AlfalfaGEDB | MS.gene59903

M. sativa cultivar XinJiangDaYe / MS.gene59903

KEGG: -
GO: GO:0005575 GO:0016020 GO:0110165
PFAM: PF01061.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59903.t1	XP_003609200.2	99.3	137	1	0	1	137	1245	1381	4.00E-73	283.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59903.t1	Q8GU87	71.8	124	35	0	1	124	1252	1375	9.1e-50	197.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59903.t1	G7JU55	99.3	137	1	0	1	137	1245	1381	2.9e-73	283.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049150	MS.gene59903	0.804578	2.02E-49	-1.69E-46
MS.gene049260	MS.gene59903	0.859704	3.44E-63	-1.69E-46
MS.gene049351	MS.gene59903	0.805494	1.30E-49	-1.69E-46
MS.gene049491	MS.gene59903	0.801249	9.84E-49	-1.69E-46
MS.gene049758	MS.gene59903	0.859605	3.68E-63	-1.69E-46
MS.gene050128	MS.gene59903	0.810183	1.31E-50	-1.69E-46
MS.gene050301	MS.gene59903	0.857002	2.20E-62	-1.69E-46
MS.gene050319	MS.gene59903	-0.801445	8.98E-49	-1.69E-46
MS.gene050438	MS.gene59903	0.808146	3.57E-50	-1.69E-46
MS.gene050516	MS.gene59903	0.845151	4.86E-59	-1.69E-46
MS.gene050558	MS.gene59903	0.831106	2.01E-55	-1.69E-46
MS.gene050560	MS.gene59903	0.829932	3.90E-55	-1.69E-46
MS.gene050586	MS.gene59903	0.819065	1.41E-52	-1.69E-46
MS.gene050787	MS.gene59903	0.844952	5.50E-59	-1.69E-46
MS.gene050959	MS.gene59903	0.820288	7.42E-53	-1.69E-46
MS.gene05101	MS.gene59903	0.807094	5.98E-50	-1.69E-46
MS.gene051487	MS.gene59903	0.827697	1.36E-54	-1.69E-46
MS.gene051663	MS.gene59903	0.828106	1.08E-54	-1.69E-46
MS.gene051860	MS.gene59903	0.857493	1.57E-62	-1.69E-46
MS.gene052078	MS.gene59903	0.802721	4.91E-49	-1.69E-46
MS.gene052178	MS.gene59903	0.812324	4.49E-51	-1.69E-46
MS.gene052207	MS.gene59903	0.886293	3.88E-72	-1.69E-46
MS.gene052287	MS.gene59903	0.853935	1.72E-61	-1.69E-46
MS.gene052665	MS.gene59903	0.805824	1.11E-49	-1.69E-46
MS.gene053630	MS.gene59903	0.801649	8.15E-49	-1.69E-46
MS.gene053836	MS.gene59903	0.874923	4.62E-68	-1.69E-46
MS.gene054010	MS.gene59903	0.802881	4.55E-49	-1.69E-46
MS.gene054011	MS.gene59903	0.820622	6.22E-53	-1.69E-46
MS.gene054012	MS.gene59903	0.815581	8.59E-52	-1.69E-46
MS.gene054013	MS.gene59903	0.810235	1.28E-50	-1.69E-46
MS.gene054184	MS.gene59903	0.801763	7.72E-49	-1.69E-46
MS.gene054185	MS.gene59903	0.803173	3.96E-49	-1.69E-46
MS.gene054473	MS.gene59903	0.862642	4.38E-64	-1.69E-46
MS.gene054833	MS.gene59903	0.829313	5.52E-55	-1.69E-46
MS.gene055277	MS.gene59903	0.842994	1.84E-58	-1.69E-46
MS.gene055303	MS.gene59903	0.837373	5.40E-57	-1.69E-46
