AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene30397


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30397.t1 MTR_8g020880 97.135 733 13 5 1 732 1 726 0.0 1461
MS.gene30397.t1 MTR_8g020880 96.672 631 13 5 1 630 1 624 0.0 1247
MS.gene30397.t1 MTR_7g108940 35.680 412 218 10 227 593 146 555 8.89e-63 225
MS.gene30397.t1 MTR_7g108940 35.680 412 218 10 227 593 146 555 1.84e-62 225
MS.gene30397.t1 MTR_5g007870 43.541 209 106 3 221 417 121 329 1.54e-37 151
MS.gene30397.t1 MTR_5g007870 50.394 127 54 2 443 560 446 572 2.04e-28 122
MS.gene30397.t1 MTR_4g123930 29.787 329 200 6 248 552 112 433 1.93e-34 137
MS.gene30397.t1 MTR_4g123930 29.846 325 197 6 252 552 116 433 2.27e-33 136
MS.gene30397.t1 MTR_4g123930 29.450 309 187 6 268 552 2 303 4.21e-32 127
MS.gene30397.t1 MTR_4g123930 29.450 309 187 6 268 552 2 303 1.54e-30 125
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30397.t1 AT3G14050 66.985 733 199 9 1 721 2 703 0.0 904
MS.gene30397.t1 AT1G54130 64.229 752 206 14 1 730 2 712 0.0 889
MS.gene30397.t1 AT4G02260 39.316 351 188 7 227 552 148 498 2.97e-60 218
MS.gene30397.t1 AT4G02260 39.316 351 188 7 227 552 148 498 5.66e-60 218
MS.gene30397.t1 AT4G02260 39.316 351 188 7 227 552 148 498 6.26e-60 218
MS.gene30397.t1 AT4G02260 39.205 352 188 8 227 552 148 499 2.21e-58 213
MS.gene30397.t1 AT3G17470 31.212 330 198 7 246 552 107 430 4.39e-37 145
MS.gene30397.t1 AT3G17470 31.212 330 198 7 246 552 122 445 4.09e-36 144
MS.gene30397.t1 AT3G17470 31.212 330 198 7 246 552 107 430 4.49e-36 144

Find 176 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATCTTCAACTTGCAATT+TGG 0.118666 8.1:-78538408 None:intergenic
ATTAACTATGATTTCGAATT+AGG 0.147309 8.1:+78535136 MS.gene30397:CDS
GATGATATCCATGACATTTA+TGG 0.178626 8.1:+78537365 MS.gene30397:CDS
CTTACTTATGATTATATATA+CGG 0.188737 8.1:+78536016 MS.gene30397:CDS
GATGGTGTTGGTGGTGATTC+TGG 0.210059 8.1:+78535598 MS.gene30397:CDS
ATGCATTTGCAAGCAGAATT+TGG 0.213922 8.1:+78537663 MS.gene30397:CDS
TGCTTTGGGTTCTTCTTGTT+TGG 0.222221 8.1:+78535522 MS.gene30397:CDS
TTGTGAAGAGTTTGTTATTA+AGG 0.223595 8.1:+78535741 MS.gene30397:CDS
ATTTCTTATCATGTCATTTC+TGG 0.239861 8.1:+78537075 MS.gene30397:CDS
TCGAGTTTGCACAAAATTCT+TGG 0.262479 8.1:-78538272 None:intergenic
TTGCAATTTGGATCACTTAC+AGG 0.265645 8.1:-78538396 None:intergenic
CTGAATTTCTTCCCTATATT+CGG 0.288112 8.1:-78538475 None:intergenic
GCGACGGCGGCGTCTACGTC+TGG 0.303823 8.1:+78535187 MS.gene30397:CDS
CTCGACAGTACTAGATTTGT+TGG 0.308633 8.1:+78538290 MS.gene30397:CDS
TAGAAGTTGTTCACCGGTTA+TGG 0.315278 8.1:+78537432 MS.gene30397:CDS
CAATCAGGCTTGTAAGAATA+TGG 0.320693 8.1:-78537873 None:intergenic
TCCGTATTTGCAGCATTGTT+TGG 0.330409 8.1:+78535907 MS.gene30397:CDS
GATTATATATACGGGATGTT+TGG 0.331195 8.1:+78536025 MS.gene30397:CDS
ACCGATTAGGAATAGCTAAT+TGG 0.332077 8.1:+78536908 MS.gene30397:CDS
AAGAGCTGTCCTCATTAAAT+TGG 0.336185 8.1:+78536786 MS.gene30397:CDS
CGACGAAGTTTGGTGGATCT+TGG 0.336434 8.1:+78535359 MS.gene30397:CDS
TCCAATTAGCTATTCCTAAT+CGG 0.340721 8.1:-78536909 None:intergenic
GCACCTTTGGCCAACCGATT+AGG 0.347291 8.1:+78536895 MS.gene30397:CDS
ACAAGTATCTGACCGAATAT+AGG 0.349388 8.1:+78538463 MS.gene30397:CDS
TTTGGAAACTGCTGTGTTGT+TGG 0.368793 8.1:+78535925 MS.gene30397:CDS
GGTGGTGGTGGTGAATTTGA+TGG 0.370524 8.1:+78535580 MS.gene30397:CDS
ATGATATCCATGACATTTAT+GGG 0.372392 8.1:+78537366 MS.gene30397:CDS
TGGGTTTGTGAGAAGTGCTT+TGG 0.378293 8.1:+78535507 MS.gene30397:CDS
ATCAACAACTTCTTAGCATA+AGG 0.384347 8.1:-78535691 None:intergenic
GAGAGATCATAGTCCAGTTT+CGG 0.385330 8.1:+78535384 MS.gene30397:CDS
GAAAGCTCTTTGTGCTGTAC+AGG 0.386440 8.1:-78536970 None:intergenic
ATTCTTACAAGCCTGATTGC+GGG 0.405333 8.1:+78537877 MS.gene30397:CDS
TAACCGGTGAACAACTTCTA+AGG 0.405585 8.1:-78537429 None:intergenic
CTTTGCAAACCTCTGCTGCT+TGG 0.408434 8.1:-78536854 None:intergenic
TTGTTCGAATTTGTACTTCA+AGG 0.408493 8.1:-78537635 None:intergenic
CCTCCCTGATCGAATTGTTC+CGG 0.409534 8.1:-78535458 None:intergenic
GGTCCATCCTGCCCGCAATC+AGG 0.410211 8.1:-78537888 None:intergenic
GATGACACTAGATGCATTAC+CGG 0.413123 8.1:+78536828 MS.gene30397:CDS
GGCGTCTACGTCTGGGAAAT+CGG 0.414943 8.1:+78535195 MS.gene30397:CDS
GGTGGTGAATTTGATGGTGT+TGG 0.416217 8.1:+78535586 MS.gene30397:CDS
GGGTTTGTGAGAAGTGCTTT+GGG 0.417938 8.1:+78535508 MS.gene30397:CDS
GGAGTTGCTGATTTAGTTGA+AGG 0.421830 8.1:+78536052 MS.gene30397:CDS
TCCAAACAATGCTGCAAATA+CGG 0.422488 8.1:-78535908 None:intergenic
CAAGTATCTGACCGAATATA+GGG 0.424375 8.1:+78538464 MS.gene30397:CDS
GAGGTTTGCAAAGGAAACTT+TGG 0.428632 8.1:+78536864 MS.gene30397:CDS
AACCTCTGCTGCTTGGCAAC+CGG 0.433003 8.1:-78536847 None:intergenic
ATGGGTGCCGGTGCGGGTAC+CGG 0.442415 8.1:+78535439 MS.gene30397:CDS
