Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052412.t1 | XP_013453041.1 | 97.9 | 191 | 4 | 0 | 1 | 191 | 1 | 191 | 1.10E-97 | 365.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052412.t1 | Q9ZNS1 | 81.6 | 190 | 35 | 0 | 1 | 190 | 1 | 190 | 1.6e-84 | 313.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052412.t1 | B7FGT0 | 97.9 | 191 | 4 | 0 | 1 | 191 | 1 | 191 | 8.1e-98 | 365.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050791 | MS.gene052412 | 0.818751 | 1.66E-52 | -1.69E-46 |
| MS.gene052412 | MS.gene057092 | 0.801369 | 9.30E-49 | -1.69E-46 |
| MS.gene052412 | MS.gene057643 | 0.815234 | 1.03E-51 | -1.69E-46 |
| MS.gene052412 | MS.gene06803 | 0.819706 | 1.01E-52 | -1.69E-46 |
| MS.gene052412 | MS.gene072591 | 0.822752 | 2.00E-53 | -1.69E-46 |
| MS.gene052412 | MS.gene074262 | 0.804826 | 1.79E-49 | -1.69E-46 |
| MS.gene052412 | MS.gene08521 | 0.80745 | 5.02E-50 | -1.69E-46 |
| MS.gene052412 | MS.gene22784 | 0.832088 | 1.15E-55 | -1.69E-46 |
| MS.gene052412 | MS.gene23303 | 0.83987 | 1.22E-57 | -1.69E-46 |
| MS.gene052412 | MS.gene24639 | 0.832399 | 9.67E-56 | -1.69E-46 |
| MS.gene052412 | MS.gene28147 | 0.828117 | 1.07E-54 | -1.69E-46 |
| MS.gene052412 | MS.gene31991 | 0.818909 | 1.53E-52 | -1.69E-46 |
| MS.gene052412 | MS.gene38222 | 0.837531 | 4.92E-57 | -1.69E-46 |
| MS.gene052412 | MS.gene40831 | 0.814215 | 1.73E-51 | -1.69E-46 |
| MS.gene052412 | MS.gene49109 | 0.80924 | 2.09E-50 | -1.69E-46 |
| MS.gene052412 | MS.gene50640 | 0.800775 | 1.23E-48 | -1.69E-46 |
| MS.gene052412 | MS.gene50756 | 0.814841 | 1.25E-51 | -1.69E-46 |
| MS.gene052412 | MS.gene50758 | 0.810419 | 1.16E-50 | -1.69E-46 |
| MS.gene052412 | MS.gene52415 | 0.805787 | 1.13E-49 | -1.69E-46 |
| MS.gene052412 | MS.gene55890 | 0.815588 | 8.56E-52 | -1.69E-46 |
| MS.gene052412 | MS.gene61251 | 0.8047 | 1.90E-49 | -1.69E-46 |
| MS.gene052412 | MS.gene63450 | 0.988189 | 4.72E-173 | -1.69E-46 |
| MS.gene052412 | MS.gene72382 | 0.807027 | 6.18E-50 | -1.69E-46 |
| MS.gene052412 | MS.gene74981 | 0.805069 | 1.59E-49 | -1.69E-46 |
| MS.gene052412 | MS.gene81099 | 0.82407 | 9.85E-54 | -1.69E-46 |
| MS.gene052412 | MS.gene82038 | 0.835568 | 1.56E-56 | -1.69E-46 |
| MS.gene052412 | MS.gene82545 | 0.839033 | 2.02E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene052412 | MS.gene83444 | PPI |
| MS.gene052412 | MS.gene72768 | PPI |
| MS.gene052412 | MS.gene82426 | PPI |
| MS.gene052412 | MS.gene028153 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052412.t1 | MTR_6g085000 | 97.906 | 191 | 4 | 0 | 1 | 191 | 1 | 191 | 2.18e-137 | 381 |
| MS.gene052412.t1 | MTR_6g021670 | 97.382 | 191 | 5 | 0 | 1 | 191 | 1 | 191 | 4.81e-137 | 380 |
