AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35712

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35712.t1 MTR_2g087890 97.500 480 12 0 1 480 1 480 0.0 960
MS.gene35712.t1 MTR_1g021652 40.741 459 266 4 9 464 44 499 2.31e-123 370
MS.gene35712.t1 MTR_3g111530 39.451 474 271 7 20 480 88 558 2.96e-116 353
MS.gene35712.t1 MTR_1g034320 39.030 474 268 8 22 479 14 482 2.01e-107 328
MS.gene35712.t1 MTR_4g068550 36.910 466 280 7 12 469 1 460 2.71e-103 317
MS.gene35712.t1 MTR_1g034330 37.014 489 281 9 10 479 6 486 4.41e-103 317
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35712.t1 AT4G15440 60.677 384 147 3 101 480 1 384 3.17e-170 484
MS.gene35712.t1 AT5G42650 41.703 458 261 3 10 464 39 493 4.10e-125 374

Find 142 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTACCTGCACACTGTTTAT+TGG 0.128108 2.1:+14006410 None:intergenic
CAGACAGGTTAGATTATTTC+TGG 0.141000 2.1:-14010493 MS.gene35712:CDS
TTGAATTTACGGGAAATATT+AGG 0.183729 2.1:-14010262 MS.gene35712:CDS
GTTATGCTCTCAATCAATTT+TGG 0.194984 2.1:+14006810 None:intergenic
CGTCGGTATGATTTAATTAA+AGG 0.200247 2.1:-14006342 MS.gene35712:CDS
AACTATTTGTATTGGTCTAA+TGG 0.210824 2.1:-14006459 MS.gene35712:CDS
GGAGCCTGATTCGGCGATTT+TGG 0.224744 2.1:+14007301 None:intergenic
TTTCTCTCACCTCTTTGATA+TGG 0.280521 2.1:-14010333 MS.gene35712:CDS
TGTTCCTAGTGTTGAATTTA+CGG 0.291492 2.1:-14010273 MS.gene35712:CDS
TCAAGAACTGCAATAATATT+AGG 0.294757 2.1:+14010365 None:intergenic
TGAAGCAAAGTTCAAGCATA+TGG 0.300137 2.1:-14007478 MS.gene35712:CDS
CCACCGGTTCCACTTCAATT+TGG 0.305118 2.1:-14006654 MS.gene35712:CDS
GCTACCGATCCGGCAGATTC+CGG 0.308018 2.1:-14010549 MS.gene35712:CDS
TGAATTTACGGGAAATATTA+GGG 0.330709 2.1:-14010261 MS.gene35712:CDS
GACGGTGGTGGTATCGGTGG+TGG 0.334671 2.1:+14010605 None:intergenic
ACTTTGCTTCAAAATGTTCA+TGG 0.334862 2.1:+14007490 None:intergenic
ACTATTTGTATTGGTCTAAT+GGG 0.337855 2.1:-14006458 MS.gene35712:CDS
TAGACAGTGTTGCTTCAATT+TGG 0.347494 2.1:+14007417 None:intergenic
TCCAGGTTTGATATCAGTTC+TGG 0.348706 2.1:+14007452 None:intergenic
AGCTCCGTTGGCCTTGCTTT+CGG 0.351852 2.1:+14010569 None:intergenic
GTCGGTATGATTTAATTAAA+GGG 0.360322 2.1:-14006341 MS.gene35712:CDS
CGTTCCGGTTTAAATTGTTC+TGG 0.360380 2.1:+14006513 None:intergenic
ACCAACCCTAACTCTTCATT+TGG 0.361089 2.1:+14006287 None:intergenic
TTCTCTTTAGTGAACCGTTC+CGG 0.366646 2.1:+14006498 None:intergenic
AATGGCCATCCGTGGCTTCC+CGG 0.370701 2.1:+14010530 None:intergenic
GTTCCTAGTGTTGAATTTAC+GGG 0.375540 2.1:-14010272 MS.gene35712:CDS
GTGTTGGGTTTCAACTCATA+TGG 0.377271 2.1:-14006852 MS.gene35712:CDS
GATCCCAAAATCGCCGAATC+AGG 0.380571 2.1:-14007305 MS.gene35712:CDS
GAGAAAGGCGGTTCAACTCT+TGG 0.381113 2.1:-14006741 MS.gene35712:CDS
ATAATCTAACCTGTCTGATA+AGG 0.382700 2.1:+14010499 None:intergenic
TTGCTTTCGGTGGAGTTGCT+AGG 0.382888 2.1:+14010582 None:intergenic
AGTTATTGAACTATTTGTAT+TGG 0.390965 2.1:-14006467 MS.gene35712:CDS
GAACCGGTGGGTTCATTCGC+AGG 0.400858 2.1:+14006667 None:intergenic
CTACCGATCCGGCAGATTCC+GGG 0.403146 2.1:-14010548 MS.gene35712:CDS
AGCATAACGAACGGTCCAAC+CGG 0.423269 2.1:-14006795 MS.gene35712:CDS
AGAGTTGGAACTAATAAATT+CGG 0.427670 2.1:-14006703 MS.gene35712:CDS
AGAAAGGCGGTTCAACTCTT+GGG 0.427891 2.1:-14006740 MS.gene35712:CDS
GGAAAATTTCTTCGAGTGGT+TGG 0.429611 2.1:+14007219 None:intergenic
TGGTCTAATGGGCCACAAAC+TGG 0.430261 2.1:-14006447 MS.gene35712:CDS
TAATCTAACCTGTCTGATAA+GGG 0.445035 2.1:+14010500 None:intergenic
TCTTCATTTGGCCTTCTGTA+AGG 0.448353 2.1:+14006299 None:intergenic
GGATTCACGTTGGTGAAGAA+AGG 0.453342 2.1:+14010386 None:intergenic
TCTCAACTTCTCTTGCAAAC+CGG 0.454849 2.1:+14006776 None:intergenic
CATAAGGGTAAGAGAAGGAA+TGG 0.459434 2.1:+14007195 None:intergenic
GGCCTTCTGTAAGGCAGTAA+TGG 0.459616 2.1:+14006308 None:intergenic
GACAAAAGAGATGTTCTAGT+TGG 0.460373 2.1:-14010302 MS.gene35712:CDS
GAAGCAAAGTTCAAGCATAT+GGG 0.463109 2.1:-14007477 MS.gene35712:CDS
GCTAGGGACGGTGGTGGTAT+CGG 0.463818 2.1:+14010599 None:intergenic
TGCTTTCGGTGGAGTTGCTA+GGG 0.468309 2.1:+14010583 None:intergenic
CAATAAACAGTGTGCAGGTA+AGG 0.471780 2.1:-14006409 MS.gene35712:CDS
TGAACCAGAACAATTTAAAC+CGG 0.473665 2.1:-14006517 MS.gene35712:CDS
ATCAAGGGAAGGATCGGCTC+TGG 0.474506 2.1:+14007325 None:intergenic
TACCCTTATGCTCTTGTCAG+TGG 0.477774 2.1:-14007182 MS.gene35712:CDS
CGACCAAATTGAAGTGGAAC+CGG 0.478711 2.1:+14006651 None:intergenic
CTCCGCGTTCAATGTGAAGA+AGG 0.479052 2.1:-14006595 MS.gene35712:CDS
GTTTGACTCGTTAAAAGAGT+TGG 0.480961 2.1:-14006718 MS.gene35712:CDS
TCTCCACTGACAAGAGCATA+AGG 0.482167 2.1:+14007179 None:intergenic
GAGCATGGAGGAGCCTGATT+CGG 0.489708 2.1:+14007292 None:intergenic
AGAAAGGAAGCAAGAGAGAA+AGG 0.493653 2.1:-14006756 MS.gene35712:CDS
GGCCAACGGAGCTACCGATC+CGG 0.494027 2.1:-14010559 MS.gene35712:CDS
GCTCCTCCATGCTCAACAAA+TGG 0.496661 2.1:-14007283 MS.gene35712:CDS
CACTGTTTATTGGACACAGT+TGG 0.496951 2.1:+14006420 None:intergenic
CTCTGGCAAGTACTTTGCTT+AGG 0.499755 2.1:+14007342 None:intergenic
