Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47801.t1 | XP_003597728.1 | 96.3 | 599 | 17 | 1 | 1 | 599 | 1 | 594 | 0.00E+00 | 1139.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47801.t1 | Q9M817 | 55.9 | 583 | 247 | 6 | 13 | 587 | 6 | 586 | 3.4e-187 | 656.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47801.t1 | Q2HU48 | 96.3 | 599 | 17 | 1 | 1 | 599 | 1 | 594 | 0.0e+00 | 1139.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049283 | MS.gene47801 | 0.807837 | 4.16E-50 | -1.69E-46 |
MS.gene049419 | MS.gene47801 | -0.806906 | 6.55E-50 | -1.69E-46 |
MS.gene050105 | MS.gene47801 | 0.827453 | 1.55E-54 | -1.69E-46 |
MS.gene050654 | MS.gene47801 | 0.807006 | 6.24E-50 | -1.69E-46 |
MS.gene051122 | MS.gene47801 | 0.850967 | 1.21E-60 | -1.69E-46 |
MS.gene051275 | MS.gene47801 | 0.822379 | 2.44E-53 | -1.69E-46 |
MS.gene051541 | MS.gene47801 | 0.842019 | 3.34E-58 | -1.69E-46 |
MS.gene05216 | MS.gene47801 | 0.81143 | 7.03E-51 | -1.69E-46 |
MS.gene052493 | MS.gene47801 | 0.801983 | 6.96E-49 | -1.69E-46 |
MS.gene052586 | MS.gene47801 | 0.807475 | 4.97E-50 | -1.69E-46 |
MS.gene052674 | MS.gene47801 | 0.83957 | 1.46E-57 | -1.69E-46 |
MS.gene052675 | MS.gene47801 | 0.835138 | 2.00E-56 | -1.69E-46 |
MS.gene052677 | MS.gene47801 | 0.839256 | 1.77E-57 | -1.69E-46 |
MS.gene053298 | MS.gene47801 | 0.811812 | 5.80E-51 | -1.69E-46 |
MS.gene054479 | MS.gene47801 | 0.832893 | 7.29E-56 | -1.69E-46 |
MS.gene054892 | MS.gene47801 | 0.808186 | 3.50E-50 | -1.69E-46 |
MS.gene054893 | MS.gene47801 | 0.809852 | 1.54E-50 | -1.69E-46 |
MS.gene055701 | MS.gene47801 | 0.803246 | 3.82E-49 | -1.69E-46 |
MS.gene056064 | MS.gene47801 | 0.807255 | 5.53E-50 | -1.69E-46 |
MS.gene056480 | MS.gene47801 | 0.80172 | 7.88E-49 | -1.69E-46 |
MS.gene058081 | MS.gene47801 | 0.817958 | 2.52E-52 | -1.69E-46 |
MS.gene058223 | MS.gene47801 | -0.848836 | 4.75E-60 | -1.69E-46 |
MS.gene058429 | MS.gene47801 | 0.859838 | 3.14E-63 | -1.69E-46 |
MS.gene060850 | MS.gene47801 | 0.864087 | 1.56E-64 | -1.69E-46 |
MS.gene060851 | MS.gene47801 | 0.887579 | 1.26E-72 | -1.69E-46 |
MS.gene060852 | MS.gene47801 | 0.884007 | 2.77E-71 | -1.69E-46 |
MS.gene060932 | MS.gene47801 | 0.809591 | 1.75E-50 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47801.t1 | MTR_2g101640 | 95.008 | 641 | 22 | 2 | 1 | 641 | 1 | 631 | 0.0 | 1250 |
MS.gene47801.t1 | MTR_2g101610 | 77.449 | 643 | 134 | 4 | 1 | 638 | 1 | 637 | 0.0 | 1025 |
MS.gene47801.t1 | MTR_2g101590 | 77.294 | 643 | 134 | 4 | 1 | 638 | 1 | 636 | 0.0 | 1020 |
MS.gene47801.t1 | MTR_2g101560 | 77.605 | 643 | 132 | 5 | 1 | 637 | 1 | 637 | 0.0 | 1001 |
MS.gene47801.t1 | MTR_4g011280 | 70.017 | 597 | 171 | 4 | 1 | 593 | 1 | 593 | 0.0 | 860 |
MS.gene47801.t1 | MTR_1g057460 | 72.049 | 576 | 135 | 5 | 1 | 576 | 24 | 573 | 0.0 | 847 |
MS.gene47801.t1 | MTR_1g057460 | 72.553 | 521 | 124 | 3 | 56 | 576 | 1 | 502 | 0.0 | 782 |
MS.gene47801.t1 | MTR_0236s0050 | 73.321 | 521 | 120 | 4 | 56 | 576 | 1 | 502 | 0.0 | 762 |
MS.gene47801.t1 | MTR_2g101650 | 57.560 | 582 | 239 | 4 | 1 | 580 | 1 | 576 | 0.0 | 705 |
MS.gene47801.t1 | MTR_8g103233 | 47.924 | 578 | 292 | 7 | 14 | 588 | 2 | 573 | 0.0 | 554 |
MS.gene47801.t1 | MTR_1g009200 | 48.443 | 578 | 288 | 7 | 12 | 586 | 11 | 581 | 0.0 | 536 |
MS.gene47801.t1 | MTR_1g026740 | 46.961 | 543 | 281 | 4 | 29 | 569 | 18 | 555 | 0.0 | 525 |