MS.gene055358	MS.gene59903	0.809191	2.14E-50	-1.69E-46
MS.gene055390	MS.gene59903	0.8468	1.73E-59	-1.69E-46
MS.gene055422	MS.gene59903	0.8498	2.56E-60	-1.69E-46
MS.gene055428	MS.gene59903	0.834386	3.09E-56	-1.69E-46
MS.gene055604	MS.gene59903	0.850995	1.18E-60	-1.69E-46
MS.gene056069	MS.gene59903	-0.809966	1.46E-50	-1.69E-46
MS.gene056191	MS.gene59903	0.808133	3.60E-50	-1.69E-46
MS.gene056875	MS.gene59903	0.817298	3.55E-52	-1.69E-46
MS.gene056902	MS.gene59903	0.8159	7.29E-52	-1.69E-46
MS.gene056931	MS.gene59903	0.912213	2.52E-83	-1.69E-46
MS.gene056933	MS.gene59903	0.910595	1.57E-82	-1.69E-46
MS.gene056935	MS.gene59903	0.903596	2.94E-79	-1.69E-46
MS.gene057121	MS.gene59903	0.834619	2.70E-56	-1.69E-46
MS.gene057245	MS.gene59903	0.815967	7.05E-52	-1.69E-46
MS.gene057260	MS.gene59903	0.810497	1.12E-50	-1.69E-46
MS.gene057439	MS.gene59903	0.817844	2.67E-52	-1.69E-46
MS.gene057469	MS.gene59903	0.87823	3.32E-69	-1.69E-46
MS.gene058002	MS.gene59903	0.840636	7.72E-58	-1.69E-46
MS.gene05811	MS.gene59903	0.859397	4.25E-63	-1.69E-46
MS.gene058484	MS.gene59903	0.831771	1.38E-55	-1.69E-46
MS.gene058660	MS.gene59903	0.810926	9.04E-51	-1.69E-46
MS.gene05907	MS.gene59903	0.824545	7.61E-54	-1.69E-46
MS.gene059518	MS.gene59903	0.844852	5.85E-59	-1.69E-46
MS.gene059597	MS.gene59903	0.8124	4.32E-51	-1.69E-46
MS.gene05984	MS.gene59903	0.84937	3.38E-60	-1.69E-46
MS.gene06037	MS.gene59903	0.818405	1.99E-52	-1.69E-46
MS.gene060404	MS.gene59903	0.800707	1.27E-48	-1.69E-46
MS.gene060476	MS.gene59903	0.805278	1.44E-49	-1.69E-46
MS.gene060480	MS.gene59903	0.806023	1.01E-49	-1.69E-46
MS.gene060559	MS.gene59903	0.925157	2.68E-90	-1.69E-46
MS.gene061049	MS.gene59903	0.817355	3.44E-52	-1.69E-46
MS.gene061071	MS.gene59903	0.871978	4.53E-67	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59903.t1	MTR_4g113070	99.270	137	1	0	1	137	1245	1381	6.36e-92	290
MS.gene59903.t1	MTR_2g102660	62.205	127	48	0	1	127	1256	1382	3.80e-53	179
MS.gene59903.t1	MTR_2g102670	61.417	127	49	0	1	127	1239	1365	5.44e-53	179
MS.gene59903.t1	MTR_2g102640	61.417	127	49	0	1	127	1259	1385	2.09e-52	177
MS.gene59903.t1	MTR_4g011640	61.600	125	48	0	1	125	1264	1388	3.64e-52	177
MS.gene59903.t1	MTR_4g011630	60.000	125	50	0	1	125	1267	1391	1.88e-50	172
MS.gene59903.t1	MTR_7g098740	57.937	126	53	0	1	126	1242	1367	6.88e-50	170
MS.gene59903.t1	MTR_1g011650	59.055	127	50	1	1	127	1278	1402	1.09e-48	167
MS.gene59903.t1	MTR_7g098750	56.693	127	55	0	1	127	1284	1410	1.18e-48	167