TGCGAGCCATTTGTTGAGCA+TGG 0.501636 2.1:+14007277 None:intergenic
CGTGGCTTCCCGGAATCTGC+CGG 0.503229 2.1:+14010540 None:intergenic
TGCTAGGTCCCTTATCAGAC+AGG 0.504652 2.1:-14010508 MS.gene35712:CDS
TGGGTTTCAACTCATATGGT+GGG 0.510542 2.1:-14006848 MS.gene35712:CDS
TGCCGGATCGGTAGCTCCGT+TGG 0.513185 2.1:+14010557 None:intergenic
TTCGGTGGAGTTGCTAGGGA+CGG 0.513266 2.1:+14010587 None:intergenic
TTTACGGGAAATATTAGGGT+TGG 0.514210 2.1:-14010257 MS.gene35712:CDS
ACGGTGGTGGTATCGGTGGT+GGG 0.518078 2.1:+14010606 None:intergenic
AATTTCTTCGAGTGGTTGGA+TGG 0.518200 2.1:+14007223 None:intergenic
CTGGCTCGACCAAATTGAAG+TGG 0.519831 2.1:+14006645 None:intergenic
GATTCACGTTGGTGAAGAAA+GGG 0.521739 2.1:+14010387 None:intergenic
AGAAGGGTGAGTTATTATGT+GGG 0.524535 2.1:-14006578 MS.gene35712:CDS
AACTTCTCTTGCAAACCGGT+TGG 0.526019 2.1:+14006780 None:intergenic
GTGAACAGAAATTTCTGCAG+TGG 0.528197 2.1:+14007368 None:intergenic
TTGGGTTTCAACTCATATGG+TGG 0.534485 2.1:-14006849 MS.gene35712:CDS
TTTGCAAGAGAAGTTGAGAA+AGG 0.535515 2.1:-14006772 MS.gene35712:CDS
TCCGTTGGCCTTGCTTTCGG+TGG 0.541082 2.1:+14010572 None:intergenic
TATGATTTAATTAAAGGGGA+TGG 0.541669 2.1:-14006336 MS.gene35712:CDS
CACAATCAACGCAGCGGTGA+AGG 0.542968 2.1:+14006377 None:intergenic
AGCCACGGATGGCCATTGCT+AGG 0.543267 2.1:-14010524 MS.gene35712:CDS
CTTCCCGGAATCTGCCGGAT+CGG 0.543367 2.1:+14010545 None:intergenic
AGGGACGGTGGTGGTATCGG+TGG 0.543609 2.1:+14010602 None:intergenic
TTCTGAACCTCAACATGCTA+AGG 0.543924 2.1:-14010219 MS.gene35712:intron
TCTGGTTCATCAAACACGAC+CGG 0.544589 2.1:+14006531 None:intergenic
AAGAAGGGTGAGTTATTATG+TGG 0.548271 2.1:-14006579 MS.gene35712:CDS
GTTGTTTAATGAAGTTGTAG+AGG 0.549200 2.1:+14007147 None:intergenic
CTTCACCGCTGCGTTGATTG+TGG 0.549965 2.1:-14006376 MS.gene35712:CDS
TGGAGGAAAATTTCTTCGAG+TGG 0.550646 2.1:+14007215 None:intergenic
TGAACAGAAATTTCTGCAGT+GGG 0.551534 2.1:+14007369 None:intergenic
GGAGTTGCTAGGGACGGTGG+TGG 0.552416 2.1:+14010593 None:intergenic
TTTGGGATCAAGGGAAGGAT+CGG 0.552953 2.1:+14007319 None:intergenic
ACCAGAACTGATATCAAACC+TGG 0.557853 2.1:-14007453 MS.gene35712:CDS
GGTTTCAGAAGCTTGTAATG+AGG 0.560783 2.1:-14006557 MS.gene35712:CDS
TTTCCCGTAAATTCAACACT+AGG 0.562457 2.1:+14010269 None:intergenic
CGGCAGATTCCGGGAAGCCA+CGG 0.563660 2.1:-14010539 MS.gene35712:CDS
CTCCACTGACAAGAGCATAA+GGG 0.568207 2.1:+14007180 None:intergenic
AACCGGTGGGTTCATTCGCA+GGG 0.568675 2.1:+14006668 None:intergenic
TTCCATTACTGCCTTACAGA+AGG 0.570694 2.1:-14006310 MS.gene35712:CDS
GTTGGAACTAATAAATTCGG+TGG 0.571940 2.1:-14006700 MS.gene35712:CDS
GAACGGTTCACTAAAGAGAA+AGG 0.572715 2.1:-14006495 MS.gene35712:CDS
AGTGGTACCTTAGCATGTTG+AGG 0.575238 2.1:+14010212 None:intergenic
GTGTCCAATAAACAGTGTGC+AGG 0.576661 2.1:-14006414 MS.gene35712:CDS
TCGGTATGATTTAATTAAAG+GGG 0.578026 2.1:-14006340 MS.gene35712:CDS
AGGGAACGTGGGTGGAACAT+TGG 0.578719 2.1:+14010406 None:intergenic
CTGGTTCATCAAACACGACC+GGG 0.580825 2.1:+14006532 None:intergenic
AAGAGCATAAGGGTAAGAGA+AGG 0.584245 2.1:+14007190 None:intergenic
ACAGTTGGCGAACCAGTTTG+TGG 0.585878 2.1:+14006435 None:intergenic
AAGGGTAAGAGAAGGAATGG+AGG 0.585930 2.1:+14007198 None:intergenic
GTTTCAGAAGCTTGTAATGA+GGG 0.587067 2.1:-14006556 MS.gene35712:CDS
TAGCAACTCCACCGAAAGCA+AGG 0.588271 2.1:-14010580 MS.gene35712:CDS
GGTGGAGTTGCTAGGGACGG+TGG 0.594020 2.1:+14010590 None:intergenic
TCTGATAAGGGACCTAGCAA+TGG 0.603682 2.1:+14010512 None:intergenic
AGATTCCGGGAAGCCACGGA+TGG 0.603980 2.1:-14010535 MS.gene35712:CDS
TTGTGGCACACTTGTTACGT+CGG 0.612333 2.1:-14006359 MS.gene35712:CDS
TATCGGTGGTGGGAGTGACA+TGG 0.613140 2.1:+14010616 None:intergenic
CCAAATTGAAGTGGAACCGG+TGG 0.613875 2.1:+14006654 None:intergenic
TCCGCGTTCAATGTGAAGAA+GGG 0.615898 2.1:-14006594 MS.gene35712:CDS
TCCACCGAAAGCAAGGCCAA+CGG 0.616945 2.1:-14010573 MS.gene35712:CDS
CAGAACAATTTAAACCGGAA+CGG 0.632046 2.1:-14006512 MS.gene35712:CDS
ACGTGGGTGGAACATTGGTA+CGG 0.634090 2.1:+14010411 None:intergenic
GACCTAGCAATGGCCATCCG+TGG 0.636484 2.1:+14010522 None:intergenic
GTGAAGAAAGGGAACGTGGG+TGG 0.642657 2.1:+14010398 None:intergenic
CAACAAGGTCCATATCAAAG+AGG 0.642799 2.1:+14010324 None:intergenic
AATAATATTAGGATTCACGT+TGG 0.648803 2.1:+14010376 None:intergenic
GTTGGTGAAGAAAGGGAACG+TGG 0.649752 2.1:+14010394 None:intergenic
CTTCTACCGACTGTGAGTGT+CGG 0.652078 2.1:-14007248 MS.gene35712:CDS
AACCCTGCGAATGAACCCAC+CGG 0.654342 2.1:-14006670 MS.gene35712:CDS
ATACAAATAGTTCAATAACT+CGG 0.658718 2.1:+14006470 None:intergenic
ACCCTTCTTCACATTGAACG+CGG 0.658842 2.1:+14006593 None:intergenic
TACAACTTCATTAAACAACA+TGG 0.659594 2.1:-14007143 MS.gene35712:intron
GAAGCTTGTAATGAGGGACC+CGG 0.667156 2.1:-14006550 MS.gene35712:CDS
CAAATTGAAGTGGAACCGGT+GGG 0.672914 2.1:+14006655 None:intergenic
TTGATTGAGAGCATAACGAA+CGG 0.681802 2.1:-14006804 MS.gene35712:CDS
AAGGAAGCAAGAGAGAAAGG+CGG 0.704473 2.1:-14006753 MS.gene35712:CDS
GAGCCATTTGTTGAGCATGG+AGG 0.708844 2.1:+14007280 None:intergenic