ATCTCTGCACACTGTGGTGA+TGG 0.443111 8.1:+78537596 MS.gene30397:CDS
AGTAAAGATTCCACTTCTGT+TGG 0.443308 8.1:+78537795 MS.gene30397:CDS
TGTTTGGATTATGATTCTAC+TGG 0.445310 8.1:+78535538 MS.gene30397:CDS
AATTTGGATTCGCTGCTCAT+TGG 0.445751 8.1:+78537679 MS.gene30397:CDS
TCCAAATTGCAAGTTGAAGA+TGG 0.447857 8.1:+78538407 MS.gene30397:CDS
CATGCACCTCAGACCATAAC+CGG 0.449375 8.1:-78537445 None:intergenic
ACAGGCTTGTGATTCAGTCT+TGG 0.449925 8.1:-78538378 None:intergenic
TACAACATACCCATTGAACT+TGG 0.450219 8.1:-78537495 None:intergenic
ATGCTACTACTACACGAAAC+AGG 0.451567 8.1:-78535418 None:intergenic
AATTCAACAGTAGTTGCTGC+TGG 0.454268 8.1:+78535962 MS.gene30397:CDS
ATACATTGCCCCAAGTTCAA+TGG 0.454579 8.1:+78537485 MS.gene30397:CDS
ACTCATTGCTTCGCACTGCC+AGG 0.456952 8.1:-78537775 None:intergenic
TAGATTTGTTGGAGAGGGTC+GGG 0.457657 8.1:+78538301 MS.gene30397:CDS
TGGTGGTGATTCTGGAATTG+TGG 0.457934 8.1:+78535606 MS.gene30397:CDS
ATCTTCGTCACCGGCGTCTA+CGG 0.466938 8.1:+78535165 MS.gene30397:CDS
TTGGATTCGCTGCTCATTGG+AGG 0.470246 8.1:+78537682 MS.gene30397:CDS
AGTAGCATGGGTGCCGGTGC+GGG 0.474221 8.1:+78535433 MS.gene30397:CDS
TACGTCTGGGAAATCGGTGA+TGG 0.474358 8.1:+78535201 MS.gene30397:CDS
TACATTGCCCCAAGTTCAAT+GGG 0.477235 8.1:+78537486 MS.gene30397:CDS
GCTGTGTTGTTGGCTTTGAT+CGG 0.482957 8.1:+78535935 MS.gene30397:CDS
GCCTCAATTCTTCCTTCAGA+GGG 0.483136 8.1:-78538356 None:intergenic
CGATCAGGGAGGGGAAGTAC+TGG 0.484040 8.1:+78535469 MS.gene30397:CDS
GGTACCGGAACAATTCGATC+AGG 0.485761 8.1:+78535454 MS.gene30397:CDS
TGTTCGAATTTGTACTTCAA+GGG 0.486391 8.1:-78537634 None:intergenic
GCTGCGCTTGATTGTTGATA+AGG 0.487554 8.1:+78537388 MS.gene30397:CDS
AGCTTTCTCAGCTTCACAAA+AGG 0.487843 8.1:-78535764 None:intergenic
AGATTACGCGGTGGTGGTGG+TGG 0.491666 8.1:+78535565 MS.gene30397:CDS
GGGAGGGGAAGTACTGGTGG+TGG 0.494745 8.1:+78535475 MS.gene30397:CDS
GGGCTCGATGGGTTGTCACC+TGG 0.495606 8.1:+78537757 MS.gene30397:CDS
GTTAGATTACGCGGTGGTGG+TGG 0.504725 8.1:+78535562 MS.gene30397:CDS
AGATACTTGTCAGGTATGGC+TGG 0.505901 8.1:-78538450 None:intergenic
AGAGCTTTCGTCAAAGCTTG+TGG 0.510991 8.1:+78536984 MS.gene30397:CDS
TTACTTATGATTATATATAC+GGG 0.511289 8.1:+78536017 MS.gene30397:CDS
TTACGCGGTGGTGGTGGTGG+TGG 0.511301 8.1:+78535568 MS.gene30397:CDS
TATTCGGTCAGATACTTGTC+AGG 0.512446 8.1:-78538459 None:intergenic
ATCTTCATCACCACCACCAC+CGG 0.515186 8.1:-78535293 None:intergenic
CGCTGCTCATTGGAGGTACA+AGG 0.516170 8.1:+78537689 MS.gene30397:CDS
TTCTTCATATGTGCTTCAGA+TGG 0.516537 8.1:+78537728 MS.gene30397:CDS
GGTGAATTTGATGGTGTTGG+TGG 0.516562 8.1:+78535589 MS.gene30397:CDS
CGGTTATGGTCTGAGGTGCA+TGG 0.519568 8.1:+78537446 MS.gene30397:CDS
CTAGATTTGTTGGAGAGGGT+CGG 0.525008 8.1:+78538300 MS.gene30397:CDS
TTACAAGCCTGATTGCGGGC+AGG 0.526518 8.1:+78537881 MS.gene30397:CDS
GGAGGGGAAGTACTGGTGGT+GGG 0.527525 8.1:+78535476 MS.gene30397:CDS
GGCCTCAATTCTTCCTTCAG+AGG 0.533475 8.1:-78538357 None:intergenic
TGAGAAAGCTCATAGAGGAC+AGG 0.534366 8.1:+78535777 MS.gene30397:CDS
TGGTGATGAAGATGAATTGA+AGG 0.535373 8.1:+78535303 MS.gene30397:CDS
ACAACATACCCATTGAACTT+GGG 0.535483 8.1:-78537494 None:intergenic
GTCACCGGCGTCTACGGCGA+CGG 0.537490 8.1:+78535171 MS.gene30397:CDS
AGATGGTTGAGTGGGCTCGA+TGG 0.537950 8.1:+78537745 MS.gene30397:CDS
GATGGTTGAGTGGGCTCGAT+GGG 0.540134 8.1:+78537746 MS.gene30397:CDS
CGGGCTAACTGTATCAAGCA+TGG 0.545579 8.1:+78538512 MS.gene30397:CDS
AACATATAGGTTCCCTCTGA+AGG 0.546405 8.1:+78538344 MS.gene30397:CDS
GACAGTTATCAGCATGAGAA+GGG 0.546477 8.1:-78537851 None:intergenic
TGTTTCGTGTAGTAGTAGCA+TGG 0.546500 8.1:+78535420 MS.gene30397:CDS
ATCGACAAATCCAACAGAAG+TGG 0.547140 8.1:-78537805 None:intergenic
ATATACGGGATGTTTGGAGC+TGG 0.549390 8.1:+78536031 MS.gene30397:CDS
CCAAATTGCAAGTTGAAGAT+GGG 0.550752 8.1:+78538408 MS.gene30397:CDS
AATTGTTCCGGTACCCGCAC+CGG 0.551906 8.1:-78535446 None:intergenic
ATTAGCTATTCCTAATCGGT+TGG 0.552553 8.1:-78536905 None:intergenic
CTCTTGCATCTGCCATTGCA+AGG 0.553256 8.1:-78536768 None:intergenic
TTGCAAGGAACATTGTATGC+AGG 0.553528 8.1:-78536753 None:intergenic
GAGCAAGCACTCAAAGATGA+AGG 0.553848 8.1:+78537051 MS.gene30397:CDS
GCATACAATGTTCCTTGCAA+TGG 0.556040 8.1:+78536756 MS.gene30397:CDS
ACGTCTGGGAAATCGGTGAT+GGG 0.557642 8.1:+78535202 MS.gene30397:CDS
ATTCAACAGTAGTTGCTGCT+GGG 0.558656 8.1:+78535963 MS.gene30397:CDS
TAGTAGCATGGGTGCCGGTG+CGG 0.559495 8.1:+78535432 MS.gene30397:CDS
AAGCCTGATTGCGGGCAGGA+TGG 0.560710 8.1:+78537885 MS.gene30397:CDS
TATTCTTACAAGCCTGATTG+CGG 0.560842 8.1:+78537876 MS.gene30397:CDS
GCTACTGCAAGCAGCATGGT+TGG 0.562551 8.1:+78538543 MS.gene30397:CDS
GGTCAGATACTTGTCAGGTA+TGG 0.563602 8.1:-78538454 None:intergenic
AGCGCAGCCCATAAATGTCA+TGG 0.564123 8.1:-78537373 None:intergenic
TACCGGTTGCCAAGCAGCAG+AGG 0.564469 8.1:+78536845 MS.gene30397:CDS
