Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82325.t1 | CAA05493.1 | 99.7 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 2.70E-192 | 681 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82325.t1 | P48489 | 82.1 | 302 | 53 | 1 | 1 | 301 | 15 | 316 | 2.7e-153 | 542.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82325.t1 | O65846 | 99.7 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 1.9e-192 | 681.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene82325 | 0.830348 | 3.09E-55 | -1.69E-46 |
| MS.gene049378 | MS.gene82325 | 0.811608 | 6.43E-51 | -1.69E-46 |
| MS.gene049419 | MS.gene82325 | -0.845352 | 4.28E-59 | -1.69E-46 |
| MS.gene049452 | MS.gene82325 | 0.817367 | 3.42E-52 | -1.69E-46 |
| MS.gene049499 | MS.gene82325 | 0.81885 | 1.58E-52 | -1.69E-46 |
| MS.gene049669 | MS.gene82325 | 0.813903 | 2.02E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene82325 | 0.813253 | 2.81E-51 | -1.69E-46 |
| MS.gene050105 | MS.gene82325 | 0.859912 | 2.98E-63 | -1.69E-46 |
| MS.gene050312 | MS.gene82325 | 0.806511 | 7.94E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene82325 | 0.803667 | 3.13E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene82325 | 0.818285 | 2.12E-52 | -1.69E-46 |
| MS.gene050826 | MS.gene82325 | 0.847511 | 1.10E-59 | -1.69E-46 |
| MS.gene050953 | MS.gene82325 | 0.823872 | 1.10E-53 | -1.69E-46 |
| MS.gene051122 | MS.gene82325 | 0.852451 | 4.58E-61 | -1.69E-46 |
| MS.gene051332 | MS.gene82325 | 0.817105 | 3.92E-52 | -1.69E-46 |
| MS.gene051368 | MS.gene82325 | 0.854831 | 9.47E-62 | -1.69E-46 |
| MS.gene051541 | MS.gene82325 | 0.801011 | 1.10E-48 | -1.69E-46 |
| MS.gene051800 | MS.gene82325 | 0.811595 | 6.47E-51 | -1.69E-46 |
| MS.gene051924 | MS.gene82325 | -0.860798 | 1.61E-63 | -1.69E-46 |
| MS.gene051926 | MS.gene82325 | -0.861305 | 1.13E-63 | -1.69E-46 |
| MS.gene05216 | MS.gene82325 | 0.848864 | 4.67E-60 | -1.69E-46 |
| MS.gene052333 | MS.gene82325 | 0.856575 | 2.93E-62 | -1.69E-46 |
| MS.gene052389 | MS.gene82325 | 0.809899 | 1.51E-50 | -1.69E-46 |
| MS.gene052493 | MS.gene82325 | 0.821389 | 4.14E-53 | -1.69E-46 |
| MS.gene052534 | MS.gene82325 | 0.834779 | 2.46E-56 | -1.69E-46 |
| MS.gene052586 | MS.gene82325 | 0.842568 | 2.39E-58 | -1.69E-46 |
| MS.gene052674 | MS.gene82325 | 0.895146 | 1.26E-75 | -1.69E-46 |
| MS.gene052675 | MS.gene82325 | 0.894408 | 2.54E-75 | -1.69E-46 |
| MS.gene052677 | MS.gene82325 | 0.896797 | 2.61E-76 | -1.69E-46 |
| MS.gene052954 | MS.gene82325 | 0.827046 | 1.94E-54 | -1.69E-46 |
| MS.gene053166 | MS.gene82325 | 0.850043 | 2.19E-60 | -1.69E-46 |
| MS.gene05350 | MS.gene82325 | 0.813747 | 2.19E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene82325 | 0.837559 | 4.84E-57 | -1.69E-46 |
| MS.gene054291 | MS.gene82325 | -0.825974 | 3.50E-54 | -1.69E-46 |
| MS.gene054405 | MS.gene82325 | 0.816771 | 4.66E-52 | -1.69E-46 |
| MS.gene054467 | MS.gene82325 | 0.800029 | 1.75E-48 | -1.69E-46 |
| MS.gene054468 | MS.gene82325 | 0.847865 | 8.82E-60 | -1.69E-46 |
| MS.gene054479 | MS.gene82325 | 0.863335 | 2.68E-64 | -1.69E-46 |
| MS.gene054559 | MS.gene82325 | 0.825077 | 5.71E-54 | -1.69E-46 |
| MS.gene054950 | MS.gene82325 | -0.819897 | 9.12E-53 | -1.69E-46 |
| MS.gene055225 | MS.gene82325 | 0.808157 | 3.56E-50 | -1.69E-46 |
| MS.gene055227 | MS.gene82325 | 0.810814 | 9.56E-51 | -1.69E-46 |
| MS.gene055228 | MS.gene82325 | 0.808137 | 3.59E-50 | -1.69E-46 |
| MS.gene055230 | MS.gene82325 | 0.811272 | 7.61E-51 | -1.69E-46 |
| MS.gene055453 | MS.gene82325 | -0.827385 | 1.61E-54 | -1.69E-46 |
| MS.gene055455 | MS.gene82325 | -0.815049 | 1.13E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene82325 | 0.878683 | 2.30E-69 | -1.69E-46 |
| MS.gene055724 | MS.gene82325 | 0.831992 | 1.22E-55 | -1.69E-46 |
| MS.gene055926 | MS.gene82325 | 0.835251 | 1.87E-56 | -1.69E-46 |
| MS.gene05604 | MS.gene82325 | 0.801327 | 9.49E-49 | -1.69E-46 |
| MS.gene056064 | MS.gene82325 | 0.82749 | 1.52E-54 | -1.69E-46 |
| MS.gene056480 | MS.gene82325 | 0.861136 | 1.27E-63 | -1.69E-46 |
| MS.gene056506 | MS.gene82325 | 0.809618 | 1.73E-50 | -1.69E-46 |
