.2:53914983-53915002 None:intergenic 55.0%
TCAACCCCTTCATCCATCGC+TGG - chr1.2:53916158-53916177 None:intergenic 55.0%
TGACTGAGCAGGAGCCAAAG+GGG - chr1.2:53914972-53914991 None:intergenic 55.0%
TGGAGGACAAAGGTGGAGGA+AGG - chr1.2:53914946-53914965 None:intergenic 55.0%
TGGCTCCTGCTCAGTCATCA+CGG + chr1.2:53914975-53914994 MS.gene50596:CDS 55.0%
TGGTTGAGTCGAGCTGACGA+TGG + chr1.2:53915993-53916012 MS.gene50596:CDS 55.0%
! GTTTAGGGTGCTTCCAGCGA+TGG + chr1.2:53916142-53916161 MS.gene50596:CDS 55.0%
!!! GGGGATTGTGGAGGGTGTTT+TGG - chr1.2:53914833-53914852 None:intergenic 55.0%
!!! GGTTTTTCAAGCTGGGCCGA+GGG + chr1.2:53916055-53916074 MS.gene50596:CDS 55.0%
AAAGGGGCGGTGGAGGACAA+AGG - chr1.2:53914956-53914975 None:intergenic 60.0%
GCACACGAATCAGCAGCGAG+AGG + chr1.2:53915391-53915410 MS.gene50596:CDS 60.0%
GCGGTGGAAGTTGGCTGCAA+TGG - chr1.2:53914887-53914906 None:intergenic 60.0%
GCTCGACTCAACCACCTCTC+AGG - chr1.2:53915987-53916006 None:intergenic 60.0%
GCTGCTTCCTTGGCATCCAC+CGG - chr1.2:53915846-53915865 None:intergenic 60.0%
GGGCTGAGTTTCGACCTGAG+AGG + chr1.2:53915970-53915989 MS.gene50596:CDS 60.0%
TCCAGTTCCGGTGGATGCCA+AGG + chr1.2:53915836-53915855 MS.gene50596:CDS 60.0%
TCCTTGGCATCCACCGGAAC+TGG - chr1.2:53915840-53915859 None:intergenic 60.0%
TTGGCATCCACCGGAACTGG+AGG - chr1.2:53915837-53915856 None:intergenic 60.0%
TTTGTCCTCCACCGCCCCTT+TGG + chr1.2:53914955-53914974 MS.gene50596:CDS 60.0%
! CTGGGCCGAGGGTGTGTTTA+GGG + chr1.2:53916066-53916085 MS.gene50596:CDS 60.0%
!!! CGGTTTTTCAAGCTGGGCCG+AGG + chr1.2:53916054-53916073 MS.gene50596:CDS 60.0%
CATCACGGCAAACCCTGCCG+TGG + chr1.2:53914990-53915009 MS.gene50596:CDS 65.0%
CTGAGCAGGAGCCAAAGGGG+CGG - chr1.2:53914969-53914988 None:intergenic 65.0%
GCGGTGGAGGACAAAGGTGG+AGG - chr1.2:53914950-53914969 None:intergenic 65.0%
! GCTGGGCCGAGGGTGTGTTT+AGG + chr1.2:53916065-53916084 MS.gene50596:CDS 65.0%
AGCAGGAGCCAAAGGGGCGG+TGG - chr1.2:53914966-53914985 None:intergenic 70.0%
AGGAGCCAAAGGGGCGGTGG+AGG - chr1.2:53914963-53914982 None:intergenic 70.0%
GGGGCGGTGGAGGACAAAGG+TGG - chr1.2:53914953-53914972 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 53914748 53916262 53914748 ID=MS.gene50596
chr1.2 mRNA 53914748 53916262 53914748 ID=MS.gene50596.t1;Parent=MS.gene50596
chr1.2 exon 53914748 53916262 53914748 ID=MS.gene50596.t1.exon1;Parent=MS.gene50596.t1
chr1.2 CDS 53914748 53916262 53914748 ID=cds.MS.gene50596.t1;Parent=MS.gene50596.t1
Gene Sequence

