Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74599.t1 | KEH37012.1 | 94.7 | 914 | 44 | 2 | 1 | 914 | 1 | 910 | 0.00E+00 | 1672.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74599.t1 | C6L7U1 | 30.9 | 530 | 350 | 9 | 379 | 903 | 622 | 1140 | 9.4e-58 | 226.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74599.t1 | A0A072V5B7 | 94.7 | 914 | 44 | 2 | 1 | 914 | 1 | 910 | 0.0e+00 | 1672.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene74599 | 0.872122 | 4.05E-67 | -1.69E-46 |
| MS.gene049151 | MS.gene74599 | 0.856987 | 2.22E-62 | -1.69E-46 |
| MS.gene049153 | MS.gene74599 | 0.876644 | 1.18E-68 | -1.69E-46 |
| MS.gene049233 | MS.gene74599 | 0.812928 | 3.31E-51 | -1.69E-46 |
| MS.gene049260 | MS.gene74599 | 0.829823 | 4.15E-55 | -1.69E-46 |
| MS.gene049378 | MS.gene74599 | 0.800386 | 1.48E-48 | -1.69E-46 |
| MS.gene049389 | MS.gene74599 | 0.80332 | 3.69E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene74599 | 0.857731 | 1.34E-62 | -1.69E-46 |
| MS.gene049910 | MS.gene74599 | 0.836005 | 1.21E-56 | -1.69E-46 |
| MS.gene049915 | MS.gene74599 | 0.816142 | 6.44E-52 | -1.69E-46 |
| MS.gene050128 | MS.gene74599 | 0.800557 | 1.36E-48 | -1.69E-46 |
| MS.gene050226 | MS.gene74599 | 0.837146 | 6.17E-57 | -1.69E-46 |
| MS.gene050227 | MS.gene74599 | 0.839095 | 1.94E-57 | -1.69E-46 |
| MS.gene050228 | MS.gene74599 | 0.826454 | 2.69E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene74599 | 0.843741 | 1.16E-58 | -1.69E-46 |
| MS.gene050330 | MS.gene74599 | -0.815696 | 8.10E-52 | -1.69E-46 |
| MS.gene050558 | MS.gene74599 | 0.846014 | 2.83E-59 | -1.69E-46 |
| MS.gene050560 | MS.gene74599 | 0.809394 | 1.93E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene74599 | -0.811245 | 7.71E-51 | -1.69E-46 |
| MS.gene050642 | MS.gene74599 | 0.804288 | 2.32E-49 | -1.69E-46 |
| MS.gene050787 | MS.gene74599 | 0.809907 | 1.50E-50 | -1.69E-46 |
| MS.gene050820 | MS.gene74599 | 0.820442 | 6.84E-53 | -1.69E-46 |
| MS.gene05119 | MS.gene74599 | -0.827295 | 1.69E-54 | -1.69E-46 |
| MS.gene051663 | MS.gene74599 | 0.814614 | 1.41E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene74599 | 0.870425 | 1.47E-66 | -1.69E-46 |
| MS.gene051983 | MS.gene74599 | 0.838404 | 2.93E-57 | -1.69E-46 |
| MS.gene052077 | MS.gene74599 | 0.802585 | 5.23E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene74599 | 0.823457 | 1.37E-53 | -1.69E-46 |
| MS.gene052253 | MS.gene74599 | 0.814661 | 1.38E-51 | -1.69E-46 |
| MS.gene052255 | MS.gene74599 | 0.815992 | 6.96E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene74599 | 0.837214 | 5.93E-57 | -1.69E-46 |
| MS.gene053559 | MS.gene74599 | 0.816291 | 5.97E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene74599 | 0.87947 | 1.21E-69 | -1.69E-46 |
| MS.gene054379 | MS.gene74599 | 0.805166 | 1.52E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene74599 | 0.845475 | 3.97E-59 | -1.69E-46 |
| MS.gene054542 | MS.gene74599 | 0.825603 | 4.28E-54 | -1.69E-46 |
| MS.gene054833 | MS.gene74599 | 0.802186 | 6.32E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene74599 | 0.872483 | 3.07E-67 | -1.69E-46 |
| MS.gene054983 | MS.gene74599 | 0.813739 | 2.20E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene74599 | 0.802553 | 5.31E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene74599 | 0.832015 | 1.20E-55 | -1.69E-46 |
| MS.gene055428 | MS.gene74599 | 0.813544 | 2.43E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene74599 | 0.805365 | 1.38E-49 | -1.69E-46 |
| MS.gene055859 | MS.gene74599 | 0.816983 | 4.17E-52 | -1.69E-46 |
| MS.gene056447 | MS.gene74599 | 0.805956 | 1.04E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene74599 | 0.804813 | 1.80E-49 | -1.69E-46 |
| MS.gene056875 | MS.gene74599 | 0.850108 | 2.10E-60 | -1.69E-46 |
| MS.gene056979 | MS.gene74599 | 0.832257 | 1.05E-55 | -1.69E-46 |
| MS.gene057121 | MS.gene74599 | 0.833716 | 4.54E-56 | -1.69E-46 |
| MS.gene057448 | MS.gene74599 | 0.840565 | 8.05E-58 | -1.69E-46 |
| MS.gene057449 | MS.gene74599 | 0.827943 | 1.18E-54 | -1.69E-46 |
| MS.gene057450 | MS.gene74599 | 0.83597 | 1.23E-56 | -1.69E-46 |
| MS.gene057469 | MS.gene74599 | 0.849372 | 3.37E-60 | -1.69E-46 |
| MS.gene057750 | MS.gene74599 | 0.837875 | 4.01E-57 | -1.69E-46 |
| MS.gene057754 | MS.gene74599 | 0.805261 | 1.45E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene74599 | 0.871542 | 6.31E-67 | -1.69E-46 |
| MS.gene05811 | MS.gene74599 | 0.848555 | 5.69E-60 | -1.69E-46 |