GGAACAATTCGATCAGGGAG+GGG 0.565296 8.1:+78535460 MS.gene30397:CDS
CGACGGCGGCGTCTACGTCT+GGG 0.569402 8.1:+78535188 MS.gene30397:CDS
CTTATCATGTCATTTCTGGA+CGG 0.571086 8.1:+78537079 MS.gene30397:CDS
CAACATACCCATTGAACTTG+GGG 0.571860 8.1:-78537493 None:intergenic
GGACAGTTATCAGCATGAGA+AGG 0.573734 8.1:-78537852 None:intergenic
GCTGTAGGTTGACAACATAT+AGG 0.573805 8.1:+78538331 MS.gene30397:CDS
TGTTCACCGGTTATGGTCTG+AGG 0.575398 8.1:+78537439 MS.gene30397:CDS
GAGTTGCTGATTTAGTTGAA+GGG 0.580287 8.1:+78536053 MS.gene30397:CDS
TCTCTGCACACTGTGGTGAT+GGG 0.580339 8.1:+78537597 MS.gene30397:CDS
ATCGATCAGCCAATTTAATG+AGG 0.581475 8.1:-78536795 None:intergenic
GTTTCGTGTAGTAGTAGCAT+GGG 0.582976 8.1:+78535421 MS.gene30397:CDS
AAGCCTTAGAAGTTGTTCAC+CGG 0.583932 8.1:+78537426 MS.gene30397:CDS
GGGTCGGGCGAGCAAGCTGT+AGG 0.584040 8.1:+78538316 MS.gene30397:CDS
ACTGAGTCACTTAAGCAAGC+TGG 0.586111 8.1:+78536687 MS.gene30397:CDS
AGTACTAGATTTGTTGGAGA+GGG 0.591903 8.1:+78538296 MS.gene30397:CDS
CGGAACAATTCGATCAGGGA+GGG 0.592758 8.1:+78535459 MS.gene30397:CDS
GGTTATGGTCTGAGGTGCAT+GGG 0.593196 8.1:+78537447 MS.gene30397:CDS
CACACTGTGGTGATGGGTGA+AGG 0.596315 8.1:+78537603 MS.gene30397:CDS
AAAGCTCTTTGTGCTGTACA+GGG 0.599815 8.1:-78536969 None:intergenic
GGTGTAGAACACACACTACT+CGG 0.601489 8.1:-78535106 None:intergenic
ATTAGGAATAGCTAATTGGA+AGG 0.601826 8.1:+78536912 MS.gene30397:CDS
TTCAGCGAATGTATGATCGC+GGG 0.602849 8.1:+78538493 MS.gene30397:CDS
GCGCTTGATTGTTGATAAGG+AGG 0.603331 8.1:+78537391 MS.gene30397:CDS
TGTAGTAGTAGCATGGGTGC+CGG 0.604049 8.1:+78535427 MS.gene30397:CDS
GTTCGAATTTGTACTTCAAG+GGG 0.605083 8.1:-78537633 None:intergenic
ATTCCTAATCGGTTGGCCAA+AGG 0.606063 8.1:-78536898 None:intergenic
CAAGCAGCAGAGGTTTGCAA+AGG 0.607809 8.1:+78536855 MS.gene30397:CDS
GCATGAGAAGGGAACTTGCA+AGG 0.608349 8.1:-78537840 None:intergenic
TCAGGGAGGGGAAGTACTGG+TGG 0.609082 8.1:+78535472 MS.gene30397:CDS
TGTGCTTCAGATGGTTGAGT+GGG 0.610056 8.1:+78537737 MS.gene30397:CDS
ATGTGCTTCAGATGGTTGAG+TGG 0.615998 8.1:+78537736 MS.gene30397:CDS
AGGATCTAGATCTTCGTCAC+CGG 0.616184 8.1:+78535156 MS.gene30397:CDS
GGGCTAACTGTATCAAGCAT+GGG 0.621683 8.1:+78538513 MS.gene30397:CDS
TGTGGTGATGGGTGAAGGCA+AGG 0.624487 8.1:+78537608 MS.gene30397:CDS
TACTGCTACTGCAAGCAGCA+TGG 0.624524 8.1:+78538539 MS.gene30397:CDS
GGTGTTAGATTACGCGGTGG+TGG 0.624885 8.1:+78535559 MS.gene30397:CDS
GCCGCCGTCGCCGTAGACGC+CGG 0.625619 8.1:-78535175 None:intergenic
AAATCATAGTTAATCTGATG+CGG 0.628203 8.1:-78535127 None:intergenic
TCCCTCTGAAGGAAGAATTG+AGG 0.628438 8.1:+78538355 MS.gene30397:CDS
CAAGATCCACCAAACTTCGT+CGG 0.628498 8.1:-78535358 None:intergenic
TCTGGGAAATCGGTGATGGG+TGG 0.638476 8.1:+78535205 MS.gene30397:CDS
CAGTACTAGATTTGTTGGAG+AGG 0.642485 8.1:+78538295 MS.gene30397:CDS
TGTTTGTAGATGCGAGCTAG+TGG 0.645770 8.1:+78535881 MS.gene30397:intron
GAAGCTGAGAAAGCTCATAG+AGG 0.646306 8.1:+78535772 MS.gene30397:CDS
TCTACTGGTGTTAGATTACG+CGG 0.646568 8.1:+78535553 MS.gene30397:CDS
AGTTGCTGATTTAGTTGAAG+GGG 0.648111 8.1:+78536054 MS.gene30397:CDS
ACCGGCGTCTACGGCGACGG+CGG 0.651192 8.1:+78535174 MS.gene30397:CDS
ACATGCTGCTTCACCACCGT+CGG 0.651198 8.1:-78535250 None:intergenic
TCAATCATGATAACAAACAC+AGG 0.655763 8.1:-78537909 None:intergenic
CAAGGAACATTGTATGCAGG+CGG 0.659437 8.1:-78536750 None:intergenic
GTACCGGAACAATTCGATCA+GGG 0.659700 8.1:+78535455 MS.gene30397:CDS
ATTCAGCGAATGTATGATCG+CGG 0.666404 8.1:+78538492 MS.gene30397:CDS
CCGGAACAATTCGATCAGGG+AGG 0.701868 8.1:+78535458 MS.gene30397:CDS
TATCATGATTGAGAATGACA+AGG 0.707357 8.1:+78537920 MS.gene30397:CDS
GTAGAACACACACTACTCGG+TGG 0.713186 8.1:-78535103 None:intergenic
ACTGGTGTTAGATTACGCGG+TGG 0.729692 8.1:+78535556 MS.gene30397:CDS
TTATCAATCTCTGCACACTG+TGG 0.751179 8.1:+78537590 MS.gene30397:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTACTTATGATTATATATA+CGG + chr8.1:78536016-78536035 MS.gene30397:CDS 15.0%
!! TTACTTATGATTATATATAC+GGG + chr8.1:78536017-78536036 MS.gene30397:CDS 15.0%
!!! AGAATTATGTTCAATATTTT+GGG + chr8.1:78537951-78537970 MS.gene30397:intron 15.0%
!!! TAGAATTATGTTCAATATTT+TGG + chr8.1:78537950-78537969 MS.gene30397:intron 15.0%
!! ATAAATAATGAAATGAAAGC+AGG - chr8.1:78538002-78538021 None:intergenic 20.0%
!! ATTAACTATGATTTCGAATT+AGG + chr8.1:78535136-78535155 MS.gene30397:CDS 20.0%
!!! TTTAAGATTAAGATGATTGA+TGG + chr8.1:78536117-78536136 MS.gene30397:intron 20.0%
! AAACAGGAAACTGTTAAATT+AGG + chr8.1:78538100-78538119 MS.gene30397:intron 25.0%
! AAATCATAGTTAATCTGATG+CGG - chr8.1:78535130-78535149 None:intergenic 25.0%
! AACAGGAAACTGTTAAATTA+GGG + chr8.1:78538101-78538120 MS.gene30397:intron 25.0%
! AATGACAATTCAAATCCATT+AGG + chr8.1:78536370-78536389 MS.gene30397:intron 25.0%