| MS.gene052412.t1 | MTR_8g087480 | 63.636 | 44 | 8 | 1 | 145 | 188 | 51 | 86 | 8.01e-12 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052412.t1 | AT1G48830 | 79.058 | 191 | 40 | 0 | 1 | 191 | 1 | 191 | 1.48e-114 | 324 |
| MS.gene052412.t1 | AT1G48830 | 79.058 | 191 | 40 | 0 | 1 | 191 | 1 | 191 | 1.48e-114 | 324 |
| MS.gene052412.t1 | AT3G02560 | 79.581 | 191 | 39 | 0 | 1 | 191 | 1 | 191 | 5.50e-113 | 320 |
| MS.gene052412.t1 | AT3G02560 | 79.581 | 191 | 39 | 0 | 1 | 191 | 1 | 191 | 5.50e-113 | 320 |
| MS.gene052412.t1 | AT3G02560 | 79.581 | 191 | 39 | 0 | 1 | 191 | 1 | 191 | 5.50e-113 | 320 |
| MS.gene052412.t1 | AT5G16130 | 80.319 | 188 | 37 | 0 | 1 | 188 | 1 | 188 | 1.92e-112 | 318 |
Find 51 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAGCCAAGTTGATGTTTC+TGG | 0.145762 | 6.1:+74576319 | MS.gene052412:intron |
| TCCTCAATCTGTAGGGGATA+TGG | 0.261869 | 6.1:-74576363 | None:intergenic |
| AGAATCTACGCCTCAGTAAC+AGG | 0.280462 | 6.1:-74577439 | None:intergenic |
| TGAGCAGCGGAGCCTTTCTT+TGG | 0.288203 | 6.1:-74576991 | None:intergenic |
| ATAGTTTACCTTCATGATCT+TGG | 0.292174 | 6.1:-74577121 | None:intergenic |
| AAATTCACGTCAAGCTCGTT+AGG | 0.363074 | 6.1:+74576398 | MS.gene052412:CDS |
| CGTACTAGATACAGAATTGA+TGG | 0.367485 | 6.1:+74577096 | MS.gene052412:CDS |
| GTTGCAGGCTTTGTTTGATC+TGG | 0.412438 | 6.1:+74576158 | MS.gene052412:intron |
| CGCTGAGCCTACTGAATTTG+AGG | 0.426295 | 6.1:+74576025 | MS.gene052412:CDS |
| GCAGCGGAGCCTTTCTTTGG+TGG | 0.435938 | 6.1:-74576988 | None:intergenic |
| TTGTGAATATGTTTACTTCA+AGG | 0.441187 | 6.1:+74575979 | None:intergenic |
| GCAGTTTACAGGAAACTCTC+AGG | 0.456482 | 6.1:+74577394 | MS.gene052412:CDS |
| ATTTGAGGAGTCAGTTGGAC+AGG | 0.472058 | 6.1:+74576040 | MS.gene052412:CDS |
| TGTTACCTGCTGAGATTGTT+GGG | 0.479284 | 6.1:+74577070 | MS.gene052412:CDS |
| TGGTGGCCTGACGATTCTCC+TGG | 0.483590 | 6.1:-74576971 | None:intergenic |
| GTGTTACCTGCTGAGATTGT+TGG | 0.484291 | 6.1:+74577069 | MS.gene052412:CDS |
| TCCCCTACAGATTGAGGAAG+GGG | 0.499187 | 6.1:+74576368 | MS.gene052412:CDS |
| CGTGGACAGCAGTGAGTGTA+CGG | 0.505350 | 6.1:-74577026 | None:intergenic |
| ATCGTCAGGCCACCAAAGAA+AGG | 0.508890 | 6.1:+74576979 | MS.gene052412:CDS |
| TTCTGGAAACCGCAAGGCTG+TGG | 0.509249 | 6.1:+74576336 | MS.gene052412:CDS |
| TCCATATCCCCTACAGATTG+AGG | 0.509912 | 6.1:+74576362 | MS.gene052412:CDS |
| TTGCCACCAGGAGAATCGTC+AGG | 0.510117 | 6.1:+74576965 | MS.gene052412:CDS |
| GAAGAAAATCAGCAAGGACA+AGG | 0.510615 | 6.1:+74576001 | MS.gene052412:CDS |
| GAACCCCTTCCTCAATCTGT+AGG | 0.515858 | 6.1:-74576371 | None:intergenic |
| AACCCCTTCCTCAATCTGTA+GGG | 0.520673 | 6.1:-74576370 | None:intergenic |
| ACTGAATTTGAGGAGTCAGT+TGG | 0.548538 | 6.1:+74576035 | MS.gene052412:CDS |