| MS.gene058142 | MS.gene74599 | 0.837967 | 3.80E-57 | -1.69E-46 |
| MS.gene058710 | MS.gene74599 | 0.824874 | 6.37E-54 | -1.69E-46 |
| MS.gene058833 | MS.gene74599 | 0.856355 | 3.40E-62 | -1.69E-46 |
| MS.gene058845 | MS.gene74599 | 0.812813 | 3.51E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene74599 | 0.803189 | 3.93E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene74599 | 0.828524 | 8.57E-55 | -1.69E-46 |
| MS.gene059128 | MS.gene74599 | 0.830027 | 3.70E-55 | -1.69E-46 |
| MS.gene059285 | MS.gene74599 | 0.832197 | 1.08E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene74599 | 0.82661 | 2.47E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene74599 | 0.870791 | 1.12E-66 | -1.69E-46 |
| MS.gene059894 | MS.gene74599 | 0.823175 | 1.60E-53 | -1.69E-46 |
| MS.gene059899 | MS.gene74599 | 0.851599 | 7.99E-61 | -1.69E-46 |
| MS.gene060480 | MS.gene74599 | 0.812326 | 4.49E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene74599 | 0.806217 | 9.16E-50 | -1.69E-46 |
| MS.gene060986 | MS.gene74599 | 0.804208 | 2.41E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene74599 | 0.825044 | 5.81E-54 | -1.69E-46 |
| MS.gene061071 | MS.gene74599 | 0.831191 | 1.92E-55 | -1.69E-46 |
| MS.gene061114 | MS.gene74599 | -0.813058 | 3.10E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74599.t1 | MTR_2g028940 | 96.044 | 910 | 32 | 2 | 1 | 910 | 1 | 906 | 0.0 | 1791 |
| MS.gene74599.t1 | MTR_2g028940 | 95.624 | 914 | 36 | 2 | 1 | 914 | 1 | 910 | 0.0 | 1663 |
| MS.gene74599.t1 | MTR_2g028940 | 96.122 | 722 | 24 | 2 | 1 | 722 | 1 | 718 | 0.0 | 1418 |
| MS.gene74599.t1 | MTR_4g083620 | 51.119 | 268 | 109 | 5 | 22 | 272 | 58 | 320 | 5.44e-67 | 227 |
| MS.gene74599.t1 | MTR_1g090320 | 31.298 | 524 | 348 | 8 | 383 | 903 | 631 | 1145 | 2.29e-58 | 219 |
| MS.gene74599.t1 | MTR_1g090320 | 23.755 | 261 | 159 | 7 | 66 | 289 | 16 | 273 | 5.57e-14 | 77.0 |
| MS.gene74599.t1 | MTR_1g090320 | 31.298 | 524 | 348 | 8 | 383 | 903 | 629 | 1143 | 2.31e-58 | 219 |
| MS.gene74599.t1 | MTR_1g090320 | 23.755 | 261 | 159 | 7 | 66 | 289 | 14 | 271 | 5.76e-14 | 77.0 |
| MS.gene74599.t1 | MTR_8g103227 | 26.775 | 493 | 335 | 11 | 421 | 903 | 513 | 989 | 7.06e-38 | 154 |
| MS.gene74599.t1 | MTR_7g005940 | 33.437 | 323 | 177 | 10 | 22 | 320 | 157 | 465 | 9.31e-38 | 153 |
| MS.gene74599.t1 | MTR_7g005940 | 30.925 | 346 | 231 | 4 | 573 | 913 | 695 | 1037 | 2.94e-34 | 142 |
| MS.gene74599.t1 | MTR_7g005940 | 33.437 | 323 | 177 | 10 | 22 | 320 | 157 | 465 | 9.89e-38 | 153 |
| MS.gene74599.t1 | MTR_7g005940 | 30.792 | 341 | 228 | 4 | 573 | 908 | 695 | 1032 | 6.59e-34 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 111 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCTTCATCTTAAAATT+TGG | 0.147104 | 2.3:+60513065 | MS.gene74599:CDS |
| TGAATTGATTATATCAATTT+TGG | 0.173331 | 2.3:+60514313 | MS.gene74599:CDS |
| CTTATCTTCTTCCTGATCTT+TGG | 0.195909 | 2.3:+60513023 | MS.gene74599:CDS |
| AGAATTCAAAGAAGAAATTT+TGG | 0.203469 | 2.3:-60512873 | None:intergenic |
| TGGTTGTTCACTTACAAATT+TGG | 0.208382 | 2.3:-60513343 | None:intergenic |
| AGATAAGTTCTAGCCAAATT+TGG | 0.217209 | 2.3:-60513007 | None:intergenic |
| GAGCTTTATTCTTATCAATT+TGG | 0.220682 | 2.3:-60513986 | None:intergenic |
| CACTTACAAATTTGGATTAA+TGG | 0.220839 | 2.3:-60513335 | None:intergenic |
| ATTATTGATGCTTGATCTTA+TGG | 0.225685 | 2.3:+60515119 | MS.gene74599:CDS |
| TTGCTTGAACTCATTGTTCT+TGG | 0.227426 | 2.3:+60514806 | MS.gene74599:CDS |
| TCAATCTCTAATCCCTTTCT+TGG | 0.261025 | 2.3:-60513609 | None:intergenic |
| TTATCTTCTTCCTGATCTTT+GGG | 0.276447 | 2.3:+60513024 | MS.gene74599:CDS |
| GCAAAAGCACTACTCTTATT+AGG | 0.281694 | 2.3:+60515503 | MS.gene74599:CDS |
| AATCTTCTAAGCAAAATTCT+TGG | 0.282998 | 2.3:-60515589 | None:intergenic |
| TCTTAAGAATTTCAAAATCT+TGG | 0.293921 | 2.3:-60514998 | None:intergenic |
| GAAGAAGAAGAAGATCCTTT+TGG | 0.300302 | 2.3:-60512476 | None:intergenic |
| GCAACTAAAGGCCTTTCTTC+TGG | 0.313805 | 2.3:-60515090 | None:intergenic |
| TTGAATTGCTTCACCTTGAT+AGG | 0.315513 | 2.3:+60514870 | MS.gene74599:CDS |
| ATACTTAGAGTGTTGGAATT+TGG | 0.316544 | 2.3:+60514512 | MS.gene74599:CDS |
| TTATAGATGCAGTTCAATTC+AGG | 0.320664 | 2.3:+60513653 | MS.gene74599:CDS |
| ACCAATCACTGCTGTAATAA+TGG | 0.321107 | 2.3:-60512597 | None:intergenic |
| AAAGGAGACAGAAAATCTTT+TGG | 0.323862 | 2.3:+60513951 | MS.gene74599:CDS |
| AGGAAGCTGTAGAAGCTATT+TGG | 0.329138 | 2.3:+60514760 | MS.gene74599:CDS |