MS.gene47801.t1 | MTR_1g026750 | 46.114 | 579 | 295 | 6 | 12 | 588 | 6 | 569 | 3.22e-175 | 510 |
MS.gene47801.t1 | MTR_1g026770 | 47.436 | 546 | 273 | 7 | 29 | 569 | 16 | 552 | 4.32e-172 | 502 |
MS.gene47801.t1 | MTR_4g107510 | 37.522 | 565 | 343 | 8 | 11 | 567 | 19 | 581 | 4.98e-132 | 400 |
MS.gene47801.t1 | MTR_4g107580 | 35.914 | 607 | 363 | 11 | 9 | 603 | 7 | 599 | 2.96e-129 | 394 |
MS.gene47801.t1 | MTR_5g038060 | 36.394 | 599 | 360 | 11 | 2 | 586 | 5 | 596 | 8.02e-128 | 390 |
MS.gene47801.t1 | MTR_5g055000 | 34.965 | 572 | 356 | 8 | 26 | 590 | 16 | 578 | 1.92e-124 | 380 |
MS.gene47801.t1 | MTR_4g107530 | 35.512 | 566 | 354 | 9 | 11 | 567 | 15 | 578 | 4.37e-124 | 380 |
MS.gene47801.t1 | MTR_8g469480 | 36.077 | 571 | 339 | 9 | 31 | 584 | 41 | 602 | 8.62e-121 | 372 |
MS.gene47801.t1 | MTR_7g088790 | 35.067 | 596 | 355 | 15 | 28 | 612 | 29 | 603 | 2.33e-120 | 371 |
MS.gene47801.t1 | MTR_7g088820 | 32.705 | 584 | 370 | 12 | 24 | 596 | 21 | 592 | 5.48e-116 | 359 |
MS.gene47801.t1 | MTR_8g469470 | 34.477 | 583 | 361 | 11 | 1 | 567 | 1 | 578 | 1.25e-114 | 355 |
MS.gene47801.t1 | MTR_5g038190 | 33.392 | 566 | 360 | 9 | 10 | 567 | 9 | 565 | 1.60e-113 | 352 |
MS.gene47801.t1 | MTR_7g088825 | 32.190 | 612 | 387 | 14 | 12 | 612 | 10 | 604 | 4.48e-113 | 352 |
MS.gene47801.t1 | MTR_4g107610 | 32.323 | 594 | 374 | 12 | 12 | 590 | 18 | 598 | 7.44e-103 | 325 |
MS.gene47801.t1 | MTR_7g088820 | 31.919 | 542 | 346 | 12 | 66 | 596 | 1 | 530 | 1.30e-102 | 322 |
MS.gene47801.t1 | MTR_3g462710 | 33.692 | 558 | 345 | 13 | 26 | 571 | 22 | 566 | 3.12e-101 | 320 |
MS.gene47801.t1 | MTR_4g015080 | 34.229 | 558 | 344 | 12 | 20 | 567 | 24 | 568 | 2.38e-99 | 315 |
MS.gene47801.t1 | MTR_7g064780 | 30.508 | 590 | 387 | 12 | 12 | 587 | 8 | 588 | 1.41e-96 | 308 |
MS.gene47801.t1 | MTR_7g064800 | 32.130 | 554 | 358 | 9 | 19 | 561 | 17 | 563 | 1.76e-96 | 308 |
MS.gene47801.t1 | MTR_7g067010 | 33.755 | 554 | 340 | 10 | 20 | 561 | 14 | 552 | 1.75e-95 | 305 |
MS.gene47801.t1 | MTR_1g009170 | 39.597 | 447 | 201 | 11 | 151 | 594 | 5 | 385 | 2.72e-95 | 298 |
MS.gene47801.t1 | MTR_5g012270 | 31.634 | 569 | 359 | 10 | 26 | 580 | 27 | 579 | 9.09e-95 | 303 |
MS.gene47801.t1 | MTR_7g088820 | 32.106 | 489 | 309 | 12 | 119 | 596 | 6 | 482 | 3.45e-92 | 294 |
MS.gene47801.t1 | MTR_1g075440 | 31.070 | 589 | 363 | 15 | 20 | 586 | 18 | 585 | 5.17e-86 | 281 |
MS.gene47801.t1 | MTR_3g112460 | 31.218 | 583 | 353 | 18 | 26 | 595 | 21 | 568 | 9.54e-86 | 280 |
MS.gene47801.t1 | MTR_7g098200 | 30.474 | 548 | 357 | 9 | 37 | 573 | 38 | 572 | 1.81e-85 | 280 |
MS.gene47801.t1 | MTR_7g098200 | 30.515 | 544 | 352 | 8 | 37 | 573 | 38 | 562 | 2.11e-85 | 279 |
MS.gene47801.t1 | MTR_3g112470 | 31.732 | 583 | 350 | 18 | 26 | 595 | 21 | 568 | 3.01e-85 | 278 |
MS.gene47801.t1 | MTR_4g114340 | 31.383 | 564 | 374 | 9 | 26 | 586 | 22 | 575 | 5.88e-85 | 278 |
MS.gene47801.t1 | MTR_3g112450 | 31.858 | 565 | 353 | 13 | 26 | 581 | 21 | 562 | 1.83e-84 | 276 |
MS.gene47801.t1 | MTR_7g098220 | 31.217 | 567 | 355 | 9 | 37 | 593 | 39 | 580 | 2.84e-84 | 276 |
MS.gene47801.t1 | MTR_3g069500 | 31.065 | 573 | 363 | 12 | 25 | 590 | 31 | 578 | 7.58e-84 | 275 |
MS.gene47801.t1 | MTR_5g012290 | 30.521 | 557 | 364 | 10 | 24 | 567 | 21 | 567 | 2.26e-83 | 274 |
MS.gene47801.t1 | MTR_3g072300 | 32.593 | 540 | 341 | 12 | 37 | 567 | 33 | 558 | 3.64e-83 | 273 |
