Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33624.t1 | XP_013466466.1 | 98.8 | 171 | 2 | 0 | 6 | 176 | 28 | 198 | 2.10E-66 | 261.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33624.t1 | Q5M990 | 39.8 | 83 | 50 | 0 | 28 | 110 | 53 | 135 | 1.5e-09 | 64.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33624.t1 | A0A072VFD8 | 98.8 | 171 | 2 | 0 | 6 | 176 | 28 | 198 | 1.5e-66 | 261.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene33624 | 0.820557 | 6.44E-53 | -1.69E-46 |
| MS.gene049254 | MS.gene33624 | 0.835457 | 1.66E-56 | -1.69E-46 |
| MS.gene049272 | MS.gene33624 | 0.83852 | 2.74E-57 | -1.69E-46 |
| MS.gene049404 | MS.gene33624 | 0.848492 | 5.92E-60 | -1.69E-46 |
| MS.gene049435 | MS.gene33624 | 0.821311 | 4.32E-53 | -1.69E-46 |
| MS.gene049501 | MS.gene33624 | 0.825479 | 4.58E-54 | -1.69E-46 |
| MS.gene049669 | MS.gene33624 | 0.806281 | 8.88E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene33624 | 0.803476 | 3.42E-49 | -1.69E-46 |
| MS.gene049825 | MS.gene33624 | 0.804672 | 1.93E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene33624 | 0.819692 | 1.02E-52 | -1.69E-46 |
| MS.gene049873 | MS.gene33624 | 0.820188 | 7.83E-53 | -1.69E-46 |
| MS.gene050026 | MS.gene33624 | 0.823734 | 1.18E-53 | -1.69E-46 |
| MS.gene050156 | MS.gene33624 | 0.824365 | 8.40E-54 | -1.69E-46 |
| MS.gene050355 | MS.gene33624 | 0.818139 | 2.29E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene33624 | 0.816093 | 6.61E-52 | -1.69E-46 |
| MS.gene050559 | MS.gene33624 | 0.845183 | 4.76E-59 | -1.69E-46 |
| MS.gene050561 | MS.gene33624 | 0.845745 | 3.35E-59 | -1.69E-46 |
| MS.gene050562 | MS.gene33624 | 0.83448 | 2.92E-56 | -1.69E-46 |
| MS.gene050807 | MS.gene33624 | 0.804747 | 1.86E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene33624 | 0.813415 | 2.59E-51 | -1.69E-46 |
| MS.gene051147 | MS.gene33624 | 0.809481 | 1.85E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene33624 | 0.801028 | 1.09E-48 | -1.69E-46 |
| MS.gene051247 | MS.gene33624 | 0.806581 | 7.67E-50 | -1.69E-46 |
| MS.gene05125 | MS.gene33624 | 0.809477 | 1.86E-50 | -1.69E-46 |
| MS.gene051265 | MS.gene33624 | 0.815927 | 7.19E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene33624 | 0.826195 | 3.10E-54 | -1.69E-46 |
| MS.gene051574 | MS.gene33624 | 0.80524 | 1.47E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene33624 | 0.810066 | 1.39E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene33624 | 0.826199 | 3.09E-54 | -1.69E-46 |
| MS.gene051957 | MS.gene33624 | 0.81653 | 5.27E-52 | -1.69E-46 |
| MS.gene052190 | MS.gene33624 | 0.81758 | 3.06E-52 | -1.69E-46 |
| MS.gene052333 | MS.gene33624 | 0.82228 | 2.58E-53 | -1.69E-46 |
| MS.gene052384 | MS.gene33624 | 0.825834 | 3.78E-54 | -1.69E-46 |
| MS.gene052519 | MS.gene33624 | 0.82581 | 3.83E-54 | -1.69E-46 |
| MS.gene052582 | MS.gene33624 | 0.826962 | 2.03E-54 | -1.69E-46 |
| MS.gene052584 | MS.gene33624 | 0.819925 | 8.99E-53 | -1.69E-46 |
| MS.gene052586 | MS.gene33624 | 0.807792 | 4.25E-50 | -1.69E-46 |
| MS.gene052611 | MS.gene33624 | 0.804177 | 2.45E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene33624 | 0.808255 | 3.39E-50 | -1.69E-46 |
| MS.gene052867 | MS.gene33624 | 0.834652 | 2.65E-56 | -1.69E-46 |
| MS.gene053166 | MS.gene33624 | 0.844574 | 6.95E-59 | -1.69E-46 |
| MS.gene053201 | MS.gene33624 | 0.822463 | 2.34E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene33624 | 0.843496 | 1.35E-58 | -1.69E-46 |
| MS.gene053621 | MS.gene33624 | 0.808066 | 3.72E-50 | -1.69E-46 |
| MS.gene053953 | MS.gene33624 | 0.807769 | 4.30E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene33624 | 0.827225 | 1.76E-54 | -1.69E-46 |
| MS.gene053967 | MS.gene33624 | 0.805601 | 1.23E-49 | -1.69E-46 |
| MS.gene053998 | MS.gene33624 | 0.82135 | 4.23E-53 | -1.69E-46 |
| MS.gene05414 | MS.gene33624 | 0.805086 | 1.58E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene33624 | 0.819231 | 1.29E-52 | -1.69E-46 |
| MS.gene054236 | MS.gene33624 | 0.827443 | 1.56E-54 | -1.69E-46 |
| MS.gene054467 | MS.gene33624 | 0.80304 | 4.21E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene33624 | 0.807238 | 5.57E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene33624 | 0.814718 | 1.34E-51 | -1.69E-46 |
| MS.gene05447 | MS.gene33624 | 0.801537 | 8.59E-49 | -1.69E-46 |
| MS.gene054559 | MS.gene33624 | 0.815467 | 9.11E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene33624 | 0.846035 | 2.80E-59 | -1.69E-46 |
| MS.gene054775 | MS.gene33624 | 0.802178 | 6.35E-49 | -1.69E-46 |
| MS.gene055166 | MS.gene33624 | 0.814981 | 1.17E-51 | -1.69E-46 |
| MS.gene055227 | MS.gene33624 | 0.805118 | 1.56E-49 | -1.69E-46 |
| MS.gene055228 | MS.gene33624 | 0.804204 | 2.42E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene33624 | 0.811911 | 5.52E-51 | -1.69E-46 |
| MS.gene055357 | MS.gene33624 | 0.817051 | 4.03E-52 | -1.69E-46 |
| MS.gene055464 | MS.gene33624 | 0.829294 | 5.58E-55 | -1.69E-46 |