TTGGTGAAGAAAGGGAACGT+GGG 0.709718 2.1:+14010395 None:intergenic
ATGGTGCCGACACTCACAGT+CGG 0.714178 2.1:+14007242 None:intergenic
GTGTGCCACAATCAACGCAG+CGG 0.735438 2.1:+14006371 None:intergenic
GAACAGAAATTTCTGCAGTG+GGG 0.775291 2.1:+14007370 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTTCATAAATTAAATTAAA+TGG - chr2.1:14008350-14008369 MS.gene35712:intron 10.0%
!! TTTACTTGATTTATTATTTA+AGG - chr2.1:14007802-14007821 MS.gene35712:intron 10.0%
!!! ATTATTTATTGTACTTTTTT+CGG - chr2.1:14007930-14007949 MS.gene35712:intron 10.0%
!!! ATTTCAATAAAATTTTTGTT+TGG + chr2.1:14008411-14008430 None:intergenic 10.0%
!!! TTTCTAGTTAAAAAATTTAA+CGG - chr2.1:14007859-14007878 MS.gene35712:intron 10.0%
!! ATGATTAATAAGTAAACTAA+AGG - chr2.1:14008564-14008583 MS.gene35712:intron 15.0%
!! GACTATTTATTATAAATTCA+AGG - chr2.1:14007662-14007681 MS.gene35712:intron 15.0%
!! TATCAAAAAAACATTATGTA+CGG - chr2.1:14007260-14007279 MS.gene35712:CDS 15.0%
!! TTAAAATGATATGTTAATAG+TGG + chr2.1:14007566-14007585 None:intergenic 15.0%
!!! AATGTTTTTACATTACAATA+CGG + chr2.1:14008523-14008542 None:intergenic 15.0%
!!! AATTGATAGAAAGATTTTTT+TGG - chr2.1:14008906-14008925 MS.gene35712:intron 15.0%
!!! ATAAGTCTATGATTTTTATT+AGG - chr2.1:14007196-14007215 MS.gene35712:CDS 15.0%
!!! GATTTTAAAATAATTTGTAG+GGG + chr2.1:14008113-14008132 None:intergenic 15.0%
!!! GGATTTTAAAATAATTTGTA+GGG + chr2.1:14008114-14008133 None:intergenic 15.0%
!!! TAATAAACAATATTGATAAC+AGG - chr2.1:14009971-14009990 MS.gene35712:intron 15.0%
!!! TATTTTCAAATTTTAGTGAT+GGG - chr2.1:14008071-14008090 MS.gene35712:intron 15.0%
!!! TGGATTTTAAAATAATTTGT+AGG + chr2.1:14008115-14008134 None:intergenic 15.0%
!!! TGTTATATTTTGACAAAAAT+TGG - chr2.1:14008024-14008043 MS.gene35712:intron 15.0%
!!! TTATTTTCAAATTTTAGTGA+TGG - chr2.1:14008070-14008089 MS.gene35712:intron 15.0%
!! AAAAAAATTGAAAAGTTGTG+AGG + chr2.1:14008955-14008974 None:intergenic 20.0%
!! AAAATGACAAGGAAAATTTA+TGG + chr2.1:14006874-14006893 None:intergenic 20.0%
!! AAATATTGCATAATATTCAG+AGG - chr2.1:14009301-14009320 MS.gene35712:intron 20.0%
!! AAGAATCAGAAAAATTGAAA+TGG - chr2.1:14008618-14008637 MS.gene35712:intron 20.0%
!! AATGACATCTTACATATTTA+AGG - chr2.1:14007028-14007047 MS.gene35712:intron 20.0%
!! AGTTATTGAACTATTTGTAT+TGG - chr2.1:14010449-14010468 MS.gene35712:CDS 20.0%
!! ATACAAATAGTTCAATAACT+CGG + chr2.1:14010449-14010468 None:intergenic 20.0%
!! ATAGGATAGTTATGATTAAT+TGG - chr2.1:14007125-14007144 MS.gene35712:intron 20.0%
!! ATCAAAAAAACATTATGTAC+GGG - chr2.1:14007261-14007280 MS.gene35712:CDS 20.0%
!! ATCAAAAGAAATAAGAAAGT+AGG + chr2.1:14006739-14006758 None:intergenic 20.0%
!! ATTGACAAAAATGGTAAAAT+TGG + chr2.1:14008135-14008154 None:intergenic 20.0%
!! TAGTTAAAAAATTTAACGGT+AGG - chr2.1:14007863-14007882 MS.gene35712:intron 20.0%
!! TATGAAATATTAATCTGCAT+GGG - chr2.1:14007237-14007256 MS.gene35712:CDS 20.0%
!! TATGAACTGGTAATTAAAAT+TGG + chr2.1:14009281-14009300 None:intergenic 20.0%
!! TTATGAAATATTAATCTGCA+TGG - chr2.1:14007236-14007255 MS.gene35712:CDS 20.0%
!!! AAGATATTTTTGTTATCGTA+TGG - chr2.1:14007744-14007763 MS.gene35712:intron 20.0%
!!! AATTTTACCCTTTATATCAT+TGG + chr2.1:14008690-14008709 None:intergenic 20.0%
!!! ATATGAATGTTTTCAATGAT+AGG - chr2.1:14007107-14007126 MS.gene35712:intron 20.0%
!!! ATCATAGATCAATTTCATTT+TGG - chr2.1:14008466-14008485 MS.gene35712:intron 20.0%
!!! ATGTTTTTACATTACAATAC+GGG + chr2.1:14008522-14008541 None:intergenic 20.0%
!!! ATTTTCAAATTTTAGTGATG+GGG - chr2.1:14008072-14008091 MS.gene35712:intron 20.0%
!!! TAGAAAACCTTAAATTTTGT+CGG + chr2.1:14007845-14007864 None:intergenic 20.0%
!!! TCATAGATCAATTTCATTTT+GGG - chr2.1:14008467-14008486 MS.gene35712:intron 20.0%
!!! TTATGCAATATTTTATGAAC+TGG + chr2.1:14009294-14009313 None:intergenic 20.0%
!!! TTCTTTTGTTAGTAATTGTA+TGG + chr2.1:14006964-14006983 None:intergenic 20.0%
!!! TTTAATTTATGAAAGAACCA+AGG + chr2.1:14008345-14008364 None:intergenic 20.0%
!!! TTTTTTTCCGACAAAATTTA+AGG - chr2.1:14007835-14007854 MS.gene35712:intron 20.0%
! AAAAGAAATAAGAAAGTAGG+TGG + chr2.1:14006736-14006755 None:intergenic 25.0%
! AATAATATTAGGATTCACGT+TGG + chr2.1:14006543-14006562 None:intergenic 25.0%
! AATCTTTCTATCAATTGTCA+TGG + chr2.1:14008902-14008921 None:intergenic 25.0%
! AGAGTTGGAACTAATAAATT+CGG - chr2.1:14010213-14010232 MS.gene35712:intron 25.0%
! ATATGTTAATAGTGGCATAT+CGG + chr2.1:14007558-14007577 None:intergenic 25.0%
! ATTTGAACAACAAAATGACA+AGG + chr2.1:14006885-14006904 None:intergenic 25.0%
! CTGAGACAAATTGTAAAAAA+AGG - chr2.1:14007285-14007304 MS.gene35712:CDS 25.0%
! GTCGGTATGATTTAATTAAA+GGG - chr2.1:14010575-14010594 MS.gene35712:CDS 25.0%
! GTGAAATCCAATGATATAAA+GGG - chr2.1:14008680-14008699 MS.gene35712:intron 25.0%
! TACAACTTCATTAAACAACA+TGG - chr2.1:14009773-14009792 MS.gene35712:intron 25.0%
! TATGATTTAATTAAAGGGGA+TGG - chr2.1:14010580-14010599 MS.gene35712:CDS 25.0%