MS.gene47801.t1 | MTR_7g098220 | 31.183 | 558 | 349 | 9 | 46 | 593 | 4 | 536 | 1.77e-82 | 270 |
MS.gene47801.t1 | MTR_7g098230 | 29.735 | 565 | 373 | 9 | 42 | 595 | 40 | 591 | 5.80e-82 | 270 |
MS.gene47801.t1 | MTR_2g017750 | 29.965 | 574 | 381 | 13 | 28 | 585 | 34 | 602 | 8.07e-82 | 270 |
MS.gene47801.t1 | MTR_3g462710 | 33.621 | 464 | 285 | 12 | 114 | 567 | 1 | 451 | 1.72e-81 | 265 |
MS.gene47801.t1 | MTR_7g098040 | 30.896 | 547 | 352 | 9 | 37 | 572 | 43 | 574 | 2.68e-81 | 269 |
MS.gene47801.t1 | MTR_4g033325 | 31.657 | 537 | 331 | 8 | 37 | 567 | 40 | 546 | 3.11e-81 | 267 |
MS.gene47801.t1 | MTR_7g098090 | 29.983 | 587 | 366 | 12 | 37 | 596 | 42 | 610 | 4.21e-81 | 268 |
MS.gene47801.t1 | MTR_7g005930 | 31.699 | 571 | 356 | 14 | 27 | 583 | 34 | 584 | 1.12e-80 | 266 |
MS.gene47801.t1 | MTR_4g101380 | 28.843 | 579 | 383 | 12 | 26 | 589 | 25 | 589 | 1.46e-80 | 266 |
MS.gene47801.t1 | MTR_4g033315 | 32.072 | 555 | 336 | 16 | 23 | 567 | 25 | 548 | 2.92e-80 | 265 |
MS.gene47801.t1 | MTR_4g033310 | 32.072 | 555 | 336 | 16 | 23 | 567 | 25 | 548 | 2.92e-80 | 265 |
MS.gene47801.t1 | MTR_7g098160 | 29.116 | 577 | 379 | 10 | 37 | 596 | 42 | 605 | 7.91e-80 | 265 |
MS.gene47801.t1 | MTR_5g085850 | 30.565 | 566 | 365 | 10 | 26 | 585 | 28 | 571 | 1.15e-79 | 264 |
MS.gene47801.t1 | MTR_2g093160 | 32.180 | 578 | 347 | 14 | 1 | 567 | 1 | 544 | 1.23e-79 | 263 |
MS.gene47801.t1 | MTR_3g100980 | 31.542 | 577 | 363 | 13 | 19 | 582 | 5 | 562 | 3.25e-79 | 262 |
MS.gene47801.t1 | MTR_3g069440 | 31.173 | 571 | 369 | 13 | 25 | 587 | 29 | 583 | 4.13e-79 | 262 |
MS.gene47801.t1 | MTR_1g085090 | 29.885 | 609 | 392 | 14 | 12 | 612 | 3 | 584 | 4.30e-79 | 263 |
MS.gene47801.t1 | MTR_5g014150 | 28.804 | 552 | 379 | 9 | 38 | 582 | 54 | 598 | 1.29e-78 | 261 |
MS.gene47801.t1 | MTR_4g019580 | 29.768 | 561 | 365 | 14 | 37 | 587 | 45 | 586 | 2.90e-78 | 260 |
MS.gene47801.t1 | MTR_1g041835 | 30.939 | 543 | 346 | 12 | 37 | 567 | 36 | 561 | 4.12e-78 | 259 |
MS.gene47801.t1 | MTR_1g041815 | 31.228 | 570 | 352 | 15 | 37 | 588 | 36 | 583 | 6.21e-78 | 259 |
MS.gene47801.t1 | MTR_1g042310 | 29.948 | 581 | 368 | 16 | 26 | 588 | 24 | 583 | 6.97e-78 | 259 |
MS.gene47801.t1 | MTR_2g093640 | 32.297 | 579 | 345 | 13 | 1 | 567 | 1 | 544 | 8.56e-78 | 258 |
MS.gene47801.t1 | MTR_7g013270 | 32.123 | 551 | 348 | 9 | 27 | 567 | 89 | 623 | 1.11e-77 | 260 |
MS.gene47801.t1 | MTR_7g006540 | 31.303 | 591 | 368 | 15 | 28 | 595 | 63 | 638 | 1.89e-77 | 259 |
MS.gene47801.t1 | MTR_3g069420 | 31.150 | 565 | 364 | 11 | 37 | 593 | 43 | 590 | 3.30e-77 | 257 |
MS.gene47801.t1 | MTR_3g014790 | 30.769 | 572 | 330 | 12 | 20 | 564 | 9 | 541 | 3.77e-77 | 256 |
MS.gene47801.t1 | MTR_2g093180 | 31.315 | 578 | 353 | 12 | 1 | 567 | 1 | 545 | 8.30e-77 | 255 |
MS.gene47801.t1 | MTR_7g065080 | 28.885 | 592 | 381 | 16 | 11 | 586 | 8 | 575 | 9.22e-77 | 256 |
MS.gene47801.t1 | MTR_3g005010 | 30.459 | 545 | 338 | 8 | 29 | 567 | 31 | 540 | 3.09e-76 | 253 |
MS.gene47801.t1 | MTR_8g038880 | 31.882 | 574 | 348 | 9 | 28 | 588 | 20 | 563 | 3.20e-76 | 254 |
MS.gene47801.t1 | MTR_1g042310 | 30.481 | 561 | 351 | 16 | 46 | 588 | 7 | 546 | 3.39e-76 | 254 |
MS.gene47801.t1 | MTR_7g098180 | 30.220 | 546 | 342 | 11 | 37 | 564 | 40 | 564 | 1.13e-75 | 253 |
MS.gene47801.t1 | MTR_1g116930 | 28.670 | 579 | 390 | 10 | 14 | 584 | 9 | 572 | 1.89e-75 | 253 |