| MS.gene056779 | MS.gene82325 | 0.858962 | 5.75E-63 | -1.69E-46 |
| MS.gene056873 | MS.gene82325 | 0.810099 | 1.36E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene82325 | 0.826845 | 2.17E-54 | -1.69E-46 |
| MS.gene057155 | MS.gene82325 | 0.812683 | 3.75E-51 | -1.69E-46 |
| MS.gene057156 | MS.gene82325 | -0.880253 | 6.39E-70 | -1.69E-46 |
| MS.gene057208 | MS.gene82325 | 0.864898 | 8.73E-65 | -1.69E-46 |
| MS.gene057371 | MS.gene82325 | 0.804942 | 1.70E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene82325 | 0.807917 | 4.00E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene82325 | 0.839002 | 2.06E-57 | -1.69E-46 |
| MS.gene058223 | MS.gene82325 | -0.868584 | 5.86E-66 | -1.69E-46 |
| MS.gene058429 | MS.gene82325 | 0.836396 | 9.59E-57 | -1.69E-46 |
| MS.gene058595 | MS.gene82325 | 0.805062 | 1.60E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene82325 | 0.824712 | 6.96E-54 | -1.69E-46 |
| MS.gene059161 | MS.gene82325 | 0.821027 | 5.02E-53 | -1.69E-46 |
| MS.gene059283 | MS.gene82325 | 0.803106 | 4.08E-49 | -1.69E-46 |
| MS.gene059438 | MS.gene82325 | 0.842989 | 1.85E-58 | -1.69E-46 |
| MS.gene059439 | MS.gene82325 | 0.830537 | 2.78E-55 | -1.69E-46 |
| MS.gene059440 | MS.gene82325 | 0.852871 | 3.47E-61 | -1.69E-46 |
| MS.gene059952 | MS.gene82325 | 0.859997 | 2.81E-63 | -1.69E-46 |
| MS.gene060011 | MS.gene82325 | 0.840162 | 1.03E-57 | -1.69E-46 |
| MS.gene060322 | MS.gene82325 | 0.848195 | 7.15E-60 | -1.69E-46 |
| MS.gene060373 | MS.gene82325 | 0.827627 | 1.41E-54 | -1.69E-46 |
| MS.gene06052 | MS.gene82325 | 0.857544 | 1.52E-62 | -1.69E-46 |
| MS.gene060777 | MS.gene82325 | 0.814197 | 1.74E-51 | -1.69E-46 |
| MS.gene060850 | MS.gene82325 | 0.868709 | 5.34E-66 | -1.69E-46 |
| MS.gene060851 | MS.gene82325 | 0.881018 | 3.40E-70 | -1.69E-46 |
| MS.gene060852 | MS.gene82325 | 0.878526 | 2.62E-69 | -1.69E-46 |
| MS.gene060879 | MS.gene82325 | 0.840699 | 7.43E-58 | -1.69E-46 |
| MS.gene060932 | MS.gene82325 | 0.840477 | 8.49E-58 | -1.69E-46 |
| MS.gene06121 | MS.gene82325 | 0.809271 | 2.05E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82325.t1 | MTR_1g074880 | 98.160 | 326 | 6 | 0 | 1 | 326 | 1 | 326 | 0.0 | 667 |
| MS.gene82325.t1 | MTR_1g074880 | 98.113 | 318 | 6 | 0 | 1 | 318 | 1 | 318 | 0.0 | 651 |
| MS.gene82325.t1 | MTR_1g043240 | 83.486 | 327 | 45 | 2 | 1 | 326 | 1 | 319 | 0.0 | 574 |
| MS.gene82325.t1 | MTR_1g079950 | 80.675 | 326 | 63 | 0 | 1 | 326 | 30 | 355 | 0.0 | 572 |
| MS.gene82325.t1 | MTR_1g079950 | 80.675 | 326 | 63 | 0 | 1 | 326 | 1 | 326 | 0.0 | 571 |
| MS.gene82325.t1 | MTR_7g116380 | 81.902 | 326 | 59 | 0 | 1 | 326 | 1 | 326 | 0.0 | 570 |
| MS.gene82325.t1 | MTR_1g079950 | 81.346 | 327 | 58 | 2 | 1 | 324 | 1 | 327 | 0.0 | 568 |
| MS.gene82325.t1 | MTR_1g079950 | 82.445 | 319 | 55 | 1 | 1 | 318 | 1 | 319 | 0.0 | 566 |
| MS.gene82325.t1 | MTR_7g116380 | 83.386 | 319 | 52 | 1 | 1 | 318 | 1 | 319 | 0.0 | 564 |
| MS.gene82325.t1 | MTR_1g074880 | 98.134 | 268 | 5 | 0 | 59 | 326 | 4 | 271 | 0.0 | 553 |
| MS.gene82325.t1 | MTR_1g074880 | 98.077 | 260 | 5 | 0 | 59 | 318 | 4 | 263 | 0.0 | 536 |
| MS.gene82325.t1 | MTR_5g081230 | 81.457 | 302 | 55 | 1 | 1 | 301 | 17 | 318 | 0.0 | 525 |
| MS.gene82325.t1 | MTR_8g098980 | 74.132 | 317 | 81 | 1 | 1 | 316 | 1 | 317 | 0.0 | 512 |
| MS.gene82325.t1 | MTR_8g005010 | 77.586 | 290 | 65 | 0 | 6 | 295 | 4 | 293 | 2.93e-177 | 492 |
| MS.gene82325.t1 | MTR_7g112870 | 74.026 | 308 | 74 | 2 | 1 | 308 | 5 | 306 | 6.61e-173 | 482 |
| MS.gene82325.t1 | MTR_1g079950 | 82.836 | 268 | 43 | 2 | 60 | 324 | 34 | 301 | 2.12e-171 | 478 |
| MS.gene82325.t1 | MTR_5g093990 | 46.758 | 293 | 150 | 3 | 26 | 317 | 17 | 304 | 3.23e-94 | 282 |
| MS.gene82325.t1 | MTR_7g107310 | 48.175 | 274 | 140 | 2 | 26 | 298 | 27 | 299 | 3.60e-94 | 282 |
| MS.gene82325.t1 | MTR_8g085610 | 45.455 | 297 | 153 | 3 | 3 | 298 | 6 | 294 | 2.73e-92 | 277 |
| MS.gene82325.t1 | MTR_8g062430 | 47.810 | 274 | 141 | 2 | 26 | 298 | 20 | 292 | 2.86e-92 | 277 |
| MS.gene82325.t1 | MTR_5g037200 | 47.810 | 274 | 141 | 2 | 26 | 298 | 20 | 292 | 6.00e-91 | 274 |