! ATGATATCCATGACATTTAT+GGG + chr8.1:78537366-78537385 MS.gene30397:CDS 25.0%
! CAAATCTATCATAAAAAGCT+AGG - chr8.1:78536418-78536437 None:intergenic 25.0%
! CAACCACAATACAAATTAAT+CGG - chr8.1:78536546-78536565 None:intergenic 25.0%
! GAAAACAAGTGTTAAAACAA+AGG - chr8.1:78538043-78538062 None:intergenic 25.0%
! TAAATCAGATGATATAGAGA+CGG - chr8.1:78537553-78537572 None:intergenic 25.0%
! TAATAACTACAAACATCAAG+AGG - chr8.1:78536338-78536357 None:intergenic 25.0%
! TTGTACAGATATTTGAAAAC+AGG + chr8.1:78538084-78538103 MS.gene30397:intron 25.0%
!! ATTTCTTATCATGTCATTTC+TGG + chr8.1:78537075-78537094 MS.gene30397:CDS 25.0%
!! TAATTTGGATGATACTTTTG+TGG + chr8.1:78535642-78535661 MS.gene30397:CDS 25.0%
!! TTATGTGTGTTTGTGATTTT+TGG + chr8.1:78535817-78535836 MS.gene30397:intron 25.0%
!! TTTGAAGTGTGCAAATAATA+TGG - chr8.1:78537296-78537315 None:intergenic 25.0%
!! TTTTTGTATTGCTAGTGATT+TGG + chr8.1:78536491-78536510 MS.gene30397:intron 25.0%
!!! AAACCGATTAATTTGTATTG+TGG + chr8.1:78536540-78536559 MS.gene30397:intron 25.0%
!!! TTCAATATTTTGGGTTTAGT+TGG + chr8.1:78537960-78537979 MS.gene30397:intron 25.0%
!!! TTCGGTGTTAATCAATAATT+GGG + chr8.1:78536089-78536108 MS.gene30397:intron 25.0%
!!! TTGTGAAGAGTTTGTTATTA+AGG + chr8.1:78535741-78535760 MS.gene30397:CDS 25.0%
!!! TTTCGGTGTTAATCAATAAT+TGG + chr8.1:78536088-78536107 MS.gene30397:intron 25.0%
!!! TTTTTTATCTCAAACCAAAC+AGG + chr8.1:78538157-78538176 MS.gene30397:intron 25.0%
AACATGCAATGCAAATCAAA+AGG - chr8.1:78536151-78536170 None:intergenic 30.0%
ACAGGAAACTGTTAAATTAG+GGG + chr8.1:78538102-78538121 MS.gene30397:intron 30.0%
AGCTTATTGCATAAACCTAA+TGG - chr8.1:78536388-78536407 None:intergenic 30.0%
ATAATATGGTGCATAATGTC+AGG - chr8.1:78537282-78537301 None:intergenic 30.0%
ATCAACAACTTCTTAGCATA+AGG - chr8.1:78535694-78535713 None:intergenic 30.0%
ATTAGGAATAGCTAATTGGA+AGG + chr8.1:78536912-78536931 MS.gene30397:CDS 30.0%
CTGAATTTCTTCCCTATATT+CGG - chr8.1:78538478-78538497 None:intergenic 30.0%
GATGATATCCATGACATTTA+TGG + chr8.1:78537365-78537384 MS.gene30397:CDS 30.0%
GATTATATATACGGGATGTT+TGG + chr8.1:78536025-78536044 MS.gene30397:CDS 30.0%
TATACACTTCATGAAACCAA+AGG - chr8.1:78538183-78538202 None:intergenic 30.0%
TATCATGATTGAGAATGACA+AGG + chr8.1:78537920-78537939 MS.gene30397:CDS 30.0%
TATGTTATGTGTTTGTCAAG+TGG + chr8.1:78536447-78536466 MS.gene30397:intron 30.0%
TCAATCATGATAACAAACAC+AGG - chr8.1:78537912-78537931 None:intergenic 30.0%
TCATTTGTCTACATATTTGC+AGG + chr8.1:78537327-78537346 MS.gene30397:intron 30.0%
TCCAATTAGCTATTCCTAAT+CGG - chr8.1:78536912-78536931 None:intergenic 30.0%
TGTTCGAATTTGTACTTCAA+GGG - chr8.1:78537637-78537656 None:intergenic 30.0%
TGTTTGGATTATGATTCTAC+TGG + chr8.1:78535538-78535557 MS.gene30397:CDS 30.0%
TTGTTCGAATTTGTACTTCA+AGG - chr8.1:78537638-78537657 None:intergenic 30.0%
!! CGATTAATTTGTATTGTGGT+TGG + chr8.1:78536544-78536563 MS.gene30397:intron 30.0%
!! GGATGAGTTGACTTTTAATT+TGG + chr8.1:78535627-78535646 MS.gene30397:CDS 30.0%
!!! AGTGATTTGGCTTTTTTGTA+TGG + chr8.1:78536504-78536523 MS.gene30397:intron 30.0%
AAGAGCTGTCCTCATTAAAT+TGG + chr8.1:78536786-78536805 MS.gene30397:CDS 35.0%
ACAACATACCCATTGAACTT+GGG - chr8.1:78537497-78537516 None:intergenic 35.0%
ACAAGTATCTGACCGAATAT+AGG + chr8.1:78538463-78538482 MS.gene30397:CDS 35.0%
ACCGATTAGGAATAGCTAAT+TGG + chr8.1:78536908-78536927 MS.gene30397:CDS 35.0%
ACTATCATTCTGTCTGATTC+TGG + chr8.1:78538233-78538252 MS.gene30397:intron 35.0%
AGTAAAGATTCCACTTCTGT+TGG + chr8.1:78537795-78537814 MS.gene30397:CDS 35.0%
ATCGATCAGCCAATTTAATG+AGG - chr8.1:78536798-78536817 None:intergenic 35.0%
ATGCATTTGCAAGCAGAATT+TGG + chr8.1:78537663-78537682 MS.gene30397:CDS 35.0%
ATTAGCTATTCCTAATCGGT+TGG - chr8.1:78536908-78536927 None:intergenic 35.0%
CAAGTATCTGACCGAATATA+GGG + chr8.1:78538464-78538483 MS.gene30397:CDS 35.0%
CAATCAGGCTTGTAAGAATA+TGG - chr8.1:78537876-78537895 None:intergenic 35.0%
GCTTCAAGAATCTAACTGAT+TGG + chr8.1:78536643-78536662 MS.gene30397:intron 35.0%
GGTATGTTGTAGCTCAATAA+TGG + chr8.1:78537507-78537526 MS.gene30397:intron 35.0%
GTTCGAATTTGTACTTCAAG+GGG - chr8.1:78537636-78537655 None:intergenic 35.0%
TACAACATACCCATTGAACT+TGG - chr8.1:78537498-78537517 None:intergenic 35.0%
TATTCTTACAAGCCTGATTG+CGG + chr8.1:78537876-78537895 MS.gene30397:CDS 35.0%
TCCAAACAATGCTGCAAATA+CGG - chr8.1:78535911-78535930 None:intergenic 35.0%
TCGAGTTTGCACAAAATTCT+TGG - chr8.1:78538275-78538294 None:intergenic 35.0%
TTACCTTTCCCTCTTTCATT+TGG + chr8.1:78537147-78537166 MS.gene30397:intron 35.0%
TTCTTCATATGTGCTTCAGA+TGG + chr8.1:78537728-78537747 MS.gene30397:CDS 35.0%
TTGCAATTTGGATCACTTAC+AGG - chr8.1:78538399-78538418 None:intergenic 35.0%
! ATTGTGGTTGGCATTTTTGT+AGG + chr8.1:78536556-78536575 MS.gene30397:intron 35.0%