MS.gene47801.t1 | MTR_1g042310 | 30.357 | 560 | 351 | 16 | 47 | 588 | 1 | 539 | 2.02e-75 | 251 |
MS.gene47801.t1 | MTR_0294s0020 | 30.812 | 542 | 329 | 12 | 37 | 567 | 40 | 546 | 2.32e-75 | 251 |
MS.gene47801.t1 | MTR_2g005130 | 29.474 | 570 | 368 | 13 | 29 | 591 | 41 | 583 | 3.53e-74 | 249 |
MS.gene47801.t1 | MTR_4g033330 | 31.489 | 524 | 321 | 13 | 37 | 552 | 40 | 533 | 3.74e-74 | 248 |
MS.gene47801.t1 | MTR_8g087810 | 32.168 | 572 | 359 | 15 | 26 | 574 | 19 | 584 | 3.76e-74 | 249 |
MS.gene47801.t1 | MTR_1g041875 | 30.627 | 542 | 331 | 15 | 26 | 550 | 27 | 540 | 9.31e-74 | 248 |
MS.gene47801.t1 | MTR_3g100980 | 30.083 | 605 | 363 | 15 | 19 | 582 | 5 | 590 | 1.20e-73 | 248 |
MS.gene47801.t1 | MTR_7g065080 | 30.137 | 511 | 323 | 15 | 86 | 586 | 2 | 488 | 9.26e-73 | 243 |
MS.gene47801.t1 | MTR_7g111260 | 29.188 | 579 | 375 | 12 | 12 | 583 | 3 | 553 | 2.03e-71 | 242 |
MS.gene47801.t1 | MTR_4g033325 | 30.917 | 469 | 288 | 8 | 105 | 567 | 10 | 448 | 4.49e-71 | 237 |
MS.gene47801.t1 | MTR_1g041885 | 29.423 | 520 | 324 | 15 | 47 | 550 | 1 | 493 | 5.67e-71 | 239 |
MS.gene47801.t1 | MTR_8g087780 | 30.769 | 533 | 346 | 12 | 26 | 541 | 19 | 545 | 7.56e-71 | 240 |
MS.gene47801.t1 | MTR_7g098200 | 30.361 | 471 | 304 | 9 | 114 | 573 | 1 | 458 | 1.58e-70 | 237 |
MS.gene47801.t1 | MTR_4g098800 | 28.839 | 534 | 363 | 9 | 38 | 564 | 46 | 569 | 5.64e-70 | 238 |
MS.gene47801.t1 | MTR_4g098800 | 28.839 | 534 | 363 | 9 | 38 | 564 | 111 | 634 | 2.05e-69 | 238 |
MS.gene47801.t1 | MTR_4g033375 | 30.600 | 500 | 312 | 9 | 24 | 515 | 26 | 498 | 1.53e-68 | 232 |
MS.gene47801.t1 | MTR_4g033325 | 31.871 | 433 | 270 | 7 | 141 | 567 | 9 | 422 | 1.95e-68 | 229 |
MS.gene47801.t1 | MTR_4g033395 | 31.134 | 485 | 301 | 10 | 37 | 515 | 41 | 498 | 2.37e-68 | 231 |
MS.gene47801.t1 | MTR_7g010820 | 29.590 | 561 | 367 | 13 | 1 | 547 | 2 | 548 | 3.49e-67 | 230 |
MS.gene47801.t1 | MTR_4g033385 | 30.369 | 461 | 288 | 10 | 113 | 567 | 16 | 449 | 1.98e-65 | 222 |
MS.gene47801.t1 | MTR_4g107670 | 27.965 | 565 | 358 | 16 | 28 | 566 | 24 | 565 | 3.14e-60 | 211 |
MS.gene47801.t1 | MTR_4g123537 | 28.975 | 566 | 369 | 15 | 12 | 567 | 25 | 567 | 2.10e-57 | 204 |
MS.gene47801.t1 | MTR_5g038380 | 25.760 | 559 | 377 | 7 | 28 | 566 | 28 | 568 | 5.99e-57 | 202 |
MS.gene47801.t1 | MTR_8g469310 | 26.538 | 569 | 359 | 15 | 28 | 566 | 26 | 565 | 1.85e-56 | 201 |
MS.gene47801.t1 | MTR_7g098210 | 26.996 | 526 | 286 | 12 | 47 | 564 | 1 | 436 | 5.67e-51 | 183 |
MS.gene47801.t1 | MTR_6g008690 | 25.874 | 572 | 355 | 15 | 23 | 567 | 5 | 534 | 6.70e-49 | 179 |
MS.gene47801.t1 | MTR_7g098150 | 28.146 | 437 | 282 | 11 | 37 | 459 | 42 | 460 | 2.26e-47 | 174 |
MS.gene47801.t1 | MTR_4g033310 | 31.481 | 324 | 201 | 7 | 248 | 567 | 178 | 484 | 5.30e-45 | 167 |
MS.gene47801.t1 | MTR_4g033310 | 34.615 | 182 | 104 | 6 | 23 | 202 | 25 | 193 | 2.79e-16 | 82.4 |
MS.gene47801.t1 | MTR_4g024930 | 24.727 | 550 | 375 | 14 | 26 | 567 | 34 | 552 | 3.19e-39 | 152 |
MS.gene47801.t1 | MTR_7g052600 | 25.138 | 545 | 363 | 10 | 26 | 567 | 23 | 525 | 8.36e-38 | 147 |
MS.gene47801.t1 | MTR_7g051880 | 24.421 | 561 | 378 | 11 | 4 | 561 | 2 | 519 | 7.19e-35 | 139 |
MS.gene47801.t1 | MTR_7g051830 | 24.064 | 561 | 380 | 11 | 4 | 561 | 2 | 519 | 5.85e-33 | 133 |
MS.gene47801.t1 | MTR_8g091265 | 39.683 | 126 | 70 | 4 | 297 | 418 | 3 | 126 | 3.20e-19 | 85.1 |