>MS.gene50596

ATGGAACCCGAAACATTGGTTTCTTTGTTACTTTTCTCTGCAACTCTCGTTTCGTTCTTATTCTTAGCCACAAAAAAACGATCCAAAACACCCTCCACAATCCCCAACTCATACCCTATCATTGGTTCTGTGTTCCCCATTGCAGCCAACTTCCACCGCCTCATACAATGGATTTCTGACATTCTCCAAACTATCCCTTCCTCCACCTTTGTCCTCCACCGCCCCTTTGGCTCCTGCTCAGTCATCACGGCAAACCCTGCCGTGGTGCAACACATTCTCAAAACCAACTTCCCTTGCTACAACAAAGGTCCTACATTTCATCGATCCCTCTTCGAGTTTCTAGGTAACGGTATCTTCAACACCGACGGTGAAAGTTGGAAGGTTCAACGACAAATCTCCAGCCATGAATTCAACACTAAATCCCTCCGTAAATTCGTTGAAACGGTGGTGGATGTTGAACTTAACGATCGTCTGCTTCCTATTCTCCATGAAGCTTCCAAAAACCAAATGATCCTCCCTGATTTTCAAGATATTCTCCAACGTTTTACGTTCGATAATATTTGCATAATCGCGTTTGGATTCGATCCGGAGTATCTCCTCCCTTCTCTTCCGGAAATCGCGTTTGTGAAAGCTTTTGACGACAGCACACGAATCAGCAGCGAGAGGATAAATGCTGCTATTCCATTTCTATGGAAAGTGAAAAAATTCCTAAACATTGGAACCGAGCGACGGTTGAAAGAAGCCGTCGCTGAAGTAAGAGGACTCGCCACAAAAATTGTTAGGGAAAAGAAAAAAGAGCTTAAAGAAAAGACAACCTTGGAATCGGTGGATATTTTGTCGCGATTTTTAAGTTCCGGTCATTCAGATGAATCTTTTGTAGTTGATATTGTGATAAGCTTTATTCTTGCTGGGAGAGATACAACTTCAGCTGCACTCACGTGGTTCTTTTGGTTAATCTCTAAGCATAGTCATGTAGAGAATGAGATTCTTAAAGAGATTACTAGAAAATCAATGATAGTTAGTTACGATGAGGTGAAGGATATGGTTTACACTCATGCATCGTTATGCGAGAGTATGAGATTGTATCCTCCAGTTCCGGTGGATGCCAAGGAAGCAGCCTACGATGATGTTTTGCCAGATGGAACATTAGTGAAGAAAGGGTGGATAGTTGCGTATCATGTATATGCTATGGGAAGGTCTGAGAAAATATGGGGATCCGATTGGGCTGAGTTTCGACCTGAGAGGTGGTTGAGTCGAGCTGACGATGGAAAATGGAGCTTTGTTGGAATGGATCCTTATACTTATCCGGTTTTTCAAGCTGGGCCGAGGGTGTGTTTAGGGAAAGAAATGGCGTTCTTACAGATGAAGAGGTTGGTTATTGGCATTATGAGGGAGTTTAGGGTGCTTCCAGCGATGGATGAAGGGGTTGAACCAGAGTTTGATTCACACCTTACTTCAATAATGAAAGGTGGCTTTCCAGTAAAGATCGAGAAGCGCATGTACACACATGAATAA

Protein sequence

>MS.gene50596.t1

MEPETLVSLLLFSATLVSFLFLATKKRSKTPSTIPNSYPIIGSVFPIAANFHRLIQWISDILQTIPSSTFVLHRPFGSCSVITANPAVVQHILKTNFPCYNKGPTFHRSLFEFLGNGIFNTDGESWKVQRQISSHEFNTKSLRKFVETVVDVELNDRLLPILHEASKNQMILPDFQDILQRFTFDNICIIAFGFDPEYLLPSLPEIAFVKAFDDSTRISSERINAAIPFLWKVKKFLNIGTERRLKEAVAEVRGLATKIVREKKKELKEKTTLESVDILSRFLSSGHSDESFVVDIVISFILAGRDTTSAALTWFFWLISKHSHVENEILKEITRKSMIVSYDEVKDMVYTHASLCESMRLYPPVPVDAKEAAYDDVLPDGTLVKKGWIVAYHVYAMGRSEKIWGSDWAEFRPERWLSRADDGKWSFVGMDPYTYPVFQAGPRVCLGKEMAFLQMKRLVIGIMREFRVLPAMDEGVEPEFDSHLTSIMKGGFPVKIEKRMYTHE