| MS.gene055586 | MS.gene33624 | 0.814003 | 1.92E-51 | -1.69E-46 |
| MS.gene055589 | MS.gene33624 | 0.811719 | 6.08E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene33624 | 0.805221 | 1.48E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene33624 | 0.842167 | 3.05E-58 | -1.69E-46 |
| MS.gene055875 | MS.gene33624 | 0.807091 | 5.99E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene33624 | 0.822721 | 2.04E-53 | -1.69E-46 |
| MS.gene056050 | MS.gene33624 | 0.830575 | 2.72E-55 | -1.69E-46 |
| MS.gene056162 | MS.gene33624 | 0.83768 | 4.51E-57 | -1.69E-46 |
| MS.gene056173 | MS.gene33624 | 0.806612 | 7.56E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene33624 | 0.803555 | 3.30E-49 | -1.69E-46 |
| MS.gene056252 | MS.gene33624 | 0.829596 | 4.71E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene33624 | 0.84658 | 1.99E-59 | -1.69E-46 |
| MS.gene056506 | MS.gene33624 | 0.817838 | 2.68E-52 | -1.69E-46 |
| MS.gene056595 | MS.gene33624 | 0.812631 | 3.85E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene33624 | 0.826017 | 3.42E-54 | -1.69E-46 |
| MS.gene057021 | MS.gene33624 | 0.805409 | 1.35E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene33624 | 0.819981 | 8.73E-53 | -1.69E-46 |
| MS.gene057060 | MS.gene33624 | 0.815169 | 1.06E-51 | -1.69E-46 |
| MS.gene057314 | MS.gene33624 | 0.800548 | 1.37E-48 | -1.69E-46 |
| MS.gene057414 | MS.gene33624 | 0.814111 | 1.82E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene33624 | 0.825408 | 4.76E-54 | -1.69E-46 |
| MS.gene057693 | MS.gene33624 | 0.814243 | 1.70E-51 | -1.69E-46 |
| MS.gene057755 | MS.gene33624 | 0.810464 | 1.14E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene33624 | 0.818789 | 1.63E-52 | -1.69E-46 |
| MS.gene058009 | MS.gene33624 | 0.815716 | 8.02E-52 | -1.69E-46 |
| MS.gene058010 | MS.gene33624 | 0.834868 | 2.34E-56 | -1.69E-46 |
| MS.gene058037 | MS.gene33624 | 0.845939 | 2.97E-59 | -1.69E-46 |
| MS.gene058548 | MS.gene33624 | 0.802505 | 5.44E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene33624 | 0.846199 | 2.52E-59 | -1.69E-46 |
| MS.gene058829 | MS.gene33624 | 0.831595 | 1.53E-55 | -1.69E-46 |
| MS.gene058979 | MS.gene33624 | 0.833959 | 3.95E-56 | -1.69E-46 |
| MS.gene059015 | MS.gene33624 | 0.81534 | 9.72E-52 | -1.69E-46 |
| MS.gene059272 | MS.gene33624 | 0.846402 | 2.22E-59 | -1.69E-46 |
| MS.gene059317 | MS.gene33624 | 0.808226 | 3.44E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene33624 | 0.81491 | 1.21E-51 | -1.69E-46 |
| MS.gene059550 | MS.gene33624 | 0.803604 | 3.22E-49 | -1.69E-46 |
| MS.gene059584 | MS.gene33624 | 0.816094 | 6.60E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene33624 | 0.815531 | 8.81E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene33624 | 0.802146 | 6.44E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene33624 | 0.832471 | 9.28E-56 | -1.69E-46 |
| MS.gene060167 | MS.gene33624 | 0.837263 | 5.76E-57 | -1.69E-46 |
| MS.gene060310 | MS.gene33624 | 0.803168 | 3.97E-49 | -1.69E-46 |
| MS.gene060312 | MS.gene33624 | 0.815878 | 7.38E-52 | -1.69E-46 |
| MS.gene060322 | MS.gene33624 | 0.827407 | 1.59E-54 | -1.69E-46 |
| MS.gene060521 | MS.gene33624 | 0.819495 | 1.13E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene33624 | 0.812647 | 3.82E-51 | -1.69E-46 |
| MS.gene060572 | MS.gene33624 | 0.815328 | 9.78E-52 | -1.69E-46 |
| MS.gene060781 | MS.gene33624 | 0.827418 | 1.58E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33624.t1 | MTR_1g029720 | 96.571 | 175 | 6 | 0 | 2 | 176 | 24 | 198 | 2.01e-123 | 346 |
| MS.gene33624.t1 | MTR_7g059150 | 27.941 | 136 | 90 | 2 | 6 | 133 | 66 | 201 | 2.37e-13 | 66.6 |
| MS.gene33624.t1 | MTR_2g090135 | 28.244 | 131 | 86 | 2 | 16 | 138 | 79 | 209 | 2.86e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33624.t1 | AT1G77230 | 60.241 | 166 | 64 | 1 | 10 | 173 | 49 | 214 | 1.01e-62 | 193 |
Find 31 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATGCTTGGAATGCTTTAA+AGG | 0.240159 | 1.1:+15384653 | MS.gene33624:CDS |
| ATAGAGAAGCATTGGGTAAA+TGG | 0.246957 | 1.1:+15384556 | MS.gene33624:CDS |
| GGCAGAGCGCAGCTGAATTA+TGG | 0.300886 | 1.1:+15386133 | MS.gene33624:CDS |
| TCTTGTGCTTCTTCATAATC+AGG | 0.336113 | 1.1:-15386393 | None:intergenic |
| CTCCGATTTCTAGTAAAACT+TGG | 0.346366 | 1.1:-15384632 | None:intergenic |
| AAGCTTTCGATAGCATTATC+TGG | 0.386488 | 1.1:-15386160 | None:intergenic |
| TAGAGAAGCATTGGGTAAAT+GGG | 0.391319 | 1.1:+15384557 | MS.gene33624:CDS |
| GGGGAAGTATAGAGAAGCAT+TGG | 0.393951 | 1.1:+15384548 | MS.gene33624:CDS |
| GCCTTCTGTTCATGCAAAGC+TGG | 0.438897 | 1.1:-15384609 | None:intergenic |
| AGAAAGCAACTTCACTCATC+AGG | 0.449250 | 1.1:+15386450 | MS.gene33624:CDS |
| TTGCAGGCTTGGGTCACACT+TGG | 0.449401 | 1.1:+15386112 | MS.gene33624:intron |
| TCATGCAAAGCTGGAACATC+AGG | 0.451462 | 1.1:-15384600 | None:intergenic |
| TTGTGATGATTGTTCAGAAT+CGG | 0.465839 | 1.1:-15382032 | None:intergenic |