| TTTCTTTCAAATGAAGTTCA+TGG | 0.345089 | 2.3:+60513106 | MS.gene74599:CDS |
| ACTGAAAATAGTCCAATCTT+TGG | 0.366042 | 2.3:-60514010 | None:intergenic |
| CAAGTCTTACAACTATTTCA+TGG | 0.367986 | 2.3:+60516392 | MS.gene74599:CDS |
| CTTCTTCATCTCAGTTCAAA+AGG | 0.368201 | 2.3:+60512504 | MS.gene74599:CDS |
| TGTAGTCCAAGGTATCTTAG+AGG | 0.373140 | 2.3:+60514259 | MS.gene74599:CDS |
| GACCTAAAACTTGGCCTTGA+TGG | 0.374047 | 2.3:-60513271 | None:intergenic |
| AACAGATACAAGGCAGTGTT+TGG | 0.375753 | 2.3:+60513528 | MS.gene74599:intron |
| CAAAGCTTGGTTGAACTCTC+CGG | 0.377724 | 2.3:+60514199 | MS.gene74599:CDS |
| CATCAAAACCATTGAGAAGT+TGG | 0.390903 | 2.3:-60514601 | None:intergenic |
| AAACAATGGCTTAAAGTTAG+TGG | 0.392361 | 2.3:+60513214 | MS.gene74599:CDS |
| CTTCTTGATGACCTAAAACT+TGG | 0.393685 | 2.3:-60513280 | None:intergenic |
| ACTAATCTTCGTGACCAAAC+TGG | 0.401461 | 2.3:+60513576 | MS.gene74599:CDS |
| TCCATTATTACAGCAGTGAT+TGG | 0.410010 | 2.3:+60512596 | MS.gene74599:CDS |
| CAATTGTTCCCTTGCCATCA+AGG | 0.425329 | 2.3:+60513257 | MS.gene74599:CDS |
| TTTCTTCATTTACCTTCAAA+AGG | 0.429837 | 2.3:+60515062 | MS.gene74599:CDS |
| CTTTCTTCATATATTTGTAA+TGG | 0.435120 | 2.3:+60512452 | MS.gene74599:CDS |
| GAATAAAGCTCACCAAAGAT+TGG | 0.438679 | 2.3:+60513998 | MS.gene74599:CDS |
| AGATTCAAAGTTACCACAAA+TGG | 0.439280 | 2.3:+60516441 | MS.gene74599:CDS |
| ATTCTCCTGCATAAGAGAAA+TGG | 0.439551 | 2.3:-60515529 | None:intergenic |
| AACAAATGCTCCCAAAGATC+AGG | 0.441719 | 2.3:-60513034 | None:intergenic |
| TCTTCTGACACAAGAGACTT+AGG | 0.442706 | 2.3:-60512554 | None:intergenic |
| TTGGTGTCAAAATTCCAGTT+TGG | 0.444139 | 2.3:-60513590 | None:intergenic |
| AATAATATCATTGCAACTAA+AGG | 0.444863 | 2.3:-60515102 | None:intergenic |
| AACAAATGATATCATCAGAA+TGG | 0.448456 | 2.3:+60514480 | MS.gene74599:CDS |
| CGGAGAGTTCAACCAAGCTT+TGG | 0.449630 | 2.3:-60514198 | None:intergenic |
| TATATTTGTAATGGTCCAAA+AGG | 0.449883 | 2.3:+60512461 | MS.gene74599:CDS |
| CTTGATGGCAAGGGAACAAT+TGG | 0.456206 | 2.3:-60513256 | None:intergenic |
| GCAGTGATTGGTATACTTAG+TGG | 0.460876 | 2.3:+60512608 | MS.gene74599:CDS |
| GCGAATAGCGAATTCGCATT+CGG | 0.466819 | 2.3:-60514168 | None:intergenic |
| AGACTTGCACGTGCTAAACT+TGG | 0.474905 | 2.3:-60516376 | None:intergenic |
| ACAAATGATATCATCAGAAT+GGG | 0.481504 | 2.3:+60514481 | MS.gene74599:CDS |
| TTCGCGTCGTTACCAAAGCT+TGG | 0.483538 | 2.3:+60514186 | MS.gene74599:CDS |
| ACTTTGAATCTTCAAGTAAG+TGG | 0.485354 | 2.3:-60516429 | None:intergenic |
| ATATATGAAGAAAGTGGTTG+TGG | 0.488206 | 2.3:-60512443 | None:intergenic |
| AAGATTGAGAAAGCCATTTG+TGG | 0.489915 | 2.3:-60516454 | None:intergenic |
| GGAGGCCATTTCTCTTATGC+AGG | 0.490703 | 2.3:+60515524 | MS.gene74599:CDS |
| TTATGCAGGAGAATCATTGA+TGG | 0.492867 | 2.3:+60515538 | MS.gene74599:CDS |
| AGGAAGAAGAAGGTGAGAGT+TGG | 0.494821 | 2.3:+60516269 | MS.gene74599:CDS |
| ATAGCTTCTACAGCTTCCTT+CGG | 0.495067 | 2.3:-60514756 | None:intergenic |
| TAAGAAGTACATACCTATCA+AGG | 0.495121 | 2.3:-60514883 | None:intergenic |
| GCCATTGATACTTAGAGTGT+TGG | 0.501193 | 2.3:+60514505 | MS.gene74599:CDS |
| AAAAGGCTCCACCAGAAGAA+AGG | 0.502827 | 2.3:+60515079 | MS.gene74599:CDS |
| TCCAACACTCTAAGTATCAA+TGG | 0.503412 | 2.3:-60514506 | None:intergenic |
| ATAAAACCTCTAAGATACCT+TGG | 0.511591 | 2.3:-60514265 | None:intergenic |
| GGTATACTTAGTGGTTACAT+AGG | 0.515410 | 2.3:+60512617 | MS.gene74599:CDS |
| ATGTAAAATGCTGCCACTTG+AGG | 0.517858 | 2.3:-60514572 | None:intergenic |
| AAAACTTGGCCTTGATGGCA+AGG | 0.520335 | 2.3:-60513266 | None:intergenic |
| ACAACAATTTCCTTGCAAGA+AGG | 0.522900 | 2.3:-60515617 | None:intergenic |
| CTCATGAAAAGAATTGATGA+TGG | 0.523426 | 2.3:+60514680 | MS.gene74599:CDS |
| GCATGTGTCTTGTTCAAAAG+TGG | 0.526161 | 2.3:+60516304 | MS.gene74599:CDS |
| GCAAGACAAGTTCTTTCACT+TGG | 0.527747 | 2.3:+60514644 | MS.gene74599:CDS |
| AGACAAGTTCTTTCACTTGG+TGG | 0.529235 | 2.3:+60514647 | MS.gene74599:CDS |
| TTGATTAAGGAGGAAGAAGA+AGG | 0.532233 | 2.3:+60516259 | MS.gene74599:intron |
| TTCTTCATCTCAGTTCAAAA+GGG | 0.535117 | 2.3:+60512505 | MS.gene74599:CDS |
| TGCTAAACTTGGAATGCCAT+TGG | 0.536248 | 2.3:-60516365 | None:intergenic |
| TTCTTAAGAGGACTCAAAGA+TGG | 0.542035 | 2.3:+60515012 | MS.gene74599:CDS |
| AAAAGAAGAAAAGATTTAGG+AGG | 0.544406 | 2.3:+60512719 | MS.gene74599:CDS |
| TGATGGAGAGATTCATGAGA+AGG | 0.547332 | 2.3:+60514697 | MS.gene74599:CDS |
| AAAGCTTGGTTGAACTCTCC+GGG | 0.547863 | 2.3:+60514200 | MS.gene74599:CDS |