! TATTAGGAAAATTATGTCGA+AGG - chr2.1:14007212-14007231 MS.gene35712:CDS 25.0%
! TCAAGAACTGCAATAATATT+AGG + chr2.1:14006554-14006573 None:intergenic 25.0%
! TCGAGAGATTTCAAATAATA+CGG + chr2.1:14008860-14008879 None:intergenic 25.0%
! TCGGTATGATTTAATTAAAG+GGG - chr2.1:14010576-14010595 MS.gene35712:CDS 25.0%
! TGAATTTACGGGAAATATTA+GGG - chr2.1:14006655-14006674 MS.gene35712:CDS 25.0%
! TTGAATTTACGGGAAATATT+AGG - chr2.1:14006654-14006673 MS.gene35712:CDS 25.0%
!! AAATAATTTGTAGGGGTATA+TGG + chr2.1:14008106-14008125 None:intergenic 25.0%
!! AACAATATTGATAACAGGTA+AGG - chr2.1:14009976-14009995 MS.gene35712:intron 25.0%
!! AACTATTTGTATTGGTCTAA+TGG - chr2.1:14010457-14010476 MS.gene35712:CDS 25.0%
!! AACTTTATTTGCGAGTTTAA+AGG - chr2.1:14009027-14009046 MS.gene35712:intron 25.0%
!! ACTATTTGTATTGGTCTAAT+GGG - chr2.1:14010458-14010477 MS.gene35712:CDS 25.0%
!! ACTTTATTTGCGAGTTTAAA+GGG - chr2.1:14009028-14009047 MS.gene35712:intron 25.0%
!! AGATTTTCTTCTTACTTGTA+GGG - chr2.1:14008711-14008730 MS.gene35712:intron 25.0%
!! ATATGACTGTATTTCTATTG+TGG + chr2.1:14009333-14009352 None:intergenic 25.0%
!! CATAGATCAATTTCATTTTG+GGG - chr2.1:14008468-14008487 MS.gene35712:intron 25.0%
!! TTTTCACATCATTATTTGCT+GGG + chr2.1:14009921-14009940 None:intergenic 25.0%
!! TTTTTCACATCATTATTTGC+TGG + chr2.1:14009922-14009941 None:intergenic 25.0%
!!! CAAATGTATCTTTAGTTTGT+CGG - chr2.1:14006900-14006919 MS.gene35712:CDS 25.0%
AAATACAAGCCTTGAAACAA+TGG + chr2.1:14008804-14008823 None:intergenic 30.0%
AAATGTTTCCGAAAACCAAA+CGG + chr2.1:14009150-14009169 None:intergenic 30.0%
AAATTGAAAAGTTGTGAGGA+TGG + chr2.1:14008951-14008970 None:intergenic 30.0%
AATACAAGCCTTGAAACAAT+GGG + chr2.1:14008803-14008822 None:intergenic 30.0%
ACTTTGCTTCAAAATGTTCA+TGG + chr2.1:14009429-14009448 None:intergenic 30.0%
AGTATAAGTGTATGGGTATA+TGG - chr2.1:14008739-14008758 MS.gene35712:intron 30.0%
ATAATCTAACCTGTCTGATA+AGG + chr2.1:14006420-14006439 None:intergenic 30.0%
ATGGTATAATTTCCTAGTGA+TGG - chr2.1:14008758-14008777 MS.gene35712:intron 30.0%
ATTCGTAGATGCAAAATTGA+AGG - chr2.1:14008540-14008559 MS.gene35712:intron 30.0%
ATTTGTACCAACATAGTTAC+AGG + chr2.1:14008291-14008310 None:intergenic 30.0%
CAAAATATCCCATTGTTTCA+AGG - chr2.1:14008792-14008811 MS.gene35712:intron 30.0%
CAGAAAAATTGAAATGGTGA+AGG - chr2.1:14008624-14008643 MS.gene35712:intron 30.0%
CGAGAGATTTCAAATAATAC+GGG + chr2.1:14008859-14008878 None:intergenic 30.0%
CGTCGGTATGATTTAATTAA+AGG - chr2.1:14010574-14010593 MS.gene35712:CDS 30.0%
GAGATATTATTTCAACTGCA+TGG + chr2.1:14007408-14007427 None:intergenic 30.0%
GAGATTTATTCACAAATACC+AGG + chr2.1:14008202-14008221 None:intergenic 30.0%
GAGTTGACATAAAAACTCTA+GGG - chr2.1:14009123-14009142 MS.gene35712:intron 30.0%
GGTGAAATCCAATGATATAA+AGG - chr2.1:14008679-14008698 MS.gene35712:intron 30.0%
GTGAAGTCAATTGACAAAAA+TGG + chr2.1:14008144-14008163 None:intergenic 30.0%
GTTGTTTAATGAAGTTGTAG+AGG + chr2.1:14009772-14009791 None:intergenic 30.0%
TAATCTAACCTGTCTGATAA+GGG + chr2.1:14006419-14006438 None:intergenic 30.0%
TACAATACGGGAAAGAATAA+TGG + chr2.1:14008510-14008529 None:intergenic 30.0%
TGAACCAGAACAATTTAAAC+CGG - chr2.1:14010399-14010418 MS.gene35712:CDS 30.0%
TTAGTAAAAGGAAGGAGTAA+AGG - chr2.1:14009064-14009083 MS.gene35712:intron 30.0%
TTTGCAGTTTCATACATTCA+TGG + chr2.1:14006846-14006865 None:intergenic 30.0%
! AACAGCTTTGTAGAATAAAG+AGG - chr2.1:14008442-14008461 MS.gene35712:intron 30.0%
! ATCAAACCTGGACATATTTT+TGG - chr2.1:14009475-14009494 MS.gene35712:intron 30.0%
! CTCGACTTTGGTATATTTTT+GGG - chr2.1:14008875-14008894 MS.gene35712:intron 30.0%
! CTGTATTTCTATTGTGGATT+AGG + chr2.1:14009327-14009346 None:intergenic 30.0%
! CTTTATTTGCGAGTTTAAAG+GGG - chr2.1:14009029-14009048 MS.gene35712:intron 30.0%
! GAGATTTTCTTCTTACTTGT+AGG - chr2.1:14008710-14008729 MS.gene35712:intron 30.0%
! GATTTTCTTCTTACTTGTAG+GGG - chr2.1:14008712-14008731 MS.gene35712:intron 30.0%
! GTTATGCTCTCAATCAATTT+TGG + chr2.1:14010109-14010128 None:intergenic 30.0%
! TATTTGAAATCTCTCGACTT+TGG - chr2.1:14008863-14008882 MS.gene35712:intron 30.0%
! TCTCGACTTTGGTATATTTT+TGG - chr2.1:14008874-14008893 MS.gene35712:intron 30.0%
! TGAGTTGACATAAAAACTCT+AGG - chr2.1:14009122-14009141 MS.gene35712:intron 30.0%
! TGTTCCTAGTGTTGAATTTA+CGG - chr2.1:14006643-14006662 MS.gene35712:CDS 30.0%
! TTTCACATCATTATTTGCTG+GGG + chr2.1:14009920-14009939 None:intergenic 30.0%
!! TTTTTGTTATCGTATGGACT+AGG - chr2.1:14007750-14007769 MS.gene35712:intron 30.0%
!!! AAACTTTTTCAGAACACGAA+TGG - chr2.1:14006460-14006479 MS.gene35712:CDS 30.0%
AAAACACACCACCATAATCT+AGG + chr2.1:14008834-14008853 None:intergenic 35.0%
AAGAAGGGTGAGTTATTATG+TGG - chr2.1:14010337-14010356 MS.gene35712:CDS 35.0%
AAGGAAGGAGTAAAGGAAAA+TGG - chr2.1:14009071-14009090 MS.gene35712:intron 35.0%
AATTGAAATGGTGAAGGAGA+AGG - chr2.1:14008630-14008649 MS.gene35712:intron 35.0%
ACAGAAAATGTATTCTGTGG+GGG + chr2.1:14008168-14008187 None:intergenic 35.0%
