Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064944.t1 | XP_013467131.1 | 97.4 | 233 | 4 | 1 | 1 | 231 | 1 | 233 | 3.20E-99 | 371.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064944.t1 | I3T478 | 97.4 | 233 | 4 | 1 | 1 | 231 | 1 | 233 | 2.3e-99 | 371.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene064944 | 0.801099 | 1.06E-48 | -1.69E-46 |
| MS.gene049159 | MS.gene064944 | 0.835933 | 1.26E-56 | -1.69E-46 |
| MS.gene049190 | MS.gene064944 | 0.806409 | 8.34E-50 | -1.69E-46 |
| MS.gene049255 | MS.gene064944 | 0.800671 | 1.29E-48 | -1.69E-46 |
| MS.gene049260 | MS.gene064944 | 0.801844 | 7.43E-49 | -1.69E-46 |
| MS.gene049271 | MS.gene064944 | 0.805263 | 1.45E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene064944 | 0.80458 | 2.02E-49 | -1.69E-46 |
| MS.gene049341 | MS.gene064944 | 0.853944 | 1.71E-61 | -1.69E-46 |
| MS.gene049382 | MS.gene064944 | 0.826412 | 2.75E-54 | -1.69E-46 |
| MS.gene049404 | MS.gene064944 | 0.840333 | 9.26E-58 | -1.69E-46 |
| MS.gene049435 | MS.gene064944 | 0.831518 | 1.60E-55 | -1.69E-46 |
| MS.gene049501 | MS.gene064944 | 0.840019 | 1.12E-57 | -1.69E-46 |
| MS.gene049647 | MS.gene064944 | 0.800948 | 1.13E-48 | -1.69E-46 |
| MS.gene049695 | MS.gene064944 | 0.810673 | 1.03E-50 | -1.69E-46 |
| MS.gene049756 | MS.gene064944 | 0.802038 | 6.78E-49 | -1.69E-46 |
| MS.gene04976 | MS.gene064944 | 0.801746 | 7.79E-49 | -1.69E-46 |
| MS.gene049821 | MS.gene064944 | 0.8363 | 1.01E-56 | -1.69E-46 |
| MS.gene049824 | MS.gene064944 | 0.808429 | 3.11E-50 | -1.69E-46 |
| MS.gene049825 | MS.gene064944 | 0.811404 | 7.12E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene064944 | 0.843597 | 1.27E-58 | -1.69E-46 |
| MS.gene049873 | MS.gene064944 | 0.81418 | 1.76E-51 | -1.69E-46 |
| MS.gene049979 | MS.gene064944 | 0.831824 | 1.34E-55 | -1.69E-46 |
| MS.gene050020 | MS.gene064944 | 0.90326 | 4.17E-79 | -1.69E-46 |
| MS.gene050137 | MS.gene064944 | 0.827414 | 1.59E-54 | -1.69E-46 |
| MS.gene050156 | MS.gene064944 | 0.803387 | 3.57E-49 | -1.69E-46 |
| MS.gene05016 | MS.gene064944 | 0.837492 | 5.04E-57 | -1.69E-46 |
| MS.gene050201 | MS.gene064944 | 0.806572 | 7.71E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene064944 | 0.800344 | 1.51E-48 | -1.69E-46 |
| MS.gene050228 | MS.gene064944 | 0.803148 | 4.00E-49 | -1.69E-46 |
| MS.gene050251 | MS.gene064944 | 0.806055 | 9.91E-50 | -1.69E-46 |
| MS.gene050303 | MS.gene064944 | 0.813104 | 3.03E-51 | -1.69E-46 |
| MS.gene050330 | MS.gene064944 | -0.803835 | 2.88E-49 | -1.69E-46 |
| MS.gene050438 | MS.gene064944 | 0.849538 | 3.03E-60 | -1.69E-46 |
| MS.gene050442 | MS.gene064944 | 0.842621 | 2.31E-58 | -1.69E-46 |
| MS.gene05045 | MS.gene064944 | 0.811441 | 6.99E-51 | -1.69E-46 |
| MS.gene050586 | MS.gene064944 | 0.859518 | 3.91E-63 | -1.69E-46 |
| MS.gene050680 | MS.gene064944 | 0.813184 | 2.91E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene064944 | 0.822274 | 2.59E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene064944 | 0.820274 | 7.48E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene064944 | 0.813916 | 2.01E-51 | -1.69E-46 |
| MS.gene050778 | MS.gene064944 | 0.808563 | 2.91E-50 | -1.69E-46 |
| MS.gene050780 | MS.gene064944 | 0.824415 | 8.17E-54 | -1.69E-46 |
| MS.gene050807 | MS.gene064944 | 0.917998 | 2.68E-86 | -1.69E-46 |
| MS.gene050808 | MS.gene064944 | 0.881901 | 1.63E-70 | -1.69E-46 |