| GCAGGAAGATAAATATCTCA+AGG | 0.551167 | 2.3:+60515394 | MS.gene74599:intron |
| TATTACAACTATATGTTCAT+CGG | 0.551263 | 2.3:+60514136 | MS.gene74599:CDS |
| AGATTCATTTCCTTCTTGCA+AGG | 0.560069 | 2.3:+60515607 | MS.gene74599:CDS |
| TTACAAATATATGAAGAAAG+TGG | 0.563092 | 2.3:-60512449 | None:intergenic |
| GATAAACTGATAGAAGATCA+AGG | 0.564437 | 2.3:+60512794 | MS.gene74599:CDS |
| GTCAATGCTTCTTCAATGAG+AGG | 0.568971 | 2.3:-60514227 | None:intergenic |
| ATATAGAGAAGAAGCTATTG+AGG | 0.570152 | 2.3:+60515424 | MS.gene74599:CDS |
| CTCACAAATAGTTCTAGTTG+TGG | 0.570468 | 2.3:-60514389 | None:intergenic |
| TCATCTCAGTTCAAAAGGGT+AGG | 0.576116 | 2.3:+60512509 | MS.gene74599:CDS |
| TAAGAGGACTCAAAGATGGA+TGG | 0.576526 | 2.3:+60515016 | MS.gene74599:CDS |
| GGCAAGGGAACAATTGGAAG+AGG | 0.578516 | 2.3:-60513250 | None:intergenic |
| TGTGTCAGAAGATTCAAGAA+TGG | 0.580254 | 2.3:+60512565 | MS.gene74599:CDS |
| TTGCTATGTATTATAAACAA+TGG | 0.580498 | 2.3:+60513200 | MS.gene74599:CDS |
| TGATGAGATCTTTGTGAACA+TGG | 0.581215 | 2.3:+60512751 | MS.gene74599:CDS |
| TCGTGTTGCATTCGAGCCGA+AGG | 0.583812 | 2.3:+60514740 | MS.gene74599:CDS |
| CTAGCAAATTCTATAGCCAA+TGG | 0.590561 | 2.3:+60516349 | MS.gene74599:CDS |
| ACTAAAGGCCTTTCTTCTGG+TGG | 0.595306 | 2.3:-60515087 | None:intergenic |
| GGAAAGAAACAAAATTCAAG+TGG | 0.595509 | 2.3:+60514827 | MS.gene74599:CDS |
| TCTTTATCTATCAAAACCAA+TGG | 0.600134 | 2.3:+60514454 | MS.gene74599:CDS |
| ACACAATCTATTGTAGTCCA+AGG | 0.607717 | 2.3:+60514248 | MS.gene74599:CDS |
| TTCAATGATTGTAGCAACTG+TGG | 0.613085 | 2.3:-60516481 | None:intergenic |
| AAACTTGGCCTTGATGGCAA+GGG | 0.616412 | 2.3:-60513265 | None:intergenic |
| AAAGCACTACTCTTATTAGG+AGG | 0.623649 | 2.3:+60515506 | MS.gene74599:CDS |
| TGTTTATGACTCAATTCACA+AGG | 0.624575 | 2.3:+60515637 | MS.gene74599:CDS |
| AGTACAATGTAGTCCTCAAG+TGG | 0.626255 | 2.3:+60514559 | MS.gene74599:CDS |
| TTGAATCTTCAAGTAAGTGG+AGG | 0.627778 | 2.3:-60516426 | None:intergenic |
| CAGGAAGATAAATATCTCAA+GGG | 0.629457 | 2.3:+60515395 | MS.gene74599:intron |
| GGACTCAAAGATGGATGGAG+TGG | 0.630766 | 2.3:+60515021 | MS.gene74599:CDS |
| TCTTCAATGAGAGGATCACC+CGG | 0.650331 | 2.3:-60514218 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAATTTATATATGTTAA+GGG | + | chr2.3:60513690-60513709 | MS.gene74599:intron | 10.0% |
| !!! | TTTAATTATGTTAATCTTTT+TGG | + | chr2.3:60516642-60516661 | MS.gene74599:intron | 10.0% |
| !!! | TTTTTATATTGATATTGTTT+TGG | + | chr2.3:60514958-60514977 | MS.gene74599:intron | 10.0% |
| !! | AATTGCATATATGAAATTAT+TGG | + | chr2.3:60515159-60515178 | MS.gene74599:intron | 15.0% |
| !! | ATTTGTATATCATAAAAAGA+TGG | - | chr2.3:60513366-60513385 | None:intergenic | 15.0% |
| !! | CTTCAAATTTATATATGTTA+AGG | + | chr2.3:60513689-60513708 | MS.gene74599:intron | 15.0% |
| !! | TAAACATCATAACTATAAAT+AGG | + | chr2.3:60516110-60516129 | MS.gene74599:intron | 15.0% |
| !! | TTAAAAAAATTAGACAGATT+TGG | - | chr2.3:60516766-60516785 | None:intergenic | 15.0% |
| !!! | ATTAATTTTAAGTGCTAATA+TGG | - | chr2.3:60516673-60516692 | None:intergenic | 15.0% |
| !!! | TATTATGTGCTTTAAAATTT+TGG | + | chr2.3:60513495-60513514 | MS.gene74599:intron | 15.0% |
| !!! | TGAATTGATTATATCAATTT+TGG | + | chr2.3:60514313-60514332 | MS.gene74599:CDS | 15.0% |
| !!! | TTTTTGTATATGATTGATTA+AGG | + | chr2.3:60516246-60516265 | MS.gene74599:intron | 15.0% |
| !! | AAGCAAAAGAATATATTTAC+CGG | + | chr2.3:60513420-60513439 | MS.gene74599:intron | 20.0% |
| !! | AATAATATCATTGCAACTAA+AGG | - | chr2.3:60515105-60515124 | None:intergenic | 20.0% |
| !! | AGAAAAAGAAGAAAAGATTT+AGG | + | chr2.3:60512716-60512735 | MS.gene74599:CDS | 20.0% |
| !! | ATAGAAATATCCTATACATA+AGG | + | chr2.3:60513873-60513892 | MS.gene74599:intron | 20.0% |
| !! | ATCTTCTTCATCTTAAAATT+TGG | + | chr2.3:60513065-60513084 | MS.gene74599:CDS | 20.0% |
| !! | CAAAGTTTACAATGAAAAAA+TGG | + | chr2.3:60513159-60513178 | MS.gene74599:CDS | 20.0% |
| !! | CCATAATTATCAAACAAAAT+TGG | + | chr2.3:60515736-60515755 | MS.gene74599:intron | 20.0% |
| !! | CTTTCTTCATATATTTGTAA+TGG | + | chr2.3:60512452-60512471 | MS.gene74599:CDS | 20.0% |
| !! | GAGATTGATAAAAAAATGTA+TGG | + | chr2.3:60513624-60513643 | MS.gene74599:CDS | 20.0% |
| !! | TATTACAACTATATGTTCAT+CGG | + | chr2.3:60514136-60514155 | MS.gene74599:CDS | 20.0% |
| !! | TCTTAAGAATTTCAAAATCT+TGG | - | chr2.3:60515001-60515020 | None:intergenic | 20.0% |