| AATTCACGTCAAGCTCGTTA+GGG | 0.550766 | 6.1:+74576399 | MS.gene052412:CDS |
| GCTGCGTGGACGCTGAGCAG+CGG | 0.558388 | 6.1:-74577004 | None:intergenic |
| CGTTTCCCAACAATCTCAGC+AGG | 0.558735 | 6.1:-74577075 | None:intergenic |
| GTTTGAGTACCCTGTTACTG+AGG | 0.572498 | 6.1:+74577429 | MS.gene052412:CDS |
| TATCCCCTACAGATTGAGGA+AGG | 0.573232 | 6.1:+74576366 | MS.gene052412:CDS |
| GGTTTCCAGAAACATCAACT+TGG | 0.575562 | 6.1:-74576324 | None:intergenic |
| ATGTAATCCTCATTGCCACC+AGG | 0.584954 | 6.1:+74576953 | MS.gene052412:CDS |
| CGATTCTCCTGGTGGCAATG+AGG | 0.590532 | 6.1:-74576960 | None:intergenic |
| AAGAAAATCAGCAAGGACAA+GGG | 0.599976 | 6.1:+74576002 | MS.gene052412:CDS |
| CAGTTTACAGGAAACTCTCA+GGG | 0.612531 | 6.1:+74577395 | MS.gene052412:CDS |
| TGAGAAGAAATTCAGCGGAA+AGG | 0.621961 | 6.1:+74576426 | MS.gene052412:CDS |
| TGATGTTTCTGGAAACCGCA+AGG | 0.622049 | 6.1:+74576330 | MS.gene052412:CDS |
| ATCCCCTACAGATTGAGGAA+GGG | 0.622569 | 6.1:+74576367 | MS.gene052412:CDS |
| ACTGACTCCTCAAATTCAGT+AGG | 0.622702 | 6.1:-74576032 | None:intergenic |
| ACCCCTTCCTCAATCTGTAG+GGG | 0.633929 | 6.1:-74576369 | None:intergenic |
| TGATGGATCCAAGATCATGA+AGG | 0.639271 | 6.1:+74577113 | MS.gene052412:CDS |
| TGTCCACGAGGCAATGCTCG+AGG | 0.642990 | 6.1:+74577041 | MS.gene052412:CDS |
| TTCAAGGAAGAAAATCAGCA+AGG | 0.648771 | 6.1:+74575995 | MS.gene052412:CDS |
| GCAGTGAGTGTACGGCTGCG+TGG | 0.657285 | 6.1:-74577018 | None:intergenic |
| TACACTCACTGCTGTCCACG+AGG | 0.659160 | 6.1:+74577029 | MS.gene052412:CDS |
| TGGCCTGACGATTCTCCTGG+TGG | 0.662830 | 6.1:-74576968 | None:intergenic |
| TATGGATAACCACAGCCTTG+CGG | 0.675676 | 6.1:-74576345 | None:intergenic |
| GAATCTACGCCTCAGTAACA+GGG | 0.678065 | 6.1:-74577438 | None:intergenic |
| CATCCTCGAGCATTGCCTCG+TGG | 0.690997 | 6.1:-74577044 | None:intergenic |
| GAGCTTGAGAAGAAATTCAG+CGG | 0.694607 | 6.1:+74576421 | MS.gene052412:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGGAACAAAAAATTGT+CGG | - | chr6.1:74576523-74576542 | None:intergenic | 20.0% |
| !! | AGAATAAAGTTCTTGAAATA+AGG | - | chr6.1:74576572-74576591 | None:intergenic | 20.0% |
| !! | CAAATTATTTAGTGTATGTT+TGG | - | chr6.1:74576837-74576856 | None:intergenic | 20.0% |
| !! | TTAAAGCAATTTAAAAACCA+AGG | - | chr6.1:74576607-74576626 | None:intergenic | 20.0% |
| !!! | AGGTTATATATTGATTACTA+CGG | + | chr6.1:74576060-74576079 | MS.gene052412:intron | 20.0% |
| ! | TATTTAGTGTATGTTTGGTT+TGG | - | chr6.1:74576832-74576851 | None:intergenic | 25.0% |
| !! | TGTGAGAAAACAATTTTTCA+AGG | - | chr6.1:74576878-74576897 | None:intergenic | 25.0% |
| !!! | AGTAACTTTTGGAAATTGTT+TGG | - | chr6.1:74577155-74577174 | None:intergenic | 25.0% |
| !!! | TGCTTATTTTCACATTAGTT+TGG | - | chr6.1:74577211-74577230 | None:intergenic | 25.0% |