MS.gene59903.t1	MTR_7g098370	57.143	126	54	0	1	126	1242	1367	1.82e-48	166
MS.gene59903.t1	MTR_7g098750	57.143	126	54	0	1	126	1014	1139	1.87e-48	166
MS.gene59903.t1	MTR_7g098760	54.839	124	56	0	1	124	1281	1404	9.37e-48	164
MS.gene59903.t1	MTR_1g492950	51.111	135	66	0	1	135	1295	1429	2.73e-44	154
MS.gene59903.t1	MTR_1g011640	55.469	128	55	1	1	128	1255	1380	5.42e-44	153
MS.gene59903.t1	MTR_7g098780	49.635	137	68	1	1	137	1246	1381	1.59e-42	149
MS.gene59903.t1	MTR_4g011620	57.724	123	52	0	1	123	1257	1379	4.35e-41	145
MS.gene59903.t1	MTR_7g098320	54.032	124	57	0	1	124	1276	1399	6.86e-41	144
MS.gene59903.t1	MTR_1g050525	54.545	121	55	0	1	121	1295	1415	3.43e-40	142
MS.gene59903.t1	MTR_7g104130	51.111	135	66	0	1	135	1284	1418	1.45e-39	140
MS.gene59903.t1	MTR_2g101090	56.250	128	50	1	1	128	1272	1393	3.03e-39	140
MS.gene59903.t1	MTR_7g098890	49.635	137	68	1	1	137	1184	1319	9.48e-37	133
MS.gene59903.t1	MTR_7g104150	45.185	135	74	0	1	135	1284	1418	1.21e-36	132
MS.gene59903.t1	MTR_7g098300	52.033	123	59	0	4	126	1279	1401	1.99e-36	132
MS.gene59903.t1	MTR_7g098800	51.095	137	66	1	1	137	1204	1339	6.85e-36	130
MS.gene59903.t1	MTR_7g407080	56.436	101	44	0	1	101	480	580	9.36e-36	129
MS.gene59903.t1	MTR_7g104110	45.926	135	73	0	1	135	1276	1410	2.00e-35	129
MS.gene59903.t1	MTR_8g014360	54.545	121	55	0	1	121	1306	1426	2.06e-35	129
MS.gene59903.t1	MTR_7g104100	40.876	137	81	0	1	137	1282	1418	2.60e-34	125
MS.gene59903.t1	MTR_4g123850	45.185	135	73	1	1	135	1259	1392	4.43e-34	125
MS.gene59903.t1	MTR_3g463680	47.899	119	62	0	2	120	1245	1363	5.87e-34	125
MS.gene59903.t1	MTR_3g107870	51.181	127	60	1	1	127	1291	1415	3.43e-31	117
MS.gene59903.t1	MTR_7g098750	55.952	84	37	0	1	84	1284	1367	7.29e-28	107
MS.gene59903.t1	MTR_5g070320	50.442	113	56	0	2	114	1260	1372	1.40e-27	107
MS.gene59903.t1	MTR_5g070320	50.442	113	56	0	2	114	973	1085	1.97e-27	106
MS.gene59903.t1	MTR_5g070320	50.442	113	56	0	2	114	1069	1181	2.02e-27	106
MS.gene59903.t1	MTR_7g104130	48.810	84	43	0	1	84	1284	1367	1.03e-17	78.6
MS.gene59903.t1	MTR_7g098790	36.782	87	50	3	55	137	194	279	5.01e-12	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59903.t1	AT2G26910	70.073	137	40	1	1	136	1246	1382	6.20e-65	213
MS.gene59903.t1	AT1G15520	60.526	114	45	0	1	114	1253	1366	5.82e-45	156
MS.gene59903.t1	AT1G66950	49.635	137	69	0	1	137	1281	1417	3.34e-41	145
MS.gene59903.t1	AT3G16340	52.344	128	61	0	1	128	1242	1369	2.71e-40	143
MS.gene59903.t1	AT3G16340	52.344	128	61	0	1	128	1237	1364	2.79e-40	143