| MS.gene82325.t1 | MTR_8g085610 | 47.037 | 270 | 141 | 2 | 30 | 298 | 2 | 270 | 4.92e-90 | 271 |
| MS.gene82325.t1 | MTR_1g039380 | 45.247 | 263 | 141 | 3 | 25 | 285 | 15 | 276 | 1.27e-89 | 270 |
| MS.gene82325.t1 | MTR_1g039380 | 45.783 | 249 | 132 | 3 | 39 | 285 | 5 | 252 | 3.05e-87 | 263 |
| MS.gene82325.t1 | MTR_4g050540 | 47.869 | 305 | 140 | 8 | 9 | 295 | 649 | 952 | 1.59e-83 | 272 |
| MS.gene82325.t1 | MTR_2g087530 | 47.869 | 305 | 140 | 8 | 9 | 295 | 644 | 947 | 1.88e-83 | 271 |
| MS.gene82325.t1 | MTR_1g089370 | 47.097 | 310 | 147 | 6 | 3 | 295 | 522 | 831 | 5.86e-83 | 268 |
| MS.gene82325.t1 | MTR_2g087530 | 45.593 | 329 | 158 | 9 | 9 | 319 | 531 | 856 | 1.80e-82 | 267 |
| MS.gene82325.t1 | MTR_3g452710 | 45.059 | 253 | 132 | 4 | 33 | 279 | 195 | 446 | 1.17e-72 | 233 |
| MS.gene82325.t1 | MTR_3g452710 | 45.059 | 253 | 132 | 4 | 33 | 279 | 262 | 513 | 3.67e-72 | 233 |
| MS.gene82325.t1 | MTR_2g100130 | 40.830 | 289 | 159 | 6 | 22 | 299 | 102 | 389 | 1.10e-69 | 223 |
| MS.gene82325.t1 | MTR_2g100130 | 43.019 | 265 | 143 | 5 | 22 | 279 | 201 | 464 | 2.00e-68 | 222 |
| MS.gene82325.t1 | MTR_2g100130 | 43.019 | 265 | 143 | 5 | 22 | 279 | 172 | 435 | 2.07e-68 | 221 |
| MS.gene82325.t1 | MTR_2g100130 | 43.019 | 265 | 143 | 5 | 22 | 279 | 211 | 474 | 2.21e-68 | 222 |
| MS.gene82325.t1 | MTR_2g100130 | 43.019 | 265 | 143 | 5 | 22 | 279 | 211 | 474 | 3.31e-68 | 222 |
| MS.gene82325.t1 | MTR_2g100130 | 43.019 | 265 | 142 | 6 | 22 | 279 | 172 | 434 | 4.72e-67 | 218 |
| MS.gene82325.t1 | MTR_2g100130 | 43.019 | 265 | 142 | 6 | 22 | 279 | 211 | 473 | 5.46e-67 | 219 |
| MS.gene82325.t1 | MTR_2g100130 | 43.529 | 255 | 136 | 5 | 22 | 269 | 211 | 464 | 1.07e-66 | 217 |
| MS.gene82325.t1 | MTR_2g100160 | 40.288 | 278 | 154 | 6 | 33 | 299 | 132 | 408 | 1.94e-61 | 201 |
| MS.gene82325.t1 | MTR_5g037200 | 50.299 | 167 | 82 | 1 | 26 | 191 | 20 | 186 | 5.21e-56 | 181 |
| MS.gene82325.t1 | MTR_8g072600 | 31.746 | 315 | 148 | 10 | 33 | 281 | 100 | 413 | 1.78e-38 | 142 |
| MS.gene82325.t1 | MTR_8g072600 | 32.661 | 248 | 121 | 7 | 33 | 235 | 100 | 346 | 8.58e-32 | 122 |
| MS.gene82325.t1 | MTR_2g099710 | 26.923 | 286 | 137 | 11 | 31 | 268 | 211 | 472 | 5.49e-20 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82325.t1 | AT2G39840 | 79.412 | 306 | 62 | 1 | 1 | 305 | 14 | 319 | 0.0 | 526 |
| MS.gene82325.t1 | AT5G43380 | 77.707 | 314 | 70 | 0 | 1 | 314 | 1 | 314 | 0.0 | 523 |
| MS.gene82325.t1 | AT5G43380 | 77.707 | 314 | 70 | 0 | 1 | 314 | 1 | 314 | 0.0 | 521 |
| MS.gene82325.t1 | AT5G43380 | 77.707 | 314 | 70 | 0 | 1 | 314 | 1 | 314 | 0.0 | 521 |
| MS.gene82325.t1 | AT2G29400 | 80.921 | 304 | 54 | 3 | 1 | 301 | 15 | 317 | 0.0 | 521 |
| MS.gene82325.t1 | AT1G64040 | 75.710 | 317 | 76 | 1 | 1 | 316 | 1 | 317 | 0.0 | 518 |
| MS.gene82325.t1 | AT5G59160 | 79.208 | 303 | 61 | 2 | 1 | 301 | 9 | 311 | 0.0 | 516 |
| MS.gene82325.t1 | AT5G59160 | 79.208 | 303 | 61 | 2 | 1 | 301 | 9 | 311 | 0.0 | 516 |
| MS.gene82325.t1 | AT5G59160 | 79.208 | 303 | 61 | 2 | 1 | 301 | 9 | 311 | 0.0 | 516 |
| MS.gene82325.t1 | AT3G46820 | 77.228 | 303 | 67 | 1 | 1 | 301 | 9 | 311 | 0.0 | 505 |
| MS.gene82325.t1 | AT4G11240 | 71.609 | 317 | 89 | 1 | 1 | 316 | 1 | 317 | 2.52e-178 | 496 |
| MS.gene82325.t1 | AT5G27840 | 76.190 | 294 | 68 | 1 | 1 | 294 | 9 | 300 | 7.48e-174 | 485 |
| MS.gene82325.t1 | AT5G27840 | 76.190 | 294 | 68 | 1 | 1 | 294 | 9 | 300 | 8.10e-174 | 485 |
| MS.gene82325.t1 | AT5G27840 | 76.190 | 294 | 68 | 1 | 1 | 294 | 9 | 300 | 8.10e-174 | 485 |
| MS.gene82325.t1 | AT5G27840 | 76.190 | 294 | 68 | 1 | 1 | 294 | 9 | 300 | 8.30e-174 | 484 |
| MS.gene82325.t1 | AT3G05580 | 76.190 | 294 | 68 | 1 | 1 | 294 | 9 | 300 | 2.61e-171 | 478 |
| MS.gene82325.t1 | AT3G05580 | 75.203 | 246 | 59 | 1 | 1 | 246 | 9 | 252 | 5.99e-139 | 394 |
| MS.gene82325.t1 | AT5G55260 | 47.099 | 293 | 149 | 3 | 26 | 317 | 17 | 304 | 1.22e-96 | 288 |
| MS.gene82325.t1 | AT2G42500 | 48.540 | 274 | 139 | 2 | 26 | 298 | 27 | 299 | 2.09e-95 | 285 |
| MS.gene82325.t1 | AT3G58500 | 47.810 | 274 | 141 | 2 | 26 | 298 | 27 | 299 | 8.81e-94 | 281 |