! CCAAATTGCAAGTTGAAGAT+GGG + chr8.1:78538408-78538427 MS.gene30397:CDS 35.0%
! CTTATCATGTCATTTCTGGA+CGG + chr8.1:78537079-78537098 MS.gene30397:CDS 35.0%
! TCCAAATTGCAAGTTGAAGA+TGG + chr8.1:78538407-78538426 MS.gene30397:CDS 35.0%
! TGGTGATGAAGATGAATTGA+AGG + chr8.1:78535303-78535322 MS.gene30397:CDS 35.0%
! TTGGATGATACTTTTGTGGA+GGG + chr8.1:78535646-78535665 MS.gene30397:CDS 35.0%
! TTTGGAGATTTTTGCACCTT+TGG + chr8.1:78536882-78536901 MS.gene30397:CDS 35.0%
! TTTGGATGATACTTTTGTGG+AGG + chr8.1:78535645-78535664 MS.gene30397:CDS 35.0%
!! ACTGATTGGTATGCTATTTC+AGG + chr8.1:78536657-78536676 MS.gene30397:intron 35.0%
!! AGTACTAGATTTGTTGGAGA+GGG + chr8.1:78538296-78538315 MS.gene30397:CDS 35.0%
!! AGTTGCTGATTTAGTTGAAG+GGG + chr8.1:78536054-78536073 MS.gene30397:CDS 35.0%
!! CCTTTTACTTCGAGTTTTTC+CGG + chr8.1:78535274-78535293 MS.gene30397:CDS 35.0%
!! GAGTTGCTGATTTAGTTGAA+GGG + chr8.1:78536053-78536072 MS.gene30397:CDS 35.0%
!!! AAGGGGTGAGGAATTTTTTT+CGG + chr8.1:78536071-78536090 MS.gene30397:intron 35.0%
AAAGCTCTTTGTGCTGTACA+GGG - chr8.1:78536972-78536991 None:intergenic 40.0%
AACATATAGGTTCCCTCTGA+AGG + chr8.1:78538344-78538363 MS.gene30397:CDS 40.0%
AAGCCTTAGAAGTTGTTCAC+CGG + chr8.1:78537426-78537445 MS.gene30397:CDS 40.0%
AATTCAACAGTAGTTGCTGC+TGG + chr8.1:78535962-78535981 MS.gene30397:CDS 40.0%
AATTTGGATTCGCTGCTCAT+TGG + chr8.1:78537679-78537698 MS.gene30397:CDS 40.0%
AGCTTTCTCAGCTTCACAAA+AGG - chr8.1:78535767-78535786 None:intergenic 40.0%
AGTGACCATCCAAATGAAAG+AGG - chr8.1:78537159-78537178 None:intergenic 40.0%
ATACATTGCCCCAAGTTCAA+TGG + chr8.1:78537485-78537504 MS.gene30397:CDS 40.0%
ATCGACAAATCCAACAGAAG+TGG - chr8.1:78537808-78537827 None:intergenic 40.0%
ATGCTACTACTACACGAAAC+AGG - chr8.1:78535421-78535440 None:intergenic 40.0%
ATGTCTTCCACCAATTGTTC+GGG + chr8.1:78536257-78536276 MS.gene30397:intron 40.0%
ATTCAACAGTAGTTGCTGCT+GGG + chr8.1:78535963-78535982 MS.gene30397:CDS 40.0%
ATTCAGCGAATGTATGATCG+CGG + chr8.1:78538492-78538511 MS.gene30397:CDS 40.0%
ATTCTTACAAGCCTGATTGC+GGG + chr8.1:78537877-78537896 MS.gene30397:CDS 40.0%
CAACATACCCATTGAACTTG+GGG - chr8.1:78537496-78537515 None:intergenic 40.0%
CATCCAAATGAAAGAGGGAA+AGG - chr8.1:78537153-78537172 None:intergenic 40.0%
CCCATCTTCAACTTGCAATT+TGG - chr8.1:78538411-78538430 None:intergenic 40.0%
CCGGAAAAACTCGAAGTAAA+AGG - chr8.1:78535277-78535296 None:intergenic 40.0%
CTCGACAGTACTAGATTTGT+TGG + chr8.1:78538290-78538309 MS.gene30397:CDS 40.0%
CTTTCCCTCTTTCATTTGGA+TGG + chr8.1:78537151-78537170 MS.gene30397:intron 40.0%
GACAGTTATCAGCATGAGAA+GGG - chr8.1:78537854-78537873 None:intergenic 40.0%
GAGAGATCATAGTCCAGTTT+CGG + chr8.1:78535384-78535403 MS.gene30397:CDS 40.0%
GAGGTTTGCAAAGGAAACTT+TGG + chr8.1:78536864-78536883 MS.gene30397:CDS 40.0%
GATGACACTAGATGCATTAC+CGG + chr8.1:78536828-78536847 MS.gene30397:CDS 40.0%
GATGTCTTCCACCAATTGTT+CGG + chr8.1:78536256-78536275 MS.gene30397:intron 40.0%
GCATACAATGTTCCTTGCAA+TGG + chr8.1:78536756-78536775 MS.gene30397:CDS 40.0%
GTGACCATCCAAATGAAAGA+GGG - chr8.1:78537158-78537177 None:intergenic 40.0%
GTTTCGTGTAGTAGTAGCAT+GGG + chr8.1:78535421-78535440 MS.gene30397:CDS 40.0%
TAACCGGTGAACAACTTCTA+AGG - chr8.1:78537432-78537451 None:intergenic 40.0%
TACATTGCCCCAAGTTCAAT+GGG + chr8.1:78537486-78537505 MS.gene30397:CDS 40.0%
TATTCGGTCAGATACTTGTC+AGG - chr8.1:78538462-78538481 None:intergenic 40.0%
TCCGTATTTGCAGCATTGTT+TGG + chr8.1:78535907-78535926 MS.gene30397:CDS 40.0%
TGTTTCGTGTAGTAGTAGCA+TGG + chr8.1:78535420-78535439 MS.gene30397:CDS 40.0%
TTATCAATCTCTGCACACTG+TGG + chr8.1:78537590-78537609 MS.gene30397:CDS 40.0%
TTGCAAGGAACATTGTATGC+AGG - chr8.1:78536756-78536775 None:intergenic 40.0%
TTTGGAAACTGCTGTGTTGT+TGG + chr8.1:78535925-78535944 MS.gene30397:CDS 40.0%
! GCTGTAGGTTGACAACATAT+AGG + chr8.1:78538331-78538350 MS.gene30397:CDS 40.0%
! TAGAAGTTGTTCACCGGTTA+TGG + chr8.1:78537432-78537451 MS.gene30397:CDS 40.0%
! TCATTTTCACCGACGAAGTT+TGG + chr8.1:78535349-78535368 MS.gene30397:CDS 40.0%
! TCTACTGGTGTTAGATTACG+CGG + chr8.1:78535553-78535572 MS.gene30397:CDS 40.0%
! TGCTTTGGGTTCTTCTTGTT+TGG + chr8.1:78535522-78535541 MS.gene30397:CDS 40.0%
!! CAGTACTAGATTTGTTGGAG+AGG + chr8.1:78538295-78538314 MS.gene30397:CDS 40.0%
!! GGAGTTGCTGATTTAGTTGA+AGG + chr8.1:78536052-78536071 MS.gene30397:CDS 40.0%
!! GTGTTTGTTTTCATCTCCGA+CGG + chr8.1:78535234-78535253 MS.gene30397:CDS 40.0%
!! TTTACTTCGAGTTTTTCCGG+TGG + chr8.1:78535277-78535296 MS.gene30397:CDS 40.0%
AATTGTTCGGGGTACATCTC+TGG + chr8.1:78536269-78536288 MS.gene30397:intron 45.0%
ACAGGCTTGTGATTCAGTCT+TGG - chr8.1:78538381-78538400 None:intergenic 45.0%
ACTGAGTCACTTAAGCAAGC+TGG + chr8.1:78536687-78536706 MS.gene30397:CDS 45.0%