MS.gene59903.t1	AT2G36380	48.905	137	70	0	1	137	1280	1416	2.06e-39	140
MS.gene59903.t1	AT1G15210	52.000	125	60	0	1	125	1268	1392	3.78e-39	140
MS.gene59903.t1	AT1G59870	49.600	125	63	0	1	125	1295	1419	4.19e-38	137
MS.gene59903.t1	AT2G29940	47.899	119	62	0	2	120	1255	1373	1.69e-34	126
MS.gene59903.t1	AT4G15230	37.226	137	85	1	1	137	1228	1363	8.72e-29	110
MS.gene59903.t1	AT4G15230	37.226	137	85	1	1	137	1228	1363	8.72e-29	110
MS.gene59903.t1	AT3G30842	40.945	127	73	1	1	127	1249	1373	1.16e-28	110
MS.gene59903.t1	AT4G15233	41.176	119	70	0	1	119	1077	1195	3.44e-27	105
MS.gene59903.t1	AT4G15233	41.176	119	70	0	1	119	1077	1195	3.44e-27	105
MS.gene59903.t1	AT4G15233	41.176	119	70	0	1	119	1158	1276	3.49e-27	105
MS.gene59903.t1	AT4G15233	41.176	119	70	0	1	119	1158	1276	3.49e-27	105
MS.gene59903.t1	AT4G15233	41.176	119	70	0	1	119	1202	1320	3.89e-27	105
MS.gene59903.t1	AT4G15233	41.176	119	70	0	1	119	1211	1329	4.01e-27	105
MS.gene59903.t1	AT4G15233	41.176	119	70	0	1	119	1220	1338	4.42e-27	105
MS.gene59903.t1	AT4G15236	38.686	137	83	1	1	137	1218	1353	5.91e-27	105
MS.gene59903.t1	AT4G15230	39.496	119	72	0	1	119	1149	1267	1.36e-26	103
MS.gene59903.t1	AT4G15215	37.815	119	74	0	1	119	1215	1333	1.25e-25	101
MS.gene59903.t1	AT4G15215	37.815	119	74	0	1	119	1215	1333	1.25e-25	101
MS.gene59903.t1	AT4G15215	37.815	119	74	0	1	119	1215	1333	1.25e-25	101
MS.gene59903.t1	AT4G15215	37.815	119	74	0	1	119	1215	1333	1.25e-25	101
MS.gene59903.t1	AT4G15215	37.815	119	74	0	1	119	1222	1340	1.28e-25	101
MS.gene59903.t1	AT4G15215	37.815	119	74	0	1	119	1222	1340	1.28e-25	101
MS.gene59903.t1	AT4G15215	37.815	119	74	0	1	119	1222	1340	1.28e-25	101
MS.gene59903.t1	AT4G15215	37.815	119	74	0	1	119	1222	1340	1.28e-25	101
MS.gene59903.t1	AT4G15215	37.815	119	74	0	1	119	1222	1340	1.28e-25	101
MS.gene59903.t1	AT4G15215	37.815	119	74	0	1	119	1218	1336	1.30e-25	101
MS.gene59903.t1	AT4G15215	37.815	119	74	0	1	119	1225	1343	1.30e-25	101
MS.gene59903.t1	AT3G53480	38.686	137	83	1	1	137	1278	1413	3.00e-25	100
MS.gene59903.t1	AT2G37280	38.596	114	70	0	1	114	1083	1196	4.37e-23	94.0
MS.gene59903.t1	AT2G37280	38.596	114	70	0	1	114	1270	1383	4.45e-23	94.0
MS.gene59903.t1	AT2G37280	38.596	114	70	0	1	114	1241	1354	4.95e-23	94.0
MS.gene59903.t1	AT4G15233	34.266	143	70	1	1	119	1220	1362	5.23e-23	94.0
MS.gene59903.t1	AT4G15230	33.333	90	59	1	1	89	1228	1317	1.78e-13	66.6
MS.gene59903.t1	AT2G37280	34.524	84	55	0	1	84	1241	1324	6.73e-11	59.3

Find 35 sgRNAs with CRISPR-Local