| !! | TTACAAATATATGAAGAAAG+TGG | - | chr2.3:60512452-60512471 | None:intergenic | 20.0% |
| !! | TTGCTATGTATTATAAACAA+TGG | + | chr2.3:60513200-60513219 | MS.gene74599:CDS | 20.0% |
| !! | TTGTATCTTACAAAAAATTC+AGG | + | chr2.3:60516550-60516569 | MS.gene74599:CDS | 20.0% |
| !!! | AAGATTTTGAAATTCTTAAG+AGG | + | chr2.3:60515000-60515019 | MS.gene74599:CDS | 20.0% |
| !!! | AGAATTCAAAGAAGAAATTT+TGG | - | chr2.3:60512876-60512895 | None:intergenic | 20.0% |
| !!! | CCAATTTTGTTTGATAATTA+TGG | - | chr2.3:60515739-60515758 | None:intergenic | 20.0% |
| !!! | TTACCATTTTACAAATATCT+CGG | + | chr2.3:60515792-60515811 | MS.gene74599:intron | 20.0% |
| ! | AAAAGAAGAAAAGATTTAGG+AGG | + | chr2.3:60512719-60512738 | MS.gene74599:CDS | 25.0% |
| ! | AACAAATGATATCATCAGAA+TGG | + | chr2.3:60514480-60514499 | MS.gene74599:CDS | 25.0% |
| ! | AATCTTCTAAGCAAAATTCT+TGG | - | chr2.3:60515592-60515611 | None:intergenic | 25.0% |
| ! | ACAAATGATATCATCAGAAT+GGG | + | chr2.3:60514481-60514500 | MS.gene74599:CDS | 25.0% |
| ! | ACAATGAAAAAATGGATAGT+GGG | + | chr2.3:60513167-60513186 | MS.gene74599:CDS | 25.0% |
| ! | ACAGATAAGTAAATCCAAAT+AGG | - | chr2.3:60513716-60513735 | None:intergenic | 25.0% |
| ! | ATTATTGATGCTTGATCTTA+TGG | + | chr2.3:60515119-60515138 | MS.gene74599:CDS | 25.0% |
| ! | ATTTCAATTATGTAAGTCGA+GGG | + | chr2.3:60515930-60515949 | MS.gene74599:intron | 25.0% |
| ! | CACTTACAAATTTGGATTAA+TGG | - | chr2.3:60513338-60513357 | None:intergenic | 25.0% |
| ! | CTAGTACAAAAGTTAAAGTT+TGG | - | chr2.3:60516816-60516835 | None:intergenic | 25.0% |
| ! | GTATATAAGTCCTTATGTAT+AGG | - | chr2.3:60513886-60513905 | None:intergenic | 25.0% |
| ! | TAACATTTGCCTATAAATGT+AGG | - | chr2.3:60515246-60515265 | None:intergenic | 25.0% |
| ! | TACAATGAAAAAATGGATAG+TGG | + | chr2.3:60513166-60513185 | MS.gene74599:CDS | 25.0% |
| ! | TATATTTGTAATGGTCCAAA+AGG | + | chr2.3:60512461-60512480 | MS.gene74599:CDS | 25.0% |
| ! | TATTTCAATTATGTAAGTCG+AGG | + | chr2.3:60515929-60515948 | MS.gene74599:intron | 25.0% |
| ! | TCTTTATCTATCAAAACCAA+TGG | + | chr2.3:60514454-60514473 | MS.gene74599:CDS | 25.0% |
| ! | TTGTATATGATTGATTAAGG+AGG | + | chr2.3:60516249-60516268 | MS.gene74599:intron | 25.0% |
| ! | TTTCTTCATTTACCTTCAAA+AGG | + | chr2.3:60515062-60515081 | MS.gene74599:CDS | 25.0% |
| ! | TTTCTTTCAAATGAAGTTCA+TGG | + | chr2.3:60513106-60513125 | MS.gene74599:CDS | 25.0% |
| !! | ACTTTTGTACTAGAAATTTG+TGG | + | chr2.3:60516823-60516842 | MS.gene74599:intron | 25.0% |
| !! | TTTAGAACTCCTACATTTAT+AGG | + | chr2.3:60515234-60515253 | MS.gene74599:intron | 25.0% |
| !! | TTTATTTCTTTAAGTCTACG+AGG | - | chr2.3:60515877-60515896 | None:intergenic | 25.0% |
| !! | TTTTGGCAGAATTAATAACA+AGG | + | chr2.3:60514330-60514349 | MS.gene74599:CDS | 25.0% |
| !!! | AATATAGTTGACTTTTGACA+TGG | - | chr2.3:60514066-60514085 | None:intergenic | 25.0% |
| !!! | AGAGAAATGCAATTCTTTTT+TGG | + | chr2.3:60512679-60512698 | MS.gene74599:CDS | 25.0% |
| !!! | ATAATTTTCGAGTGCTATAA+AGG | - | chr2.3:60516218-60516237 | None:intergenic | 25.0% |
| !!! | ATTTTAAGATGAAGAAGATG+AGG | - | chr2.3:60513064-60513083 | None:intergenic | 25.0% |
| !!! | GAGCTTTATTCTTATCAATT+TGG | - | chr2.3:60513989-60514008 | None:intergenic | 25.0% |
| !!! | GTTTTGTTATTCTCCAAATT+TGG | + | chr2.3:60512994-60513013 | MS.gene74599:CDS | 25.0% |
| !!! | TAATTTTCGAGTGCTATAAA+GGG | - | chr2.3:60516217-60516236 | None:intergenic | 25.0% |
| !!! | TTTTTTTCCTTGTAAGAAAG+TGG | + | chr2.3:60516728-60516747 | MS.gene74599:intron | 25.0% |
| !!! | TTTTTTTTGCAACAGATACA+AGG | + | chr2.3:60513518-60513537 | MS.gene74599:intron | 25.0% |
| AAACAATGGCTTAAAGTTAG+TGG | + | chr2.3:60513214-60513233 | MS.gene74599:CDS | 30.0% | |
| AATCAAGAACTAATGTGACT+TGG | + | chr2.3:60516700-60516719 | MS.gene74599:intron | 30.0% | |
| ACAAAAGTTAAAGTTTGGCA+TGG | - | chr2.3:60516811-60516830 | None:intergenic | 30.0% | |
| ACAACTTATAGACATGTCAT+AGG | - | chr2.3:60513761-60513780 | None:intergenic | 30.0% | |
| ACTGAAAATAGTCCAATCTT+TGG | - | chr2.3:60514013-60514032 | None:intergenic | 30.0% | |
| ACTTTGAATCTTCAAGTAAG+TGG | - | chr2.3:60516432-60516451 | None:intergenic | 30.0% | |
| AGATTCAAAGTTACCACAAA+TGG | + | chr2.3:60516441-60516460 | MS.gene74599:CDS | 30.0% | |
| ATATAGAGAAGAAGCTATTG+AGG | + | chr2.3:60515424-60515443 | MS.gene74599:CDS | 30.0% | |
| ATATATGAAGAAAGTGGTTG+TGG | - | chr2.3:60512446-60512465 | None:intergenic | 30.0% | |
| ATATATGTTAAGGGCCTATT+TGG | + | chr2.3:60513699-60513718 | MS.gene74599:intron | 30.0% | |