| MS.gene050815 | MS.gene064944 | 0.859523 | 3.90E-63 | -1.69E-46 |
| MS.gene050844 | MS.gene064944 | 0.824792 | 6.66E-54 | -1.69E-46 |
| MS.gene050959 | MS.gene064944 | 0.858853 | 6.19E-63 | -1.69E-46 |
| MS.gene051180 | MS.gene064944 | 0.851229 | 1.02E-60 | -1.69E-46 |
| MS.gene051243 | MS.gene064944 | 0.81377 | 2.16E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene064944 | 0.855353 | 6.68E-62 | -1.69E-46 |
| MS.gene051265 | MS.gene064944 | 0.863007 | 3.38E-64 | -1.69E-46 |
| MS.gene051328 | MS.gene064944 | 0.831899 | 1.28E-55 | -1.69E-46 |
| MS.gene051344 | MS.gene064944 | 0.811949 | 5.42E-51 | -1.69E-46 |
| MS.gene051388 | MS.gene064944 | 0.819471 | 1.14E-52 | -1.69E-46 |
| MS.gene05157 | MS.gene064944 | 0.855548 | 5.86E-62 | -1.69E-46 |
| MS.gene051626 | MS.gene064944 | 0.832137 | 1.12E-55 | -1.69E-46 |
| MS.gene051700 | MS.gene064944 | 0.817602 | 3.03E-52 | -1.69E-46 |
| MS.gene051719 | MS.gene064944 | 0.882768 | 7.90E-71 | -1.69E-46 |
| MS.gene051720 | MS.gene064944 | 0.863198 | 2.95E-64 | -1.69E-46 |
| MS.gene051744 | MS.gene064944 | 0.821219 | 4.54E-53 | -1.69E-46 |
| MS.gene051789 | MS.gene064944 | 0.861363 | 1.08E-63 | -1.69E-46 |
| MS.gene051957 | MS.gene064944 | 0.81264 | 3.83E-51 | -1.69E-46 |
| MS.gene052012 | MS.gene064944 | 0.814312 | 1.64E-51 | -1.69E-46 |
| MS.gene052020 | MS.gene064944 | 0.861748 | 8.25E-64 | -1.69E-46 |
| MS.gene052133 | MS.gene064944 | 0.843714 | 1.18E-58 | -1.69E-46 |
| MS.gene052190 | MS.gene064944 | 0.804515 | 2.08E-49 | -1.69E-46 |
| MS.gene052302 | MS.gene064944 | 0.809483 | 1.85E-50 | -1.69E-46 |
| MS.gene052323 | MS.gene064944 | 0.847176 | 1.36E-59 | -1.69E-46 |
| MS.gene052376 | MS.gene064944 | 0.824827 | 6.53E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene064944 | 0.829413 | 5.22E-55 | -1.69E-46 |
| MS.gene052519 | MS.gene064944 | 0.817948 | 2.53E-52 | -1.69E-46 |
| MS.gene052561 | MS.gene064944 | 0.808937 | 2.42E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene064944 | 0.804626 | 1.97E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene064944 | 0.8044 | 2.20E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene064944 | 0.856918 | 2.32E-62 | -1.69E-46 |
| MS.gene052612 | MS.gene064944 | 0.827584 | 1.44E-54 | -1.69E-46 |
| MS.gene052613 | MS.gene064944 | 0.841375 | 4.94E-58 | -1.69E-46 |
| MS.gene052665 | MS.gene064944 | 0.888927 | 3.82E-73 | -1.69E-46 |
| MS.gene052673 | MS.gene064944 | -0.800568 | 1.36E-48 | -1.69E-46 |
| MS.gene052732 | MS.gene064944 | 0.808738 | 2.67E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene064944 | 0.814074 | 1.85E-51 | -1.69E-46 |
| MS.gene052858 | MS.gene064944 | 0.807287 | 5.44E-50 | -1.69E-46 |
| MS.gene052860 | MS.gene064944 | 0.822444 | 2.36E-53 | -1.69E-46 |
| MS.gene052863 | MS.gene064944 | 0.844967 | 5.45E-59 | -1.69E-46 |
| MS.gene052879 | MS.gene064944 | 0.811616 | 6.41E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene064944 | 0.836404 | 9.54E-57 | -1.69E-46 |
| MS.gene053008 | MS.gene064944 | 0.829276 | 5.64E-55 | -1.69E-46 |
| MS.gene053054 | MS.gene064944 | -0.833025 | 6.76E-56 | -1.69E-46 |
| MS.gene053074 | MS.gene064944 | 0.866174 | 3.46E-65 | -1.69E-46 |
| MS.gene053144 | MS.gene064944 | 0.804083 | 2.56E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene064944 | 0.822652 | 2.11E-53 | -1.69E-46 |
| MS.gene053174 | MS.gene064944 | 0.84409 | 9.38E-59 | -1.69E-46 |