| MS.gene82325.t1 | AT1G69960 | 46.284 | 296 | 150 | 3 | 4 | 298 | 6 | 293 | 4.76e-93 | 279 |
| MS.gene82325.t1 | AT4G26720 | 46.269 | 268 | 143 | 1 | 26 | 292 | 17 | 284 | 9.56e-93 | 278 |
| MS.gene82325.t1 | AT1G10430 | 45.270 | 296 | 153 | 3 | 4 | 298 | 5 | 292 | 1.22e-91 | 276 |
| MS.gene82325.t1 | AT1G10430 | 45.270 | 296 | 153 | 3 | 4 | 298 | 5 | 292 | 1.22e-91 | 276 |
| MS.gene82325.t1 | AT1G59830 | 45.946 | 296 | 151 | 3 | 4 | 298 | 5 | 292 | 2.26e-91 | 275 |
| MS.gene82325.t1 | AT3G19980 | 45.247 | 263 | 141 | 3 | 25 | 285 | 15 | 276 | 2.98e-89 | 269 |
| MS.gene82325.t1 | AT1G50370 | 44.867 | 263 | 142 | 3 | 25 | 285 | 15 | 276 | 3.79e-89 | 269 |
| MS.gene82325.t1 | AT5G55260 | 41.317 | 334 | 149 | 4 | 26 | 317 | 17 | 345 | 4.66e-88 | 268 |
| MS.gene82325.t1 | AT4G03080 | 46.774 | 310 | 148 | 7 | 3 | 295 | 524 | 833 | 1.76e-83 | 270 |
| MS.gene82325.t1 | AT2G27210 | 47.213 | 305 | 142 | 8 | 9 | 295 | 650 | 953 | 4.46e-82 | 268 |
| MS.gene82325.t1 | AT2G27210 | 47.213 | 305 | 142 | 8 | 9 | 295 | 655 | 958 | 4.72e-82 | 268 |
| MS.gene82325.t1 | AT1G08420 | 47.213 | 305 | 142 | 8 | 9 | 295 | 661 | 964 | 2.36e-81 | 266 |
| MS.gene82325.t1 | AT1G08420 | 47.213 | 305 | 142 | 8 | 9 | 295 | 666 | 969 | 2.49e-81 | 266 |
| MS.gene82325.t1 | AT1G59830 | 48.606 | 251 | 120 | 3 | 4 | 253 | 5 | 247 | 2.72e-80 | 245 |
| MS.gene82325.t1 | AT1G03445 | 46.831 | 284 | 134 | 7 | 26 | 294 | 476 | 757 | 8.01e-79 | 256 |
| MS.gene82325.t1 | AT1G03445 | 46.831 | 284 | 134 | 7 | 26 | 294 | 476 | 757 | 9.78e-79 | 256 |
| MS.gene82325.t1 | AT2G42500 | 49.321 | 221 | 110 | 2 | 79 | 298 | 33 | 252 | 3.69e-75 | 232 |
| MS.gene82325.t1 | AT2G42810 | 44.664 | 253 | 133 | 4 | 33 | 279 | 197 | 448 | 5.19e-70 | 226 |
| MS.gene82325.t1 | AT2G42810 | 44.664 | 253 | 133 | 4 | 33 | 279 | 197 | 448 | 5.19e-70 | 226 |
| MS.gene82325.t1 | AT2G42810 | 44.664 | 253 | 133 | 4 | 33 | 279 | 197 | 448 | 5.19e-70 | 226 |
| MS.gene82325.t1 | AT2G42810 | 44.664 | 253 | 133 | 4 | 33 | 279 | 250 | 501 | 1.47e-69 | 226 |
| MS.gene82325.t1 | AT2G42810 | 44.664 | 253 | 133 | 4 | 33 | 279 | 251 | 502 | 1.65e-69 | 226 |
| MS.gene82325.t1 | AT2G42500 | 48.299 | 147 | 72 | 3 | 26 | 168 | 27 | 173 | 2.88e-44 | 150 |
| MS.gene82325.t1 | AT2G42500 | 47.403 | 154 | 75 | 4 | 26 | 175 | 27 | 178 | 1.02e-43 | 148 |
| MS.gene82325.t1 | AT2G42500 | 50.360 | 139 | 65 | 3 | 26 | 160 | 27 | 165 | 1.61e-43 | 147 |
| MS.gene82325.t1 | AT5G63870 | 30.473 | 338 | 168 | 11 | 33 | 303 | 52 | 389 | 6.45e-36 | 134 |
| MS.gene82325.t1 | AT5G63870 | 30.473 | 338 | 168 | 11 | 33 | 303 | 52 | 389 | 6.45e-36 | 134 |
| MS.gene82325.t1 | AT1G48120 | 29.706 | 340 | 167 | 9 | 31 | 300 | 628 | 965 | 6.66e-30 | 120 |
| MS.gene82325.t1 | AT5G63870 | 31.837 | 245 | 127 | 6 | 33 | 237 | 52 | 296 | 4.08e-29 | 114 |
| MS.gene82325.t1 | AT5G10900 | 33.023 | 215 | 120 | 8 | 52 | 245 | 222 | 433 | 1.68e-22 | 98.6 |
| MS.gene82325.t1 | AT5G10900 | 33.491 | 212 | 117 | 8 | 55 | 245 | 225 | 433 | 1.88e-22 | 98.6 |
| MS.gene82325.t1 | AT5G10900 | 33.491 | 212 | 117 | 8 | 55 | 245 | 225 | 433 | 1.92e-22 | 98.2 |
Find 56 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTCTCCACAGTAATT+AGG | 0.241896 | 1.3:-53375840 | None:intergenic |
| GTCTATTATGTGACCTCTTA+TGG | 0.268848 | 1.3:+53375528 | MS.gene82325:CDS |
| AAATCCGTAGATACGGTTTA+TGG | 0.280200 | 1.3:-53375318 | None:intergenic |
| AATATACCACAGATCTTAAT+AGG | 0.298021 | 1.3:-53374075 | None:intergenic |
| TGATTTAAATCGTGTAATTC+AGG | 0.302882 | 1.3:-53375464 | None:intergenic |
| ATGATCTTGATTTGATTTGC+AGG | 0.337705 | 1.3:+53375648 | MS.gene82325:CDS |
| CCGTGTGAAGTTCCTGAATC+TGG | 0.374187 | 1.3:+53375506 | MS.gene82325:CDS |
| CGTGGAGTTTCATATACATT+TGG | 0.381055 | 1.3:+53375593 | MS.gene82325:CDS |
| TAGTAGTGATGTTCGTGGTT+GGG | 0.384770 | 1.3:+53375559 | MS.gene82325:CDS |
| AGAAACAATATGTCTTCTTC+TGG | 0.391096 | 1.3:+53375235 | MS.gene82325:CDS |
| TTTGATTTGCAGGGCTCATC+AGG | 0.392866 | 1.3:+53375658 | MS.gene82325:CDS |
| ATTCGTGGTTACCCCTTAGA+AGG | 0.394389 | 1.3:-53375289 | None:intergenic |
| ATGTTACCAGGAGATATTCA+TGG | 0.394694 | 1.3:+53375110 | MS.gene82325:intron |