| TACTAGAAATCGGAGATGCT+TGG | 0.470911 | 1.1:+15384640 | MS.gene33624:CDS |
| TGACAGAGCTTTAGCTCTCA+AGG | 0.493209 | 1.1:+15386183 | MS.gene33624:CDS |
| ATTCAAAATCGTTATACTGT+AGG | 0.507862 | 1.1:+15386483 | MS.gene33624:CDS |
| ATGGGAAGCTGCTCTTACAT+TGG | 0.523234 | 1.1:+15384575 | MS.gene33624:CDS |
| ACTCAACATGATTCTTCTGA+TGG | 0.523720 | 1.1:+15381992 | MS.gene33624:CDS |
| TCCGATTTCTAGTAAAACTT+GGG | 0.543228 | 1.1:-15384631 | None:intergenic |
| CTTCTTTATTAGACGTGATG+CGG | 0.549938 | 1.1:-15386427 | None:intergenic |
| TCCAGCTTTGCATGAACAGA+AGG | 0.555181 | 1.1:+15384608 | MS.gene33624:CDS |
| GCTACGCAGTTTCAAACTCA+AGG | 0.556440 | 1.1:+15382058 | MS.gene33624:CDS |
| GGGAAGTATAGAGAAGCATT+GGG | 0.566713 | 1.1:+15384549 | MS.gene33624:CDS |
| TCAAGGAGACAACCTTGCTA+TGG | 0.579084 | 1.1:+15382075 | MS.gene33624:CDS |
| TTCAGAATCGGTAGAACGAA+CGG | 0.582267 | 1.1:-15382020 | None:intergenic |
| ATTGAAACCATCGTGGGCTG+AGG | 0.582367 | 1.1:+15385048 | MS.gene33624:CDS |
| ATAAGAATGAAAGCTCATGA+AGG | 0.628762 | 1.1:+15386508 | MS.gene33624:CDS |
| AACAGAAGAATACCATAGCA+AGG | 0.632891 | 1.1:-15382087 | None:intergenic |
| TACTGAATTGAAACCATCGT+GGG | 0.637358 | 1.1:+15385042 | MS.gene33624:CDS |
| TGTCGTACCTCAGCCCACGA+TGG | 0.706434 | 1.1:-15385055 | None:intergenic |
| CTACTGAATTGAAACCATCG+TGG | 0.728758 | 1.1:+15385041 | MS.gene33624:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAGAAATTAAAAAAT+GGG | + | chr1.1:15384266-15384285 | MS.gene33624:intron | 10.0% |
| !! | TTAAATGAATAATCAAATTA+AGG | - | chr1.1:15381352-15381371 | None:intergenic | 10.0% |
| !!! | AAAGTTGATTTTATTTATAT+GGG | + | chr1.1:15383729-15383748 | MS.gene33624:intron | 10.0% |
| !!! | AAGGTTTTAAAAATATAAAT+AGG | - | chr1.1:15383929-15383948 | None:intergenic | 10.0% |
| !!! | AGGTTTTAAAAATATAAATA+GGG | - | chr1.1:15383928-15383947 | None:intergenic | 10.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr1.1:15385694-15385713 | MS.gene33624:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr1.1:15385695-15385714 | None:intergenic | 15.0% |
| !! | ACATATATAATTGAAAACTT+CGG | - | chr1.1:15384422-15384441 | None:intergenic | 15.0% |
| !! | ACTGATTATATAGTTTATAT+AGG | - | chr1.1:15384865-15384884 | None:intergenic | 15.0% |
| !! | ATACTTAAAAAAGGTTAATT+TGG | + | chr1.1:15385570-15385589 | MS.gene33624:intron | 15.0% |
| !! | ATTAAAACTAATTGAGAAAA+TGG | - | chr1.1:15385163-15385182 | None:intergenic | 15.0% |
| !! | CTAATAATACTAATTTAAGT+CGG | - | chr1.1:15384214-15384233 | None:intergenic | 15.0% |
| !! | GAAGAAAAGAAATTAAAAAA+TGG | + | chr1.1:15384265-15384284 | MS.gene33624:intron | 15.0% |
| !! | GAATGAAATTCAATAAATAA+GGG | - | chr1.1:15381222-15381241 | None:intergenic | 15.0% |
| !! | TGAATGAAATTCAATAAATA+AGG | - | chr1.1:15381223-15381242 | None:intergenic | 15.0% |
| !! | TTTAAAAATATAAATAGGGT+CGG | - | chr1.1:15383924-15383943 | None:intergenic | 15.0% |
| !! | TTTCGTATAAATTATAAACT+AGG | - | chr1.1:15382175-15382194 | None:intergenic | 15.0% |
| !!! | AAATCATCATTTTTTTTTCA+AGG | + | chr1.1:15380882-15380901 | MS.gene33624:intron | 15.0% |
| !!! | AAATTTATACAACTACTTTT+TGG | + | chr1.1:15386362-15386381 | MS.gene33624:intron | 15.0% |
| !!! | AACGAAATATTTTAATATCA+AGG | + | chr1.1:15381654-15381673 | MS.gene33624:intron | 15.0% |
| !!! | AATTAACCTTTTTTAAGTAT+TGG | - | chr1.1:15385570-15385589 | None:intergenic | 15.0% |
| !!! | AGATTATCAAAATTTTGTTT+TGG | + | chr1.1:15381813-15381832 | MS.gene33624:intron | 15.0% |
| !!! | ATTCTTTTTATTGTAGTTAT+TGG | - | chr1.1:15381257-15381276 | None:intergenic | 15.0% |
| !!! | CAAAGTTGATTTTATTTATA+TGG | + | chr1.1:15383728-15383747 | MS.gene33624:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr1.1:15385718-15385737 | MS.gene33624:intron | 15.0% |
| !!! | TATTTAGATAAGTGAAATTT+TGG | + | chr1.1:15383108-15383127 | MS.gene33624:intron | 15.0% |
| !!! | TTTATGTTTTTGTTTTTGTT+GGG | + | chr1.1:15382117-15382136 | MS.gene33624:intron | 15.0% |
| !!! | TTTTATGTTTTTGTTTTTGT+TGG | + | chr1.1:15382116-15382135 | MS.gene33624:intron | 15.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr1.1:15385704-15385723 | None:intergenic | 20.0% |
| !! | ACTTATTTGAACTTATCTAT+TGG | - | chr1.1:15382562-15382581 | None:intergenic | 20.0% |
| !! | ATAAAACTATAGCTTAGTTA+TGG | + | chr1.1:15385184-15385203 | MS.gene33624:intron | 20.0% |
| !! | CATATATAATTGAAAACTTC+GGG | - | chr1.1:15384421-15384440 | None:intergenic | 20.0% |
| !! | GATCTATGAAAATAAAATGA+AGG | - | chr1.1:15383169-15383188 | None:intergenic | 20.0% |
| !! | GCAAATTTGACAATTATTAT+GGG | - | chr1.1:15385386-15385405 | None:intergenic | 20.0% |
| !! | GTCTTTCATTAATATTCTAT+TGG | - | chr1.1:15380953-15380972 | None:intergenic | 20.0% |
| !! | TCATTAATATTCTATTGGAT+AGG | - | chr1.1:15380948-15380967 | None:intergenic | 20.0% |
| !! | TGAAATTGATCATATATTCA+TGG | + | chr1.1:15380999-15381018 | MS.gene33624:intron | 20.0% |
| !! | TGCAAATTTGACAATTATTA+TGG | - | chr1.1:15385387-15385406 | None:intergenic | 20.0% |