| CAAGTCTTACAACTATTTCA+TGG | + | chr2.3:60516392-60516411 | MS.gene74599:CDS | 30.0% | |
| CAGGAAGATAAATATCTCAA+GGG | + | chr2.3:60515395-60515414 | MS.gene74599:intron | 30.0% | |
| CTCATGAAAAGAATTGATGA+TGG | + | chr2.3:60514680-60514699 | MS.gene74599:CDS | 30.0% | |
| GATAAACTGATAGAAGATCA+AGG | + | chr2.3:60512794-60512813 | MS.gene74599:CDS | 30.0% | |
| GGAAAGAAACAAAATTCAAG+TGG | + | chr2.3:60514827-60514846 | MS.gene74599:CDS | 30.0% | |
| GGCAAATGTTAATAAGTTAG+TGG | + | chr2.3:60515255-60515274 | MS.gene74599:intron | 30.0% | |
| TAAAGAGTTTCAAACATGAC+CGG | - | chr2.3:60515315-60515334 | None:intergenic | 30.0% | |
| TCAATTCACAAGGTATGATT+TGG | + | chr2.3:60515647-60515666 | MS.gene74599:intron | 30.0% | |
| TGGTTGTTCACTTACAAATT+TGG | - | chr2.3:60513346-60513365 | None:intergenic | 30.0% | |
| TGTTTATGACTCAATTCACA+AGG | + | chr2.3:60515637-60515656 | MS.gene74599:CDS | 30.0% | |
| TTATAGATGCAGTTCAATTC+AGG | + | chr2.3:60513653-60513672 | MS.gene74599:CDS | 30.0% | |
| TTATCTTCTTCCTGATCTTT+GGG | + | chr2.3:60513024-60513043 | MS.gene74599:CDS | 30.0% | |
| TTCTTCATCTCAGTTCAAAA+GGG | + | chr2.3:60512505-60512524 | MS.gene74599:CDS | 30.0% | |
| ! | AAAAGTACATGTATCTTGTC+CGG | - | chr2.3:60513442-60513461 | None:intergenic | 30.0% |
| ! | AAAGGAGACAGAAAATCTTT+TGG | + | chr2.3:60513951-60513970 | MS.gene74599:CDS | 30.0% |
| ! | ACCTTGTTATCTCAAAAACA+GGG | - | chr2.3:60515830-60515849 | None:intergenic | 30.0% |
| ! | AGATAAGTTCTAGCCAAATT+TGG | - | chr2.3:60513010-60513029 | None:intergenic | 30.0% |
| ! | AGTGGTTATGTTAGTTTCTA+GGG | + | chr2.3:60515273-60515292 | MS.gene74599:intron | 30.0% |
| ! | TAAGAAGTACATACCTATCA+AGG | - | chr2.3:60514886-60514905 | None:intergenic | 30.0% |
| ! | TAGTGGTTATGTTAGTTTCT+AGG | + | chr2.3:60515272-60515291 | MS.gene74599:intron | 30.0% |
| !! | AATTTGCTTTTGCAAAAAGC+TGG | + | chr2.3:60515563-60515582 | MS.gene74599:CDS | 30.0% |
| !! | ATAAAACCTCTAAGATACCT+TGG | - | chr2.3:60514268-60514287 | None:intergenic | 30.0% |
| !! | ATACTTAGAGTGTTGGAATT+TGG | + | chr2.3:60514512-60514531 | MS.gene74599:CDS | 30.0% |
| !! | TTATGTTAGTTTCTAGGGTT+CGG | + | chr2.3:60515278-60515297 | MS.gene74599:intron | 30.0% |
| !!! | AAGCACTAGTCTTTTTCTTA+AGG | + | chr2.3:60514421-60514440 | MS.gene74599:CDS | 30.0% |
| !!! | GATATCATTTGTTTTGCCAT+TGG | - | chr2.3:60514473-60514492 | None:intergenic | 30.0% |
| AAGATTGAGAAAGCCATTTG+TGG | - | chr2.3:60516457-60516476 | None:intergenic | 35.0% | |
| ACAACAATTTCCTTGCAAGA+AGG | - | chr2.3:60515620-60515639 | None:intergenic | 35.0% | |
| ACACAATCTATTGTAGTCCA+AGG | + | chr2.3:60514248-60514267 | MS.gene74599:CDS | 35.0% | |
| ACCAATCACTGCTGTAATAA+TGG | - | chr2.3:60512600-60512619 | None:intergenic | 35.0% | |
| AGATTCATTTCCTTCTTGCA+AGG | + | chr2.3:60515607-60515626 | MS.gene74599:CDS | 35.0% | |
| ATTCTCCTGCATAAGAGAAA+TGG | - | chr2.3:60515532-60515551 | None:intergenic | 35.0% | |
| CATCAAAACCATTGAGAAGT+TGG | - | chr2.3:60514604-60514623 | None:intergenic | 35.0% | |
| CGTCCGAGATATTTGTAAAA+TGG | - | chr2.3:60515798-60515817 | None:intergenic | 35.0% | |
| CTAGCAAATTCTATAGCCAA+TGG | + | chr2.3:60516349-60516368 | MS.gene74599:CDS | 35.0% | |
| CTTATCTTCTTCCTGATCTT+TGG | + | chr2.3:60513023-60513042 | MS.gene74599:CDS | 35.0% | |
| CTTCTTCATCTCAGTTCAAA+AGG | + | chr2.3:60512504-60512523 | MS.gene74599:CDS | 35.0% | |
| GAATAAAGCTCACCAAAGAT+TGG | + | chr2.3:60513998-60514017 | MS.gene74599:CDS | 35.0% | |
| GCAGGAAGATAAATATCTCA+AGG | + | chr2.3:60515394-60515413 | MS.gene74599:intron | 35.0% | |
| GGTATACTTAGTGGTTACAT+AGG | + | chr2.3:60512617-60512636 | MS.gene74599:CDS | 35.0% | |
| TCAATCTCTAATCCCTTTCT+TGG | - | chr2.3:60513612-60513631 | None:intergenic | 35.0% | |
| TCCAACACTCTAAGTATCAA+TGG | - | chr2.3:60514509-60514528 | None:intergenic | 35.0% | |
| TCCATTATTACAGCAGTGAT+TGG | + | chr2.3:60512596-60512615 | MS.gene74599:CDS | 35.0% | |
| TCTAATCTCCTTTCTCACTT+TGG | + | chr2.3:60513924-60513943 | MS.gene74599:intron | 35.0% | |
| TGATGAGATCTTTGTGAACA+TGG | + | chr2.3:60512751-60512770 | MS.gene74599:CDS | 35.0% | |
| TGCTTATATTTCGTTCCAGA+GGG | - | chr2.3:60513405-60513424 | None:intergenic | 35.0% | |
| TGTAAGAAAGTGGCAATTTG+AGG | + | chr2.3:60516738-60516757 | MS.gene74599:intron | 35.0% | |
| TGTGTCAGAAGATTCAAGAA+TGG | + | chr2.3:60512565-60512584 | MS.gene74599:CDS | 35.0% | |
| TTATGCAGGAGAATCATTGA+TGG | + | chr2.3:60515538-60515557 | MS.gene74599:CDS | 35.0% | |