| MS.gene053221 | MS.gene064944 | 0.84432 | 8.13E-59 | -1.69E-46 |
| MS.gene053226 | MS.gene064944 | 0.8501 | 2.11E-60 | -1.69E-46 |
| MS.gene053331 | MS.gene064944 | 0.813068 | 3.09E-51 | -1.69E-46 |
| MS.gene053383 | MS.gene064944 | 0.810727 | 9.98E-51 | -1.69E-46 |
| MS.gene053437 | MS.gene064944 | 0.817926 | 2.56E-52 | -1.69E-46 |
| MS.gene053563 | MS.gene064944 | 0.851421 | 8.98E-61 | -1.69E-46 |
| MS.gene053565 | MS.gene064944 | 0.823823 | 1.13E-53 | -1.69E-46 |
| MS.gene053581 | MS.gene064944 | 0.818477 | 1.92E-52 | -1.69E-46 |
| MS.gene053599 | MS.gene064944 | 0.827122 | 1.86E-54 | -1.69E-46 |
| MS.gene053630 | MS.gene064944 | 0.856418 | 3.26E-62 | -1.69E-46 |
| MS.gene05364 | MS.gene064944 | 0.805469 | 1.32E-49 | -1.69E-46 |
| MS.gene053883 | MS.gene064944 | 0.804109 | 2.53E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene064944 | 0.803414 | 3.53E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene064944 | 0.815131 | 1.08E-51 | -1.69E-46 |
| MS.gene054185 | MS.gene064944 | 0.807803 | 4.23E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene064944 | 0.805414 | 1.35E-49 | -1.69E-46 |
| MS.gene054433 | MS.gene064944 | 0.823074 | 1.68E-53 | -1.69E-46 |
| MS.gene054467 | MS.gene064944 | 0.82648 | 2.65E-54 | -1.69E-46 |
| MS.gene054472 | MS.gene064944 | 0.842745 | 2.14E-58 | -1.69E-46 |
| MS.gene054550 | MS.gene064944 | 0.839166 | 1.86E-57 | -1.69E-46 |
| MS.gene054559 | MS.gene064944 | 0.809035 | 2.31E-50 | -1.69E-46 |
| MS.gene05456 | MS.gene064944 | 0.825196 | 5.35E-54 | -1.69E-46 |
| MS.gene054584 | MS.gene064944 | 0.808021 | 3.80E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene064944 | 0.832719 | 8.05E-56 | -1.69E-46 |
| MS.gene05462 | MS.gene064944 | 0.834435 | 3.00E-56 | -1.69E-46 |
| MS.gene054651 | MS.gene064944 | 0.813867 | 2.06E-51 | -1.69E-46 |
| MS.gene05468 | MS.gene064944 | 0.811781 | 5.90E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene064944 | 0.82562 | 4.24E-54 | -1.69E-46 |
| MS.gene054791 | MS.gene064944 | 0.825691 | 4.08E-54 | -1.69E-46 |
| MS.gene054801 | MS.gene064944 | 0.805433 | 1.34E-49 | -1.69E-46 |
| MS.gene054833 | MS.gene064944 | 0.828355 | 9.42E-55 | -1.69E-46 |
| MS.gene054942 | MS.gene064944 | 0.814801 | 1.28E-51 | -1.69E-46 |
| MS.gene055144 | MS.gene064944 | 0.808541 | 2.94E-50 | -1.69E-46 |
| MS.gene055227 | MS.gene064944 | 0.824295 | 8.72E-54 | -1.69E-46 |
| MS.gene055356 | MS.gene064944 | 0.848682 | 5.25E-60 | -1.69E-46 |
| MS.gene055357 | MS.gene064944 | 0.858483 | 7.99E-63 | -1.69E-46 |
| MS.gene055358 | MS.gene064944 | 0.853375 | 2.49E-61 | -1.69E-46 |
| MS.gene055359 | MS.gene064944 | 0.834655 | 2.64E-56 | -1.69E-46 |
| MS.gene055363 | MS.gene064944 | 0.823023 | 1.73E-53 | -1.69E-46 |
| MS.gene055465 | MS.gene064944 | 0.857644 | 1.42E-62 | -1.69E-46 |
| MS.gene055466 | MS.gene064944 | 0.874288 | 7.59E-68 | -1.69E-46 |
| MS.gene055468 | MS.gene064944 | 0.859805 | 3.21E-63 | -1.69E-46 |
| MS.gene055469 | MS.gene064944 | 0.813856 | 2.07E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene064944 | 0.845827 | 3.19E-59 | -1.69E-46 |
| MS.gene055537 | MS.gene064944 | 0.800022 | 1.75E-48 | -1.69E-46 |
| MS.gene055580 | MS.gene064944 | -0.824912 | 6.24E-54 | -1.69E-46 |
| MS.gene055608 | MS.gene064944 | 0.853148 | 2.89E-61 | -1.69E-46 |