AGAAGGGTGAGTTATTATGT+GGG - chr2.1:14010338-14010357 MS.gene35712:CDS 35.0%
ATAAAAAGTGGAACGGAGTT+CGG - chr2.1:14010004-14010023 MS.gene35712:intron 35.0%
ATCCATTAATTACAACGCCT+TGG - chr2.1:14008325-14008344 MS.gene35712:intron 35.0%
CACAGAAAATGTATTCTGTG+GGG + chr2.1:14008169-14008188 None:intergenic 35.0%
CAGAACAATTTAAACCGGAA+CGG - chr2.1:14010404-14010423 MS.gene35712:CDS 35.0%
CAGACAGGTTAGATTATTTC+TGG - chr2.1:14006423-14006442 MS.gene35712:CDS 35.0%
GAAAATATCGATAACGTGCT+TGG - chr2.1:14009250-14009269 MS.gene35712:intron 35.0%
GAAGCAAAGTTCAAGCATAT+GGG - chr2.1:14009439-14009458 MS.gene35712:intron 35.0%
GACAAAAGAGATGTTCTAGT+TGG - chr2.1:14006614-14006633 MS.gene35712:CDS 35.0%
GCACAGAAAATGTATTCTGT+GGG + chr2.1:14008170-14008189 None:intergenic 35.0%
GGAAGTGATAAAAAGTGGAA+CGG - chr2.1:14009997-14010016 MS.gene35712:intron 35.0%
GGTAAGGAAGTGATAAAAAG+TGG - chr2.1:14009992-14010011 MS.gene35712:intron 35.0%
GTCAACTCATACTCAAGTTA+GGG + chr2.1:14009111-14009130 None:intergenic 35.0%
GTGTAAGTTGTCACTATATC+TGG + chr2.1:14007890-14007909 None:intergenic 35.0%
GTTGGAACTAATAAATTCGG+TGG - chr2.1:14010216-14010235 MS.gene35712:intron 35.0%
GTTTCAGAAGCTTGTAATGA+GGG - chr2.1:14010360-14010379 MS.gene35712:CDS 35.0%
TCAACTCATACTCAAGTTAG+GGG + chr2.1:14009110-14009129 None:intergenic 35.0%
TGAACAGAAATTTCTGCAGT+GGG + chr2.1:14009550-14009569 None:intergenic 35.0%
TGAAGCAAAGTTCAAGCATA+TGG - chr2.1:14009438-14009457 MS.gene35712:intron 35.0%
TGTCAACTCATACTCAAGTT+AGG + chr2.1:14009112-14009131 None:intergenic 35.0%
TTATGAACTTTCTGACTCAG+TGG - chr2.1:14006792-14006811 MS.gene35712:CDS 35.0%
TTTACGGGAAATATTAGGGT+TGG - chr2.1:14006659-14006678 MS.gene35712:CDS 35.0%
TTTCCCGTAAATTCAACACT+AGG + chr2.1:14006650-14006669 None:intergenic 35.0%
TTTCTCTCACCTCTTTGATA+TGG - chr2.1:14006583-14006602 MS.gene35712:CDS 35.0%
TTTGCAAGAGAAGTTGAGAA+AGG - chr2.1:14010144-14010163 MS.gene35712:intron 35.0%
TTTGGTCCAAAAATATGTCC+AGG + chr2.1:14009484-14009503 None:intergenic 35.0%
! AGGAGAGGACTTTTAGTAAA+AGG - chr2.1:14009052-14009071 MS.gene35712:intron 35.0%
! CACAAATACCAGGAAACTTT+TGG + chr2.1:14008192-14008211 None:intergenic 35.0%
! GAACATCTCTTTTGTCAACA+AGG + chr2.1:14006610-14006629 None:intergenic 35.0%
! GAGGACTTTTAGTAAAAGGA+AGG - chr2.1:14009056-14009075 MS.gene35712:intron 35.0%
! GGGTGAAAGTATAAGTGTAT+GGG - chr2.1:14008732-14008751 MS.gene35712:intron 35.0%
! GTTCCTAGTGTTGAATTTAC+GGG - chr2.1:14006644-14006663 MS.gene35712:CDS 35.0%
! GTTTGACTCGTTAAAAGAGT+TGG - chr2.1:14010198-14010217 MS.gene35712:intron 35.0%
! TGCTCTCAATCAATTTTGGA+AGG + chr2.1:14010105-14010124 None:intergenic 35.0%
! TGGGATATTTTGCTTGTTTG+TGG + chr2.1:14008784-14008803 None:intergenic 35.0%
! TTGATTGAGAGCATAACGAA+CGG - chr2.1:14010112-14010131 MS.gene35712:intron 35.0%
!! AACCAAGGCGTTGTAATTAA+TGG + chr2.1:14008330-14008349 None:intergenic 35.0%
!! AGAGATGGAATCAGTTTTGT+GGG - chr2.1:14008656-14008675 MS.gene35712:intron 35.0%
!! TAGACAGTGTTGCTTCAATT+TGG + chr2.1:14009502-14009521 None:intergenic 35.0%
!!! CACAACTTGCTTTTTGTGTT+GGG - chr2.1:14010049-14010068 MS.gene35712:intron 35.0%
!!! CGTGTTCTGAAAAAGTTTTC+TGG + chr2.1:14006458-14006477 None:intergenic 35.0%
!!! TGAAAAAGTTTTCTGGCTTC+TGG + chr2.1:14006451-14006470 None:intergenic 35.0%
AATTTCTTCGAGTGGTTGGA+TGG + chr2.1:14009696-14009715 None:intergenic 40.0%
ACCAACATAGTTACAGGCAT+GGG + chr2.1:14008285-14008304 None:intergenic 40.0%
ACCAGAACTGATATCAAACC+TGG - chr2.1:14009463-14009482 MS.gene35712:intron 40.0%
AGAAAGGAAGCAAGAGAGAA+AGG - chr2.1:14010160-14010179 MS.gene35712:intron 40.0%
AGGATGGAAAGACAAATGTG+TGG + chr2.1:14008935-14008954 None:intergenic 40.0%
ATAATTGGGGAGTTGAACAG+AGG + chr2.1:14008260-14008279 None:intergenic 40.0%
ATTTAGCCCAGCCTAGATTA+TGG - chr2.1:14008820-14008839 MS.gene35712:intron 40.0%
CAACAAGGTCCATATCAAAG+AGG + chr2.1:14006595-14006614 None:intergenic 40.0%
CAATAAACAGTGTGCAGGTA+AGG - chr2.1:14010507-14010526 MS.gene35712:CDS 40.0%
CACTGTTTATTGGACACAGT+TGG + chr2.1:14010499-14010518 None:intergenic 40.0%
CATAAGGGTAAGAGAAGGAA+TGG + chr2.1:14009724-14009743 None:intergenic 40.0%
CCAACACAAAAAGCAAGTTG+TGG + chr2.1:14010051-14010070 None:intergenic 40.0%
CGTTCCGGTTTAAATTGTTC+TGG + chr2.1:14010406-14010425 None:intergenic 40.0%
CTTACCTGCACACTGTTTAT+TGG + chr2.1:14010509-14010528 None:intergenic 40.0%
GAACAGAAATTTCTGCAGTG+GGG + chr2.1:14009549-14009568 None:intergenic 40.0%
GAACGGTTCACTAAAGAGAA+AGG - chr2.1:14010421-14010440 MS.gene35712:CDS 40.0%
GGAAAATTTCTTCGAGTGGT+TGG + chr2.1:14009700-14009719 None:intergenic 40.0%
GGCACAGAAAATGTATTCTG+TGG + chr2.1:14008171-14008190 None:intergenic 40.0%
GGTTTCAGAAGCTTGTAATG+AGG - chr2.1:14010359-14010378 MS.gene35712:CDS 40.0%
GTGAACAGAAATTTCTGCAG+TGG + chr2.1:14009551-14009570 None:intergenic 40.0%
GTGTTGGGTTTCAACTCATA+TGG - chr2.1:14010064-14010083 MS.gene35712:intron 40.0%