| !! | TTAAAAATATAAATAGGGTC+GGG | - | chr1.1:15383923-15383942 | None:intergenic | 20.0% |
| !! | TTCTCTTAAAAGATTAAAAC+AGG | - | chr1.1:15384292-15384311 | None:intergenic | 20.0% |
| !!! | AATTGAAATTTTGTTCCTTA+AGG | + | chr1.1:15383306-15383325 | MS.gene33624:intron | 20.0% |
| !!! | ACAATAACTCTTTTGATATA+AGG | + | chr1.1:15381582-15381601 | MS.gene33624:intron | 20.0% |
| !!! | ATGTGAATAAATTTTACAGA+GGG | - | chr1.1:15385097-15385116 | None:intergenic | 20.0% |
| !!! | ATTCTTAGTAGTTTTTTACT+TGG | + | chr1.1:15384984-15385003 | MS.gene33624:intron | 20.0% |
| !!! | CACATGGTATTTTAATTAAA+TGG | - | chr1.1:15385482-15385501 | None:intergenic | 20.0% |
| !!! | GTTATAAGAGAATTATTTTG+AGG | - | chr1.1:15381124-15381143 | None:intergenic | 20.0% |
| !!! | TAGTATTATTAGCTCTAATA+TGG | + | chr1.1:15384222-15384241 | MS.gene33624:intron | 20.0% |
| !!! | TTAATCTAAAACCAAATGTT+GGG | - | chr1.1:15383232-15383251 | None:intergenic | 20.0% |
| !!! | TTAATTCTAAAAAGAAAAGC+AGG | + | chr1.1:15384314-15384333 | MS.gene33624:intron | 20.0% |
| !!! | TTGATATTTTGATACATTGA+AGG | - | chr1.1:15381494-15381513 | None:intergenic | 20.0% |
| ! | AAAATATAGAGATCATGATG+CGG | - | chr1.1:15385304-15385323 | None:intergenic | 25.0% |
| ! | AAAGTGGAAAATATTGAGTT+AGG | - | chr1.1:15385516-15385535 | None:intergenic | 25.0% |
| ! | AAGAGGTTATTTAAGCTTTA+GGG | - | chr1.1:15381555-15381574 | None:intergenic | 25.0% |
| ! | AAGATTATACACATACATAG+AGG | - | chr1.1:15385134-15385153 | None:intergenic | 25.0% |
| ! | AATAGTGTTTGTGCTTTATA+TGG | - | chr1.1:15384104-15384123 | None:intergenic | 25.0% |
| ! | AATGATTAAGAGAAAGAGAT+TGG | + | chr1.1:15385661-15385680 | MS.gene33624:intron | 25.0% |
| ! | ACAATAAGTAAGTACGTATA+AGG | + | chr1.1:15381614-15381633 | MS.gene33624:intron | 25.0% |
| ! | ACTTGGTATATGATAATTGA+CGG | + | chr1.1:15385001-15385020 | MS.gene33624:intron | 25.0% |
| ! | AGAAAAGGTTATTATTGCAT+TGG | + | chr1.1:15385781-15385800 | MS.gene33624:intron | 25.0% |
| ! | AGTACACCAATACTTAAAAA+AGG | + | chr1.1:15385561-15385580 | MS.gene33624:intron | 25.0% |
| ! | ATAACTGCTCTAGTATTATT+TGG | - | chr1.1:15386043-15386062 | None:intergenic | 25.0% |
| ! | ATTACCCCATAATTAATCTA+CGG | - | chr1.1:15381428-15381447 | None:intergenic | 25.0% |
| ! | ATTCAAAATCGTTATACTGT+AGG | + | chr1.1:15386483-15386502 | MS.gene33624:CDS | 25.0% |
| ! | ATTTCAATATTAATCCTTGC+AGG | + | chr1.1:15386096-15386115 | MS.gene33624:intron | 25.0% |
| ! | ATTTGACAATTATTATGGGA+CGG | - | chr1.1:15385382-15385401 | None:intergenic | 25.0% |
| ! | CATGATAAGTTACCTTATAA+AGG | - | chr1.1:15383791-15383810 | None:intergenic | 25.0% |
| ! | GTGATATTGTGCATATAATT+GGG | + | chr1.1:15385275-15385294 | MS.gene33624:intron | 25.0% |
| ! | GTTATATGATTGTAGTGATA+TGG | - | chr1.1:15383479-15383498 | None:intergenic | 25.0% |
| ! | TAAGAGGTTATTTAAGCTTT+AGG | - | chr1.1:15381556-15381575 | None:intergenic | 25.0% |
| ! | TAGAATTCGAATAATGTCAA+TGG | - | chr1.1:15386260-15386279 | None:intergenic | 25.0% |
| ! | TGTGATATTGTGCATATAAT+TGG | + | chr1.1:15385274-15385293 | MS.gene33624:intron | 25.0% |
| ! | TTCTTAAACTTCATTGAGAA+AGG | + | chr1.1:15385236-15385255 | MS.gene33624:intron | 25.0% |
| ! | TTGTTCCACAAGATAATTAA+GGG | - | chr1.1:15381788-15381807 | None:intergenic | 25.0% |
| ! | TTTATATGTGCAATGTACTA+TGG | - | chr1.1:15382889-15382908 | None:intergenic | 25.0% |
| ! | TTTGTTCCACAAGATAATTA+AGG | - | chr1.1:15381789-15381808 | None:intergenic | 25.0% |
| !! | AATCAGACTTTATTTGTTTG+GGG | + | chr1.1:15384930-15384949 | MS.gene33624:intron | 25.0% |
| !! | AGTTGTGATGAACTTAATTT+TGG | + | chr1.1:15384882-15384901 | MS.gene33624:intron | 25.0% |
| !! | ATAAAGCACAAACACTATTT+TGG | + | chr1.1:15384105-15384124 | MS.gene33624:intron | 25.0% |
| !! | CAATCAGACTTTATTTGTTT+GGG | + | chr1.1:15384929-15384948 | MS.gene33624:intron | 25.0% |
| !! | CATACAGGATTTTTAAATAG+GGG | + | chr1.1:15382688-15382707 | MS.gene33624:intron | 25.0% |
| !! | CATGTGAATAAATTTTACAG+AGG | - | chr1.1:15385098-15385117 | None:intergenic | 25.0% |
| !! | GCATACAGGATTTTTAAATA+GGG | + | chr1.1:15382687-15382706 | MS.gene33624:intron | 25.0% |
| !! | GTTAATCTAAAACCAAATGT+TGG | - | chr1.1:15383233-15383252 | None:intergenic | 25.0% |
| !! | TAATCTAAAACCAAATGTTG+GGG | - | chr1.1:15383231-15383250 | None:intergenic | 25.0% |
| !! | TGTGATTAAACTTTTTGCTT+AGG | + | chr1.1:15381837-15381856 | MS.gene33624:intron | 25.0% |
| !!! | AAGTGAAATTTTGGTGTTAA+AGG | + | chr1.1:15383117-15383136 | MS.gene33624:intron | 25.0% |
| !!! | ATAAGAGAATTATTTTGAGG+TGG | - | chr1.1:15381121-15381140 | None:intergenic | 25.0% |
| !!! | ATTCTAGTTCCTAAAATTCA+GGG | + | chr1.1:15383434-15383453 | MS.gene33624:intron | 25.0% |
| !!! | GATTATTTTGACTAACAAAG+TGG | - | chr1.1:15381533-15381552 | None:intergenic | 25.0% |
| !!! | TCTATATTTTGACATGCATT+TGG | + | chr1.1:15385314-15385333 | MS.gene33624:intron | 25.0% |