| TTGTTGATGGTATTATCAAT+AGG | 0.402079 | 1.3:+53373929 | MS.gene82325:CDS |
| TCACATAATAGACCAGATTC+AGG | 0.431932 | 1.3:-53375518 | None:intergenic |
| GAAAGCTGAACCTGCTTCCC+TGG | 0.443268 | 1.3:-53373973 | None:intergenic |
| AGTAGTGATGTTCGTGGTTG+GGG | 0.445269 | 1.3:+53375560 | MS.gene82325:CDS |
| ATGGAACGTGGAGTTGTTGA+TGG | 0.454585 | 1.3:+53373916 | MS.gene82325:CDS |
| AAGAGGAAGACCAGGGAAGC+AGG | 0.459465 | 1.3:+53373963 | MS.gene82325:CDS |
| GGAGATACAATGTGAAGCTA+TGG | 0.485510 | 1.3:+53375357 | MS.gene82325:CDS |
| CAACCACGAACATCACTACT+AGG | 0.486128 | 1.3:-53375557 | None:intergenic |
| TAGTAGTCCAACAAAATTCA+AGG | 0.492608 | 1.3:+53375977 | MS.gene82325:CDS |
| GCCTCTAGTTTCAAGAGATT+AGG | 0.495023 | 1.3:-53374051 | None:intergenic |
| AAGAAACTCTTTAACCCTAT+CGG | 0.496948 | 1.3:-53375618 | None:intergenic |
| AATAGGTTACTTGAAGTAAG+AGG | 0.499906 | 1.3:+53373946 | MS.gene82325:CDS |
| CTAGTAGTGATGTTCGTGGT+TGG | 0.504572 | 1.3:+53375558 | MS.gene82325:CDS |
| TACTAGGATCAGACCATAAG+AGG | 0.507611 | 1.3:-53375541 | None:intergenic |
| TGATCTTGATTTGATTTGCA+GGG | 0.513485 | 1.3:+53375649 | MS.gene82325:CDS |
| GTCAATATTCCGACCTTCTG+AGG | 0.518139 | 1.3:+53375132 | MS.gene82325:CDS |
| CTTGAAGTAAGAGGAAGACC+AGG | 0.522885 | 1.3:+53373955 | MS.gene82325:CDS |
| ATATACATTTGGTGCCGATA+GGG | 0.527545 | 1.3:+53375604 | MS.gene82325:CDS |
| CTAGTTTCAAGAGATTAGGC+TGG | 0.529287 | 1.3:-53374047 | None:intergenic |
| CATCATAAAATCCGTAGATA+CGG | 0.530362 | 1.3:-53375325 | None:intergenic |
| CATATACATTTGGTGCCGAT+AGG | 0.532156 | 1.3:+53375603 | MS.gene82325:CDS |
| TTGTTGCAGGTTGTGGAAGA+CGG | 0.543349 | 1.3:+53375771 | MS.gene82325:intron |
| GTGCTTCCAAAGCTAAACTT+AGG | 0.544982 | 1.3:-53375939 | None:intergenic |
| CTCGAAAAGCCTCAGAAGGT+CGG | 0.552388 | 1.3:-53375141 | None:intergenic |
| GGTTTATGGAAGCACATTCG+TGG | 0.557667 | 1.3:-53375304 | None:intergenic |
| TGTGGAGAATTTGACAATGC+TGG | 0.567360 | 1.3:+53375849 | MS.gene82325:CDS |
| TTTCAATTGTTTGCCTGTGG+CGG | 0.574441 | 1.3:+53375397 | MS.gene82325:CDS |
| GCTTCCATAAACCGTATCTA+CGG | 0.579276 | 1.3:+53375314 | MS.gene82325:CDS |
| AAGCAGGTTCAGCTTTCTGA+AGG | 0.586300 | 1.3:+53373979 | MS.gene82325:CDS |
| GATCCTAGTAGTGATGTTCG+TGG | 0.596697 | 1.3:+53375554 | MS.gene82325:CDS |
| TCATCAATGAGAGCCGCCAC+AGG | 0.602243 | 1.3:-53375410 | None:intergenic |
| GGTTGGGGAGAAAGCGAGCG+TGG | 0.603320 | 1.3:+53375575 | MS.gene82325:CDS |
| TTGTTTCAATTGTTTGCCTG+TGG | 0.606705 | 1.3:+53375394 | MS.gene82325:CDS |
| GAAAAGATTATCTGTATGCA+TGG | 0.619510 | 1.3:+53375431 | MS.gene82325:CDS |
| CAAATTAGAAATATGGAACG+TGG | 0.634209 | 1.3:+53373904 | None:intergenic |
| AATAAATAATTCGAGCGAGG+AGG | 0.639135 | 1.3:-53375176 | None:intergenic |
| CCAGATTCAGGAACTTCACA+CGG | 0.648649 | 1.3:-53375506 | None:intergenic |
| GAGGCACCTATTAAGATCTG+TGG | 0.649585 | 1.3:+53374069 | MS.gene82325:CDS |
| CGTACTCGAAAAGCCTCAGA+AGG | 0.657790 | 1.3:-53375145 | None:intergenic |
| TTAGGAGACTATGTTGATCG+CGG | 0.661259 | 1.3:+53375200 | MS.gene82325:CDS |
| GCCTAATCTCTTGAAACTAG+AGG | 0.671584 | 1.3:+53374050 | MS.gene82325:CDS |
| TTGAAGTAAGAGGAAGACCA+GGG | 0.672507 | 1.3:+53373956 | MS.gene82325:CDS |
| AAGATTATCTGTATGCATGG+TGG | 0.720136 | 1.3:+53375434 | MS.gene82325:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTGATTTAATTAGTAT+AGG | + | chr1.3:53374130-53374149 | MS.gene82325:intron | 10.0% |
| !! | AAAAAAATTATGTATTGTCT+AGG | + | chr1.3:53374434-53374453 | MS.gene82325:intron | 15.0% |
| !! | AAAAAATTATGTATTGTCTA+GGG | + | chr1.3:53374435-53374454 | MS.gene82325:intron | 15.0% |
| !! | TCAATTATATTCATCATAAT+TGG | + | chr1.3:53374194-53374213 | MS.gene82325:intron | 15.0% |
| !! | TCATACAAAGTAATTATATA+TGG | + | chr1.3:53374398-53374417 | MS.gene82325:intron | 15.0% |
| !! | TTATGTATAAACTTAGAATT+TGG | - | chr1.3:53375727-53375746 | None:intergenic | 15.0% |
| !! | TTCTAAGTTTATACATAATA+AGG | + | chr1.3:53375729-53375748 | MS.gene82325:intron | 15.0% |
| !!! | CTTTAAAAACTTTTATATTG+CGG | + | chr1.3:53374672-53374691 | MS.gene82325:intron | 15.0% |
| !! | TAATAGTTAAAGAGAGAAAA+AGG | - | chr1.3:53374223-53374242 | None:intergenic | 20.0% |
