Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55890.t1 | XP_003630662.2 | 100 | 121 | 0 | 0 | 1 | 121 | 1 | 121 | 5.00E-59 | 236.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55890.t1 | P46290 | 87.6 | 121 | 14 | 1 | 1 | 121 | 1 | 120 | 8.6e-52 | 204.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55890.t1 | B7FGL4 | 100.0 | 121 | 0 | 0 | 1 | 121 | 1 | 121 | 3.6e-59 | 236.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049306 | MS.gene55890 | 0.81409 | 1.84E-51 | -1.69E-46 |
| MS.gene049361 | MS.gene55890 | 0.843086 | 1.74E-58 | -1.69E-46 |
| MS.gene049387 | MS.gene55890 | 0.888658 | 4.86E-73 | -1.69E-46 |
| MS.gene050134 | MS.gene55890 | 0.938125 | 1.13E-98 | -1.69E-46 |
| MS.gene050252 | MS.gene55890 | 0.841125 | 5.75E-58 | -1.69E-46 |
| MS.gene050791 | MS.gene55890 | 0.918258 | 1.95E-86 | -1.69E-46 |
| MS.gene050912 | MS.gene55890 | 0.875237 | 3.61E-68 | -1.69E-46 |
| MS.gene051904 | MS.gene55890 | 0.857321 | 1.77E-62 | -1.69E-46 |
| MS.gene051925 | MS.gene55890 | 0.81433 | 1.63E-51 | -1.69E-46 |
| MS.gene051984 | MS.gene55890 | 0.882861 | 7.30E-71 | -1.69E-46 |
| MS.gene052209 | MS.gene55890 | 0.813181 | 2.91E-51 | -1.69E-46 |
| MS.gene052412 | MS.gene55890 | 0.815588 | 8.56E-52 | -1.69E-46 |
| MS.gene052664 | MS.gene55890 | 0.908998 | 9.25E-82 | -1.69E-46 |
| MS.gene052666 | MS.gene55890 | 0.867903 | 9.71E-66 | -1.69E-46 |
| MS.gene053224 | MS.gene55890 | 0.93745 | 3.40E-98 | -1.69E-46 |
| MS.gene054624 | MS.gene55890 | 0.844728 | 6.32E-59 | -1.69E-46 |
| MS.gene054662 | MS.gene55890 | 0.811746 | 6.00E-51 | -1.69E-46 |
| MS.gene055232 | MS.gene55890 | 0.813044 | 3.12E-51 | -1.69E-46 |
| MS.gene057092 | MS.gene55890 | 0.826986 | 2.01E-54 | -1.69E-46 |
| MS.gene057272 | MS.gene55890 | 0.924071 | 1.15E-89 | -1.69E-46 |
| MS.gene057321 | MS.gene55890 | 0.820949 | 5.23E-53 | -1.69E-46 |
| MS.gene057641 | MS.gene55890 | 0.876722 | 1.11E-68 | -1.69E-46 |
| MS.gene057643 | MS.gene55890 | 0.911322 | 6.94E-83 | -1.69E-46 |
| MS.gene057988 | MS.gene55890 | 0.822221 | 2.66E-53 | -1.69E-46 |
| MS.gene057990 | MS.gene55890 | 0.800279 | 1.55E-48 | -1.69E-46 |
| MS.gene058994 | MS.gene55890 | 0.824624 | 7.30E-54 | -1.69E-46 |
| MS.gene059340 | MS.gene55890 | 0.885868 | 5.61E-72 | -1.69E-46 |
| MS.gene060483 | MS.gene55890 | 0.902932 | 5.84E-79 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene55890 | MS.gene031484 | PPI |
| MS.gene55890 | MS.gene08260 | PPI |
| MS.gene55890 | MS.gene053790 | PPI |
| MS.gene55890 | MS.gene031406 | PPI |