| !!! | TTACAAAAGCTTCTAGAATA+AGG | - | chr1.1:15383501-15383520 | None:intergenic | 25.0% |
| ACAAACTATAGACAAGACAA+AGG | - | chr1.1:15384003-15384022 | None:intergenic | 30.0% | |
| ACAACCGTAGATTAATTATG+GGG | + | chr1.1:15381421-15381440 | MS.gene33624:intron | 30.0% | |
| AGGGTACAATTGAAAAGAAA+AGG | + | chr1.1:15385766-15385785 | MS.gene33624:intron | 30.0% | |
| ATTATAAACTAGGTGACACT+TGG | - | chr1.1:15382165-15382184 | None:intergenic | 30.0% | |
| ATTCGAATAATGTCAATGGT+AGG | - | chr1.1:15386256-15386275 | None:intergenic | 30.0% | |
| ATTGAAATAAATGCTTGCAC+TGG | - | chr1.1:15386084-15386103 | None:intergenic | 30.0% | |
| ATTTCCCCTTAATTATCTTG+TGG | + | chr1.1:15381780-15381799 | MS.gene33624:intron | 30.0% | |
| CACAATATCACAAACACATA+TGG | - | chr1.1:15385266-15385285 | None:intergenic | 30.0% | |
| CACTAGTTAAGACCTTTATA+AGG | + | chr1.1:15383776-15383795 | MS.gene33624:intron | 30.0% | |
| CCAAACAAATAAAGTCTGAT+TGG | - | chr1.1:15384931-15384950 | None:intergenic | 30.0% | |
| CTACAAACTATCAATGACAA+TGG | - | chr1.1:15383360-15383379 | None:intergenic | 30.0% | |
| CTCAAGTCTCAAAAACAAAT+GGG | - | chr1.1:15383605-15383624 | None:intergenic | 30.0% | |
| GACAACCGTAGATTAATTAT+GGG | + | chr1.1:15381420-15381439 | MS.gene33624:intron | 30.0% | |
| GAGTTATTGTGAGTATTAAG+AGG | - | chr1.1:15381572-15381591 | None:intergenic | 30.0% | |
| GCAAACTTAGTTTATCTGTA+AGG | + | chr1.1:15385963-15385982 | MS.gene33624:intron | 30.0% | |
| GTATTATTTGGTATGAACAG+TGG | - | chr1.1:15386031-15386050 | None:intergenic | 30.0% | |
| TCAAATTGAAGTGAAGAAGA+TGG | - | chr1.1:15384375-15384394 | None:intergenic | 30.0% | |
| TCTCAAGTCTCAAAAACAAA+TGG | - | chr1.1:15383606-15383625 | None:intergenic | 30.0% | |
| TGAAAACAGCCTATAAGTAT+AGG | - | chr1.1:15382436-15382455 | None:intergenic | 30.0% | |
| TGACAACCGTAGATTAATTA+TGG | + | chr1.1:15381419-15381438 | MS.gene33624:intron | 30.0% | |
| TGATCATTCGAACAACTATA+AGG | - | chr1.1:15383948-15383967 | None:intergenic | 30.0% | |
| TGTTCCACAAGATAATTAAG+GGG | - | chr1.1:15381787-15381806 | None:intergenic | 30.0% | |
| TTAGGACTGTAAATGAAAAG+TGG | - | chr1.1:15385532-15385551 | None:intergenic | 30.0% | |
| TTATTTCAAACCCCAACATT+TGG | + | chr1.1:15383218-15383237 | MS.gene33624:intron | 30.0% | |
| TTGAAATAAATGCTTGCACT+GGG | - | chr1.1:15386083-15386102 | None:intergenic | 30.0% | |
| TTGTGATGATTGTTCAGAAT+CGG | - | chr1.1:15382035-15382054 | None:intergenic | 30.0% | |
| TTTCTTCCTGTTAAATGTTG+TGG | - | chr1.1:15384252-15384271 | None:intergenic | 30.0% | |
| ! | AGAATATTCCCCTGAATTTT+AGG | - | chr1.1:15383446-15383465 | None:intergenic | 30.0% |
| ! | ATATTGCTACAGCGTTTTAA+GGG | - | chr1.1:15382656-15382675 | None:intergenic | 30.0% |
| ! | CCAATCAGACTTTATTTGTT+TGG | + | chr1.1:15384928-15384947 | MS.gene33624:intron | 30.0% |
| ! | GAAATTTTGTTCCTTAAGGA+AGG | + | chr1.1:15383310-15383329 | MS.gene33624:intron | 30.0% |
| ! | GGCATACAGGATTTTTAAAT+AGG | + | chr1.1:15382686-15382705 | MS.gene33624:intron | 30.0% |
| ! | TATATTGCTACAGCGTTTTA+AGG | - | chr1.1:15382657-15382676 | None:intergenic | 30.0% |
| ! | TTGTAATCTTCCATCCATTT+TGG | + | chr1.1:15383515-15383534 | MS.gene33624:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr1.1:15385612-15385631 | None:intergenic | 30.0% |
| !! | CATTCTAGTTCCTAAAATTC+AGG | + | chr1.1:15383433-15383452 | MS.gene33624:intron | 30.0% |
| !! | GATGAACTTAATTTTGGCAA+TGG | + | chr1.1:15384888-15384907 | MS.gene33624:intron | 30.0% |
| !! | TCCGATTTCTAGTAAAACTT+GGG | - | chr1.1:15384634-15384653 | None:intergenic | 30.0% |
| !! | TTCTAGTTCCTAAAATTCAG+GGG | + | chr1.1:15383435-15383454 | MS.gene33624:intron | 30.0% |
| !!! | CCATGTTACTTTCATTTTCA+CGG | - | chr1.1:15381888-15381907 | None:intergenic | 30.0% |
| !!! | GGTTTTAGATTAACTTCTGT+TGG | + | chr1.1:15383239-15383258 | MS.gene33624:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr1.1:15385613-15385632 | MS.gene33624:intron | 30.0% |
| AACAAGTGTGCCAATTATTG+TGG | + | chr1.1:15385923-15385942 | MS.gene33624:intron | 35.0% | |
| AACAGAAGAATACCATAGCA+AGG | - | chr1.1:15382090-15382109 | None:intergenic | 35.0% | |
| AAGCTTTCGATAGCATTATC+TGG | - | chr1.1:15386163-15386182 | None:intergenic | 35.0% | |
| AATACGTGTAATCAGTGCAT+TGG | + | chr1.1:15383813-15383832 | MS.gene33624:intron | 35.0% | |
| AATATTAATCCTTGCAGGCT+TGG | + | chr1.1:15386101-15386120 | MS.gene33624:intron | 35.0% | |
| ACTAACAAAGTGGACAATCA+AGG | - | chr1.1:15381523-15381542 | None:intergenic | 35.0% | |
| ACTCAACATGATTCTTCTGA+TGG | + | chr1.1:15381992-15382011 | MS.gene33624:CDS | 35.0% | |
| AGAATGAAAGCCTGTACTTT+CGG | - | chr1.1:15383419-15383438 | None:intergenic | 35.0% | |
| AGATGCTTGGAATGCTTTAA+AGG | + | chr1.1:15384653-15384672 | MS.gene33624:CDS | 35.0% | |
| AGTCCTTCAATGTATCGAAA+TGG | - | chr1.1:15381720-15381739 | None:intergenic | 35.0% | |
| ATATTAATCCTTGCAGGCTT+GGG | + | chr1.1:15386102-15386121 | MS.gene33624:intron | 35.0% | |
| CACTGATAATTCACAAGCAA+AGG | + | chr1.1:15380837-15380856 | MS.gene33624:intron | 35.0% | |