TAAAAAGTGGAACGGAGTTC+GGG - chr2.1:14010005-14010024 MS.gene35712:intron 40.0%
TACAGGCATGGGAGATAATT+GGG + chr2.1:14008274-14008293 None:intergenic 40.0%
TACCAACATAGTTACAGGCA+TGG + chr2.1:14008286-14008305 None:intergenic 40.0%
TATTTGCGAGTTTAAAGGGG+AGG - chr2.1:14009032-14009051 MS.gene35712:intron 40.0%
TCACGTAGTATACTTCATGC+AGG - chr2.1:14009391-14009410 MS.gene35712:intron 40.0%
TCCAGGTTTGATATCAGTTC+TGG + chr2.1:14009467-14009486 None:intergenic 40.0%
TCTCAACTTCTCTTGCAAAC+CGG + chr2.1:14010143-14010162 None:intergenic 40.0%
TGGAGGAAAATTTCTTCGAG+TGG + chr2.1:14009704-14009723 None:intergenic 40.0%
TGGGTTTCAACTCATATGGT+GGG - chr2.1:14010068-14010087 MS.gene35712:intron 40.0%
TTACAGGCATGGGAGATAAT+TGG + chr2.1:14008275-14008294 None:intergenic 40.0%
TTCCATTACTGCCTTACAGA+AGG - chr2.1:14010606-14010625 MS.gene35712:CDS 40.0%
TTCTCTTTAGTGAACCGTTC+CGG + chr2.1:14010421-14010440 None:intergenic 40.0%
TTCTGAACCTCAACATGCTA+AGG - chr2.1:14006697-14006716 MS.gene35712:CDS 40.0%
TTGGGTTTCAACTCATATGG+TGG - chr2.1:14010067-14010086 MS.gene35712:intron 40.0%
TTTCTGTGCCAAAAGTTTCC+TGG - chr2.1:14008181-14008200 MS.gene35712:intron 40.0%
! AAGAGCATAAGGGTAAGAGA+AGG + chr2.1:14009729-14009748 None:intergenic 40.0%
! GAGAGATGGAATCAGTTTTG+TGG - chr2.1:14008655-14008674 MS.gene35712:intron 40.0%
! GATTCACGTTGGTGAAGAAA+GGG + chr2.1:14006532-14006551 None:intergenic 40.0%
! GGGGTGAAAGTATAAGTGTA+TGG - chr2.1:14008731-14008750 MS.gene35712:intron 40.0%
!! AGATGGAATCAGTTTTGTGG+GGG - chr2.1:14008658-14008677 MS.gene35712:intron 40.0%
!! GAGATGGAATCAGTTTTGTG+GGG - chr2.1:14008657-14008676 MS.gene35712:intron 40.0%
!! TAAAAACTCTAGGGTCCGTT+TGG - chr2.1:14009132-14009151 MS.gene35712:intron 40.0%
!! TGTTATCGTATGGACTAGGA+TGG - chr2.1:14007754-14007773 MS.gene35712:intron 40.0%
!!! CCACAACTTGCTTTTTGTGT+TGG - chr2.1:14010048-14010067 MS.gene35712:intron 40.0%
AACTTCTCTTGCAAACCGGT+TGG + chr2.1:14010139-14010158 None:intergenic 45.0%
AAGGAAGCAAGAGAGAAAGG+CGG - chr2.1:14010163-14010182 MS.gene35712:intron 45.0%
AAGGGTAAGAGAAGGAATGG+AGG + chr2.1:14009721-14009740 None:intergenic 45.0%
ACACCACCATAATCTAGGCT+GGG + chr2.1:14008829-14008848 None:intergenic 45.0%
ACAGGCATGGGAGATAATTG+GGG + chr2.1:14008273-14008292 None:intergenic 45.0%
ACCCTTCTTCACATTGAACG+CGG + chr2.1:14010326-14010345 None:intergenic 45.0%
AGAAAGGCGGTTCAACTCTT+GGG - chr2.1:14010176-14010195 MS.gene35712:intron 45.0%
AGTGGTACCTTAGCATGTTG+AGG + chr2.1:14006707-14006726 None:intergenic 45.0%
CAAATTGAAGTGGAACCGGT+GGG + chr2.1:14010264-14010283 None:intergenic 45.0%
CAACTTACACTAGACGCTCA+AGG - chr2.1:14007900-14007919 MS.gene35712:intron 45.0%
CGACCAAATTGAAGTGGAAC+CGG + chr2.1:14010268-14010287 None:intergenic 45.0%
CTCTGGCAAGTACTTTGCTT+AGG + chr2.1:14009577-14009596 None:intergenic 45.0%
GTGTCCAATAAACAGTGTGC+AGG - chr2.1:14010502-14010521 MS.gene35712:CDS 45.0%
TACCCTTATGCTCTTGTCAG+TGG - chr2.1:14009734-14009753 MS.gene35712:intron 45.0%
TCCCATGCCTGTAACTATGT+TGG - chr2.1:14008281-14008300 MS.gene35712:intron 45.0%
TCCGCGTTCAATGTGAAGAA+GGG - chr2.1:14010322-14010341 MS.gene35712:CDS 45.0%
TCTGATAAGGGACCTAGCAA+TGG + chr2.1:14006407-14006426 None:intergenic 45.0%
TGAAGGAGAAGGAAGAGAGA+TGG - chr2.1:14008641-14008660 MS.gene35712:intron 45.0%
TTGGTGAAGAAAGGGAACGT+GGG + chr2.1:14006524-14006543 None:intergenic 45.0%
! CTCCACTGACAAGAGCATAA+GGG + chr2.1:14009739-14009758 None:intergenic 45.0%
! GGATTCACGTTGGTGAAGAA+AGG + chr2.1:14006533-14006552 None:intergenic 45.0%
! TCTCCACTGACAAGAGCATA+AGG + chr2.1:14009740-14009759 None:intergenic 45.0%
! TCTGGTTCATCAAACACGAC+CGG + chr2.1:14010388-14010407 None:intergenic 45.0%
! TTGTGGCACACTTGTTACGT+CGG - chr2.1:14010557-14010576 MS.gene35712:CDS 45.0%
! TTTGGGATCAAGGGAAGGAT+CGG + chr2.1:14009600-14009619 None:intergenic 45.0%
!! ATCGTATGGACTAGGATGGT+GGG - chr2.1:14007758-14007777 MS.gene35712:intron 45.0%
!! GAAAGTAGGTGGTGTCATAG+TGG + chr2.1:14006725-14006744 None:intergenic 45.0%
!! TATCGTATGGACTAGGATGG+TGG - chr2.1:14007757-14007776 MS.gene35712:intron 45.0%
!!! ATTCGGCGATTTTGGGATCA+AGG + chr2.1:14009610-14009629 None:intergenic 45.0%
!!! TCTAGGGTCCGTTTGGTTTT+CGG - chr2.1:14009139-14009158 MS.gene35712:intron 45.0%
!!! TTCGGCGATTTTGGGATCAA+GGG + chr2.1:14009609-14009628 None:intergenic 45.0%
!!! AATAACTATTTTTTTTTATA+AGG - chr2.1:14007437-14007456 MS.gene35712:CDS 5.0%
!!! TTCTTTAAAAATATTATTTT+TGG - chr2.1:14008975-14008994 MS.gene35712:intron 5.0%
ACAGTTGGCGAACCAGTTTG+TGG + chr2.1:14010484-14010503 None:intergenic 50.0%
ACGTGGGTGGAACATTGGTA+CGG + chr2.1:14006508-14006527 None:intergenic 50.0%
AGCATAACGAACGGTCCAAC+CGG - chr2.1:14010121-14010140 MS.gene35712:intron 50.0%
CACACCACCATAATCTAGGC+TGG + chr2.1:14008830-14008849 None:intergenic 50.0%
CCAAATTGAAGTGGAACCGG+TGG + chr2.1:14010265-14010284 None:intergenic 50.0%
CTCCGCGTTCAATGTGAAGA+AGG - chr2.1:14010321-14010340 MS.gene35712:CDS 50.0%
CTGGTTCATCAAACACGACC+GGG + chr2.1:14010387-14010406 None:intergenic 50.0%