| MS.gene06169 | MS.gene55890 | PPI |
| MS.gene55890 | MS.gene012331 | PPI |
| MS.gene55890 | MS.gene20153 | PPI |
| MS.gene55890 | MS.gene99599 | PPI |
| MS.gene073324 | MS.gene55890 | PPI |
| MS.gene55890 | MS.gene08259 | PPI |
| MS.gene049030 | MS.gene55890 | PPI |
| MS.gene006800 | MS.gene55890 | PPI |
| MS.gene065652 | MS.gene55890 | PPI |
| MS.gene068781 | MS.gene55890 | PPI |
| MS.gene55890 | MS.gene09187 | PPI |
| MS.gene55890 | MS.gene66352 | PPI |
| MS.gene55890 | MS.gene012333 | PPI |
| MS.gene55890 | MS.gene029547 | PPI |
| MS.gene55890 | MS.gene96312 | PPI |
| MS.gene55890 | MS.gene96780 | PPI |
| MS.gene92970 | MS.gene55890 | PPI |
| MS.gene059846 | MS.gene55890 | PPI |
| MS.gene55890 | MS.gene023381 | PPI |
| MS.gene55890 | MS.gene064028 | PPI |
| MS.gene55890 | MS.gene030304 | PPI |
| MS.gene55890 | MS.gene75054 | PPI |
| MS.gene55890 | MS.gene09046 | PPI |
| MS.gene55890 | MS.gene57660 | PPI |
| MS.gene55890 | MS.gene065189 | PPI |
| MS.gene09188 | MS.gene55890 | PPI |
| MS.gene55890 | MS.gene56525 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55890.t1 | MTR_8g101980 | 100.000 | 121 | 0 | 0 | 1 | 121 | 1 | 121 | 5.31e-85 | 243 |
| MS.gene55890.t1 | MTR_6g091630 | 97.521 | 121 | 3 | 0 | 1 | 121 | 1 | 121 | 8.29e-83 | 238 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55890.t1 | AT5G56710 | 83.333 | 114 | 19 | 0 | 8 | 121 | 6 | 119 | 5.84e-67 | 197 |
| MS.gene55890.t1 | AT4G26230 | 82.456 | 114 | 20 | 0 | 8 | 121 | 6 | 119 | 2.06e-66 | 196 |
| MS.gene55890.t1 | AT2G19740 | 81.897 | 116 | 21 | 0 | 6 | 121 | 4 | 119 | 2.90e-66 | 196 |
| MS.gene55890.t1 | AT5G56710 | 58.772 | 114 | 13 | 1 | 8 | 121 | 6 | 85 | 6.30e-38 | 123 |
Find 50 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATCTCCTTTATTGCTTT+AGG | 0.186329 | 4.3:+3455773 | None:intergenic |
| TCAAGTTGAACAAGGCTATT+TGG | 0.242228 | 4.3:-3455703 | MS.gene55890:CDS |
| CATTAGTTCCCATAGCCTTT+TGG | 0.252576 | 4.3:+3455741 | None:intergenic |
| CAATCCTTTGAGCTCTTCCT+TGG | 0.276372 | 4.3:+3455565 | None:intergenic |
| GAAAGCTCCTAAAGCAATAA+AGG | 0.311659 | 4.3:-3455780 | MS.gene55890:CDS |
| CTCATCATCGTTCCTCTTGC+GGG | 0.315756 | 4.3:+3455634 | None:intergenic |
| AATCCTTTGAGCTCTTCCTT+GGG | 0.346185 | 4.3:+3455566 | None:intergenic |
| GAAGTGTCCCTAGGAGGGTT+AGG | 0.392774 | 4.3:-3455667 | MS.gene55890:CDS |
| GAGGCGTTTGTGGAGGTTGA+TGG | 0.411978 | 4.3:+3456383 | None:intergenic |
| GATCAGGAAGTTTGCCCAAA+AGG | 0.422618 | 4.3:-3455756 | MS.gene55890:CDS |
| ATGCGAACCCTAACCCTCCT+AGG | 0.432434 | 4.3:+3455659 | None:intergenic |