| MS.gene055711 | MS.gene064944 | 0.809331 | 1.99E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene064944 | 0.844268 | 8.40E-59 | -1.69E-46 |
| MS.gene055818 | MS.gene064944 | 0.846362 | 2.28E-59 | -1.69E-46 |
| MS.gene055890 | MS.gene064944 | 0.833382 | 5.51E-56 | -1.69E-46 |
| MS.gene055891 | MS.gene064944 | 0.827048 | 1.94E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene064944 | 0.812871 | 3.41E-51 | -1.69E-46 |
| MS.gene056005 | MS.gene064944 | 0.82911 | 6.18E-55 | -1.69E-46 |
| MS.gene056043 | MS.gene064944 | -0.810081 | 1.38E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene064944 | 0.855288 | 6.97E-62 | -1.69E-46 |
| MS.gene056069 | MS.gene064944 | -0.844969 | 5.44E-59 | -1.69E-46 |
| MS.gene056173 | MS.gene064944 | 0.843632 | 1.24E-58 | -1.69E-46 |
| MS.gene056308 | MS.gene064944 | 0.809722 | 1.64E-50 | -1.69E-46 |
| MS.gene056366 | MS.gene064944 | 0.843698 | 1.19E-58 | -1.69E-46 |
| MS.gene056498 | MS.gene064944 | 0.81631 | 5.91E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene064944 | 0.804358 | 2.24E-49 | -1.69E-46 |
| MS.gene056542 | MS.gene064944 | 0.808896 | 2.47E-50 | -1.69E-46 |
| MS.gene056543 | MS.gene064944 | 0.813445 | 2.55E-51 | -1.69E-46 |
| MS.gene056545 | MS.gene064944 | 0.817096 | 3.94E-52 | -1.69E-46 |
| MS.gene056553 | MS.gene064944 | 0.864998 | 8.12E-65 | -1.69E-46 |
| MS.gene056584 | MS.gene064944 | 0.810343 | 1.21E-50 | -1.69E-46 |
| MS.gene056589 | MS.gene064944 | 0.843582 | 1.28E-58 | -1.69E-46 |
| MS.gene056595 | MS.gene064944 | 0.802465 | 5.54E-49 | -1.69E-46 |
| MS.gene056642 | MS.gene064944 | 0.81027 | 1.25E-50 | -1.69E-46 |
| MS.gene056643 | MS.gene064944 | 0.859564 | 3.79E-63 | -1.69E-46 |
| MS.gene056760 | MS.gene064944 | 0.839595 | 1.44E-57 | -1.69E-46 |
| MS.gene056859 | MS.gene064944 | 0.844817 | 5.98E-59 | -1.69E-46 |
| MS.gene057060 | MS.gene064944 | 0.876215 | 1.67E-68 | -1.69E-46 |
| MS.gene057260 | MS.gene064944 | 0.806987 | 6.30E-50 | -1.69E-46 |
| MS.gene057314 | MS.gene064944 | 0.808986 | 2.37E-50 | -1.69E-46 |
| MS.gene057395 | MS.gene064944 | 0.808212 | 3.46E-50 | -1.69E-46 |
| MS.gene057414 | MS.gene064944 | 0.824537 | 7.65E-54 | -1.69E-46 |
| MS.gene057444 | MS.gene064944 | 0.843856 | 1.08E-58 | -1.69E-46 |
| MS.gene057446 | MS.gene064944 | 0.801524 | 8.65E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene064944 | 0.849283 | 3.57E-60 | -1.69E-46 |
| MS.gene057869 | MS.gene064944 | 0.833624 | 4.79E-56 | -1.69E-46 |
| MS.gene057915 | MS.gene064944 | 0.831745 | 1.40E-55 | -1.69E-46 |
| MS.gene058084 | MS.gene064944 | 0.819185 | 1.33E-52 | -1.69E-46 |
| MS.gene058168 | MS.gene064944 | 0.880857 | 3.89E-70 | -1.69E-46 |
| MS.gene058216 | MS.gene064944 | 0.802018 | 6.84E-49 | -1.69E-46 |
| MS.gene058339 | MS.gene064944 | 0.802889 | 4.53E-49 | -1.69E-46 |
| MS.gene05847 | MS.gene064944 | 0.83451 | 2.87E-56 | -1.69E-46 |
| MS.gene058625 | MS.gene064944 | 0.842313 | 2.79E-58 | -1.69E-46 |
| MS.gene058636 | MS.gene064944 | 0.842139 | 3.10E-58 | -1.69E-46 |
| MS.gene058829 | MS.gene064944 | 0.831441 | 1.67E-55 | -1.69E-46 |
| MS.gene058851 | MS.gene064944 | 0.816768 | 4.66E-52 | -1.69E-46 |
| MS.gene058852 | MS.gene064944 | 0.820182 | 7.85E-53 | -1.69E-46 |
| MS.gene058906 | MS.gene064944 | 0.830937 | 2.22E-55 | -1.69E-46 |
| MS.gene058982 | MS.gene064944 | 0.80347 | 3.43E-49 | -1.69E-46 |
| MS.gene059006 | MS.gene064944 | 0.865417 | 5.99E-65 | -1.69E-46 |