| !! | TGAAACAAGAATGAATAATT+AGG | - | chr1.3:53374927-53374946 | None:intergenic | 20.0% |
| !!! | GATTTTATGATGAATGTAAA+AGG | + | chr1.3:53375336-53375355 | MS.gene82325:CDS | 20.0% |
| !!! | TAAAAACTTTTTCCTTCTAA+GGG | + | chr1.3:53375277-53375296 | MS.gene82325:CDS | 20.0% |
| !!! | TTACAAATTTTAAAGTGACA+CGG | + | chr1.3:53374240-53374259 | MS.gene82325:intron | 20.0% |
| ! | AAAAATAAATAATTCGAGCG+AGG | - | chr1.3:53375182-53375201 | None:intergenic | 25.0% |
| ! | AATATACCACAGATCTTAAT+AGG | - | chr1.3:53374078-53374097 | None:intergenic | 25.0% |
| ! | AGGTTAAATATGTTTGATCA+CGG | - | chr1.3:53375040-53375059 | None:intergenic | 25.0% |
| ! | AGTTTGAATATGTAATCTCA+AGG | - | chr1.3:53376116-53376135 | None:intergenic | 25.0% |
| ! | ATAAGTGTGAAACTAAACAT+AGG | + | chr1.3:53375003-53375022 | MS.gene82325:intron | 25.0% |
| ! | CAATTCTAATTAAACTGATG+TGG | + | chr1.3:53374882-53374901 | MS.gene82325:intron | 25.0% |
| ! | CATCAGTTTAATTAGAATTG+TGG | - | chr1.3:53374882-53374901 | None:intergenic | 25.0% |
| ! | TGATTTAAATCGTGTAATTC+AGG | - | chr1.3:53375467-53375486 | None:intergenic | 25.0% |
| ! | TTTCATTTCTTTATGTTACC+AGG | + | chr1.3:53375098-53375117 | MS.gene82325:intron | 25.0% |
| !! | CAAAATACCTTGAATTTTGT+TGG | - | chr1.3:53375987-53376006 | None:intergenic | 25.0% |
| !! | CTTAGAAGGAAAAAGTTTTT+AGG | - | chr1.3:53375278-53375297 | None:intergenic | 25.0% |
| !! | TGTAATTTTCTTTTTGTTGC+AGG | + | chr1.3:53375758-53375777 | MS.gene82325:intron | 25.0% |
| !!! | AAAAACTTTTTCCTTCTAAG+GGG | + | chr1.3:53375278-53375297 | MS.gene82325:CDS | 25.0% |
| !!! | AGGATTTAATTTGTATACGT+CGG | + | chr1.3:53374150-53374169 | MS.gene82325:intron | 25.0% |
| !!! | CGCTCGAATTATTTATTTTT+AGG | + | chr1.3:53375182-53375201 | MS.gene82325:CDS | 25.0% |
| !!! | CTAAAAACTTTTTCCTTCTA+AGG | + | chr1.3:53375276-53375295 | MS.gene82325:CDS | 25.0% |
| !!! | TCATCGTAACAAGTTTTATA+CGG | - | chr1.3:53374288-53374307 | None:intergenic | 25.0% |
| !!! | TCTAAACTTGTTTTAATGTC+AGG | - | chr1.3:53374361-53374380 | None:intergenic | 25.0% |
| !!! | TTGTTGATGGTATTATCAAT+AGG | + | chr1.3:53373929-53373948 | MS.gene82325:CDS | 25.0% |
| AAATTATGTATTGTCTAGGG+CGG | + | chr1.3:53374438-53374457 | MS.gene82325:intron | 30.0% | |
| AAGAAACTCTTTAACCCTAT+CGG | - | chr1.3:53375621-53375640 | None:intergenic | 30.0% | |
| AATAGGTTACTTGAAGTAAG+AGG | + | chr1.3:53373946-53373965 | MS.gene82325:CDS | 30.0% | |
| AGAAACAATATGTCTTCTTC+TGG | + | chr1.3:53375235-53375254 | MS.gene82325:CDS | 30.0% | |
| ATGAAACAAGACATTAGCAT+AGG | - | chr1.3:53375084-53375103 | None:intergenic | 30.0% | |
| CATCATAAAATCCGTAGATA+CGG | - | chr1.3:53375328-53375347 | None:intergenic | 30.0% | |
| GAAAAGATTATCTGTATGCA+TGG | + | chr1.3:53375431-53375450 | MS.gene82325:CDS | 30.0% | |
| GAATATGTAATCTCAAGGAA+CGG | - | chr1.3:53376111-53376130 | None:intergenic | 30.0% | |
| GTATATATCAGTTGTTCATG+AGG | - | chr1.3:53376186-53376205 | None:intergenic | 30.0% | |
| TAGTAGTCCAACAAAATTCA+AGG | + | chr1.3:53375977-53375996 | MS.gene82325:CDS | 30.0% | |
| TCAAATTCTCCACAGTAATT+AGG | - | chr1.3:53375843-53375862 | None:intergenic | 30.0% | |
| TCTCATTATTAAGCTATGTG+TGG | + | chr1.3:53374326-53374345 | MS.gene82325:intron | 30.0% | |
| ! | AAAAAGCCTAAGTTTAGCTT+TGG | + | chr1.3:53375933-53375952 | MS.gene82325:CDS | 30.0% |
| ! | AACTTAGGCTTTTTATCAAG+AGG | - | chr1.3:53375927-53375946 | None:intergenic | 30.0% |
| ! | ACTGTTGTTGTTATAGAAGT+AGG | + | chr1.3:53374773-53374792 | MS.gene82325:intron | 30.0% |
| ! | ATTTTCTATCTGTGAAAACG+CGG | + | chr1.3:53374979-53374998 | MS.gene82325:intron | 30.0% |
| ! | CTGTTGTTGTTATAGAAGTA+GGG | + | chr1.3:53374774-53374793 | MS.gene82325:intron | 30.0% |
| ! | TAATTTGTATACGTCGGTAA+AGG | + | chr1.3:53374156-53374175 | MS.gene82325:intron | 30.0% |
| !! | ATGATCTTGATTTGATTTGC+AGG | + | chr1.3:53375648-53375667 | MS.gene82325:CDS | 30.0% |
| !! | TGATCTTGATTTGATTTGCA+GGG | + | chr1.3:53375649-53375668 | MS.gene82325:CDS | 30.0% |
| AAATCCGTAGATACGGTTTA+TGG | - | chr1.3:53375321-53375340 | None:intergenic | 35.0% | |
| AAGATTATCTGTATGCATGG+TGG | + | chr1.3:53375434-53375453 | MS.gene82325:CDS | 35.0% | |