| CTAAAGCAATAAAGGAGATC+AGG | 0.445899 | 4.3:-3455772 | MS.gene55890:CDS |
| AAGGAAGAGCTCAAAGGATT+GGG | 0.447041 | 4.3:-3455563 | MS.gene55890:CDS |
| ACCAGCCATGGAGGCGTTTG+TGG | 0.449631 | 4.3:+3456373 | None:intergenic |
| CAAGGAAGAGCTCAAAGGAT+TGG | 0.452186 | 4.3:-3455564 | MS.gene55890:CDS |
| CCTCATCATCGTTCCTCTTG+CGG | 0.459607 | 4.3:+3455633 | None:intergenic |
| GAACAAGGCTATTTGGAGCC+AGG | 0.460263 | 4.3:-3455696 | MS.gene55890:CDS |
| TCCACAAACGCCTCCATGGC+TGG | 0.473615 | 4.3:-3456374 | MS.gene55890:intron |
| TAGGGACACTTCTGATCCCC+TGG | 0.478265 | 4.3:+3455678 | None:intergenic |
| CTCTTCCTTCCTACCGGCGC+CGG | 0.482937 | 4.3:+3456425 | None:intergenic |
| GAAGTTTGCCCAAAAGGCTA+TGG | 0.483900 | 4.3:-3455750 | MS.gene55890:CDS |
| GTGAAAATGGTGGAGAAGAC+CGG | 0.499433 | 4.3:-3456444 | None:intergenic |
| GAGGTTGATGGTGTACTCTC+TGG | 0.499941 | 4.3:+3456395 | None:intergenic |
| AAGTGTCCCTAGGAGGGTTA+GGG | 0.512529 | 4.3:-3455666 | MS.gene55890:CDS |
| ATCCTTTGAGCTCTTCCTTG+GGG | 0.520497 | 4.3:+3455567 | None:intergenic |
| AACAAGGCTATTTGGAGCCA+GGG | 0.528204 | 4.3:-3455695 | MS.gene55890:CDS |
| CACAAAGGTTATTGATGATG+AGG | 0.542190 | 4.3:-3455540 | MS.gene55890:CDS |
| GAACGATGATGAGGATGCTA+AGG | 0.543980 | 4.3:-3455624 | MS.gene55890:CDS |
| GAAGACCGGCGCCGGTAGGA+AGG | 0.546764 | 4.3:-3456430 | MS.gene55890:CDS |
| CGGCGCCGGTAGGAAGGAAG+AGG | 0.547239 | 4.3:-3456424 | MS.gene55890:CDS |
| ATAGAGAGAATTACCAGCCA+TGG | 0.558172 | 4.3:+3456361 | None:intergenic |
| AACCTCCACAAACGCCTCCA+TGG | 0.560698 | 4.3:-3456378 | MS.gene55890:CDS |
| AGGGGATCAGAAGTGTCCCT+AGG | 0.578761 | 4.3:-3455676 | MS.gene55890:CDS |
| GACAACCTCTTCCTTCCTAC+CGG | 0.582542 | 4.3:+3456419 | None:intergenic |
| AAGTTTGCCCAAAAGGCTAT+GGG | 0.584767 | 4.3:-3455749 | MS.gene55890:CDS |
| AGCCATGGAGGCGTTTGTGG+AGG | 0.589507 | 4.3:+3456376 | None:intergenic |
| TACTGTTGTTGAAATCCCCA+AGG | 0.603575 | 4.3:-3455582 | MS.gene55890:CDS |
| CCGCAAGAGGAACGATGATG+AGG | 0.607958 | 4.3:-3455633 | MS.gene55890:CDS |
| TGGAGAAGACCGGCGCCGGT+AGG | 0.608791 | 4.3:-3456434 | MS.gene55890:CDS |
| GATCAGAAGTGTCCCTAGGA+GGG | 0.609828 | 4.3:-3455672 | MS.gene55890:CDS |
| ATGGTGGAGAAGACCGGCGC+CGG | 0.610511 | 4.3:-3456438 | MS.gene55890:CDS |
| TGCGAACCCTAACCCTCCTA+GGG | 0.611019 | 4.3:+3455660 | None:intergenic |
| GGGTTCGCATTGCCCGCAAG+AGG | 0.617342 | 4.3:-3455646 | MS.gene55890:CDS |
| GGATCAGAAGTGTCCCTAGG+AGG | 0.618801 | 4.3:-3455673 | MS.gene55890:CDS |
| ATCCCCAAGGAAGAGCTCAA+AGG | 0.635127 | 4.3:-3455569 | MS.gene55890:CDS |