| MS.gene059015 | MS.gene064944 | 0.808401 | 3.15E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene064944 | 0.805199 | 1.50E-49 | -1.69E-46 |
| MS.gene059124 | MS.gene064944 | 0.812843 | 3.46E-51 | -1.69E-46 |
| MS.gene059128 | MS.gene064944 | 0.836867 | 7.28E-57 | -1.69E-46 |
| MS.gene05954 | MS.gene064944 | 0.839216 | 1.81E-57 | -1.69E-46 |
| MS.gene059569 | MS.gene064944 | 0.838136 | 3.44E-57 | -1.69E-46 |
| MS.gene059607 | MS.gene064944 | 0.82951 | 4.95E-55 | -1.69E-46 |
| MS.gene059625 | MS.gene064944 | 0.802328 | 5.91E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene064944 | 0.818544 | 1.85E-52 | -1.69E-46 |
| MS.gene059725 | MS.gene064944 | 0.828398 | 9.19E-55 | -1.69E-46 |
| MS.gene05978 | MS.gene064944 | 0.812489 | 4.13E-51 | -1.69E-46 |
| MS.gene059789 | MS.gene064944 | 0.807048 | 6.11E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene064944 | 0.815314 | 9.85E-52 | -1.69E-46 |
| MS.gene059863 | MS.gene064944 | 0.80672 | 7.17E-50 | -1.69E-46 |
| MS.gene059937 | MS.gene064944 | 0.867801 | 1.05E-65 | -1.69E-46 |
| MS.gene060137 | MS.gene064944 | -0.865014 | 8.03E-65 | -1.69E-46 |
| MS.gene060194 | MS.gene064944 | 0.804455 | 2.14E-49 | -1.69E-46 |
| MS.gene060312 | MS.gene064944 | 0.817136 | 3.86E-52 | -1.69E-46 |
| MS.gene060322 | MS.gene064944 | 0.834014 | 3.83E-56 | -1.69E-46 |
| MS.gene060429 | MS.gene064944 | 0.843008 | 1.82E-58 | -1.69E-46 |
| MS.gene060470 | MS.gene064944 | 0.818517 | 1.88E-52 | -1.69E-46 |
| MS.gene060480 | MS.gene064944 | 0.818441 | 1.96E-52 | -1.69E-46 |
| MS.gene060519 | MS.gene064944 | 0.800028 | 1.75E-48 | -1.69E-46 |
| MS.gene060521 | MS.gene064944 | 0.803122 | 4.05E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene064944 | 0.828408 | 9.14E-55 | -1.69E-46 |
| MS.gene060587 | MS.gene064944 | 0.870418 | 1.48E-66 | -1.69E-46 |
| MS.gene060619 | MS.gene064944 | 0.805162 | 1.52E-49 | -1.69E-46 |
| MS.gene060634 | MS.gene064944 | -0.814813 | 1.27E-51 | -1.69E-46 |
| MS.gene060637 | MS.gene064944 | 0.808165 | 3.54E-50 | -1.69E-46 |
| MS.gene060683 | MS.gene064944 | 0.803202 | 3.90E-49 | -1.69E-46 |
| MS.gene060685 | MS.gene064944 | 0.801938 | 7.11E-49 | -1.69E-46 |
| MS.gene060690 | MS.gene064944 | 0.816865 | 4.44E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene064944 | 0.845994 | 2.87E-59 | -1.69E-46 |
| MS.gene060918 | MS.gene064944 | 0.807842 | 4.15E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene064944 | 0.813658 | 2.29E-51 | -1.69E-46 |
| MS.gene061176 | MS.gene064944 | 0.828456 | 8.90E-55 | -1.69E-46 |
| MS.gene061177 | MS.gene064944 | 0.827613 | 1.42E-54 | -1.69E-46 |
| MS.gene061178 | MS.gene064944 | 0.827837 | 1.25E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064944.t1 | MTR_1g046070 | 96.996 | 233 | 5 | 1 | 1 | 231 | 1 | 233 | 8.00e-155 | 429 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064944.t1 | AT4G13540 | 46.061 | 165 | 71 | 4 | 49 | 212 | 37 | 184 | 2.25e-32 | 117 |
| MS.gene064944.t1 | AT3G23930 | 41.279 | 172 | 78 | 4 | 52 | 212 | 40 | 199 | 1.88e-23 | 94.4 |
Find 48 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTACCATCATATGTTCTT+TGG | 0.233440 | 1.4:+30540501 | None:intergenic |
| TGAGAAAGAGTGGGAATTAA+TGG | 0.247721 | 1.4:-30540636 | MS.gene064944:CDS |
| GAAGAAGTTGAAAATCAAAT+TGG | 0.250274 | 1.4:-30539661 | MS.gene064944:CDS |
| TTCTTCTCTTTAGTTTGAAT+TGG | 0.254934 | 1.4:+30539681 | None:intergenic |