GAAGCTTGTAATGAGGGACC+CGG - chr2.1:14010366-14010385 MS.gene35712:CDS 50.0%
GAGAAAGGCGGTTCAACTCT+TGG - chr2.1:14010175-14010194 MS.gene35712:intron 50.0%
GATCCCAAAATCGCCGAATC+AGG - chr2.1:14009611-14009630 MS.gene35712:intron 50.0%
GCTCCTCCATGCTCAACAAA+TGG - chr2.1:14009633-14009652 MS.gene35712:intron 50.0%
GCTTGTTTGTGGCCATCACT+AGG + chr2.1:14008773-14008792 None:intergenic 50.0%
GGCCTTCTGTAAGGCAGTAA+TGG + chr2.1:14010611-14010630 None:intergenic 50.0%
TAGCAACTCCACCGAAAGCA+AGG - chr2.1:14006336-14006355 MS.gene35712:CDS 50.0%
TAGCCCAGCCTAGATTATGG+TGG - chr2.1:14008823-14008842 MS.gene35712:intron 50.0%
TGCTAGGTCCCTTATCAGAC+AGG - chr2.1:14006408-14006427 MS.gene35712:CDS 50.0%
TGCTTTCGGTGGAGTTGCTA+GGG + chr2.1:14006336-14006355 None:intergenic 50.0%
TTGCTTTCGGTGGAGTTGCT+AGG + chr2.1:14006337-14006356 None:intergenic 50.0%
! CTGGCTCGACCAAATTGAAG+TGG + chr2.1:14010274-14010293 None:intergenic 50.0%
! CTTCTACCGACTGTGAGTGT+CGG - chr2.1:14009668-14009687 MS.gene35712:intron 50.0%
! GAGCCATTTGTTGAGCATGG+AGG + chr2.1:14009639-14009658 None:intergenic 50.0%
! GTTGGTGAAGAAAGGGAACG+TGG + chr2.1:14006525-14006544 None:intergenic 50.0%
! TGCGAGCCATTTGTTGAGCA+TGG + chr2.1:14009642-14009661 None:intergenic 50.0%
! TGGTCTAATGGGCCACAAAC+TGG - chr2.1:14010469-14010488 MS.gene35712:CDS 50.0%
!! CCACCGGTTCCACTTCAATT+TGG - chr2.1:14010262-14010281 MS.gene35712:CDS 50.0%
!!! GAGCCTGATTCGGCGATTTT+GGG + chr2.1:14009617-14009636 None:intergenic 50.0%
!!! GCGATTTTGGGATCAAGGGA+AGG + chr2.1:14009605-14009624 None:intergenic 50.0%
AACCCTGCGAATGAACCCAC+CGG - chr2.1:14010246-14010265 MS.gene35712:CDS 55.0%
AGGGAACGTGGGTGGAACAT+TGG + chr2.1:14006513-14006532 None:intergenic 55.0%
CACAATCAACGCAGCGGTGA+AGG + chr2.1:14010542-14010561 None:intergenic 55.0%
GAGCATGGAGGAGCCTGATT+CGG + chr2.1:14009627-14009646 None:intergenic 55.0%
GCGAGTTTAAAGGGGAGGAG+AGG - chr2.1:14009037-14009056 MS.gene35712:intron 55.0%
GTGAAGAAAGGGAACGTGGG+TGG + chr2.1:14006521-14006540 None:intergenic 55.0%
GTGTGCCACAATCAACGCAG+CGG + chr2.1:14010548-14010567 None:intergenic 55.0%
TCCACCGAAAGCAAGGCCAA+CGG - chr2.1:14006343-14006362 MS.gene35712:CDS 55.0%
TTCGGTGGAGTTGCTAGGGA+CGG + chr2.1:14006332-14006351 None:intergenic 55.0%
! AACCGGTGGGTTCATTCGCA+GGG + chr2.1:14010251-14010270 None:intergenic 55.0%
! ATCAAGGGAAGGATCGGCTC+TGG + chr2.1:14009594-14009613 None:intergenic 55.0%
!! AGCTCCGTTGGCCTTGCTTT+CGG + chr2.1:14006350-14006369 None:intergenic 55.0%
!! ATGGTGCCGACACTCACAGT+CGG + chr2.1:14009677-14009696 None:intergenic 55.0%
!! CTTCACCGCTGCGTTGATTG+TGG - chr2.1:14010540-14010559 MS.gene35712:CDS 55.0%
!!! GGAGCCTGATTCGGCGATTT+TGG + chr2.1:14009618-14009637 None:intergenic 55.0%
AATGGCCATCCGTGGCTTCC+CGG + chr2.1:14006389-14006408 None:intergenic 60.0%
AGATTCCGGGAAGCCACGGA+TGG - chr2.1:14006381-14006400 MS.gene35712:CDS 60.0%
AGCCACGGATGGCCATTGCT+AGG - chr2.1:14006392-14006411 MS.gene35712:CDS 60.0%
CTACCGATCCGGCAGATTCC+GGG - chr2.1:14006368-14006387 MS.gene35712:CDS 60.0%
CTTCCCGGAATCTGCCGGAT+CGG + chr2.1:14006374-14006393 None:intergenic 60.0%
GACCTAGCAATGGCCATCCG+TGG + chr2.1:14006397-14006416 None:intergenic 60.0%
GCTACCGATCCGGCAGATTC+CGG - chr2.1:14006367-14006386 MS.gene35712:CDS 60.0%
! GAACCGGTGGGTTCATTCGC+AGG + chr2.1:14010252-14010271 None:intergenic 60.0%
! GCTAGGGACGGTGGTGGTAT+CGG + chr2.1:14006320-14006339 None:intergenic 60.0%
!! ACGGTGGTGGTATCGGTGGT+GGG + chr2.1:14006313-14006332 None:intergenic 60.0%
!! TCCGTTGGCCTTGCTTTCGG+TGG + chr2.1:14006347-14006366 None:intergenic 60.0%
CGGCAGATTCCGGGAAGCCA+CGG - chr2.1:14006377-14006396 MS.gene35712:CDS 65.0%
CGTGGCTTCCCGGAATCTGC+CGG + chr2.1:14006379-14006398 None:intergenic 65.0%
GGAGTTGCTAGGGACGGTGG+TGG + chr2.1:14006326-14006345 None:intergenic 65.0%
GGCCAACGGAGCTACCGATC+CGG - chr2.1:14006357-14006376 MS.gene35712:CDS 65.0%
GGTGGAGTTGCTAGGGACGG+TGG + chr2.1:14006329-14006348 None:intergenic 65.0%
TGCCGGATCGGTAGCTCCGT+TGG + chr2.1:14006362-14006381 None:intergenic 65.0%
! AGGGACGGTGGTGGTATCGG+TGG + chr2.1:14006317-14006336 None:intergenic 65.0%
!! GACGGTGGTGGTATCGGTGG+TGG + chr2.1:14006314-14006333 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 14006302 14010636 14006302 ID=MS.gene35712
chr2.1 mRNA 14006302 14010636 14006302 ID=MS.gene35712.t1;Parent=MS.gene35712
chr2.1 exon 14010220 14010636 14010220 ID=MS.gene35712.t1.exon1;Parent=MS.gene35712.t1
chr2.1 CDS 14010220 14010636 14010220 ID=cds.MS.gene35712.t1;Parent=MS.gene35712.t1
chr2.1 exon 14007144 14007525 14007144 ID=MS.gene35712.t1.exon2;Parent=MS.gene35712.t1
chr2.1 CDS 14007144 14007525 14007144 ID=cds.MS.gene35712.t1;Parent=MS.gene35712.t1
chr2.1 exon 14006302 14006945 14006302 ID=MS.gene35712.t1.exon3;Parent=MS.gene35712.t1
chr2.1 CDS 14006302 14006945 14006302 ID=cds.MS.gene35712.t1;Parent=MS.gene35712.t1
Gene Sequence

>MS.gene35712