| ACAAGGCTATTTGGAGCCAG+GGG | 0.649532 | 4.3:-3455694 | MS.gene55890:CDS |
| GCTCAAAGGATTGGGCACAA+AGG | 0.653987 | 4.3:-3455555 | MS.gene55890:CDS |
| GAGAGAATTACCAGCCATGG+AGG | 0.681349 | 4.3:+3456364 | None:intergenic |
| AGTGGACGTCAAGTTGAACA+AGG | 0.683327 | 4.3:-3455711 | MS.gene55890:CDS |
| GGGAACTAATGATGTCAGAG+TGG | 0.705766 | 4.3:-3455729 | MS.gene55890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTAATCTCTTTAGA+AGG | - | chr4.3:3455739-3455758 | MS.gene55890:CDS | 15.0% |
| !!! | TTTACAAATATTTTGATAAC+CGG | - | chr4.3:3455984-3456003 | MS.gene55890:intron | 15.0% |
| !! | AAATAATACAAACGAGATAT+CGG | + | chr4.3:3456100-3456119 | None:intergenic | 20.0% |
| !! | ATCAGTTAAAATAACATCTA+CGG | + | chr4.3:3455965-3455984 | None:intergenic | 20.0% |
| !!! | TTACAAATATTTTGATAACC+GGG | - | chr4.3:3455985-3456004 | MS.gene55890:intron | 20.0% |
| ! | TAAATAGCATATCACAGAAA+TGG | - | chr4.3:3455908-3455927 | MS.gene55890:intron | 25.0% |
| !! | AAACAAAACATTTGCTAGAT+AGG | + | chr4.3:3455670-3455689 | None:intergenic | 25.0% |
| !! | AACAAAACATTTGCTAGATA+GGG | + | chr4.3:3455669-3455688 | None:intergenic | 25.0% |
| !! | GATATAGAGGAAAATTTTTG+TGG | - | chr4.3:3455701-3455720 | MS.gene55890:CDS | 25.0% |
| !!! | TCTTTAGAAGGTTTTTTCAA+TGG | - | chr4.3:3455751-3455770 | MS.gene55890:CDS | 25.0% |
| ! | AAAAGTCATTTCAGGTAAAG+GGG | + | chr4.3:3456059-3456078 | None:intergenic | 30.0% |
| ! | AGAAAAGTCATTTCAGGTAA+AGG | + | chr4.3:3456061-3456080 | None:intergenic | 30.0% |
| ! | CATCAAAATGAAAAGCACAA+GGG | + | chr4.3:3455789-3455808 | None:intergenic | 30.0% |
| ! | CTTTTCTATGGAGATTGTTT+CGG | - | chr4.3:3456074-3456093 | MS.gene55890:intron | 30.0% |
| ! | GAAAAGTCATTTCAGGTAAA+GGG | + | chr4.3:3456060-3456079 | None:intergenic | 30.0% |
| ! | TACCTGAAATGACTTTTCTA+TGG | - | chr4.3:3456062-3456081 | MS.gene55890:intron | 30.0% |
| ! | TCATCAAAATGAAAAGCACA+AGG | + | chr4.3:3455790-3455809 | None:intergenic | 30.0% |
| ! | TTGTTTTCGATCAGATATAG+AGG | - | chr4.3:3455688-3455707 | MS.gene55890:CDS | 30.0% |
| !! | GCTGTTTTGCATAATAACAA+AGG | + | chr4.3:3456162-3456181 | None:intergenic | 30.0% |
| ATAGCATATCACAGAAATGG+TGG | - | chr4.3:3455911-3455930 | MS.gene55890:intron | 35.0% | |
| CAAAACTATATTCATCCTCC+CGG | + | chr4.3:3456006-3456025 | None:intergenic | 35.0% | |
| CTAAAGCAATAAAGGAGATC+AGG | - | chr4.3:3456201-3456220 | MS.gene55890:intron | 35.0% | |
| CTCCATAGAAAAGTCATTTC+AGG | + | chr4.3:3456067-3456086 | None:intergenic | 35.0% | |