| TTCAATGATTGTAGCAACTG+TGG | - | chr2.3:60516484-60516503 | None:intergenic | 35.0% | |
| TTCTTAAGAGGACTCAAAGA+TGG | + | chr2.3:60515012-60515031 | MS.gene74599:CDS | 35.0% | |
| TTGAATCTTCAAGTAAGTGG+AGG | - | chr2.3:60516429-60516448 | None:intergenic | 35.0% | |
| TTGAATTGCTTCACCTTGAT+AGG | + | chr2.3:60514870-60514889 | MS.gene74599:CDS | 35.0% | |
| TTGATTAAGGAGGAAGAAGA+AGG | + | chr2.3:60516259-60516278 | MS.gene74599:intron | 35.0% | |
| TTGCTTATATTTCGTTCCAG+AGG | - | chr2.3:60513406-60513425 | None:intergenic | 35.0% | |
| TTGCTTGAACTCATTGTTCT+TGG | + | chr2.3:60514806-60514825 | MS.gene74599:CDS | 35.0% | |
| ! | AAAGCACTACTCTTATTAGG+AGG | + | chr2.3:60515506-60515525 | MS.gene74599:CDS | 35.0% |
| ! | ACTTTTGACATGGTTTCTGT+TGG | - | chr2.3:60514056-60514075 | None:intergenic | 35.0% |
| ! | AGTGGCAGCATTTTACATTT+TGG | + | chr2.3:60514577-60514596 | MS.gene74599:CDS | 35.0% |
| ! | ATTTTGGACCAACTTCTCAA+TGG | + | chr2.3:60514593-60514612 | MS.gene74599:CDS | 35.0% |
| ! | CTTCTTGATGACCTAAAACT+TGG | - | chr2.3:60513283-60513302 | None:intergenic | 35.0% |
| ! | GAAGAAGAAGAAGATCCTTT+TGG | - | chr2.3:60512479-60512498 | None:intergenic | 35.0% |
| ! | GACCTTGTTATCTCAAAAAC+AGG | - | chr2.3:60515831-60515850 | None:intergenic | 35.0% |
| ! | TATCTGTTTGTCAGAGCTTT+TGG | + | chr2.3:60513729-60513748 | MS.gene74599:intron | 35.0% |
| !! | ATTTTTGCTGCTCTTGTTTG+AGG | - | chr2.3:60513554-60513573 | None:intergenic | 35.0% |
| !! | CAAATTGCCACTTTCTTACA+AGG | - | chr2.3:60516738-60516757 | None:intergenic | 35.0% |
| !! | CTCACAAATAGTTCTAGTTG+TGG | - | chr2.3:60514392-60514411 | None:intergenic | 35.0% |
| !! | GCAAAAGCACTACTCTTATT+AGG | + | chr2.3:60515503-60515522 | MS.gene74599:CDS | 35.0% |
| !! | GGAATTTTGACACCAAGAAA+GGG | + | chr2.3:60513597-60513616 | MS.gene74599:CDS | 35.0% |
| !! | TGGAATTTTGACACCAAGAA+AGG | + | chr2.3:60513596-60513615 | MS.gene74599:CDS | 35.0% |
| !! | TTGGTGTCAAAATTCCAGTT+TGG | - | chr2.3:60513593-60513612 | None:intergenic | 35.0% |
| !!! | ACCCTGTTTTTGAGATAACA+AGG | + | chr2.3:60515826-60515845 | MS.gene74599:intron | 35.0% |
| AACAAATGCTCCCAAAGATC+AGG | - | chr2.3:60513037-60513056 | None:intergenic | 40.0% | |
| AACAGATACAAGGCAGTGTT+TGG | + | chr2.3:60513528-60513547 | MS.gene74599:intron | 40.0% | |
| AAGGTGAGAGTTGGCAAAAA+AGG | + | chr2.3:60516278-60516297 | MS.gene74599:CDS | 40.0% | |
| ACTAATCTTCGTGACCAAAC+TGG | + | chr2.3:60513576-60513595 | MS.gene74599:CDS | 40.0% | |
| AGACAAGTTCTTTCACTTGG+TGG | + | chr2.3:60514647-60514666 | MS.gene74599:CDS | 40.0% | |
| AGGAAGCTGTAGAAGCTATT+TGG | + | chr2.3:60514760-60514779 | MS.gene74599:CDS | 40.0% | |
| AGGTGAGAGTTGGCAAAAAA+GGG | + | chr2.3:60516279-60516298 | MS.gene74599:CDS | 40.0% | |
| AGTACAATGTAGTCCTCAAG+TGG | + | chr2.3:60514559-60514578 | MS.gene74599:CDS | 40.0% | |
| ATAGCTTCTACAGCTTCCTT+CGG | - | chr2.3:60514759-60514778 | None:intergenic | 40.0% | |
| CTTTCTCACTTTGGACAGAA+AGG | + | chr2.3:60513933-60513952 | MS.gene74599:intron | 40.0% | |
| CTTTCTGTCCAAAGTGAGAA+AGG | - | chr2.3:60513935-60513954 | None:intergenic | 40.0% | |
| GAGTTCTCAAGTTAAGTCTC+GGG | - | chr2.3:60516000-60516019 | None:intergenic | 40.0% | |
| GCAAGACAAGTTCTTTCACT+TGG | + | chr2.3:60514644-60514663 | MS.gene74599:CDS | 40.0% | |
| GCAGTGATTGGTATACTTAG+TGG | + | chr2.3:60512608-60512627 | MS.gene74599:CDS | 40.0% | |
| GCCATTGATACTTAGAGTGT+TGG | + | chr2.3:60514505-60514524 | MS.gene74599:CDS | 40.0% | |
| GGAGTTCTCAAGTTAAGTCT+CGG | - | chr2.3:60516001-60516020 | None:intergenic | 40.0% | |
| GTCAATGCTTCTTCAATGAG+AGG | - | chr2.3:60514230-60514249 | None:intergenic | 40.0% | |
| TAAGAGGACTCAAAGATGGA+TGG | + | chr2.3:60515016-60515035 | MS.gene74599:CDS | 40.0% | |
| TCATCTCAGTTCAAAAGGGT+AGG | + | chr2.3:60512509-60512528 | MS.gene74599:CDS | 40.0% | |
| TCTTCTGACACAAGAGACTT+AGG | - | chr2.3:60512557-60512576 | None:intergenic | 40.0% | |
| TGATGGAGAGATTCATGAGA+AGG | + | chr2.3:60514697-60514716 | MS.gene74599:CDS | 40.0% | |
| TGCTAAACTTGGAATGCCAT+TGG | - | chr2.3:60516368-60516387 | None:intergenic | 40.0% | |
| TGTGTATATAGTACTCCCTC+TGG | + | chr2.3:60513387-60513406 | MS.gene74599:intron | 40.0% | |
| ! | ATGTAAAATGCTGCCACTTG+AGG | - | chr2.3:60514575-60514594 | None:intergenic | 40.0% |
| ! | ATTTTCAGTGCTTGTCTTGC+AGG | + | chr2.3:60514024-60514043 | MS.gene74599:CDS | 40.0% |
| ! | GCATGTGTCTTGTTCAAAAG+TGG | + | chr2.3:60516304-60516323 | MS.gene74599:CDS | 40.0% |