| CCGTGAAAATGAAAGTAACA+TGG | + | chr1.1:15381885-15381904 | MS.gene33624:intron | 35.0% | |
| CTTCTTTATTAGACGTGATG+CGG | - | chr1.1:15386430-15386449 | None:intergenic | 35.0% | |
| CTTGAACAGATTCATGACAA+TGG | + | chr1.1:15383060-15383079 | MS.gene33624:intron | 35.0% | |
| GCCTATAAGTATAGGTTACA+CGG | - | chr1.1:15382428-15382447 | None:intergenic | 35.0% | |
| GCTTTATATGGCATTACACA+GGG | - | chr1.1:15384092-15384111 | None:intergenic | 35.0% | |
| GGGTTCTTAAAAAAGGTTTG+CGG | - | chr1.1:15382815-15382834 | None:intergenic | 35.0% | |
| TACCAGTTAGAGTTATCATC+AGG | + | chr1.1:15382215-15382234 | MS.gene33624:intron | 35.0% | |
| TACTGAATTGAAACCATCGT+GGG | + | chr1.1:15385042-15385061 | MS.gene33624:CDS | 35.0% | |
| TCCGTGTAACCTATACTTAT+AGG | + | chr1.1:15382424-15382443 | MS.gene33624:intron | 35.0% | |
| TCTTGTGCTTCTTCATAATC+AGG | - | chr1.1:15386396-15386415 | None:intergenic | 35.0% | |
| TGATTACTTGATGCACATTC+AGG | - | chr1.1:15381464-15381483 | None:intergenic | 35.0% | |
| TGCATCAGGGTTCTTAAAAA+AGG | - | chr1.1:15382822-15382841 | None:intergenic | 35.0% | |
| TGCTTTATATGGCATTACAC+AGG | - | chr1.1:15384093-15384112 | None:intergenic | 35.0% | |
| TGTAGCAATATAGCAAGTAG+TGG | + | chr1.1:15382665-15382684 | MS.gene33624:intron | 35.0% | |
| TGTGATAAAGAGGGTAAACA+AGG | - | chr1.1:15381932-15381951 | None:intergenic | 35.0% | |
| TTAAGGGGAAATAGTCACTT+TGG | - | chr1.1:15381772-15381791 | None:intergenic | 35.0% | |
| TTACGACAAAAGTTGACAGA+CGG | - | chr1.1:15386306-15386325 | None:intergenic | 35.0% | |
| TTATGGGGTAATAGTCACTT+TGG | + | chr1.1:15381436-15381455 | MS.gene33624:intron | 35.0% | |
| TTTAAGTCGGAAACATACTG+AGG | - | chr1.1:15384201-15384220 | None:intergenic | 35.0% | |
| ! | AAACATACTGAGGTGTTTGT+TGG | - | chr1.1:15384191-15384210 | None:intergenic | 35.0% |
| ! | GACTTTATTTGTTTGGGGTT+TGG | + | chr1.1:15384935-15384954 | MS.gene33624:intron | 35.0% |
| ! | GAGACCTCTTTAATCCTTTT+GGG | + | chr1.1:15383622-15383641 | MS.gene33624:intron | 35.0% |
| ! | GCCCAAGTTTTACTAGAAAT+CGG | + | chr1.1:15384630-15384649 | MS.gene33624:CDS | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr1.1:15385743-15385762 | MS.gene33624:intron | 35.0% |
| ! | TGAGACCTCTTTAATCCTTT+TGG | + | chr1.1:15383621-15383640 | MS.gene33624:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr1.1:15385747-15385766 | MS.gene33624:intron | 35.0% |
| ! | TTGCCATTTCGATACATTGA+AGG | + | chr1.1:15381714-15381733 | MS.gene33624:intron | 35.0% |
| !! | AAGCGAACTTTTGTTACTTG+AGG | - | chr1.1:15383336-15383355 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr1.1:15385811-15385830 | MS.gene33624:intron | 35.0% |
| !! | ATAGAGAAGCATTGGGTAAA+TGG | + | chr1.1:15384556-15384575 | MS.gene33624:CDS | 35.0% |
| !! | CTCCGATTTCTAGTAAAACT+TGG | - | chr1.1:15384635-15384654 | None:intergenic | 35.0% |
| !! | TAGAGAAGCATTGGGTAAAT+GGG | + | chr1.1:15384557-15384576 | MS.gene33624:CDS | 35.0% |
| !!! | GAGAATTATTTTGAGGTGGA+TGG | - | chr1.1:15381117-15381136 | None:intergenic | 35.0% |
| AAGCAATTGTGACACTGTTC+AGG | - | chr1.1:15382536-15382555 | None:intergenic | 40.0% | |
| AATACCACCATCTTTGTTGC+AGG | + | chr1.1:15384524-15384543 | MS.gene33624:intron | 40.0% | |
| AATGCATACAACAGCATGCA+TGG | - | chr1.1:15383553-15383572 | None:intergenic | 40.0% | |
| ACACAGCATATGACATGACA+TGG | - | chr1.1:15384483-15384502 | None:intergenic | 40.0% | |
| AGAAAGCAACTTCACTCATC+AGG | + | chr1.1:15386450-15386469 | MS.gene33624:CDS | 40.0% | |
| AGCCTGATGATAACTCTAAC+TGG | - | chr1.1:15382220-15382239 | None:intergenic | 40.0% | |
| AGGAAGACTCAACAGGAAAT+GGG | - | chr1.1:15383648-15383667 | None:intergenic | 40.0% | |
| ATACCGCTACACTGAAGTTT+AGG | + | chr1.1:15382841-15382860 | MS.gene33624:intron | 40.0% | |
| ATGCATACAACAGCATGCAT+GGG | - | chr1.1:15383552-15383571 | None:intergenic | 40.0% | |
| CGATAACAATTGCAGTCACA+TGG | + | chr1.1:15382714-15382733 | MS.gene33624:intron | 40.0% | |
| CTACTGAATTGAAACCATCG+TGG | + | chr1.1:15385041-15385060 | MS.gene33624:CDS | 40.0% | |
| GAAAGTGATACGATGCTAAG+AGG | - | chr1.1:15383697-15383716 | None:intergenic | 40.0% | |
| GATGCTAAGAGGTGGTAAAT+GGG | - | chr1.1:15383686-15383705 | None:intergenic | 40.0% | |
| TACCGCTACACTGAAGTTTA+GGG | + | chr1.1:15382842-15382861 | MS.gene33624:intron | 40.0% | |
| TACTAGAAATCGGAGATGCT+TGG | + | chr1.1:15384640-15384659 | MS.gene33624:CDS | 40.0% | |
| TATAGCAAGTAGTGGCATAC+AGG | + | chr1.1:15382673-15382692 | MS.gene33624:intron | 40.0% | |
| TCGGTGAAGTGTGATAAAGA+GGG | - | chr1.1:15381941-15381960 | None:intergenic | 40.0% | |
| TCTTCATGAAGCTTGGCAAT+TGG | + | chr1.1:15386210-15386229 | MS.gene33624:intron | 40.0% | |
| TGCATAGGATTCAAAGAGTG+TGG | - | chr1.1:15382617-15382636 | None:intergenic | 40.0% | |
| TTCAGAATCGGTAGAACGAA+CGG | - | chr1.1:15382023-15382042 | None:intergenic | 40.0% | |
| TTCCCTAAACTTCAGTGTAG+CGG | - | chr1.1:15382847-15382866 | None:intergenic | 40.0% | |