AGAGATGTACCCCGAACAAT+TGG - chr8.1:78536270-78536289 None:intergenic 45.0%
AGAGCTTTCGTCAAAGCTTG+TGG + chr8.1:78536984-78537003 MS.gene30397:CDS 45.0%
AGATACTTGTCAGGTATGGC+TGG - chr8.1:78538453-78538472 None:intergenic 45.0%
AGGATCTAGATCTTCGTCAC+CGG + chr8.1:78535156-78535175 MS.gene30397:CDS 45.0%
ATGTGCTTCAGATGGTTGAG+TGG + chr8.1:78537736-78537755 MS.gene30397:CDS 45.0%
CAAGATCCACCAAACTTCGT+CGG - chr8.1:78535361-78535380 None:intergenic 45.0%
CAAGGAACATTGTATGCAGG+CGG - chr8.1:78536753-78536772 None:intergenic 45.0%
CATGAAACCAAAGGCCTGTT+TGG - chr8.1:78538174-78538193 None:intergenic 45.0%
CTGATTTAGTTGAAGGGGTG+AGG + chr8.1:78536059-78536078 MS.gene30397:intron 45.0%
GAAAGCTCTTTGTGCTGTAC+AGG - chr8.1:78536973-78536992 None:intergenic 45.0%
GAAGCTGAGAAAGCTCATAG+AGG + chr8.1:78535772-78535791 MS.gene30397:CDS 45.0%
GAGCAAGCACTCAAAGATGA+AGG + chr8.1:78537051-78537070 MS.gene30397:CDS 45.0%
GCCTCAATTCTTCCTTCAGA+GGG - chr8.1:78538359-78538378 None:intergenic 45.0%
GCTGCGCTTGATTGTTGATA+AGG + chr8.1:78537388-78537407 MS.gene30397:CDS 45.0%
GGACACTGAAAAACCGAAAC+TGG - chr8.1:78535400-78535419 None:intergenic 45.0%
GGACAGTTATCAGCATGAGA+AGG - chr8.1:78537855-78537874 None:intergenic 45.0%
GGGCTAACTGTATCAAGCAT+GGG + chr8.1:78538513-78538532 MS.gene30397:CDS 45.0%
GGTCAGATACTTGTCAGGTA+TGG - chr8.1:78538457-78538476 None:intergenic 45.0%
GGTGTAGAACACACACTACT+CGG - chr8.1:78535109-78535128 None:intergenic 45.0%
GTACCGGAACAATTCGATCA+GGG + chr8.1:78535455-78535474 MS.gene30397:CDS 45.0%
TCTCAAACCAAACAGGCCTT+TGG + chr8.1:78538164-78538183 MS.gene30397:intron 45.0%
TGAGAAAGCTCATAGAGGAC+AGG + chr8.1:78535777-78535796 MS.gene30397:CDS 45.0%
TGTCTTCCACCAATTGTTCG+GGG + chr8.1:78536258-78536277 MS.gene30397:intron 45.0%
TGTGCTTCAGATGGTTGAGT+GGG + chr8.1:78537737-78537756 MS.gene30397:CDS 45.0%
TGTTTGTAGATGCGAGCTAG+TGG + chr8.1:78535881-78535900 MS.gene30397:intron 45.0%
TTCAGCGAATGTATGATCGC+GGG + chr8.1:78538493-78538512 MS.gene30397:CDS 45.0%
! ACTTTTGTGGAGGGTTGTGT+TGG + chr8.1:78535655-78535674 MS.gene30397:CDS 45.0%
! ATATACGGGATGTTTGGAGC+TGG + chr8.1:78536031-78536050 MS.gene30397:CDS 45.0%
! ATTCCTAATCGGTTGGCCAA+AGG - chr8.1:78536901-78536920 None:intergenic 45.0%
! GCGCTTGATTGTTGATAAGG+AGG + chr8.1:78537391-78537410 MS.gene30397:CDS 45.0%
! TCCCTCTGAAGGAAGAATTG+AGG + chr8.1:78538355-78538374 MS.gene30397:CDS 45.0%
! TTTTCACCGACGAAGTTTGG+TGG + chr8.1:78535352-78535371 MS.gene30397:CDS 45.0%
!! CTAGATTTGTTGGAGAGGGT+CGG + chr8.1:78538300-78538319 MS.gene30397:CDS 45.0%
!! GCTGTGTTGTTGGCTTTGAT+CGG + chr8.1:78535935-78535954 MS.gene30397:CDS 45.0%
!! GGGTTTGTGAGAAGTGCTTT+GGG + chr8.1:78535508-78535527 MS.gene30397:CDS 45.0%
!! GGTGAATTTGATGGTGTTGG+TGG + chr8.1:78535589-78535608 MS.gene30397:CDS 45.0%
!! GGTGGTGAATTTGATGGTGT+TGG + chr8.1:78535586-78535605 MS.gene30397:CDS 45.0%
!! TAGATTTGTTGGAGAGGGTC+GGG + chr8.1:78538301-78538320 MS.gene30397:CDS 45.0%
!! TGGGTTTGTGAGAAGTGCTT+TGG + chr8.1:78535507-78535526 MS.gene30397:CDS 45.0%
!! TGGTGGTGATTCTGGAATTG+TGG + chr8.1:78535606-78535625 MS.gene30397:CDS 45.0%
!! TTTGTTTTCATCTCCGACGG+TGG + chr8.1:78535237-78535256 MS.gene30397:CDS 45.0%
!!! ACTGGTGGTGGGTTTTTTGA+TGG + chr8.1:78535487-78535506 MS.gene30397:CDS 45.0%
!!! CTGGTGGTGGGTTTTTTGAT+GGG + chr8.1:78535488-78535507 MS.gene30397:CDS 45.0%
ACGTCTGGGAAATCGGTGAT+GGG + chr8.1:78535202-78535221 MS.gene30397:CDS 50.0%
AGCGCAGCCCATAAATGTCA+TGG - chr8.1:78537376-78537395 None:intergenic 50.0%
ATCTCTGCACACTGTGGTGA+TGG + chr8.1:78537596-78537615 MS.gene30397:CDS 50.0%
ATCTTCATCACCACCACCAC+CGG - chr8.1:78535296-78535315 None:intergenic 50.0%
CAAGCAGCAGAGGTTTGCAA+AGG + chr8.1:78536855-78536874 MS.gene30397:CDS 50.0%
CATGCACCTCAGACCATAAC+CGG - chr8.1:78537448-78537467 None:intergenic 50.0%
CCTCCCTGATCGAATTGTTC+CGG - chr8.1:78535461-78535480 None:intergenic 50.0%
CGGAACAATTCGATCAGGGA+GGG + chr8.1:78535459-78535478 MS.gene30397:CDS 50.0%
CGGGCTAACTGTATCAAGCA+TGG + chr8.1:78538512-78538531 MS.gene30397:CDS 50.0%
CTCTTGCATCTGCCATTGCA+AGG - chr8.1:78536771-78536790 None:intergenic 50.0%
CTTTGCAAACCTCTGCTGCT+TGG - chr8.1:78536857-78536876 None:intergenic 50.0%
GATGTACCCCGAACAATTGG+TGG - chr8.1:78536267-78536286 None:intergenic 50.0%
GCATGAGAAGGGAACTTGCA+AGG - chr8.1:78537843-78537862 None:intergenic 50.0%
GGAACAATTCGATCAGGGAG+GGG + chr8.1:78535460-78535479 MS.gene30397:CDS 50.0%
GGCCTCAATTCTTCCTTCAG+AGG - chr8.1:78538360-78538379 None:intergenic 50.0%
GTAGAACACACACTACTCGG+TGG - chr8.1:78535106-78535125 None:intergenic 50.0%
TACGTCTGGGAAATCGGTGA+TGG + chr8.1:78535201-78535220 MS.gene30397:CDS 50.0%
TACTGCTACTGCAAGCAGCA+TGG + chr8.1:78538539-78538558 MS.gene30397:CDS 50.0%