| AACAAAAACTCACGATTACA+TGG | + | chr6.1:74576730-74576749 | MS.gene052412:intron | 30.0% | |
| ATAGTTTACCTTCATGATCT+TGG | - | chr6.1:74577124-74577143 | None:intergenic | 30.0% | |
| CTAATGAACCTTAAACTTGT+AGG | + | chr6.1:74576930-74576949 | MS.gene052412:intron | 30.0% | |
| CTGTAAAACTGAAGTTAATC+AGG | + | chr6.1:74576658-74576677 | MS.gene052412:intron | 30.0% | |
| GACAGAATCGTAATAAAAGA+TGG | - | chr6.1:74576498-74576517 | None:intergenic | 30.0% | |
| GATTACATCCTACAAGTTTA+AGG | - | chr6.1:74576941-74576960 | None:intergenic | 30.0% | |
| TTAGAAAGAATAACTGGCAA+AGG | - | chr6.1:74576470-74576489 | None:intergenic | 30.0% | |
| ! | TCTGTGTATATAGGTGTTTT+TGG | + | chr6.1:74577324-74577343 | MS.gene052412:intron | 30.0% |
| ! | TCTTGTGTTTCTGTGTATAT+AGG | + | chr6.1:74577315-74577334 | MS.gene052412:intron | 30.0% |
| !! | CAGTATTGTTTTTCTCCTTT+GGG | - | chr6.1:74577351-74577370 | None:intergenic | 30.0% |
| !! | TCAGTATTGTTTTTCTCCTT+TGG | - | chr6.1:74577352-74577371 | None:intergenic | 30.0% |
| !!! | TGTTTTCAATTTGTTGTTGC+AGG | + | chr6.1:74576143-74576162 | MS.gene052412:intron | 30.0% |
| !!! | TTCAAGCTTTGAGTAACTTT+TGG | - | chr6.1:74577166-74577185 | None:intergenic | 30.0% |
| AAGAAAATCAGCAAGGACAA+GGG | + | chr6.1:74576002-74576021 | MS.gene052412:CDS | 35.0% | |
| CGAGTAGAAGACAAAGAAAT+TGG | - | chr6.1:74576539-74576558 | None:intergenic | 35.0% | |
| CGTACTAGATACAGAATTGA+TGG | + | chr6.1:74577096-74577115 | MS.gene052412:CDS | 35.0% | |
| GATAAAGAGAAGCTACAAAG+TGG | - | chr6.1:74576761-74576780 | None:intergenic | 35.0% | |
| GTCTAAGCATGTGTTTGATT+TGG | + | chr6.1:74576686-74576705 | MS.gene052412:intron | 35.0% | |
| GTGCAGTTAGAAAGAATAAC+TGG | - | chr6.1:74576476-74576495 | None:intergenic | 35.0% | |
| GTGTAAGGATGTGTTCTTTA+TGG | + | chr6.1:74576237-74576256 | MS.gene052412:intron | 35.0% | |
| TACATCAATTCTGCAGTGTA+AGG | + | chr6.1:74576222-74576241 | MS.gene052412:intron | 35.0% | |
| TGGCTGTAGATAACAGAAAA+CGG | - | chr6.1:74576307-74576326 | None:intergenic | 35.0% | |
| TTCAAGGAAGAAAATCAGCA+AGG | + | chr6.1:74575995-74576014 | MS.gene052412:CDS | 35.0% | |
| ! | AAACGTTTTCTGCAGTTTAC+AGG | + | chr6.1:74577383-74577402 | MS.gene052412:CDS | 35.0% |
| ! | ACTATTGTTGTTGCTGTGAT+TGG | + | chr6.1:74576083-74576102 | MS.gene052412:intron | 35.0% |
| ! | ATTCTGTTTTGCAATCTCCT+TGG | + | chr6.1:74576587-74576606 | MS.gene052412:intron | 35.0% |
| AAATTCACGTCAAGCTCGTT+AGG | + | chr6.1:74576398-74576417 | MS.gene052412:CDS | 40.0% | |
| AACTGAAGTTAATCAGGCTG+CGG | + | chr6.1:74576664-74576683 | MS.gene052412:intron | 40.0% | |
| AATTCACGTCAAGCTCGTTA+GGG | + | chr6.1:74576399-74576418 | MS.gene052412:CDS | 40.0% | |