| ! | ACAAGCTTAACCGAAAGTAC+AGG | + | chr1.1:15383406-15383425 | MS.gene33624:intron | 40.0% |
| ! | GCATGCTGTTGTATGCATTT+TGG | + | chr1.1:15383554-15383573 | MS.gene33624:intron | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr1.1:15385746-15385765 | MS.gene33624:intron | 40.0% |
| ! | GTGTGTGAAGATTTGAAGTG+CGG | + | chr1.1:15381039-15381058 | MS.gene33624:intron | 40.0% |
| ! | TACGTGCGTTTTCTGTACTT+TGG | + | chr1.1:15383001-15383020 | MS.gene33624:intron | 40.0% |
| !! | GGGAAGTATAGAGAAGCATT+GGG | + | chr1.1:15384549-15384568 | MS.gene33624:CDS | 40.0% |
| !! | GTCTTCCTGATTCACTTTTC+TGG | + | chr1.1:15383660-15383679 | MS.gene33624:intron | 40.0% |
| !! | TTCGAATTCTAGTTTGCAGC+TGG | + | chr1.1:15386269-15386288 | MS.gene33624:intron | 40.0% |
| !!! | ATGTTGATTTTCCTCCTCTG+TGG | + | chr1.1:15384033-15384052 | MS.gene33624:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr1.1:15385851-15385870 | MS.gene33624:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr1.1:15385870-15385851 | None:intergenic | 40.0% |
| AAATGTTAACCAGTGCCCCT+GGG | + | chr1.1:15383752-15383771 | MS.gene33624:intron | 45.0% | |
| AACACAACCGTGTGATGTCA+AGG | - | chr1.1:15382744-15382763 | None:intergenic | 45.0% | |
| ACACGGTTGTGTTGTGCTTT+CGG | + | chr1.1:15382751-15382770 | MS.gene33624:intron | 45.0% | |
| AGAGTTATCATCAGGCTCGT+TGG | + | chr1.1:15382223-15382242 | MS.gene33624:intron | 45.0% | |
| AGGTCAGTCTTCATGAAGCT+TGG | + | chr1.1:15386203-15386222 | MS.gene33624:intron | 45.0% | |
| AGTGATACGATGCTAAGAGG+TGG | - | chr1.1:15383694-15383713 | None:intergenic | 45.0% | |
| ATGGGAAGCTGCTCTTACAT+TGG | + | chr1.1:15384575-15384594 | MS.gene33624:CDS | 45.0% | |
| ATGGGCCAGAAAAGTGAATC+AGG | - | chr1.1:15383668-15383687 | None:intergenic | 45.0% | |
| CAGGAAGACTCAACAGGAAA+TGG | - | chr1.1:15383649-15383668 | None:intergenic | 45.0% | |
| CAGTGAAGAAGAGAAGAGGT+AGG | + | chr1.1:15381862-15381881 | MS.gene33624:intron | 45.0% | |
| CGATGCTAAGAGGTGGTAAA+TGG | - | chr1.1:15383687-15383706 | None:intergenic | 45.0% | |
| CGTTGTCTTGCTCAAAAGGA+AGG | - | chr1.1:15381964-15381983 | None:intergenic | 45.0% | |
| GAGGAAGATGCCAAAATGGA+TGG | - | chr1.1:15383528-15383547 | None:intergenic | 45.0% | |
| GAGTTATCATCAGGCTCGTT+GGG | + | chr1.1:15382224-15382243 | MS.gene33624:intron | 45.0% | |
| GATAATTGACGGTCTCTGCA+TGG | + | chr1.1:15385012-15385031 | MS.gene33624:intron | 45.0% | |
| GCTACGCAGTTTCAAACTCA+AGG | + | chr1.1:15382058-15382077 | MS.gene33624:CDS | 45.0% | |
| GGAACAGTGAAGAAGAGAAG+AGG | + | chr1.1:15381858-15381877 | MS.gene33624:intron | 45.0% | |
| GGCATGCCACAACATTTAAC+AGG | + | chr1.1:15384243-15384262 | MS.gene33624:intron | 45.0% | |
| GTCGGTGAAGTGTGATAAAG+AGG | - | chr1.1:15381942-15381961 | None:intergenic | 45.0% | |
| GTCTTGCTCAAAAGGAAGGT+CGG | - | chr1.1:15381960-15381979 | None:intergenic | 45.0% | |
| GTGAATCAGGAAGACTCAAC+AGG | - | chr1.1:15383655-15383674 | None:intergenic | 45.0% | |
| GTGTGCCAATTATTGTGGCA+CGG | + | chr1.1:15385928-15385947 | MS.gene33624:intron | 45.0% | |
| GTTACTTGAGGCCTTCCTTA+AGG | - | chr1.1:15383324-15383343 | None:intergenic | 45.0% | |
| TCAAGGAGACAACCTTGCTA+TGG | + | chr1.1:15382075-15382094 | MS.gene33624:CDS | 45.0% | |
| TCATGCAAAGCTGGAACATC+AGG | - | chr1.1:15384603-15384622 | None:intergenic | 45.0% | |
| TCCAGCTTTGCATGAACAGA+AGG | + | chr1.1:15384608-15384627 | MS.gene33624:CDS | 45.0% | |
| TGGGCCCAAAAGGATTAAAG+AGG | - | chr1.1:15383629-15383648 | None:intergenic | 45.0% | |
| TGGTGATCCTTGACATCACA+CGG | + | chr1.1:15382734-15382753 | MS.gene33624:intron | 45.0% | |
| TGGTGTACTCGTTACTCGTT+AGG | - | chr1.1:15385550-15385569 | None:intergenic | 45.0% | |
| ! | GGGGAAGTATAGAGAAGCAT+TGG | + | chr1.1:15384548-15384567 | MS.gene33624:CDS | 45.0% |
| ! | GTGTCGTTGTCTTGCTCAAA+AGG | - | chr1.1:15381968-15381987 | None:intergenic | 45.0% |
| !! | AGAATCCTTAAAGAGTGCCC+CGG | + | chr1.1:15383879-15383898 | MS.gene33624:intron | 45.0% |
| !! | TGACAGAGCTTTAGCTCTCA+AGG | + | chr1.1:15386183-15386202 | MS.gene33624:CDS | 45.0% |
| !! | TTTTAAGGGTAGGCTGCTAC+TGG | - | chr1.1:15382642-15382661 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr1.1:15385850-15385869 | MS.gene33624:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr1.1:15385869-15385850 | None:intergenic | 45.0% |
| !!! | TGCTACAGCGTTTTAAGGGT+AGG | - | chr1.1:15382652-15382671 | None:intergenic | 45.0% |
| AAGGTCTTAACTAGTGCCCC+AGG | - | chr1.1:15383772-15383791 | None:intergenic | 50.0% | |
| AATGTTAACCAGTGCCCCTG+GGG | + | chr1.1:15383753-15383772 | MS.gene33624:intron | 50.0% | |
| ACCACCATCTTTGTTGCAGG+AGG | + | chr1.1:15384527-15384546 | MS.gene33624:intron | 50.0% | |
| AGGTCTTAACTAGTGCCCCA+GGG | - | chr1.1:15383771-15383790 | None:intergenic | 50.0% | |
| CAACAGGAAATGGGCCCAAA+AGG | - | chr1.1:15383639-15383658 | None:intergenic | 50.0% | |
| CACCATCTTTGTTGCAGGAG+GGG | + | chr1.1:15384529-15384548 | MS.gene33624:intron | 50.0% | |