MS.gene47801.t1 | MTR_7g064160 | 28.571 | 112 | 78 | 1 | 3 | 112 | 2 | 113 | 2.88e-13 | 67.4 |
MS.gene47801.t1 | MTR_3g065350 | 27.108 | 166 | 111 | 5 | 339 | 502 | 1 | 158 | 3.08e-13 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47801.t1 | AT1G52190 | 56.089 | 583 | 245 | 7 | 13 | 587 | 6 | 585 | 0.0 | 688 |
MS.gene47801.t1 | AT3G16180 | 56.098 | 574 | 240 | 8 | 23 | 587 | 15 | 585 | 0.0 | 665 |
MS.gene47801.t1 | AT1G69870 | 35.163 | 583 | 363 | 8 | 22 | 597 | 45 | 619 | 2.97e-125 | 384 |
MS.gene47801.t1 | AT1G68570 | 37.197 | 578 | 349 | 9 | 18 | 586 | 13 | 585 | 9.99e-123 | 377 |
MS.gene47801.t1 | AT5G62680 | 35.642 | 592 | 357 | 13 | 18 | 594 | 33 | 615 | 2.76e-118 | 366 |
MS.gene47801.t1 | AT1G68570 | 36.511 | 556 | 339 | 9 | 40 | 586 | 5 | 555 | 1.64e-112 | 349 |
MS.gene47801.t1 | AT3G47960 | 35.315 | 555 | 346 | 9 | 23 | 567 | 54 | 605 | 4.48e-112 | 350 |
MS.gene47801.t1 | AT1G18880 | 33.670 | 594 | 364 | 14 | 18 | 595 | 7 | 586 | 1.97e-110 | 344 |
MS.gene47801.t1 | AT1G27080 | 33.966 | 580 | 345 | 12 | 19 | 584 | 5 | 560 | 2.52e-109 | 341 |
MS.gene47801.t1 | AT5G11570 | 39.162 | 549 | 240 | 17 | 29 | 568 | 14 | 477 | 5.48e-105 | 327 |
MS.gene47801.t1 | AT1G62200 | 35.165 | 546 | 332 | 9 | 26 | 563 | 50 | 581 | 1.55e-104 | 329 |
MS.gene47801.t1 | AT2G02040 | 35.165 | 546 | 333 | 12 | 26 | 561 | 39 | 573 | 1.83e-103 | 326 |
MS.gene47801.t1 | AT5G28470 | 33.889 | 540 | 344 | 8 | 26 | 560 | 15 | 546 | 2.09e-103 | 325 |
MS.gene47801.t1 | AT1G27080 | 33.948 | 542 | 320 | 12 | 57 | 584 | 1 | 518 | 1.55e-100 | 317 |
MS.gene47801.t1 | AT5G28470 | 33.704 | 540 | 343 | 9 | 26 | 560 | 15 | 544 | 2.11e-100 | 317 |
MS.gene47801.t1 | AT1G62200 | 33.565 | 575 | 331 | 10 | 26 | 563 | 50 | 610 | 1.35e-99 | 317 |
MS.gene47801.t1 | AT3G54140 | 32.914 | 556 | 356 | 10 | 20 | 567 | 14 | 560 | 1.45e-99 | 316 |
MS.gene47801.t1 | AT3G54140 | 32.914 | 556 | 356 | 10 | 20 | 567 | 14 | 560 | 1.45e-99 | 316 |
MS.gene47801.t1 | AT1G62200 | 33.565 | 575 | 331 | 10 | 26 | 563 | 64 | 624 | 1.69e-99 | 317 |
MS.gene47801.t1 | AT3G45650 | 33.945 | 545 | 333 | 9 | 26 | 567 | 20 | 540 | 1.25e-95 | 305 |
MS.gene47801.t1 | AT5G01180 | 31.986 | 569 | 361 | 13 | 11 | 565 | 3 | 559 | 1.20e-94 | 303 |
MS.gene47801.t1 | AT5G01180 | 31.986 | 569 | 361 | 13 | 11 | 565 | 3 | 559 | 1.20e-94 | 303 |
MS.gene47801.t1 | AT5G01180 | 31.986 | 569 | 361 | 13 | 11 | 565 | 3 | 559 | 1.20e-94 | 303 |
MS.gene47801.t1 | AT3G45660 | 33.569 | 566 | 340 | 11 | 27 | 588 | 20 | 553 | 9.81e-93 | 297 |
MS.gene47801.t1 | AT3G45660 | 33.569 | 566 | 340 | 11 | 27 | 588 | 20 | 553 | 9.81e-93 | 297 |
MS.gene47801.t1 | AT3G45660 | 33.569 | 566 | 340 | 11 | 27 | 588 | 41 | 574 | 1.69e-92 | 297 |
MS.gene47801.t1 | AT1G69860 | 32.609 | 552 | 341 | 10 | 26 | 567 | 16 | 546 | 9.27e-91 | 292 |
MS.gene47801.t1 | AT3G45650 | 32.399 | 571 | 333 | 10 | 26 | 567 | 20 | 566 | 6.85e-90 | 291 |
MS.gene47801.t1 | AT2G26690 | 32.099 | 567 | 367 | 10 | 26 | 586 | 22 | 576 | 1.33e-88 | 287 |
MS.gene47801.t1 | AT3G45720 | 31.570 | 567 | 352 | 11 | 28 | 589 | 19 | 554 | 2.77e-87 | 283 |
MS.gene47801.t1 | AT2G02020 | 31.993 | 547 | 321 | 10 | 26 | 567 | 40 | 540 | 3.19e-87 | 283 |
MS.gene47801.t1 | AT3G54450 | 31.304 | 575 | 352 | 9 | 26 | 587 | 10 | 554 | 3.85e-87 | 283 |