| ACTGAATTTGAGGAGTCAGT+TGG | + | chr6.1:74576035-74576054 | MS.gene052412:CDS | 40.0% | |
| CAGTTTACAGGAAACTCTCA+GGG | + | chr6.1:74577395-74577414 | MS.gene052412:CDS | 40.0% | |
| GAAGAAAATCAGCAAGGACA+AGG | + | chr6.1:74576001-74576020 | MS.gene052412:CDS | 40.0% | |
| GAGCTTGAGAAGAAATTCAG+CGG | + | chr6.1:74576421-74576440 | MS.gene052412:CDS | 40.0% | |
| GGTTTCCAGAAACATCAACT+TGG | - | chr6.1:74576327-74576346 | None:intergenic | 40.0% | |
| TGAGAAGAAATTCAGCGGAA+AGG | + | chr6.1:74576426-74576445 | MS.gene052412:CDS | 40.0% | |
| TGTTACCTGCTGAGATTGTT+GGG | + | chr6.1:74577070-74577089 | MS.gene052412:CDS | 40.0% | |
| ! | ACTGACTCCTCAAATTCAGT+AGG | - | chr6.1:74576035-74576054 | None:intergenic | 40.0% |
| ! | TGATGGATCCAAGATCATGA+AGG | + | chr6.1:74577113-74577132 | MS.gene052412:CDS | 40.0% |
| !! | TACAGCCAAGTTGATGTTTC+TGG | + | chr6.1:74576319-74576338 | MS.gene052412:intron | 40.0% |
| !! | TCAGATCACTTTTGAGCTCA+TGG | - | chr6.1:74576194-74576213 | None:intergenic | 40.0% |
| !!! | ATAGGTGTTTTTGGACCCAA+AGG | + | chr6.1:74577333-74577352 | MS.gene052412:intron | 40.0% |
| AACCCCTTCCTCAATCTGTA+GGG | - | chr6.1:74576373-74576392 | None:intergenic | 45.0% | |
| ATCCCCTACAGATTGAGGAA+GGG | + | chr6.1:74576367-74576386 | MS.gene052412:CDS | 45.0% | |
| ATGCCTTGTAATCATGCGAG+TGG | + | chr6.1:74576793-74576812 | MS.gene052412:intron | 45.0% | |
| ATGTAATCCTCATTGCCACC+AGG | + | chr6.1:74576953-74576972 | MS.gene052412:CDS | 45.0% | |
| ATTTGAGGAGTCAGTTGGAC+AGG | + | chr6.1:74576040-74576059 | MS.gene052412:CDS | 45.0% | |
| GCAGTTTACAGGAAACTCTC+AGG | + | chr6.1:74577394-74577413 | MS.gene052412:CDS | 45.0% | |
| GTGTTACCTGCTGAGATTGT+TGG | + | chr6.1:74577069-74577088 | MS.gene052412:CDS | 45.0% | |
| GTTTGAGTACCCTGTTACTG+AGG | + | chr6.1:74577429-74577448 | MS.gene052412:CDS | 45.0% | |
| TATCCCCTACAGATTGAGGA+AGG | + | chr6.1:74576366-74576385 | MS.gene052412:CDS | 45.0% | |
| TATGGATAACCACAGCCTTG+CGG | - | chr6.1:74576348-74576367 | None:intergenic | 45.0% | |
| TCCATATCCCCTACAGATTG+AGG | + | chr6.1:74576362-74576381 | MS.gene052412:CDS | 45.0% | |
| TCCTCAATCTGTAGGGGATA+TGG | - | chr6.1:74576366-74576385 | None:intergenic | 45.0% | |
| TTGCCACTCGCATGATTACA+AGG | - | chr6.1:74576799-74576818 | None:intergenic | 45.0% | |
| ! | CGAGCTTGACGTGAATTTTG+CGG | - | chr6.1:74576396-74576415 | None:intergenic | 45.0% |
| !! | GTTGCAGGCTTTGTTTGATC+TGG | + | chr6.1:74576158-74576177 | MS.gene052412:intron | 45.0% |
| !! | TGATGTTTCTGGAAACCGCA+AGG | + | chr6.1:74576330-74576349 | MS.gene052412:CDS | 45.0% |
| ACCCCTTCCTCAATCTGTAG+GGG | - | chr6.1:74576372-74576391 | None:intergenic | 50.0% | |
| ATCGTCAGGCCACCAAAGAA+AGG | + | chr6.1:74576979-74576998 | MS.gene052412:CDS | 50.0% | |