| CAGTGTAGCGGTATGCATCA+GGG | - | chr1.1:15382835-15382854 | None:intergenic | 50.0% | |
| CCACCATCTTTGTTGCAGGA+GGG | + | chr1.1:15384528-15384547 | MS.gene33624:intron | 50.0% | |
| CTGTGCTCTGCAGTTTCACT+AGG | + | chr1.1:15383579-15383598 | MS.gene33624:intron | 50.0% | |
| GAAATGTTAACCAGTGCCCC+TGG | + | chr1.1:15383751-15383770 | MS.gene33624:intron | 50.0% | |
| GCCAATTATTGTGGCACGGA+GGG | + | chr1.1:15385932-15385951 | MS.gene33624:intron | 50.0% | |
| GCCTTCTGTTCATGCAAAGC+TGG | - | chr1.1:15384612-15384631 | None:intergenic | 50.0% | |
| GGGAGAGGAAGATGCCAAAA+TGG | - | chr1.1:15383532-15383551 | None:intergenic | 50.0% | |
| TACAACAGCATGCATGGGAG+AGG | - | chr1.1:15383547-15383566 | None:intergenic | 50.0% | |
| TCAGTGTAGCGGTATGCATC+AGG | - | chr1.1:15382836-15382855 | None:intergenic | 50.0% | |
| TCCCTCCGTGCCACAATAAT+TGG | - | chr1.1:15385936-15385955 | None:intergenic | 50.0% | |
| TCTTGTTAACGAGTACCCCC+GGG | - | chr1.1:15383900-15383919 | None:intergenic | 50.0% | |
| TGCCAATTATTGTGGCACGG+AGG | + | chr1.1:15385931-15385950 | MS.gene33624:intron | 50.0% | |
| TTAGGAGTGAGCGATGCACA+TGG | - | chr1.1:15385498-15385517 | None:intergenic | 50.0% | |
| TTCCCCTCCTGCAACAAAGA+TGG | - | chr1.1:15384534-15384553 | None:intergenic | 50.0% | |
| TTGTTTCACAGCCCAGTTCG+CGG | + | chr1.1:15382789-15382808 | MS.gene33624:intron | 50.0% | |
| ! | ATTGAAACCATCGTGGGCTG+AGG | + | chr1.1:15385048-15385067 | MS.gene33624:CDS | 50.0% |
| ! | GTCTTGTTAACGAGTACCCC+CGG | - | chr1.1:15383901-15383920 | None:intergenic | 50.0% |
| !! | AATCCTTAAAGAGTGCCCCG+GGG | + | chr1.1:15383881-15383900 | MS.gene33624:intron | 50.0% |
| !! | AGGGTGCCATATCGATTTCG+TGG | - | chr1.1:15384073-15384092 | None:intergenic | 50.0% |
| !! | CCATATCGATTTCGTGGTGG+CGG | - | chr1.1:15384067-15384086 | None:intergenic | 50.0% |
| !! | GAATCCTTAAAGAGTGCCCC+GGG | + | chr1.1:15383880-15383899 | MS.gene33624:intron | 50.0% |
| !! | GTGCCATATCGATTTCGTGG+TGG | - | chr1.1:15384070-15384089 | None:intergenic | 50.0% |
| AAGTGTGACCCAAGCCTGCA+AGG | - | chr1.1:15386113-15386132 | None:intergenic | 55.0% | |
| AGGCTGCTACTGGACTGCAT+AGG | - | chr1.1:15382632-15382651 | None:intergenic | 55.0% | |
| ATTGACGGTCTCTGCATGGC+AGG | + | chr1.1:15385016-15385035 | MS.gene33624:intron | 55.0% | |
| CCCTCCTGCAACAAAGATGG+TGG | - | chr1.1:15384531-15384550 | None:intergenic | 55.0% | |
| CCGCCACCACGAAATCGATA+TGG | + | chr1.1:15384064-15384083 | MS.gene33624:intron | 55.0% | |
| CGGTTCAAAGTCCACAGAGG+AGG | - | chr1.1:15384047-15384066 | None:intergenic | 55.0% | |
| CTTGTTAACGAGTACCCCCG+GGG | - | chr1.1:15383899-15383918 | None:intergenic | 55.0% | |
| GGCAGAGCGCAGCTGAATTA+TGG | + | chr1.1:15386133-15386152 | MS.gene33624:CDS | 55.0% | |
| GGCTCGTTGGGTAGTTCAAC+TGG | + | chr1.1:15382236-15382255 | MS.gene33624:intron | 55.0% | |
| GGTCTTAACTAGTGCCCCAG+GGG | - | chr1.1:15383770-15383789 | None:intergenic | 55.0% | |
| TGGCGGTTCAAAGTCCACAG+AGG | - | chr1.1:15384050-15384069 | None:intergenic | 55.0% | |
| TTGCAGGCTTGGGTCACACT+TGG | + | chr1.1:15386112-15386131 | MS.gene33624:intron | 55.0% | |
| !! | ATCCTTAAAGAGTGCCCCGG+GGG | + | chr1.1:15383882-15383901 | MS.gene33624:intron | 55.0% |
| AAAGGTTTGCGGCCGCGAAC+TGG | - | chr1.1:15382804-15382823 | None:intergenic | 60.0% | |
| AAGGTTTGCGGCCGCGAACT+GGG | - | chr1.1:15382803-15382822 | None:intergenic | 60.0% | |
| ! | TACCCCCGGGGCACTCTTTA+AGG | - | chr1.1:15383887-15383906 | None:intergenic | 60.0% |
| ! | AACTAGTGCCCCAGGGGCAC+TGG | - | chr1.1:15383764-15383783 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 15380777 | 15386527 | 15380777 | ID=MS.gene33624 |
| chr1.1 | mRNA | 15380777 | 15386527 | 15380777 | ID=MS.gene33624.t1;Parent=MS.gene33624 |
| chr1.1 | exon | 15380777 | 15380791 | 15380777 | ID=MS.gene33624.t1.exon1;Parent=MS.gene33624.t1 |
| chr1.1 | CDS | 15380777 | 15380791 | 15380777 | ID=cds.MS.gene33624.t1;Parent=MS.gene33624.t1 |
| chr1.1 | exon | 15381974 | 15382096 | 15381974 | ID=MS.gene33624.t1.exon2;Parent=MS.gene33624.t1 |
| chr1.1 | CDS | 15381974 | 15382096 | 15381974 | ID=cds.MS.gene33624.t1;Parent=MS.gene33624.t1 |
| chr1.1 | exon | 15384546 | 15384684 | 15384546 | ID=MS.gene33624.t1.exon3;Parent=MS.gene33624.t1 |
| chr1.1 | CDS | 15384546 | 15384684 | 15384546 | ID=cds.MS.gene33624.t1;Parent=MS.gene33624.t1 |
| chr1.1 | exon | 15385038 | 15385069 | 15385038 | ID=MS.gene33624.t1.exon4;Parent=MS.gene33624.t1 |
| chr1.1 | CDS | 15385038 | 15385069 | 15385038 | ID=cds.MS.gene33624.t1;Parent=MS.gene33624.t1 |
| chr1.1 | exon | 15386118 | 15386204 | 15386118 | ID=MS.gene33624.t1.exon5;Parent=MS.gene33624.t1 |
| chr1.1 | CDS | 15386118 | 15386204 | 15386118 | ID=cds.MS.gene33624.t1;Parent=MS.gene33624.t1 |
| chr1.1 | exon | 15386393 | 15386527 | 15386393 | ID=MS.gene33624.t1.exon6;Parent=MS.gene33624.t1 |
| chr1.1 | CDS | 15386393 | 15386527 | 15386393 | ID=cds.MS.gene33624.t1;Parent=MS.gene33624.t1 |
| Gene Sequence |
| Protein sequence |