ATGTCACTCCCACCACCGATACCACCACCGTCCCTAGCAACTCCACCGAAAGCAAGGCCAACGGAGCTACCGATCCGGCAGATTCCGGGAAGCCACGGATGGCCATTGCTAGGTCCCTTATCAGACAGGTTAGATTATTTCTGGTTCCAGAAGCCAGAAAACTTTTTCAGAACACGAATGGACAAGTACAAGAGTACTGTATTCCGTACCAATGTTCCACCCACGTTCCCTTTCTTCACCAACGTGAATCCTAATATTATTGCAGTTCTTGATTGTAAGTCTTTCTCTCACCTCTTTGATATGGACCTTGTTGACAAAAGAGATGTTCTAGTTGGAGATTTTGTTCCTAGTGTTGAATTTACGGGAAATATTAGGGTTGGTGTTTATCAAGATGTTTCTGAACCTCAACATGCTAAGGTACCACTATGACACCACCTACTTTCTTATTTCTTTTGATCATGAAATTCATTTTGTCAATTTTGTTTCTTAGTTATGAACTTTCTGACTCAGTGGTGTGATAATTTGATAACAATAAACAAATCCATGAATGTATGAAACTGCAAAAATTTCCATAAATTTTCCTTGTCATTTTGTTGTTCAAATGTATCTTTAGTTTGTCGGTTTAATCATTAAATGTGTTTTTTGTTTGTCAATTTAGACCATACAATTACTAACAAAAGAAATATTGTTCATGTGTTTGCAATTTTGATAAATTTTAAAGATTATAATGACATCTTACATATTTAAGGATCAAAATTGTTGTTTGCTCTGTTTTAATGTCACATTTTCAAATTCACAACTAATCATATGAATGTTTTCAATGATAGGATAGTTATGATTAATTGGAAGTGTAAAATATCTTTACTATACAAATTAAATTAATAAAATTAATTAATAAGTCTATGATTTTTATTAGGAAAATTATGTCGAAGGATTATGAAATATTAATCTGCATGGGTATCAAAAAAACATTATGTACGGGACTGAGACAAATTGTAAAAAAAGGTAAATAATCATTTTTGTCTTCGAATGTGAAACTAATCACAATAATTCTGTAATGTATCGAAATTTCAAAATAGTATTTGATTACGCGTTTTTTTAGTCCATGCAGTTGAAATAATATCTCAGTGCTAACAATAACTATTTTTTTTTATAAGGATTGATATGACAATATATAAGTATTTATATGAACAGATATGACAATATATAAATACTTATATGAACAGATATGACACTGAGTAAATATAGAGAGACCGATATGCCACTATTAACATATCATTTTAATGTTAGAATTATTTTAACTATCTTAGTGCATAATCAATGATTATTGTAAAATTTCGATATATTAAAGAACTATTGTGACTATTTATTATAAATTCAAGGACGAAAAATGATTATTTACAAAAAAAATAATAATTGTAAAAGAAGACAAAATATACGTAAAGATATTTTTGTTATCGTATGGACTAGGATGGTGGGAAGTCGTTTTCAACTTTTTACTTTACTTGATTTATTATTTAAGGTTTTCAACTTTTTTTTTCCGACAAAATTTAAGGTTTTCTAGTTAAAAAATTTAACGGTAGGACCAGATATAGTGACAACTTACACTAGACGCTCAAGGACATATCATTATTTATTGTACTTTTTTCGGTTTAGCATTATCTATATATTTTTATCATGTTGAGTTTTATTTTGTGTTACGTTAATAATTATTGAGTTTAATGTTATATTTTGACAAAAATTGGTTTTAATGTTTAATTTACGTTGTTTATTTTCAAATTTTAGTGATGGGGAAGTTTTACCATATACCCCTACAAATTATTTTAAAATCCAATTTTACCATTTTTGTCAATTGACTTCACACCCCCACAGAATACATTTTCTGTGCCAAAAGTTTCCTGGTATTTGTGAATAAATCTCTTGATAACTTGCAGATTGTATTGTGCAACACACATCCTCTGTTCAACTCCCCAATTATCTCCCATGCCTGTAACTATGTTGGTACAAATTCACAGCTTTGATAATCCATTAATTACAACGCCTTGGTTCTTTCATAAATTAAATTAAATGGTATTGCTTGCACATGATAATAGTAATTTGATGAAACCAAACAAAAATTTTATTGAAATAAAAAATTGAAAACAGCTTTGTAGAATAAAGAGGAATCATAGATCAATTTCATTTTGGGGATATTTATTTTGTAAACCATTATTCTTTCCCGTATTGTAATGTAAAAACATTCGTAGATGCAAAATTGAAGGAATGATTAATAAGTAAACTAAAGGTTATGTGTTGAAATCATAGAAGAAAAACAAGAAGAATCAGAAAAATTGAAATGGTGAAGGAGAAGGAAGAGAGATGGAATCAGTTTTGTGGGGGTGAAATCCAATGATATAAAGGGTAAAATTGAGATTTTCTTCTTACTTGTAGGGGTGAAAGTATAAGTGTATGGGTATATGGTATAATTTCCTAGTGATGGCCACAAACAAGCAAAATATCCCATTGTTTCAAGGCTTGTATTTAGCCCAGCCTAGATTATGGTGGTGTGTTTTGTCCCGTATTATTTGAAATCTCTCGACTTTGGTATATTTTTGGGACCATGACAATTGATAGAAAGATTTTTTTGGCTACCACACATTTGTCTTTCCATCCTCACAACTTTTCAATTTTTTTTTCTTTAAAAATATTATTTTTGGTCTTTTTACACAACAATTTTCTTTTCAAAAACTTTATTTGCGAGTTTAAAGGGGAGGAGAGGACTTTTAGTAAAAGGAAGGAGTAAAGGAAAATGGAAGAAACGATAGTCCCCTAACTTGAGTATGAGTTGACATAAAAACTCTAGGGTCCGTTTGGTTTTCGGAAACATTTTTTTTGTTTTCATTTCATATTCTCTTTTCAAATTTCAAGAGTTAGAAAACGTTTGTTTTAATTTCTCATTTTCAAGAAATGAAAATATCGATAACGTGCTTGGTTTGACCAATTTTAATTACCAGTTCATAAAATATTGCATAATATTCAGAGGCCTAATCCACAATAGAAATACAGTCATATAAATAGATTCATCAAACAACAATTAGCATTCATTTTGATCACGTAGTATACTTCATGCAGGCAAAGAATTTCTCCATGAACATTTTGAAGCAAAGTTCAAGCATATGGGTACCAGAACTGATATCAAACCTGGACATATTTTTGGACCAAATTGAAGCAACACTGTCTAATTCTTCATCAGCAAGTTACTTCTCCCCACTGCAGAAATTTCTGTTCACGTTCCTAAGCAAAGTACTTGCCAGAGCCGATCCTTCCCTTGATCCCAAAATCGCCGAATCAGGCTCCTCCATGCTCAACAAATGGCTCGCAGTTCAGCTTCTACCGACTGTGAGTGTCGGCACCATCCAACCACTCGAAGAAATTTTCCTCCATTCCTTCTCTTACCCTTATGCTCTTGTCAGTGGAGACTACAAAAACCTCTACAACTTCATTAAACAACATGGTAACACTCTGTTTATTTAAAGTATAGTTTTTGTTAAAATTCTTAGAACATCATACTTAGTATATAAATTCTCTCTTTTTCATAAAAAAATACTCAAGATTATATAATTTCAATGCATCATGCCCCAGCAAATAATGATGTGAAAAAGAAAACATTTGCTTAATTTATTTGATGTGTAATAAACAATATTGATAACAGGTAAGGAAGTGATAAAAAGTGGAACGGAGTTCGGGTTGAGTGAAGATGAAGCAATCCACAACTTGCTTTTTGTGTTGGGTTTCAACTCATATGGTGGGTTTTCAATTTTCCTTCCAAAATTGATTGAGAGCATAACGAACGGTCCAACCGGTTTGCAAGAGAAGTTGAGAAAGGAAGCAAGAGAGAAAGGCGGTTCAACTCTTGGGTTTGACTCGTTAAAAGAGTTGGAACTAATAAATTCGGTGGTTTATGAAACCCTGCGAATGAACCCACCGGTTCCACTTCAATTTGGTCGAGCCAGAAAAGATTTTCAACTCAGTTCATATGACTCCGCGTTCAATGTGAAGAAGGGTGAGTTATTATGTGGGTTTCAGAAGCTTGTAATGAGGGACCCGGTCGTGTTTGATGAACCAGAACAATTTAAACCGGAACGGTTCACTAAAGAGAAAGGAGCCGAGTTATTGAACTATTTGTATTGGTCTAATGGGCCACAAACTGGTTCGCCAACTGTGTCCAATAAACAGTGTGCAGGTAAGGACATCGTGACCTTCACCGCTGCGTTGATTGTGGCACACTTGTTACGTCGGTATGATTTAATTAAAGGGGATGGTAGTTCCATTACTGCCTTACAGAAGGCCAAATGA
Protein sequence

>MS.gene35712.t1

MSLPPPIPPPSLATPPKARPTELPIRQIPGSHGWPLLGPLSDRLDYFWFQKPENFFRTRMDKYKSTVFRTNVPPTFPFFTNVNPNIIAVLDCKSFSHLFDMDLVDKRDVLVGDFVPSVEFTGNIRVGVYQDVSEPQHAKAKNFSMNILKQSSSIWVPELISNLDIFLDQIEATLSNSSSASYFSPLQKFLFTFLSKVLARADPSLDPKIAESGSSMLNKWLAVQLLPTVSVGTIQPLEEIFLHSFSYPYALVSGDYKNLYNFIKQHGKEVIKSGTEFGLSEDEAIHNLLFVLGFNSYGGFSIFLPKLIESITNGPTGLQEKLRKEAREKGGSTLGFDSLKELELINSVVYETLRMNPPVPLQFGRARKDFQLSSYDSAFNVKKGELLCGFQKLVMRDPVVFDEPEQFKPERFTKEKGAELLNYLYWSNGPQTGSPTVSNKQCAGKDIVTFTAALIVAHLLRRYDLIKGDGSSITALQKAK