| AAAGCTTTAAAAGCTCAATT+AGG | 0.297525 | 1.4:-30539789 | MS.gene064944:CDS |
| ATTAATGGGGACTAAGCTTT+TGG | 0.315398 | 1.4:-30540621 | MS.gene064944:CDS |
| AAAGGGAATTTGACTTGTTA+AGG | 0.331176 | 1.4:-30539737 | MS.gene064944:CDS |
| TAAAGGAGATAATGTGTGAT+AGG | 0.355573 | 1.4:-30540835 | MS.gene064944:CDS |
| ACTTCTACAAGAAGAAATAA+AGG | 0.374088 | 1.4:-30540852 | MS.gene064944:CDS |
| GAACTATGAGAGGGAGATAA+TGG | 0.387809 | 1.4:-30540798 | MS.gene064944:CDS |
| GAGAAAGAGTGGGAATTAAT+GGG | 0.405188 | 1.4:-30540635 | MS.gene064944:CDS |
| GAGGGAAGTGGTGGAAGAGA+AGG | 0.429388 | 1.4:-30540708 | MS.gene064944:CDS |
| AAGAGAAGGAAGAGAAGATA+AGG | 0.430927 | 1.4:-30540694 | MS.gene064944:CDS |
| AAGAAGTTGAAAATCAAATT+GGG | 0.435875 | 1.4:-30539660 | MS.gene064944:CDS |
| GGTGAAGCAGTTGAGGGAAG+TGG | 0.438865 | 1.4:-30540720 | MS.gene064944:CDS |
| AAGAAGAGGTGAAGCAGTTG+AGG | 0.440787 | 1.4:-30540727 | MS.gene064944:CDS |
| TCACAGGAGATGGTTTGTAT+TGG | 0.451338 | 1.4:-30539881 | MS.gene064944:intron |
| AGAAGAATTGTGAGAAAGAG+TGG | 0.454742 | 1.4:-30540646 | MS.gene064944:CDS |
| ATAAGGGAGATGGAAGAGGT+TGG | 0.460472 | 1.4:-30540677 | MS.gene064944:CDS |
| ACTTGTTAAGGCAAAGTTTG+AGG | 0.469148 | 1.4:-30539725 | MS.gene064944:CDS |
| AAGAAAGGTACAAACAAGAA+AGG | 0.469395 | 1.4:-30539755 | MS.gene064944:CDS |
| AGAGAAGGAAGAGAAGATAA+GGG | 0.476340 | 1.4:-30540693 | MS.gene064944:CDS |
| AGAAGAGGTGAAGCAGTTGA+GGG | 0.480459 | 1.4:-30540726 | MS.gene064944:CDS |
| AAGAGAGTAGGAACTATGAG+AGG | 0.487797 | 1.4:-30540808 | MS.gene064944:CDS |
| GAAGATAAGGGAGATGGAAG+AGG | 0.488344 | 1.4:-30540681 | MS.gene064944:CDS |
| TACAAATTGAAAATCTGAAG+AGG | 0.492525 | 1.4:-30539839 | MS.gene064944:CDS |
| GTGATAGGGAGAAAGAGAGT+AGG | 0.501313 | 1.4:-30540820 | MS.gene064944:CDS |
| GGAAGAGAAGATAAGGGAGA+TGG | 0.503969 | 1.4:-30540687 | MS.gene064944:CDS |
| GAGATGAAGCTGTTGAGAAG+TGG | 0.508742 | 1.4:-30540568 | MS.gene064944:CDS |
| TAGGTTCAGTGGAGAAAGAA+AGG | 0.512086 | 1.4:-30539770 | MS.gene064944:CDS |
| GAAGCAGTTGAGGGAAGTGG+TGG | 0.513840 | 1.4:-30540717 | MS.gene064944:CDS |
| AAAAGCTCAATTAGGTTCAG+TGG | 0.518823 | 1.4:-30539781 | MS.gene064944:CDS |
| AGAGAGTAGGAACTATGAGA+GGG | 0.522297 | 1.4:-30540807 | MS.gene064944:CDS |
| CTCATCCAAAGAACATATGA+TGG | 0.522947 | 1.4:-30540506 | MS.gene064944:intron |
| AAAGGAGATAATGTGTGATA+GGG | 0.526845 | 1.4:-30540834 | MS.gene064944:CDS |
| AGAAAGGTACAAACAAGAAA+GGG | 0.530283 | 1.4:-30539754 | MS.gene064944:CDS |
| GGAGATGGAAGAGGTTGGAA+TGG | 0.546010 | 1.4:-30540672 | MS.gene064944:CDS |
| CAAAGTTTGAGGATCATGAA+TGG | 0.562620 | 1.4:-30539714 | MS.gene064944:CDS |
| GGTGAAGAGGTTGAAAGAAG+AGG | 0.569093 | 1.4:-30540741 | MS.gene064944:CDS |
| ATTGGAAACAAGAGGTGAAG+AGG | 0.596605 | 1.4:-30540754 | MS.gene064944:CDS |
| ACAAATTGAAAATCTGAAGA+GGG | 0.598118 | 1.4:-30539838 | MS.gene064944:CDS |
| GAAGAATTGTGAGAAAGAGT+GGG | 0.599083 | 1.4:-30540645 | MS.gene064944:CDS |
| AGAAAGAGTGGGAATTAATG+GGG | 0.618319 | 1.4:-30540634 | MS.gene064944:CDS |
| AGATGAAGGAGGAAAGAGCA+AGG | 0.618929 | 1.4:-30540592 | MS.gene064944:CDS |
| TGGTTTGTATTGGAAAGCTG+AGG | 0.636251 | 1.4:-30539871 | MS.gene064944:CDS |
| GGAGGCAGATTGGAAACAAG+AGG | 0.643296 | 1.4:-30540762 | MS.gene064944:CDS |
| TTTGGTTCAAGAGATGAAGG+AGG | 0.645416 | 1.4:-30540603 | MS.gene064944:CDS |