| CTGATCTCCTTTATTGCTTT+AGG | + | chr4.3:3456203-3456222 | None:intergenic | 35.0% | |
| GAAAGCTCCTAAAGCAATAA+AGG | - | chr4.3:3456193-3456212 | MS.gene55890:intron | 35.0% | |
| ! | ATTAGTTCCCATAGCCTTTT+GGG | + | chr4.3:3456234-3456253 | None:intergenic | 35.0% |
| !! | CACAAAGGTTATTGATGATG+AGG | - | chr4.3:3456433-3456452 | MS.gene55890:CDS | 35.0% |
| !! | TCAAGTTGAACAAGGCTATT+TGG | - | chr4.3:3456270-3456289 | MS.gene55890:intron | 35.0% |
| !!! | CAAATATTTTGATAACCGGG+AGG | - | chr4.3:3455988-3456007 | MS.gene55890:intron | 35.0% |
| AAGGAAGAGCTCAAAGGATT+GGG | - | chr4.3:3456410-3456429 | MS.gene55890:CDS | 40.0% | |
| AAGTTTGCCCAAAAGGCTAT+GGG | - | chr4.3:3456224-3456243 | MS.gene55890:intron | 40.0% | |
| AATCCTTTGAGCTCTTCCTT+GGG | + | chr4.3:3456410-3456429 | None:intergenic | 40.0% | |
| ATAGAGAGAATTACCAGCCA+TGG | + | chr4.3:3455615-3455634 | None:intergenic | 40.0% | |
| TACTGTTGTTGAAATCCCCA+AGG | - | chr4.3:3456391-3456410 | MS.gene55890:CDS | 40.0% | |
| ! | CATTAGTTCCCATAGCCTTT+TGG | + | chr4.3:3456235-3456254 | None:intergenic | 40.0% |
| ATCCTTTGAGCTCTTCCTTG+GGG | + | chr4.3:3456409-3456428 | None:intergenic | 45.0% | |
| CAAGGAAGAGCTCAAAGGAT+TGG | - | chr4.3:3456409-3456428 | MS.gene55890:CDS | 45.0% | |
| CAATCCTTTGAGCTCTTCCT+TGG | + | chr4.3:3456411-3456430 | None:intergenic | 45.0% | |
| GAACGATGATGAGGATGCTA+AGG | - | chr4.3:3456349-3456368 | MS.gene55890:intron | 45.0% | |
| GAAGTTTGCCCAAAAGGCTA+TGG | - | chr4.3:3456223-3456242 | MS.gene55890:intron | 45.0% | |
| GATCAGGAAGTTTGCCCAAA+AGG | - | chr4.3:3456217-3456236 | MS.gene55890:intron | 45.0% | |
| GGGAACTAATGATGTCAGAG+TGG | - | chr4.3:3456244-3456263 | MS.gene55890:intron | 45.0% | |
| ! | AACAAGGCTATTTGGAGCCA+GGG | - | chr4.3:3456278-3456297 | MS.gene55890:intron | 45.0% |
| !! | AGTGGACGTCAAGTTGAACA+AGG | - | chr4.3:3456262-3456281 | MS.gene55890:intron | 45.0% |
| AAGTGTCCCTAGGAGGGTTA+GGG | - | chr4.3:3456307-3456326 | MS.gene55890:intron | 50.0% | |
| ATCCCCAAGGAAGAGCTCAA+AGG | - | chr4.3:3456404-3456423 | MS.gene55890:CDS | 50.0% | |
| CCTCATCATCGTTCCTCTTG+CGG | + | chr4.3:3456343-3456362 | None:intergenic | 50.0% | |
| CTCATCATCGTTCCTCTTGC+GGG | + | chr4.3:3456342-3456361 | None:intergenic | 50.0% | |
| GACAACCTCTTCCTTCCTAC+CGG | + | chr4.3:3455557-3455576 | None:intergenic | 50.0% | |
| GAGAGAATTACCAGCCATGG+AGG | + | chr4.3:3455612-3455631 | None:intergenic | 50.0% | |
| GCTCAAAGGATTGGGCACAA+AGG | - | chr4.3:3456418-3456437 | MS.gene55890:CDS | 50.0% | |
| ! | ACAAGGCTATTTGGAGCCAG+GGG | - | chr4.3:3456279-3456298 | MS.gene55890:intron | 50.0% |