MS.gene47801.t1 | AT2G26690 | 32.123 | 551 | 356 | 10 | 42 | 586 | 5 | 543 | 7.20e-86 | 279 |
MS.gene47801.t1 | AT3G45710 | 30.969 | 578 | 361 | 11 | 22 | 593 | 15 | 560 | 2.58e-84 | 275 |
MS.gene47801.t1 | AT5G46050 | 30.978 | 552 | 354 | 11 | 11 | 550 | 8 | 544 | 6.06e-84 | 275 |
MS.gene47801.t1 | AT1G33440 | 31.826 | 597 | 360 | 13 | 28 | 611 | 38 | 600 | 1.58e-83 | 275 |
MS.gene47801.t1 | AT2G26690 | 32.228 | 543 | 350 | 10 | 50 | 586 | 1 | 531 | 1.66e-83 | 272 |
MS.gene47801.t1 | AT3G45700 | 30.769 | 572 | 351 | 11 | 28 | 593 | 16 | 548 | 1.59e-82 | 270 |
MS.gene47801.t1 | AT3G45680 | 32.258 | 558 | 342 | 12 | 18 | 567 | 10 | 539 | 2.90e-82 | 270 |
MS.gene47801.t1 | AT2G40460 | 31.843 | 559 | 342 | 15 | 37 | 585 | 33 | 562 | 3.02e-81 | 268 |
MS.gene47801.t1 | AT1G12110 | 31.757 | 592 | 368 | 13 | 12 | 584 | 9 | 583 | 4.00e-80 | 265 |
MS.gene47801.t1 | AT5G46040 | 30.682 | 528 | 333 | 9 | 37 | 550 | 36 | 544 | 2.36e-79 | 263 |
MS.gene47801.t1 | AT1G59740 | 30.532 | 583 | 374 | 14 | 12 | 581 | 26 | 590 | 2.60e-79 | 263 |
MS.gene47801.t1 | AT3G21670 | 29.947 | 571 | 375 | 10 | 26 | 590 | 27 | 578 | 8.83e-78 | 259 |
MS.gene47801.t1 | AT1G32450 | 28.873 | 568 | 384 | 11 | 38 | 590 | 47 | 609 | 4.51e-77 | 258 |
MS.gene47801.t1 | AT5G13400 | 32.092 | 564 | 347 | 13 | 20 | 561 | 53 | 602 | 9.89e-76 | 254 |
MS.gene47801.t1 | AT3G53960 | 29.590 | 561 | 367 | 12 | 37 | 585 | 46 | 590 | 1.21e-74 | 251 |
MS.gene47801.t1 | AT4G21680 | 28.718 | 585 | 384 | 13 | 1 | 567 | 1 | 570 | 5.57e-73 | 246 |
MS.gene47801.t1 | AT1G22540 | 30.713 | 547 | 349 | 7 | 26 | 567 | 28 | 549 | 7.22e-73 | 245 |
MS.gene47801.t1 | AT2G37900 | 28.336 | 547 | 365 | 12 | 25 | 564 | 34 | 560 | 1.03e-71 | 242 |
MS.gene47801.t1 | AT5G46050 | 32.438 | 447 | 277 | 10 | 114 | 550 | 1 | 432 | 1.57e-71 | 239 |
MS.gene47801.t1 | AT1G72125 | 30.129 | 541 | 343 | 9 | 37 | 567 | 38 | 553 | 7.77e-71 | 239 |
MS.gene47801.t1 | AT2G02020 | 29.779 | 544 | 316 | 12 | 26 | 567 | 40 | 519 | 5.55e-69 | 234 |
MS.gene47801.t1 | AT1G72140 | 29.423 | 537 | 327 | 9 | 37 | 559 | 43 | 541 | 6.07e-69 | 234 |
MS.gene47801.t1 | AT2G37900 | 28.252 | 492 | 327 | 11 | 79 | 564 | 10 | 481 | 6.21e-67 | 228 |
MS.gene47801.t1 | AT1G27040 | 29.197 | 548 | 360 | 11 | 28 | 566 | 27 | 555 | 6.62e-67 | 229 |
MS.gene47801.t1 | AT1G27040 | 29.197 | 548 | 360 | 11 | 28 | 566 | 23 | 551 | 8.36e-67 | 229 |
MS.gene47801.t1 | AT1G22550 | 30.144 | 554 | 357 | 10 | 30 | 574 | 32 | 564 | 1.40e-66 | 228 |
MS.gene47801.t1 | AT3G45690 | 27.959 | 583 | 339 | 16 | 9 | 586 | 4 | 510 | 4.94e-65 | 223 |
MS.gene47801.t1 | AT1G22570 | 30.038 | 526 | 338 | 9 | 30 | 546 | 32 | 536 | 5.29e-65 | 224 |
MS.gene47801.t1 | AT5G19640 | 27.604 | 576 | 381 | 13 | 29 | 594 | 60 | 609 | 2.18e-64 | 223 |
MS.gene47801.t1 | AT1G27040 | 29.104 | 536 | 352 | 11 | 40 | 566 | 7 | 523 | 9.60e-63 | 217 |
MS.gene47801.t1 | AT1G22570 | 29.767 | 514 | 331 | 9 | 42 | 546 | 7 | 499 | 1.12e-62 | 217 |
MS.gene47801.t1 | AT1G72130 | 27.899 | 552 | 344 | 9 | 26 | 567 | 23 | 530 | 2.91e-62 | 216 |
MS.gene47801.t1 | AT1G72120 | 29.259 | 540 | 345 | 9 | 37 | 567 | 38 | 549 | 5.01e-60 | 210 |
MS.gene47801.t1 | AT5G14940 | 28.980 | 559 | 348 | 14 | 26 | 563 | 5 | 535 | 6.33e-59 | 207 |
MS.gene47801.t1 | AT1G69850 | 26.439 | 556 | 385 | 11 | 28 | 566 | 25 | 573 | 2.54e-55 | 198 |