| GGGGCCAATTCAAAGATGGG+GGG | 0.731569 | 1.4:-30540950 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTCATTACATATTTTTG+TGG | + | chr1.4:30539701-30539720 | None:intergenic | 15.0% |
| !! | AAGAAGTTGAAAATCAAATT+GGG | - | chr1.4:30540928-30540947 | MS.gene064944:CDS | 20.0% |
| !! | ATTAATATGTGACAATAATG+TGG | - | chr1.4:30540588-30540607 | MS.gene064944:CDS | 20.0% |
| !!! | AATTTTGAAAAGTACTATGA+TGG | + | chr1.4:30540563-30540582 | None:intergenic | 20.0% |
| !!! | ATTTTGAAAAGTACTATGAT+GGG | + | chr1.4:30540562-30540581 | None:intergenic | 20.0% |
| ! | ACAAATTGAAAATCTGAAGA+GGG | - | chr1.4:30540750-30540769 | MS.gene064944:CDS | 25.0% |
| ! | ACTTCTACAAGAAGAAATAA+AGG | - | chr1.4:30539736-30539755 | MS.gene064944:CDS | 25.0% |
| ! | GAAGAAGTTGAAAATCAAAT+TGG | - | chr1.4:30540927-30540946 | MS.gene064944:CDS | 25.0% |
| ! | TACAAACAGTACTAATTGTT+TGG | + | chr1.4:30540461-30540480 | None:intergenic | 25.0% |
| ! | TACAAATTGAAAATCTGAAG+AGG | - | chr1.4:30540749-30540768 | MS.gene064944:CDS | 25.0% |
| !!! | AAAGCTTTAAAAGCTCAATT+AGG | - | chr1.4:30540799-30540818 | MS.gene064944:CDS | 25.0% |
| !!! | TTCTTCTCTTTAGTTTGAAT+TGG | + | chr1.4:30540910-30540929 | None:intergenic | 25.0% |
| AAAGGAGATAATGTGTGATA+GGG | - | chr1.4:30539754-30539773 | MS.gene064944:CDS | 30.0% | |
| TAAAGGAGATAATGTGTGAT+AGG | - | chr1.4:30539753-30539772 | MS.gene064944:CDS | 30.0% | |
| ! | AAGAAAGGTACAAACAAGAA+AGG | - | chr1.4:30540833-30540852 | MS.gene064944:CDS | 30.0% |
| ! | AGAAAGGTACAAACAAGAAA+GGG | - | chr1.4:30540834-30540853 | MS.gene064944:CDS | 30.0% |
| ! | TACTTGAGCTTATTTGCTTT+TGG | - | chr1.4:30540676-30540695 | MS.gene064944:CDS | 30.0% |
| !! | AAAGGGAATTTGACTTGTTA+AGG | - | chr1.4:30540851-30540870 | MS.gene064944:CDS | 30.0% |
| !! | GATAATGGTGTTTGCTTTTA+AGG | - | chr1.4:30539805-30539824 | MS.gene064944:CDS | 30.0% |
| AAAAGCTCAATTAGGTTCAG+TGG | - | chr1.4:30540807-30540826 | MS.gene064944:CDS | 35.0% | |
| AAGAGAAGGAAGAGAAGATA+AGG | - | chr1.4:30539894-30539913 | MS.gene064944:intron | 35.0% | |
| AGAAAGAGTGGGAATTAATG+GGG | - | chr1.4:30539954-30539973 | MS.gene064944:intron | 35.0% | |
| AGAAGAATTGTGAGAAAGAG+TGG | - | chr1.4:30539942-30539961 | MS.gene064944:intron | 35.0% | |
| AGAGAAGGAAGAGAAGATAA+GGG | - | chr1.4:30539895-30539914 | MS.gene064944:intron | 35.0% | |
| CAAAGTTTGAGGATCATGAA+TGG | - | chr1.4:30540874-30540893 | MS.gene064944:CDS | 35.0% | |
| CTCATCCAAAGAACATATGA+TGG | - | chr1.4:30540082-30540101 | MS.gene064944:intron | 35.0% | |
| GAAGAATTGTGAGAAAGAGT+GGG | - | chr1.4:30539943-30539962 | MS.gene064944:intron | 35.0% | |
| GAGAAAGAGTGGGAATTAAT+GGG | - | chr1.4:30539953-30539972 | MS.gene064944:intron | 35.0% | |
| GCTTACCATCATATGTTCTT+TGG | + | chr1.4:30540090-30540109 | None:intergenic | 35.0% | |
| TGAGAAAGAGTGGGAATTAA+TGG | - | chr1.4:30539952-30539971 | MS.gene064944:intron | 35.0% | |
| ! | ACTTGTTAAGGCAAAGTTTG+AGG | - | chr1.4:30540863-30540882 | MS.gene064944:CDS | 35.0% |
| ! | ATTAATGGGGACTAAGCTTT+TGG | - | chr1.4:30539967-30539986 | MS.gene064944:intron | 35.0% |
| !! | AATGGTGTTTGCTTTTAAGG+AGG | - | chr1.4:30539808-30539827 | MS.gene064944:CDS | 35.0% |
| !! | GCTTTTGGAAATATACTCAC+AGG | - | chr1.4:30540691-30540710 | MS.gene064944:CDS | 35.0% |
| AAAAGTAGTGTGTGGCAGAT+GGG | - | chr1.4:30540529-30540548 | MS.gene064944:CDS | 40.0% | |
| AAGAGAGTAGGAACTATGAG+AGG | - | chr1.4:30539780-30539799 | MS.gene064944:CDS | 40.0% | |