TCTCTGCACACTGTGGTGAT+GGG + chr8.1:78537597-78537616 MS.gene30397:CDS 50.0%
TGTAGTAGTAGCATGGGTGC+CGG + chr8.1:78535427-78535446 MS.gene30397:CDS 50.0%
TTGGATTCGCTGCTCATTGG+AGG + chr8.1:78537682-78537701 MS.gene30397:CDS 50.0%
! ACTGGTGTTAGATTACGCGG+TGG + chr8.1:78535556-78535575 MS.gene30397:CDS 50.0%
! CGACGAAGTTTGGTGGATCT+TGG + chr8.1:78535359-78535378 MS.gene30397:CDS 50.0%
! GGTACCGGAACAATTCGATC+AGG + chr8.1:78535454-78535473 MS.gene30397:CDS 50.0%
! GGTTATGGTCTGAGGTGCAT+GGG + chr8.1:78537447-78537466 MS.gene30397:CDS 50.0%
! TGTTCACCGGTTATGGTCTG+AGG + chr8.1:78537439-78537458 MS.gene30397:CDS 50.0%
!! ACTTCGAGTTTTTCCGGTGG+TGG + chr8.1:78535280-78535299 MS.gene30397:CDS 50.0%
!! GATGGTGTTGGTGGTGATTC+TGG + chr8.1:78535598-78535617 MS.gene30397:CDS 50.0%
!! GGTGGTGGTGGTGAATTTGA+TGG + chr8.1:78535580-78535599 MS.gene30397:CDS 50.0%
AATTGTTCCGGTACCCGCAC+CGG - chr8.1:78535449-78535468 None:intergenic 55.0%
ACTCATTGCTTCGCACTGCC+AGG - chr8.1:78537778-78537797 None:intergenic 55.0%
ATCTTCGTCACCGGCGTCTA+CGG + chr8.1:78535165-78535184 MS.gene30397:CDS 55.0%
CCGGAACAATTCGATCAGGG+AGG + chr8.1:78535458-78535477 MS.gene30397:CDS 55.0%
GCACCTTTGGCCAACCGATT+AGG + chr8.1:78536895-78536914 MS.gene30397:CDS 55.0%
GCTACTGCAAGCAGCATGGT+TGG + chr8.1:78538543-78538562 MS.gene30397:CDS 55.0%
GGCGTCTACGTCTGGGAAAT+CGG + chr8.1:78535195-78535214 MS.gene30397:CDS 55.0%
GGTGTTAGATTACGCGGTGG+TGG + chr8.1:78535559-78535578 MS.gene30397:CDS 55.0%
TTACAAGCCTGATTGCGGGC+AGG + chr8.1:78537881-78537900 MS.gene30397:CDS 55.0%
! AACCTCTGCTGCTTGGCAAC+CGG - chr8.1:78536850-78536869 None:intergenic 55.0%
! ACATGCTGCTTCACCACCGT+CGG - chr8.1:78535253-78535272 None:intergenic 55.0%
! AGATGGTTGAGTGGGCTCGA+TGG + chr8.1:78537745-78537764 MS.gene30397:CDS 55.0%
! CGCTGCTCATTGGAGGTACA+AGG + chr8.1:78537689-78537708 MS.gene30397:CDS 55.0%
! CGGTTATGGTCTGAGGTGCA+TGG + chr8.1:78537446-78537465 MS.gene30397:CDS 55.0%
! GATGGTTGAGTGGGCTCGAT+GGG + chr8.1:78537746-78537765 MS.gene30397:CDS 55.0%
! GTTAGATTACGCGGTGGTGG+TGG + chr8.1:78535562-78535581 MS.gene30397:CDS 55.0%
!! CACACTGTGGTGATGGGTGA+AGG + chr8.1:78537603-78537622 MS.gene30397:CDS 55.0%
!! TCGAGTTTTTCCGGTGGTGG+TGG + chr8.1:78535283-78535302 MS.gene30397:CDS 55.0%
!! TCTGGGAAATCGGTGATGGG+TGG + chr8.1:78535205-78535224 MS.gene30397:CDS 55.0%
!! TGTGGTGATGGGTGAAGGCA+AGG + chr8.1:78537608-78537627 MS.gene30397:CDS 55.0%
AAGCCTGATTGCGGGCAGGA+TGG + chr8.1:78537885-78537904 MS.gene30397:CDS 60.0%
! CGATCAGGGAGGGGAAGTAC+TGG + chr8.1:78535469-78535488 MS.gene30397:CDS 60.0%
! TACCGGTTGCCAAGCAGCAG+AGG + chr8.1:78536845-78536864 MS.gene30397:CDS 60.0%
!! AGATTACGCGGTGGTGGTGG+TGG + chr8.1:78535565-78535584 MS.gene30397:CDS 60.0%
!! GGAGGGGAAGTACTGGTGGT+GGG + chr8.1:78535476-78535495 MS.gene30397:CDS 60.0%
!! TAGTAGCATGGGTGCCGGTG+CGG + chr8.1:78535432-78535451 MS.gene30397:CDS 60.0%
!! TCAGGGAGGGGAAGTACTGG+TGG + chr8.1:78535472-78535491 MS.gene30397:CDS 60.0%
GGTCCATCCTGCCCGCAATC+AGG - chr8.1:78537891-78537910 None:intergenic 65.0%
!! AGTAGCATGGGTGCCGGTGC+GGG + chr8.1:78535433-78535452 MS.gene30397:CDS 65.0%
!! GGGAGGGGAAGTACTGGTGG+TGG + chr8.1:78535475-78535494 MS.gene30397:CDS 65.0%
!! GGGCTCGATGGGTTGTCACC+TGG + chr8.1:78537757-78537776 MS.gene30397:CDS 65.0%
!! TTACGCGGTGGTGGTGGTGG+TGG + chr8.1:78535568-78535587 MS.gene30397:CDS 65.0%
CGACGGCGGCGTCTACGTCT+GGG + chr8.1:78535188-78535207 MS.gene30397:CDS 70.0%
GGGTCGGGCGAGCAAGCTGT+AGG + chr8.1:78538316-78538335 MS.gene30397:CDS 70.0%
GTCACCGGCGTCTACGGCGA+CGG + chr8.1:78535171-78535190 MS.gene30397:CDS 70.0%
!! ATGGGTGCCGGTGCGGGTAC+CGG + chr8.1:78535439-78535458 MS.gene30397:CDS 70.0%
ACCGGCGTCTACGGCGACGG+CGG + chr8.1:78535174-78535193 MS.gene30397:CDS 75.0%
GCGACGGCGGCGTCTACGTC+TGG + chr8.1:78535187-78535206 MS.gene30397:CDS 75.0%
! GCCGCCGTCGCCGTAGACGC+CGG - chr8.1:78535178-78535197 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 78535070 78538575 78535070 ID=MS.gene30397
chr8.1 mRNA 78535070 78538575 78535070 ID=MS.gene30397.t1;Parent=MS.gene30397
chr8.1 exon 78535070 78535798 78535070 ID=MS.gene30397.t1.exon1;Parent=MS.gene30397.t1
chr8.1 CDS 78535070 78535798 78535070 ID=cds.MS.gene30397.t1;Parent=MS.gene30397.t1
chr8.1 exon 78535890 78536075 78535890 ID=MS.gene30397.t1.exon2;Parent=MS.gene30397.t1
chr8.1 CDS 78535890 78536075 78535890 ID=cds.MS.gene30397.t1;Parent=MS.gene30397.t1
chr8.1 exon 78536679 78537139 78536679 ID=MS.gene30397.t1.exon3;Parent=MS.gene30397.t1
chr8.1 CDS 78536679 78537139 78536679 ID=cds.MS.gene30397.t1;Parent=MS.gene30397.t1
chr8.1 exon 78537349 78537507 78537349 ID=MS.gene30397.t1.exon4;Parent=MS.gene30397.t1
chr8.1 CDS 78537349 78537507 78537349 ID=cds.MS.gene30397.t1;Parent=MS.gene30397.t1