Find 50 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCTTTGAGTACGAGTCTTA+TGG	0.249406	8.4:+15648159	None:intergenic
ATTTACAGAGAATCCCTATT+TGG	0.269913	8.4:-15648294	MS.gene59903:intron
CATTTGTCTGGACTGTTGAT+AGG	0.287754	8.4:-15648639	MS.gene59903:CDS
TAATACCATCTCCACCAAAT+AGG	0.298789	8.4:+15648280	None:intergenic
ATTCCATGGGTTCATTTGTC+TGG	0.300093	8.4:-15648651	MS.gene59903:CDS
TTTGGTGGAGATGGTATTAC+TGG	0.315311	8.4:-15648276	MS.gene59903:CDS
TCTTTGAGTACGAGTCTTAT+GGG	0.344416	8.4:+15648160	None:intergenic
AATACCATCTCCACCAAATA+GGG	0.403081	8.4:+15648281	None:intergenic
CGTCACCATACTGTGAAGTT+AGG	0.409814	8.4:+15648221	None:intergenic
GGACTGTTGATAGGTTCATT+TGG	0.416665	8.4:-15648630	MS.gene59903:CDS
ATGGCAGCAACATGATGATT+TGG	0.431081	8.4:+15648538	None:intergenic
AGTAGTCATCATCCCATAGA+AGG	0.438282	8.4:+15648570	None:intergenic
CCATACAAAGTCCAGGCTAC+AGG	0.440044	8.4:+15648247	None:intergenic
CCTGTAGCCTGGACTTTGTA+TGG	0.447509	8.4:-15648247	MS.gene59903:CDS
ATCAGTTCCCATACCTTATG+AGG	0.447971	8.4:+15648463	None:intergenic
ATAGCCTGTGCAAACACATA+AGG	0.448636	8.4:+15648694	None:intergenic
GGTCTCCTAACTTCACAGTA+TGG	0.458953	8.4:-15648226	MS.gene59903:CDS
GAATCATAAAACCACTGAAA+AGG	0.509394	8.4:+15648485	None:intergenic
GAATCCCTATTTGGTGGAGA+TGG	0.512403	8.4:-15648285	MS.gene59903:CDS
GTTCCCTTATGTGTTTGCAC+AGG	0.515664	8.4:-15648698	MS.gene59903:CDS
CATCATGTTGCTGCCATCAT+CGG	0.523643	8.4:-15648532	MS.gene59903:CDS
TAGCCTGTGCAAACACATAA+GGG	0.525322	8.4:+15648695	None:intergenic
TATGGGTACCGAGCTTCCAT+TGG	0.528031	8.4:+15648177	None:intergenic
ACTGGGCAAACCCTGTAGCC+TGG	0.532642	8.4:-15648258	MS.gene59903:CDS
TACAGAGAATCCCTATTTGG+TGG	0.545065	8.4:-15648291	MS.gene59903:intron
ATAACATGGAGCACCGATGA+TGG	0.548775	8.4:+15648519	None:intergenic
TAGGAGACCATACAAAGTCC+AGG	0.559858	8.4:+15648240	None:intergenic
CATACAAAGTCCAGGCTACA+GGG	0.571123	8.4:+15648248	None:intergenic
GTGCTCCATGTTATATGTTG+TGG	0.581246	8.4:-15648510	MS.gene59903:CDS
GAAGCTAACCAATGGAAGCT+CGG	0.609079	8.4:-15648185	MS.gene59903:CDS
GTATGGTGACGATGATAAGT+TGG	0.618130	8.4:-15648209	MS.gene59903:CDS
AGTCCAGACAAATGAACCCA+TGG	0.630269	8.4:+15648648	None:intergenic
AAGTTGGTGAAGCTAACCAA+TGG	0.632225	8.4:-15648193	MS.gene59903:CDS
TTGGTGGAGATGGTATTACT+GGG	0.639389	8.4:-15648275	MS.gene59903:CDS
AGGTTCCACAACATATAACA+TGG	0.641887	8.4:+15648505	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATGTTATATTTTACCTTCTA+TGG	-	chr8.4:15648277-15648296	MS.gene59903:CDS	20.0%
!!!	TGTTATATTTTACCTTCTAT+GGG	-	chr8.4:15648278-15648297	MS.gene59903:CDS	20.0%