MS.gene47801.t1 | AT3G01350 | 27.428 | 587 | 369 | 18 | 26 | 586 | 5 | 560 | 3.09e-55 | 197 |
MS.gene47801.t1 | AT3G25260 | 26.007 | 546 | 343 | 13 | 28 | 566 | 21 | 512 | 3.40e-50 | 182 |
MS.gene47801.t1 | AT1G72130 | 27.477 | 444 | 278 | 8 | 134 | 567 | 3 | 412 | 5.24e-49 | 177 |
MS.gene47801.t1 | AT1G72130 | 27.477 | 444 | 278 | 8 | 134 | 567 | 3 | 412 | 5.24e-49 | 177 |
MS.gene47801.t1 | AT5G62730 | 25.806 | 558 | 361 | 16 | 28 | 566 | 56 | 579 | 1.49e-43 | 165 |
MS.gene47801.t1 | AT5G62730 | 25.451 | 554 | 360 | 16 | 32 | 566 | 1 | 520 | 3.32e-41 | 157 |
MS.gene47801.t1 | AT3G25280 | 25.437 | 515 | 337 | 10 | 55 | 566 | 48 | 518 | 1.26e-40 | 155 |
MS.gene47801.t1 | AT2G38100 | 25.091 | 550 | 340 | 17 | 56 | 584 | 2 | 500 | 6.95e-30 | 124 |
MS.gene47801.t1 | AT2G38100 | 25.091 | 550 | 340 | 17 | 56 | 584 | 18 | 516 | 1.78e-29 | 123 |
MS.gene47801.t1 | AT2G38100 | 25.046 | 543 | 349 | 17 | 56 | 584 | 24 | 522 | 2.97e-29 | 122 |
Find 138 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCAAAACCCTATGGTTAT+TGG | 0.182926 | 2.1:+3486206 | None:intergenic |
GATCATTGTGGTTGGAAAAT+TGG | 0.188700 | 2.1:-3486108 | MS.gene47801:CDS |
TGAGGTGATATGTCTGTTTA+AGG | 0.190010 | 2.1:+3484966 | None:intergenic |
GAACAAAGCTTGTGTTATTA+AGG | 0.199255 | 2.1:-3485160 | MS.gene47801:CDS |
CCAATTCCCATTCTTATCTT+TGG | 0.217832 | 2.1:+3484814 | None:intergenic |
TTTCATTGCAGATTCTTATC+TGG | 0.222306 | 2.1:-3487489 | MS.gene47801:CDS |
CTTTGTAATAGAATTCATTT+TGG | 0.236499 | 2.1:+3484614 | None:intergenic |
GCTTGCACCTCAACTTTGTT+TGG | 0.243018 | 2.1:-3484668 | MS.gene47801:CDS |
TTAGTTTGCAGTTGGGCTTA+TGG | 0.263352 | 2.1:-3484376 | MS.gene47801:CDS |
CTTAACATTGGTGGATCATT+TGG | 0.268401 | 2.1:-3485006 | MS.gene47801:CDS |
ACTTGCAAGGATGGCAAGTT+TGG | 0.274733 | 2.1:-3487630 | MS.gene47801:CDS |
TCTGCTTCCCTTTGTGGATT+GGG | 0.283571 | 2.1:-3484565 | MS.gene47801:CDS |
TGGTAGGTTCAATATTTATA+TGG | 0.289622 | 2.1:-3484906 | MS.gene47801:CDS |
TCCAAAACCCTATGGTTATT+GGG | 0.290253 | 2.1:+3486207 | None:intergenic |
CTTGCACCTCAACTTTGTTT+GGG | 0.292334 | 2.1:-3484667 | MS.gene47801:CDS |
TGTATTTCATGGGAAGTTAC+AGG | 0.295046 | 2.1:-3487586 | MS.gene47801:CDS |
TCCCAATAACCATAGGGTTT+TGG | 0.296059 | 2.1:-3486208 | MS.gene47801:CDS |
CGTTTCCTAGGTGTTGGATT+AGG | 0.313860 | 2.1:-3487464 | MS.gene47801:CDS |
AAAAGAACCAGCTTGATTAC+TGG | 0.314348 | 2.1:-3486006 | MS.gene47801:CDS |
ATCTTTGGACTGATCCTAAC+TGG | 0.325470 | 2.1:+3484829 | None:intergenic |
AGTATTTCTGCTTCCCTTTG+TGG | 0.327236 | 2.1:-3484571 | MS.gene47801:CDS |
AGGTTCATTTGTCAGTTTCC+TGG | 0.327540 | 2.1:-3487444 | MS.gene47801:intron |
CAACATGATATTGTATTTCA+TGG | 0.333002 | 2.1:-3487597 | MS.gene47801:CDS |
ATCACCATGCCTTTCATCAT+TGG | 0.334156 | 2.1:-3487893 | MS.gene47801:intron |
TTCTGCTTCCCTTTGTGGAT+TGG | 0.335113 | 2.1:-3484566 | MS.gene47801:CDS |
CTTTCATGTTCCATTGCATT+TGG | 0.341589 | 2.1:-3486258 | MS.gene47801:CDS |
TCAAATTTACCATCACAAAA+AGG | 0.352676 | 2.1:-3485917 | MS.gene47801:CDS |
GTCAAGATTAGTGAAGAAAA+TGG | 0.355594 | 2.1:-3484181 | MS.gene47801:CDS |
CACGGAGGCGGCCGTGCTGC+TGG | 0.357097 | 2.1:+3486375 | None:intergenic |
TACAGTTGATCAAGTATCTA+AGG | 0.357491 | 2.1:-3484350 | MS.gene47801:CDS |
TTGTTAGAGTTATTCCATTA+TGG | 0.358457 | 2.1:-3485050 | MS.gene47801:CDS |
CCAAAGATAAGAATGGGAAT+TGG | 0.367717 | 2.1:-3484814 | MS.gene47801:CDS |