chr8.1 exon 78537590 78537941 78537590 ID=MS.gene30397.t1.exon5;Parent=MS.gene30397.t1
chr8.1 CDS 78537590 78537941 78537590 ID=cds.MS.gene30397.t1;Parent=MS.gene30397.t1
chr8.1 exon 78538264 78538575 78538264 ID=MS.gene30397.t1.exon6;Parent=MS.gene30397.t1
chr8.1 CDS 78538264 78538575 78538264 ID=cds.MS.gene30397.t1;Parent=MS.gene30397.t1
Gene Sequence

>MS.gene30397

ATGGCGGTTTCAACTATAGCGTTATACGCGAGTCCACCGAGTAGTGTGTGTTCTACACCGCATCAGATTAACTATGATTTCGAATTAGGATCTAGATCTTCGTCACCGGCGTCTACGGCGACGGCGGCGTCTACGTCTGGGAAATCGGTGATGGGTGGTTTATCGTGTTTGTTTTCATCTCCGACGGTGGTGAAGCAGCATGTTCCTTTTACTTCGAGTTTTTCCGGTGGTGGTGGTGATGAAGATGAATTGAAGGAGCTGAGTAGTTCGTTTTCGTATTCATTTTCACCGACGAAGTTTGGTGGATCTTGGAAGAGAGATCATAGTCCAGTTTCGGTTTTTCAGTGTCCTGTTTCGTGTAGTAGTAGCATGGGTGCCGGTGCGGGTACCGGAACAATTCGATCAGGGAGGGGAAGTACTGGTGGTGGGTTTTTTGATGGGTTTGTGAGAAGTGCTTTGGGTTCTTCTTGTTTGGATTATGATTCTACTGGTGTTAGATTACGCGGTGGTGGTGGTGGTGGTGAATTTGATGGTGTTGGTGGTGATTCTGGAATTGTGGATGAGTTGACTTTTAATTTGGATGATACTTTTGTGGAGGGTTGTGTTGGAATTGAGATTGAGCCTTATGCTAAGAAGTTGTTGATGAATGCTCAGTTAAGACATAAGATCTTTTGTGAAGAGTTTGTTATTAAGGCCTTTTGTGAAGCTGAGAAAGCTCATAGAGGACAGGTGAATTGAGCTTCATGTTTATGTGTGTTTGTGATTTTTGGTTTTGATTATTTGTGTCAATGATTTTGATGAATTGTTTGTTTGTTTGTAGATGCGAGCTAGTGGCGATCCGTATTTGCAGCATTGTTTGGAAACTGCTGTGTTGTTGGCTTTGATCGGTGCGAATTCAACAGTAGTTGCTGCTGGGCTTTTGCATGATACAGTTGATGATGCATTTCTTACTTATGATTATATATACGGGATGTTTGGAGCTGGAGTTGCTGATTTAGTTGAAGGGGTGAGGAATTTTTTTCGGTGTTAATCAATAATTGGGTGTGATTTAAGATTAAGATGATTGATGGTATTTGATCCTTTTGATTTGCATTGCATGTTTTTTTTTTTTTGTTGACATTTGAATCAGTCTTTGCAATTGAGTTTGTTACTGAATTTTATGCTTTAGATCTAGTGTTAATTACTCGATGTCTTCCACCAATTGTTCGGGGTACATCTCTGGAATTGTTGTTGTCGTGTCTCTACATTGACTATTGAGCTGTTTTCCTCTTGATGTTTGTAGTTATTATTGTATTGAAGTAATGACAATTCAAATCCATTAGGTTTATGCAATAAGCTTTGTTCACCTAGCTTTTTATGATAGATTTGTTGCGTTAATATGTTATGTGTTTGTCAAGTGGCAACATTTTATTTTTATTCAATTTTTGTATTGCTAGTGATTTGGCTTTTTTGTATGGATGTATAATTATTAAACCGATTAATTTGTATTGTGGTTGGCATTTTTGTAGGAACGTATAATGTATATTACAAATTAATGAATTCATTTATTTTTTTTGAATTTTTATAGTTTGTTGCTTCAAGAATCTAACTGATTGGTATGCTATTTCAGGTTTCTAAACTGAGTCACTTAAGCAAGCTGGCTCGAGACAATAATACAGCTAGCAAATCTGTTGAAGCTGACCGCCTGCATACAATGTTCCTTGCAATGGCAGATGCAAGAGCTGTCCTCATTAAATTGGCTGATCGATTACATAATATGATGACACTAGATGCATTACCGGTTGCCAAGCAGCAGAGGTTTGCAAAGGAAACTTTGGAGATTTTTGCACCTTTGGCCAACCGATTAGGAATAGCTAATTGGAAGGAACAATTAGAAAATTTATGTTTTAAGCATCTCAACCCTGTACAGCACAAAGAGCTTTCGTCAAAGCTTGTGGAATCGTATGATGACGCAATGATTGCTTCTGCAATAGAAAGATTAGAGCAAGCACTCAAAGATGAAGGCATTTCTTATCATGTCATTTCTGGACGGCACAAGAGCTTGTATAGCGTTTATTGCAAAATATTAAAGTACGTTTTACCTTTCCCTCTTTCATTTGGATGGTCACTTATATAATTTGCGTCGCTATATTTATGTGAATGAAACTATTAATGAAACAAACTGCTTTGAATTTAAAACTACTGATGTAGAAGTATAGCATCATCTTCGCCTGACATTATGCACCATATTATTTGCACACTTCAAATTCTCAATTATTCATTTGTCTACATATTTGCAGGAAAAAACTAAGCATAGATGATATCCATGACATTTATGGGCTGCGCTTGATTGTTGATAAGGAGGAAGATTGTTACAAAGCCTTAGAAGTTGTTCACCGGTTATGGTCTGAGGTGCATGGGAAACTGAAAGATTACATACATTGCCCCAAGTTCAATGGGTATGTTGTAGCTCAATAATGGTAGTGTACACTTGAAAGTGACCGTCTCTATATCATCTGATTTATATTTTGTAATTTGCAGTTATCAATCTCTGCACACTGTGGTGATGGGTGAAGGCAAGGTTCCCCTTGAAGTACAAATTCGAACAAAAGATATGCATTTGCAAGCAGAATTTGGATTCGCTGCTCATTGGAGGTACAAGGAAGATCATTGTCAACTTTCTTCATATGTGCTTCAGATGGTTGAGTGGGCTCGATGGGTTGTCACCTGGCAGTGCGAAGCAATGAGTAAAGATTCCACTTCTGTTGGATTTGTCGATTCAATCAAGTCACCTTGCAAGTTCCCTTCTCATGCTGATAACTGTCCATATTCTTACAAGCCTGATTGCGGGCAGGATGGACCTGTGTTTGTTATCATGATTGAGAATGACAAGGTATGTGCTAGAATTATGTTCAATATTTTGGGTTTAGTTGGTCTGCAAAAAAAGTTACCTGCTTTCATTTCATTATTTATTTTCAATTTTAAAACTGTCCTTTGTTTTAACACTTGTTTTCAAAGATATGTATGTTTTACGTTTGTACAGATATTTGAAAACAGGAAACTGTTAAATTAGGGGTAGTTTTGCAGTTAAAAGTAAAAGCAATTTTTTTTTTTATCTCAAACCAAACAGGCCTTTGGTTTCATGAAGTGTATAATCTTAAGCTGTGTTTGAACGTCTGTATTAACTATCATTCTGTCTGATTCTGGATGTGCAGATGTCTGTCCAAGAATTTTGTGCAAACTCGACAGTACTAGATTTGTTGGAGAGGGTCGGGCGAGCAAGCTGTAGGTTGACAACATATAGGTTCCCTCTGAAGGAAGAATTGAGGCCAAGACTGAATCACAAGCCTGTAAGTGATCCAAATTGCAAGTTGAAGATGGGAGATGTGATCGAGCTTACACCAGCCATACCTGACAAGTATCTGACCGAATATAGGGAAGAAATTCAGCGAATGTATGATCGCGGGCTAACTGTATCAAGCATGGGAACTACTGCTACTGCAAGCAGCATGGTTGGCACTAGTTGA

Protein sequence

>MS.gene30397.t1

MAVSTIALYASPPSSVCSTPHQINYDFELGSRSSSPASTATAASTSGKSVMGGLSCLFSSPTVVKQHVPFTSSFSGGGGDEDELKELSSSFSYSFSPTKFGGSWKRDHSPVSVFQCPVSCSSSMGAGAGTGTIRSGRGSTGGGFFDGFVRSALGSSCLDYDSTGVRLRGGGGGGEFDGVGGDSGIVDELTFNLDDTFVEGCVGIEIEPYAKKLLMNAQLRHKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTVDDAFLTYDYIYGMFGAGVADLVEGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGIANWKEQLENLCFKHLNPVQHKELSSKLVESYDDAMIASAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKKKLSIDDIHDIYGLRLIVDKEEDCYKALEVVHRLWSEVHGKLKDYIHCPKFNGYQSLHTVVMGEGKVPLEVQIRTKDMHLQAEFGFAAHWRYKEDHCQLSSYVLQMVEWARWVVTWQCEAMSKDSTSVGFVDSIKSPCKFPSHADNCPYSYKPDCGQDGPVFVIMIENDKMSVQEFCANSTVLDLLERVGRASCRLTTYRFPLKEELRPRLNHKPVSDPNCKLKMGDVIELTPAIPDKYLTEYREEIQRMYDRGLTVSSMGTTATASSMVGTS