!!	CTCTCATAACAATAACTTTT+TGG	-	chr8.4:15648451-15648470	MS.gene59903:intron	25.0%
!!	TCTTCAATTTTCTATTCCAT+GGG	-	chr8.4:15648196-15648215	MS.gene59903:CDS	25.0%
	ATTTACAGAGAATCCCTATT+TGG	-	chr8.4:15648566-15648585	MS.gene59903:CDS	30.0%
	GAATCATAAAACCACTGAAA+AGG	+	chr8.4:15648378-15648397	None:intergenic	30.0%
	TATGATTCCTCATAAGGTAT+GGG	-	chr8.4:15648390-15648409	MS.gene59903:intron	30.0%
	TTATGATTCCTCATAAGGTA+TGG	-	chr8.4:15648389-15648408	MS.gene59903:intron	30.0%
!	CTCTTCAATTTTCTATTCCA+TGG	-	chr8.4:15648195-15648214	MS.gene59903:CDS	30.0%
!	GATGATAATTTTCGACATCA+AGG	+	chr8.4:15648481-15648500	None:intergenic	30.0%
!	TCGTACTCAAAGAAGTTTTT+GGG	-	chr8.4:15648710-15648729	MS.gene59903:CDS	30.0%
!!!	TGGTTTTATGATTCCTCATA+AGG	-	chr8.4:15648384-15648403	MS.gene59903:intron	30.0%
	AATACCATCTCCACCAAATA+GGG	+	chr8.4:15648582-15648601	None:intergenic	35.0%
	AGGTTCCACAACATATAACA+TGG	+	chr8.4:15648358-15648377	None:intergenic	35.0%
	GGGATTCTCTGTAAATTTCA+AGG	+	chr8.4:15648562-15648581	None:intergenic	35.0%
	GTTGCTTCCATTTACAGTTT+CGG	-	chr8.4:15648425-15648444	MS.gene59903:intron	35.0%
	TAATACCATCTCCACCAAAT+AGG	+	chr8.4:15648583-15648602	None:intergenic	35.0%
	TTCTTTGAGTACGAGTCTTA+TGG	+	chr8.4:15648704-15648723	None:intergenic	35.0%
!	CTCGTACTCAAAGAAGTTTT+TGG	-	chr8.4:15648709-15648728	MS.gene59903:CDS	35.0%
!	TCTTTGAGTACGAGTCTTAT+GGG	+	chr8.4:15648703-15648722	None:intergenic	35.0%
	AGAGCAACCGAAACTGTAAA+TGG	+	chr8.4:15648435-15648454	None:intergenic	40.0%
	AGTAGTCATCATCCCATAGA+AGG	+	chr8.4:15648293-15648312	None:intergenic	40.0%
	ATAGCCTGTGCAAACACATA+AGG	+	chr8.4:15648169-15648188	None:intergenic	40.0%
	ATCAGTTCCCATACCTTATG+AGG	+	chr8.4:15648400-15648419	None:intergenic	40.0%
	ATGGCAGCAACATGATGATT+TGG	+	chr8.4:15648325-15648344	None:intergenic	40.0%
	ATTCCATGGGTTCATTTGTC+TGG	-	chr8.4:15648209-15648228	MS.gene59903:CDS	40.0%
	CATTTGTCTGGACTGTTGAT+AGG	-	chr8.4:15648221-15648240	MS.gene59903:CDS	40.0%
	GTGCTCCATGTTATATGTTG+TGG	-	chr8.4:15648350-15648369	MS.gene59903:intron	40.0%
	TACAGAGAATCCCTATTTGG+TGG	-	chr8.4:15648569-15648588	MS.gene59903:CDS	40.0%
	TAGCCTGTGCAAACACATAA+GGG	+	chr8.4:15648168-15648187	None:intergenic	40.0%
	TTGGTGGAGATGGTATTACT+GGG	-	chr8.4:15648585-15648604	MS.gene59903:CDS	40.0%
	TTTGGTGGAGATGGTATTAC+TGG	-	chr8.4:15648584-15648603	MS.gene59903:CDS	40.0%
!	ATGTTGTGGAACCTTTTCAG+TGG	-	chr8.4:15648364-15648383	MS.gene59903:intron	40.0%
!	GGACTGTTGATAGGTTCATT+TGG	-	chr8.4:15648230-15648249	MS.gene59903:CDS	40.0%