| CGCTGAGCCTACTGAATTTG+AGG | + | chr6.1:74576025-74576044 | MS.gene052412:CDS | 50.0% | |
| CGTTTCCCAACAATCTCAGC+AGG | - | chr6.1:74577078-74577097 | None:intergenic | 50.0% | |
| GAACCCCTTCCTCAATCTGT+AGG | - | chr6.1:74576374-74576393 | None:intergenic | 50.0% | |
| TCCCCTACAGATTGAGGAAG+GGG | + | chr6.1:74576368-74576387 | MS.gene052412:CDS | 50.0% | |
| CGATTCTCCTGGTGGCAATG+AGG | - | chr6.1:74576963-74576982 | None:intergenic | 55.0% | |
| CGTGGACAGCAGTGAGTGTA+CGG | - | chr6.1:74577029-74577048 | None:intergenic | 55.0% | |
| TACACTCACTGCTGTCCACG+AGG | + | chr6.1:74577029-74577048 | MS.gene052412:CDS | 55.0% | |
| TGAGCAGCGGAGCCTTTCTT+TGG | - | chr6.1:74576994-74577013 | None:intergenic | 55.0% | |
| TTGCCACCAGGAGAATCGTC+AGG | + | chr6.1:74576965-74576984 | MS.gene052412:CDS | 55.0% | |
| ! | TTCTGGAAACCGCAAGGCTG+TGG | + | chr6.1:74576336-74576355 | MS.gene052412:CDS | 55.0% |
| GCAGCGGAGCCTTTCTTTGG+TGG | - | chr6.1:74576991-74577010 | None:intergenic | 60.0% | |
| TGGCCTGACGATTCTCCTGG+TGG | - | chr6.1:74576971-74576990 | None:intergenic | 60.0% | |
| TGGTGGCCTGACGATTCTCC+TGG | - | chr6.1:74576974-74576993 | None:intergenic | 60.0% | |
| TGTCCACGAGGCAATGCTCG+AGG | + | chr6.1:74577041-74577060 | MS.gene052412:CDS | 60.0% | |
| ! | CATCCTCGAGCATTGCCTCG+TGG | - | chr6.1:74577047-74577066 | None:intergenic | 60.0% |
| GCAGTGAGTGTACGGCTGCG+TGG | - | chr6.1:74577021-74577040 | None:intergenic | 65.0% | |
| GCTGCGTGGACGCTGAGCAG+CGG | - | chr6.1:74577007-74577026 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 74575987 | 74577456 | 74575987 | ID=MS.gene052412 |
| chr6.1 | mRNA | 74575987 | 74577456 | 74575987 | ID=MS.gene052412.t1;Parent=MS.gene052412 |
| chr6.1 | exon | 74575987 | 74576061 | 74575987 | ID=MS.gene052412.t1.exon1;Parent=MS.gene052412.t1 |
| chr6.1 | CDS | 74575987 | 74576061 | 74575987 | ID=cds.MS.gene052412.t1;Parent=MS.gene052412.t1 |
| chr6.1 | exon | 74576165 | 74576238 | 74576165 | ID=MS.gene052412.t1.exon2;Parent=MS.gene052412.t1 |
| chr6.1 | CDS | 74576165 | 74576238 | 74576165 | ID=cds.MS.gene052412.t1;Parent=MS.gene052412.t1 |
| chr6.1 | exon | 74576324 | 74576447 | 74576324 | ID=MS.gene052412.t1.exon3;Parent=MS.gene052412.t1 |
| chr6.1 | CDS | 74576324 | 74576447 | 74576324 | ID=cds.MS.gene052412.t1;Parent=MS.gene052412.t1 |
| chr6.1 | exon | 74576952 | 74577134 | 74576952 | ID=MS.gene052412.t1.exon4;Parent=MS.gene052412.t1 |
| chr6.1 | CDS | 74576952 | 74577134 | 74576952 | ID=cds.MS.gene052412.t1;Parent=MS.gene052412.t1 |
| chr6.1 | exon | 74577337 | 74577456 | 74577337 | ID=MS.gene052412.t1.exon5;Parent=MS.gene052412.t1 |
| chr6.1 | CDS | 74577337 | 74577456 | 74577337 | ID=cds.MS.gene052412.t1;Parent=MS.gene052412.t1 |
| Gene Sequence |
| Protein sequence |