| AGAGAGTAGGAACTATGAGA+GGG | - | chr1.4:30539781-30539800 | MS.gene064944:CDS | 40.0% | |
| ATTGGAAACAAGAGGTGAAG+AGG | - | chr1.4:30539834-30539853 | MS.gene064944:CDS | 40.0% | |
| GAACTATGAGAGGGAGATAA+TGG | - | chr1.4:30539790-30539809 | MS.gene064944:CDS | 40.0% | |
| GGAAATATACTCACAGGAGA+TGG | - | chr1.4:30540697-30540716 | MS.gene064944:CDS | 40.0% | |
| TAGGTTCAGTGGAGAAAGAA+AGG | - | chr1.4:30540818-30540837 | MS.gene064944:CDS | 40.0% | |
| ! | TCACAGGAGATGGTTTGTAT+TGG | - | chr1.4:30540707-30540726 | MS.gene064944:CDS | 40.0% |
| ! | TGGTTTGTATTGGAAAGCTG+AGG | - | chr1.4:30540717-30540736 | MS.gene064944:CDS | 40.0% |
| ! | TTTGGTTCAAGAGATGAAGG+AGG | - | chr1.4:30539985-30540004 | MS.gene064944:intron | 40.0% |
| !! | GCCACACACTACTTTTCAAA+GGG | + | chr1.4:30540525-30540544 | None:intergenic | 40.0% |
| !! | TGCCACACACTACTTTTCAA+AGG | + | chr1.4:30540526-30540545 | None:intergenic | 40.0% |
| !! | TTGCTTTTAAGGAGGCAGAT+TGG | - | chr1.4:30539816-30539835 | MS.gene064944:CDS | 40.0% |
| !!! | GCTTTTGGTTCAAGAGATGA+AGG | - | chr1.4:30539982-30540001 | MS.gene064944:intron | 40.0% |
| AAAGTAGTGTGTGGCAGATG+GGG | - | chr1.4:30540530-30540549 | MS.gene064944:CDS | 45.0% | |
| AAGAAGAGGTGAAGCAGTTG+AGG | - | chr1.4:30539861-30539880 | MS.gene064944:CDS | 45.0% | |
| AGAAGAGGTGAAGCAGTTGA+GGG | - | chr1.4:30539862-30539881 | MS.gene064944:CDS | 45.0% | |
| AGATGAAGGAGGAAAGAGCA+AGG | - | chr1.4:30539996-30540015 | MS.gene064944:intron | 45.0% | |
| ATAAGGGAGATGGAAGAGGT+TGG | - | chr1.4:30539911-30539930 | MS.gene064944:intron | 45.0% | |
| GAAAAGTAGTGTGTGGCAGA+TGG | - | chr1.4:30540528-30540547 | MS.gene064944:CDS | 45.0% | |
| GAAGATAAGGGAGATGGAAG+AGG | - | chr1.4:30539907-30539926 | MS.gene064944:intron | 45.0% | |
| GAGATGAAGCTGTTGAGAAG+TGG | - | chr1.4:30540020-30540039 | MS.gene064944:intron | 45.0% | |
| GGAAGAGAAGATAAGGGAGA+TGG | - | chr1.4:30539901-30539920 | MS.gene064944:intron | 45.0% | |
| GGTGAAGAGGTTGAAAGAAG+AGG | - | chr1.4:30539847-30539866 | MS.gene064944:CDS | 45.0% | |
| GTGATAGGGAGAAAGAGAGT+AGG | - | chr1.4:30539768-30539787 | MS.gene064944:CDS | 45.0% | |
| ! | GCCCTTTGAAAAGTAGTGTG+TGG | - | chr1.4:30540521-30540540 | MS.gene064944:CDS | 45.0% |
| !!! | AAAATTAAATAAAATTCTTT+TGG | + | chr1.4:30540376-30540395 | None:intergenic | 5.0% |
| GGAGATGGAAGAGGTTGGAA+TGG | - | chr1.4:30539916-30539935 | MS.gene064944:intron | 50.0% | |
| GGAGGCAGATTGGAAACAAG+AGG | - | chr1.4:30539826-30539845 | MS.gene064944:CDS | 50.0% | |
| GAAGCAGTTGAGGGAAGTGG+TGG | - | chr1.4:30539871-30539890 | MS.gene064944:CDS | 55.0% | |
| GGTGAAGCAGTTGAGGGAAG+TGG | - | chr1.4:30539868-30539887 | MS.gene064944:CDS | 55.0% | |
| ! | GAGGGAAGTGGTGGAAGAGA+AGG | - | chr1.4:30539880-30539899 | MS.gene064944:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 30539653 | 30540957 | 30539653 | ID=MS.gene064944 |
| chr1.4 | mRNA | 30539653 | 30540957 | 30539653 | ID=MS.gene064944.t1;Parent=MS.gene064944 |
| chr1.4 | exon | 30540507 | 30540957 | 30540507 | ID=MS.gene064944.t1.exon1;Parent=MS.gene064944.t1 |
| chr1.4 | CDS | 30540507 | 30540957 | 30540507 | ID=cds.MS.gene064944.t1;Parent=MS.gene064944.t1 |
| chr1.4 | exon | 30539653 | 30539897 | 30539653 | ID=MS.gene064944.t1.exon2;Parent=MS.gene064944.t1 |
| chr1.4 | CDS | 30539653 | 30539897 | 30539653 | ID=cds.MS.gene064944.t1;Parent=MS.gene064944.t1 |
| Gene Sequence |
| Protein sequence |