| ! | GAACAAGGCTATTTGGAGCC+AGG | - | chr4.3:3456277-3456296 | MS.gene55890:intron | 50.0% |
| !! | GAGGTTGATGGTGTACTCTC+TGG | + | chr4.3:3455581-3455600 | None:intergenic | 50.0% |
| !! | GATCAGAAGTGTCCCTAGGA+GGG | - | chr4.3:3456301-3456320 | MS.gene55890:intron | 50.0% |
| AACCTCCACAAACGCCTCCA+TGG | - | chr4.3:3455595-3455614 | MS.gene55890:CDS | 55.0% | |
| ATGCGAACCCTAACCCTCCT+AGG | + | chr4.3:3456317-3456336 | None:intergenic | 55.0% | |
| CCGCAAGAGGAACGATGATG+AGG | - | chr4.3:3456340-3456359 | MS.gene55890:intron | 55.0% | |
| TAGGGACACTTCTGATCCCC+TGG | + | chr4.3:3456298-3456317 | None:intergenic | 55.0% | |
| TGCGAACCCTAACCCTCCTA+GGG | + | chr4.3:3456316-3456335 | None:intergenic | 55.0% | |
| ! | GAAGTGTCCCTAGGAGGGTT+AGG | - | chr4.3:3456306-3456325 | MS.gene55890:intron | 55.0% |
| ! | GAGGCGTTTGTGGAGGTTGA+TGG | + | chr4.3:3455593-3455612 | None:intergenic | 55.0% |
| !! | AGGGGATCAGAAGTGTCCCT+AGG | - | chr4.3:3456297-3456316 | MS.gene55890:intron | 55.0% |
| !! | GGATCAGAAGTGTCCCTAGG+AGG | - | chr4.3:3456300-3456319 | MS.gene55890:intron | 55.0% |
| TCCACAAACGCCTCCATGGC+TGG | - | chr4.3:3455599-3455618 | MS.gene55890:CDS | 60.0% | |
| !! | ACCAGCCATGGAGGCGTTTG+TGG | + | chr4.3:3455603-3455622 | None:intergenic | 60.0% |
| !! | AGCCATGGAGGCGTTTGTGG+AGG | + | chr4.3:3455600-3455619 | None:intergenic | 60.0% |
| CTCTTCCTTCCTACCGGCGC+CGG | + | chr4.3:3455551-3455570 | None:intergenic | 65.0% | |
| GGGTTCGCATTGCCCGCAAG+AGG | - | chr4.3:3456327-3456346 | MS.gene55890:intron | 65.0% | |
| ! | ATGGTGGAGAAGACCGGCGC+CGG | - | chr4.3:3455535-3455554 | MS.gene55890:CDS | 65.0% |
| !! | CGGCGCCGGTAGGAAGGAAG+AGG | - | chr4.3:3455549-3455568 | MS.gene55890:CDS | 70.0% |
| !! | GAAGACCGGCGCCGGTAGGA+AGG | - | chr4.3:3455543-3455562 | MS.gene55890:CDS | 70.0% |
| !! | TGGAGAAGACCGGCGCCGGT+AGG | - | chr4.3:3455539-3455558 | MS.gene55890:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 3455535 | 3456460 | 3455535 | ID=MS.gene55890 |
| chr4.3 | mRNA | 3455535 | 3456460 | 3455535 | ID=MS.gene55890.t1;Parent=MS.gene55890 |
| chr4.3 | exon | 3456375 | 3456460 | 3456375 | ID=MS.gene55890.t1.exon1;Parent=MS.gene55890.t1 |
| chr4.3 | CDS | 3456375 | 3456460 | 3456375 | ID=cds.MS.gene55890.t1;Parent=MS.gene55890.t1 |
| chr4.3 | exon | 3455535 | 3455814 | 3455535 | ID=MS.gene55890.t1.exon2;Parent=MS.gene55890.t1 |
| chr4.3 | CDS | 3455535 | 3455814 | 3455535 | ID=cds.MS.gene55890.t1;Parent=MS.gene55890.t1 |
| Gene Sequence |
| Protein sequence |