| ! | TGTAGTCCAAGGTATCTTAG+AGG | + | chr2.3:60514259-60514278 | MS.gene74599:CDS | 40.0% |
| AAAAGGCTCCACCAGAAGAA+AGG | + | chr2.3:60515079-60515098 | MS.gene74599:CDS | 45.0% | |
| AAAGCTTGGTTGAACTCTCC+GGG | + | chr2.3:60514200-60514219 | MS.gene74599:CDS | 45.0% | |
| ACTAAAGGCCTTTCTTCTGG+TGG | - | chr2.3:60515090-60515109 | None:intergenic | 45.0% | |
| AGACTTGCACGTGCTAAACT+TGG | - | chr2.3:60516379-60516398 | None:intergenic | 45.0% | |
| AGAGTTTCAAACATGACCGG+AGG | - | chr2.3:60515312-60515331 | None:intergenic | 45.0% | |
| AGGAAGAAGAAGGTGAGAGT+TGG | + | chr2.3:60516269-60516288 | MS.gene74599:CDS | 45.0% | |
| CAAACATGACCGGAGGTTTA+GGG | - | chr2.3:60515305-60515324 | None:intergenic | 45.0% | |
| CAAAGCTTGGTTGAACTCTC+CGG | + | chr2.3:60514199-60514218 | MS.gene74599:CDS | 45.0% | |
| CAATTGTTCCCTTGCCATCA+AGG | + | chr2.3:60513257-60513276 | MS.gene74599:CDS | 45.0% | |
| GAAAATCCTACCAAGTAGCG+AGG | - | chr2.3:60516022-60516041 | None:intergenic | 45.0% | |
| GCAACTAAAGGCCTTTCTTC+TGG | - | chr2.3:60515093-60515112 | None:intergenic | 45.0% | |
| GCGAATAGCGAATTCGCATT+CGG | - | chr2.3:60514171-60514190 | None:intergenic | 45.0% | |
| TCAAACATGACCGGAGGTTT+AGG | - | chr2.3:60515306-60515325 | None:intergenic | 45.0% | |
| TCTTCAATGAGAGGATCACC+CGG | - | chr2.3:60514221-60514240 | None:intergenic | 45.0% | |
| TGCAATAGCAGATGTGTTGC+AGG | + | chr2.3:60515376-60515395 | MS.gene74599:intron | 45.0% | |
| ! | CTTGATGGCAAGGGAACAAT+TGG | - | chr2.3:60513259-60513278 | None:intergenic | 45.0% |
| ! | TGCCATCAAGGCCAAGTTTT+AGG | + | chr2.3:60513269-60513288 | MS.gene74599:CDS | 45.0% |
| !! | AAAACTTGGCCTTGATGGCA+AGG | - | chr2.3:60513269-60513288 | None:intergenic | 45.0% |
| !! | AAACTTGGCCTTGATGGCAA+GGG | - | chr2.3:60513268-60513287 | None:intergenic | 45.0% |
| !! | GACCTAAAACTTGGCCTTGA+TGG | - | chr2.3:60513274-60513293 | None:intergenic | 45.0% |
| AGAACTCCTCGCTACTTGGT+AGG | + | chr2.3:60516013-60516032 | MS.gene74599:intron | 50.0% | |
| CGGAGAGTTCAACCAAGCTT+TGG | - | chr2.3:60514201-60514220 | None:intergenic | 50.0% | |
| CTTGAGAACTCCTCGCTACT+TGG | + | chr2.3:60516009-60516028 | MS.gene74599:intron | 50.0% | |
| GGACTCAAAGATGGATGGAG+TGG | + | chr2.3:60515021-60515040 | MS.gene74599:CDS | 50.0% | |
| GGAGGCCATTTCTCTTATGC+AGG | + | chr2.3:60515524-60515543 | MS.gene74599:CDS | 50.0% | |
| GGCAAGGGAACAATTGGAAG+AGG | - | chr2.3:60513253-60513272 | None:intergenic | 50.0% | |
| TTCGCGTCGTTACCAAAGCT+TGG | + | chr2.3:60514186-60514205 | MS.gene74599:CDS | 50.0% | |
| ! | CTTCTGGTGGAGCCTTTTGA+AGG | - | chr2.3:60515077-60515096 | None:intergenic | 50.0% |
| TCGTGTTGCATTCGAGCCGA+AGG | + | chr2.3:60514740-60514759 | MS.gene74599:CDS | 55.0% | |
| GGGTTCGGACCCTAAACCTC+CGG | + | chr2.3:60515293-60515312 | MS.gene74599:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 60512416 | 60516874 | 60512416 | ID=MS.gene74599 |
| chr2.3 | mRNA | 60512416 | 60516874 | 60512416 | ID=MS.gene74599.t1;Parent=MS.gene74599 |
| chr2.3 | exon | 60512416 | 60513350 | 60512416 | ID=MS.gene74599.t1.exon1;Parent=MS.gene74599.t1 |
| chr2.3 | CDS | 60512416 | 60513350 | 60512416 | ID=cds.MS.gene74599.t1;Parent=MS.gene74599.t1 |
| chr2.3 | exon | 60513533 | 60513674 | 60513533 | ID=MS.gene74599.t1.exon2;Parent=MS.gene74599.t1 |
| chr2.3 | CDS | 60513533 | 60513674 | 60513533 | ID=cds.MS.gene74599.t1;Parent=MS.gene74599.t1 |
| chr2.3 | exon | 60513951 | 60514891 | 60513951 | ID=MS.gene74599.t1.exon3;Parent=MS.gene74599.t1 |
| chr2.3 | CDS | 60513951 | 60514891 | 60513951 | ID=cds.MS.gene74599.t1;Parent=MS.gene74599.t1 |
| chr2.3 | exon | 60514993 | 60515140 | 60514993 | ID=MS.gene74599.t1.exon4;Parent=MS.gene74599.t1 |
| chr2.3 | CDS | 60514993 | 60515140 | 60514993 | ID=cds.MS.gene74599.t1;Parent=MS.gene74599.t1 |
| chr2.3 | exon | 60515398 | 60515658 | 60515398 | ID=MS.gene74599.t1.exon5;Parent=MS.gene74599.t1 |
| chr2.3 | CDS | 60515398 | 60515658 | 60515398 | ID=cds.MS.gene74599.t1;Parent=MS.gene74599.t1 |
| chr2.3 | exon | 60516268 | 60516571 | 60516268 | ID=MS.gene74599.t1.exon6;Parent=MS.gene74599.t1 |
| chr2.3 | CDS | 60516268 | 60516571 | 60516268 | ID=cds.MS.gene74599.t1;Parent=MS.gene74599.t1 |
| chr2.3 | exon | 60516852 | 60516874 | 60516852 | ID=MS.gene74599.t1.exon7;Parent=MS.gene74599.t1 |
| chr2.3 | CDS | 60516852 | 60516874 | 60516852 | ID=cds.MS.gene74599.t1;Parent=MS.gene74599.t1 |
| Gene Sequence |
| Protein sequence |