!	GTATGGTGACGATGATAAGT+TGG	-	chr8.4:15648651-15648670	MS.gene59903:CDS	40.0%
!!	AAGTTGGTGAAGCTAACCAA+TGG	-	chr8.4:15648667-15648686	MS.gene59903:CDS	40.0%
	AGTCCAGACAAATGAACCCA+TGG	+	chr8.4:15648215-15648234	None:intergenic	45.0%
	CATACAAAGTCCAGGCTACA+GGG	+	chr8.4:15648615-15648634	None:intergenic	45.0%
	CATCATGTTGCTGCCATCAT+CGG	-	chr8.4:15648328-15648347	MS.gene59903:intron	45.0%
	CGTCACCATACTGTGAAGTT+AGG	+	chr8.4:15648642-15648661	None:intergenic	45.0%
	GAAGCTAACCAATGGAAGCT+CGG	-	chr8.4:15648675-15648694	MS.gene59903:CDS	45.0%
	GGTCTCCTAACTTCACAGTA+TGG	-	chr8.4:15648634-15648653	MS.gene59903:CDS	45.0%
	GTTCCCTTATGTGTTTGCAC+AGG	-	chr8.4:15648162-15648181	MS.gene59903:CDS	45.0%
	TAGGAGACCATACAAAGTCC+AGG	+	chr8.4:15648623-15648642	None:intergenic	45.0%
!	GAATCCCTATTTGGTGGAGA+TGG	-	chr8.4:15648575-15648594	MS.gene59903:CDS	45.0%
!!	ATAACATGGAGCACCGATGA+TGG	+	chr8.4:15648344-15648363	None:intergenic	45.0%
	CCATACAAAGTCCAGGCTAC+AGG	+	chr8.4:15648616-15648635	None:intergenic	50.0%
	CCTGTAGCCTGGACTTTGTA+TGG	-	chr8.4:15648613-15648632	MS.gene59903:CDS	50.0%
!!	TATGGGTACCGAGCTTCCAT+TGG	+	chr8.4:15648686-15648705	None:intergenic	50.0%
	ACTGGGCAAACCCTGTAGCC+TGG	-	chr8.4:15648602-15648621	MS.gene59903:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	15648151	15648731	15648151	ID=MS.gene59903
chr8.4	mRNA	15648151	15648731	15648151	ID=MS.gene59903.t1;Parent=MS.gene59903
chr8.4	exon	15648477	15648731	15648477	ID=MS.gene59903.t1.exon1;Parent=MS.gene59903.t1
chr8.4	CDS	15648477	15648731	15648477	ID=cds.MS.gene59903.t1;Parent=MS.gene59903.t1
chr8.4	exon	15648151	15648308	15648151	ID=MS.gene59903.t1.exon2;Parent=MS.gene59903.t1
chr8.4	CDS	15648151	15648308	15648151	ID=cds.MS.gene59903.t1;Parent=MS.gene59903.t1

Gene Sequence

>MS.gene59903

GTTGTGATTGAGTTCCCTTATGTGTTTGCACAGGCTATCATATACTCTTCAATTTTCTATTCCATGGGTTCATTTGTCTGGACTGTTGATAGGTTCATTTGGTACTTATTCTTCATGTATTTGACTATGTTATATTTTACCTTCTATGGGATGATGACTACTGCTGTTACACCAAATCATCATGTTGCTGCCATCATCGGTGCTCCATGTTATATGTTGTGGAACCTTTTCAGTGGTTTTATGATTCCTCATAAGGTATGGGAACTGATGCTTTGTTGCTTCCATTTACAGTTTCGGTTGCTCTCATAACAATAACTTTTTGGACTACCTTGATGTCGAAAATTATCATCTAGTATTATACTGATGTAATGTTTTTGAGAATTATCTGTCATCGAATAACTTATTTCTCCTTGAAATTTACAGAGAATCCCTATTTGGTGGAGATGGTATTACTGGGCAAACCCTGTAGCCTGGACTTTGTATGGTCTCCTAACTTCACAGTATGGTGACGATGATAAGTTGGTGAAGCTAACCAATGGAAGCTCGGTACCCATAAGACTCGTACTCAAAGAAGTTTTTGG

Protein sequence

>MS.gene59903.t1

VVIEFPYVFAQAIIYSSIFYSMGSFVWTVDRFIWYLFFMYLTMLYFTFYGMMTTAVTPNHHVAAIIGAPCYMLWNLFSGFMIPHKRIPIWWRWYYWANPVAWTLYGLLTSQYGDDDKLVKLTNGSSVPIRLVLKEVF