| AATAAATAATTCGAGCGAGG+AGG | - | chr1.3:53375179-53375198 | None:intergenic | 35.0% | |
| AGAATTGTGGAGTCCATAAA+GGG | - | chr1.3:53374869-53374888 | None:intergenic | 35.0% | |
| AGCATATATCAGACCCTTTA+TGG | + | chr1.3:53374853-53374872 | MS.gene82325:intron | 35.0% | |
| AGTGTGAAACTAAACATAGG+TGG | + | chr1.3:53375006-53375025 | MS.gene82325:intron | 35.0% | |
| ATGTTACCAGGAGATATTCA+TGG | + | chr1.3:53375110-53375129 | MS.gene82325:intron | 35.0% | |
| ATTTGCCAAGATTCGAAGTT+TGG | + | chr1.3:53374589-53374608 | MS.gene82325:intron | 35.0% | |
| CACAACAGTAATACATGTCA+AGG | - | chr1.3:53375060-53375079 | None:intergenic | 35.0% | |
| CGTGGAGTTTCATATACATT+TGG | + | chr1.3:53375593-53375612 | MS.gene82325:CDS | 35.0% | |
| CTTGACATGTATTACTGTTG+TGG | + | chr1.3:53375058-53375077 | MS.gene82325:intron | 35.0% | |
| CTTTATAGTTTAGCGAATCG+CGG | - | chr1.3:53374717-53374736 | None:intergenic | 35.0% | |
| GTCTATTATGTGACCTCTTA+TGG | + | chr1.3:53375528-53375547 | MS.gene82325:CDS | 35.0% | |
| TACACGGGAAAGTTGTAAAA+TGG | - | chr1.3:53376077-53376096 | None:intergenic | 35.0% | |
| TAGAATTGTGGAGTCCATAA+AGG | - | chr1.3:53374870-53374889 | None:intergenic | 35.0% | |
| TATTGACCATGAATATCTCC+TGG | - | chr1.3:53375119-53375138 | None:intergenic | 35.0% | |
| TCACATAATAGACCAGATTC+AGG | - | chr1.3:53375521-53375540 | None:intergenic | 35.0% | |
| TGTTATAGAAGTAGGGAGTA+GGG | + | chr1.3:53374781-53374800 | MS.gene82325:intron | 35.0% | |
| TTGTTATAGAAGTAGGGAGT+AGG | + | chr1.3:53374780-53374799 | MS.gene82325:intron | 35.0% | |
| TTGTTTCAATTGTTTGCCTG+TGG | + | chr1.3:53375394-53375413 | MS.gene82325:CDS | 35.0% | |
| ! | ATTTTACAACTTTCCCGTGT+AGG | + | chr1.3:53376076-53376095 | MS.gene82325:intron | 35.0% |
| ! | CAAAAAATGCTTGCTGAAAG+TGG | - | chr1.3:53376255-53376274 | None:intergenic | 35.0% |
| ! | TTTCTTTTTGTTGCAGGTTG+TGG | + | chr1.3:53375764-53375783 | MS.gene82325:intron | 35.0% |
| ! | TTTTCAGCACCTAATTACTG+TGG | + | chr1.3:53375831-53375850 | MS.gene82325:CDS | 35.0% |
| !! | ATATACATTTGGTGCCGATA+GGG | + | chr1.3:53375604-53375623 | MS.gene82325:CDS | 35.0% |
| !! | CAAAGGTGTTACATAGGTAA+AGG | - | chr1.3:53374616-53374635 | None:intergenic | 35.0% |
| !!! | ACTCTGAAAGCTCTGTTTTT+TGG | + | chr1.3:53374820-53374839 | MS.gene82325:intron | 35.0% |
| !!! | CACTTTCAGCAAGCATTTTT+TGG | + | chr1.3:53376253-53376272 | MS.gene82325:intron | 35.0% |
| !!! | TGAAAGCTCTGTTTTTTGGT+TGG | + | chr1.3:53374824-53374843 | MS.gene82325:intron | 35.0% |
| AAGGTCCAAACTTCGAATCT+TGG | - | chr1.3:53374597-53374616 | None:intergenic | 40.0% | |
| CTAGTTTCAAGAGATTAGGC+TGG | - | chr1.3:53374050-53374069 | None:intergenic | 40.0% | |
| GCCTAATCTCTTGAAACTAG+AGG | + | chr1.3:53374050-53374069 | MS.gene82325:CDS | 40.0% | |
| GCTTCCATAAACCGTATCTA+CGG | + | chr1.3:53375314-53375333 | MS.gene82325:CDS | 40.0% | |
| GGAGATACAATGTGAAGCTA+TGG | + | chr1.3:53375357-53375376 | MS.gene82325:CDS | 40.0% | |
| GTGCTTCCAAAGCTAAACTT+AGG | - | chr1.3:53375942-53375961 | None:intergenic | 40.0% | |
| TACTAGGATCAGACCATAAG+AGG | - | chr1.3:53375544-53375563 | None:intergenic | 40.0% | |
| TAGTAGTGATGTTCGTGGTT+GGG | + | chr1.3:53375559-53375578 | MS.gene82325:CDS | 40.0% | |
| TGAATACACAACTTGCACTG+AGG | + | chr1.3:53376013-53376032 | MS.gene82325:intron | 40.0% | |
| TGTGGAGAATTTGACAATGC+TGG | + | chr1.3:53375849-53375868 | MS.gene82325:CDS | 40.0% | |
| TTAGGAGACTATGTTGATCG+CGG | + | chr1.3:53375200-53375219 | MS.gene82325:CDS | 40.0% | |
| TTGAAGTAAGAGGAAGACCA+GGG | + | chr1.3:53373956-53373975 | MS.gene82325:CDS | 40.0% | |
| TTTCAATTGTTTGCCTGTGG+CGG | + | chr1.3:53375397-53375416 | MS.gene82325:CDS | 40.0% | |
| ! | AAAATGCTTGCTGAAAGTGG+AGG | - | chr1.3:53376252-53376271 | None:intergenic | 40.0% |
| ! | GCCTCTAGTTTCAAGAGATT+AGG | - | chr1.3:53374054-53374073 | None:intergenic | 40.0% |
| !! | AGGGATCAAAGGTGTTACAT+AGG | - | chr1.3:53374622-53374641 | None:intergenic | 40.0% |
| !! | CATATACATTTGGTGCCGAT+AGG | + | chr1.3:53375603-53375622 | MS.gene82325:CDS | 40.0% |
| !!! | AGCTCTGTTTTTTGGTTGGT+AGG | + | chr1.3:53374828-53374847 | MS.gene82325:intron | 40.0% |
| AACGGAGTACAAAGCCTACA+CGG | - | chr1.3:53376093-53376112 | None:intergenic | 45.0% | |
| AAGCAGGTTCAGCTTTCTGA+AGG | + | chr1.3:53373979-53373998 | MS.gene82325:CDS | 45.0% | |
| ACAACTTGCACTGAGGTAGA+GGG | + | chr1.3:53376020-53376039 | MS.gene82325:intron | 45.0% | |
| AGTAGTGATGTTCGTGGTTG+GGG | + | chr1.3:53375560-53375579 | MS.gene82325:CDS | 45.0% | |
| ATGGAACGTGGAGTTGTTGA+TGG | + | chr1.3:53373916-53373935 | MS.gene82325:CDS | 45.0% | |
| ATTCGTGGTTACCCCTTAGA+AGG | - | chr1.3:53375292-53375311 | None:intergenic | 45.0% | |
| CAACCACGAACATCACTACT+AGG | - | chr1.3:53375560-53375579 | None:intergenic | 45.0% | |
| CCAGATTCAGGAACTTCACA+CGG | - | chr1.3:53375509-53375528 | None:intergenic | 45.0% | |
| CTAGTAGTGATGTTCGTGGT+TGG | + | chr1.3:53375558-53375577 | MS.gene82325:CDS | 45.0% | |
| CTTGAAGTAAGAGGAAGACC+AGG | + | chr1.3:53373955-53373974 | MS.gene82325:CDS | 45.0% | |
| GATCCTAGTAGTGATGTTCG+TGG | + | chr1.3:53375554-53375573 | MS.gene82325:CDS | 45.0% | |
| GCTTGCAAATACAGCTGATG+TGG | + | chr1.3:53374487-53374506 | MS.gene82325:intron | 45.0% | |
| GTAGGGAGTAGGGATCAAAT+TGG | + | chr1.3:53374791-53374810 | MS.gene82325:intron | 45.0% | |
| GTCAATATTCCGACCTTCTG+AGG | + | chr1.3:53375132-53375151 | MS.gene82325:CDS | 45.0% | |
| GTCTATGCAATGACATCGCT+CGG | - | chr1.3:53374653-53374672 | None:intergenic | 45.0% | |
| TTGTTGCAGGTTGTGGAAGA+CGG | + | chr1.3:53375771-53375790 | MS.gene82325:intron | 45.0% | |
| ! | GAGGCACCTATTAAGATCTG+TGG | + | chr1.3:53374069-53374088 | MS.gene82325:CDS | 45.0% |
| ! | GGTTTATGGAAGCACATTCG+TGG | - | chr1.3:53375307-53375326 | None:intergenic | 45.0% |
| !! | TTTGATTTGCAGGGCTCATC+AGG | + | chr1.3:53375658-53375677 | MS.gene82325:CDS | 45.0% |
| !!! | CTTCTGAGGCTTTTCGAGTA+CGG | + | chr1.3:53375146-53375165 | MS.gene82325:CDS | 45.0% |
| ACATCGCTCGGTTGAGCTAA+GGG | - | chr1.3:53374641-53374660 | None:intergenic | 50.0% | |
| ACGGAGTACAAAGCCTACAC+GGG | - | chr1.3:53376092-53376111 | None:intergenic | 50.0% | |
| CACAACTTGCACTGAGGTAG+AGG | + | chr1.3:53376019-53376038 | MS.gene82325:intron | 50.0% | |
| CCGTGTGAAGTTCCTGAATC+TGG | + | chr1.3:53375506-53375525 | MS.gene82325:CDS | 50.0% | |
| CGGTTGAGCTAAGGGATCAA+AGG | - | chr1.3:53374633-53374652 | None:intergenic | 50.0% | |
| CGTACTCGAAAAGCCTCAGA+AGG | - | chr1.3:53375148-53375167 | None:intergenic | 50.0% | |
| CTCGAAAAGCCTCAGAAGGT+CGG | - | chr1.3:53375144-53375163 | None:intergenic | 50.0% | |
| AAGAGGAAGACCAGGGAAGC+AGG | + | chr1.3:53373963-53373982 | MS.gene82325:CDS | 55.0% | |
| GAAAGCTGAACCTGCTTCCC+TGG | - | chr1.3:53373976-53373995 | None:intergenic | 55.0% | |
| GACATCGCTCGGTTGAGCTA+AGG | - | chr1.3:53374642-53374661 | None:intergenic | 55.0% | |
| TCATCAATGAGAGCCGCCAC+AGG | - | chr1.3:53375413-53375432 | None:intergenic | 55.0% | |
| ! | TGTCTAGGGCGGTTGCAGTT+AGG | + | chr1.3:53374449-53374468 | MS.gene82325:intron | 55.0% |
| !!! | CTGAGGCTTTTCGAGTACGG+TGG | + | chr1.3:53375149-53375168 | MS.gene82325:CDS | 55.0% |
| GGTTGGGGAGAAAGCGAGCG+TGG | + | chr1.3:53375575-53375594 | MS.gene82325:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 53373916 | 53376288 | 53373916 | ID=MS.gene82325 |
| chr1.3 | mRNA | 53373916 | 53376288 | 53373916 | ID=MS.gene82325.t1;Parent=MS.gene82325 |
| chr1.3 | exon | 53373916 | 53374090 | 53373916 | ID=MS.gene82325.t1.exon1;Parent=MS.gene82325.t1 |
| chr1.3 | CDS | 53373916 | 53374090 | 53373916 | ID=cds.MS.gene82325.t1;Parent=MS.gene82325.t1 |
| chr1.3 | exon | 53375120 | 53375679 | 53375120 | ID=MS.gene82325.t1.exon2;Parent=MS.gene82325.t1 |
| chr1.3 | CDS | 53375120 | 53375679 | 53375120 | ID=cds.MS.gene82325.t1;Parent=MS.gene82325.t1 |
| chr1.3 | exon | 53375780 | 53375998 | 53375780 | ID=MS.gene82325.t1.exon3;Parent=MS.gene82325.t1 |
| chr1.3 | CDS | 53375780 | 53375998 | 53375780 | ID=cds.MS.gene82325.t1;Parent=MS.gene82325.t1 |
| chr1.3 | exon | 53376262 | 53376288 | 53376262 | ID=MS.gene82325.t1.exon4;Parent=MS.gene82325.t1 |
| chr1.3 | CDS | 53376262 | 53376288 | 53376262 | ID=cds.MS.gene82325.t1;Parent=MS.gene82325.t1 |
| Gene Sequence |
| Protein sequence |