AGTGATGAAACTAGTTCAAA+TGG | 0.371589 | 2.1:-3484250 | MS.gene47801:CDS |
TTCATTGCAGATTCTTATCT+GGG | 0.389095 | 2.1:-3487488 | MS.gene47801:CDS |
GTTATTCCATTATGGTCTAC+AGG | 0.396747 | 2.1:-3485042 | MS.gene47801:CDS |
TTTGTGATCTTGACATAAAG+AGG | 0.399723 | 2.1:+3486027 | None:intergenic |
CTGGGTCGTTTCCTAGGTGT+TGG | 0.410951 | 2.1:-3487470 | MS.gene47801:CDS |
CTTGCAAGGATGGCAAGTTT+GGG | 0.411221 | 2.1:-3487629 | MS.gene47801:CDS |
AGCGAAGCATTCAATGCTAT+TGG | 0.413708 | 2.1:-3484637 | MS.gene47801:CDS |
CGGCCGTGCTGCTGGAATCA+TGG | 0.414287 | 2.1:+3486383 | None:intergenic |
CAAAGATAAGAATGGGAATT+GGG | 0.414668 | 2.1:-3484813 | MS.gene47801:CDS |
TTCCCTTTGTGGATTGGGAA+TGG | 0.416130 | 2.1:-3484560 | MS.gene47801:CDS |
TTCTGTTGATGATGATGAAA+TGG | 0.416797 | 2.1:-3487966 | MS.gene47801:CDS |
GAGAAGAATCTGAGTAGCTT+TGG | 0.416901 | 2.1:+3487553 | None:intergenic |
TCGTTACGACAGGTACTATA+TGG | 0.420888 | 2.1:-3484437 | MS.gene47801:CDS |
GCAATGTTACTCTCTGCCTT+TGG | 0.420989 | 2.1:-3486306 | MS.gene47801:CDS |
TCTTATCTGGGTCGTTTCCT+AGG | 0.421802 | 2.1:-3487476 | MS.gene47801:CDS |
ATGAAATACAATATCATGTT+GGG | 0.421958 | 2.1:+3487599 | None:intergenic |
TGCTGGTACTTCAAAGTTTG+AGG | 0.423718 | 2.1:+3484948 | None:intergenic |
ATGATCCCTGTAGACCATAA+TGG | 0.433520 | 2.1:+3485036 | None:intergenic |
AGACCACCCTTGCGTCTTTG+AGG | 0.440202 | 2.1:+3487917 | None:intergenic |
TGTGGTTGGAAAATTGGTTT+CGG | 0.447002 | 2.1:-3486102 | MS.gene47801:CDS |
GAATCAACCTCATTAATACT+TGG | 0.449875 | 2.1:+3484138 | None:intergenic |
CCTCTAGCATCAAAGCTAAG+AGG | 0.452609 | 2.1:-3484856 | MS.gene47801:CDS |
GCCTTTGGTCTCATGTCAAT+AGG | 0.452696 | 2.1:-3486291 | MS.gene47801:CDS |
ATCAGCAACAACAGGTCAAA+TGG | 0.456751 | 2.1:-3486328 | MS.gene47801:CDS |
GGGAATGGCTGCAGGAAACT+TGG | 0.457181 | 2.1:-3484545 | MS.gene47801:CDS |
GGCTGTAAATCAGCAACAAC+AGG | 0.462810 | 2.1:-3486336 | MS.gene47801:CDS |
ATCAGTCCAAAGATAAGAAT+GGG | 0.469148 | 2.1:-3484820 | MS.gene47801:CDS |
GATCAGTCCAAAGATAAGAA+TGG | 0.470530 | 2.1:-3484821 | MS.gene47801:CDS |
GGTCTCATGTCAATAGGAAA+TGG | 0.473429 | 2.1:-3486285 | MS.gene47801:CDS |
AGCTAAGAGGGAAACCAGTT+AGG | 0.474106 | 2.1:-3484843 | MS.gene47801:CDS |
GTTGGATTGTTGCACGGAGG+CGG | 0.475474 | 2.1:+3486363 | None:intergenic |
TTATTCCAACTGATAAACTA+AGG | 0.476338 | 2.1:-3485876 | MS.gene47801:intron |
GAATGCACTATTTGATGATA+AGG | 0.477429 | 2.1:-3484275 | MS.gene47801:CDS |
TGAATTCAAGAATGGTGGTC+AGG | 0.484071 | 2.1:-3484215 | MS.gene47801:CDS |
GATAAAAGCATGAGTGCTGC+TGG | 0.484703 | 2.1:+3486075 | None:intergenic |
TAAATTTGAGGCGAGTGCTT+AGG | 0.485949 | 2.1:+3485931 | None:intergenic |
CCGTGCAACAATCCAACAAA+AGG | 0.491201 | 2.1:-3486357 | MS.gene47801:CDS |
AAGATAATCCCAATAACCAT+AGG | 0.503374 | 2.1:-3486215 | MS.gene47801:CDS |
CCTCTTAGCTTTGATGCTAG+AGG | 0.504379 | 2.1:+3484856 | None:intergenic |
AGGTACTATATGGTTATAGC+TGG | 0.504415 | 2.1:-3484427 | MS.gene47801:CDS |
TGTGGATTGGGAATGGCTGC+AGG | 0.507155 | 2.1:-3484553 | MS.gene47801:CDS |
ATATACCTTAGTTTATCAGT+TGG | 0.509029 | 2.1:+3485871 | None:intergenic |
AGAATATTTCCAAAACCCTA+TGG | 0.509252 | 2.1:+3486199 | None:intergenic |
GCACCTCAACTTTGTTTGGG+TGG | 0.515417 | 2.1:-3484664 | MS.gene47801:CDS |
ACTTCGAGAGGAGGAAAAGA+AGG | 0.517938 | 2.1:-3484487 | MS.gene47801:CDS |
AACCACAGGTGTGAAATTGC+TGG | 0.518211 | 2.1:+3487517 | None:intergenic |
TAATGAGGCACTTGCAAGGA+TGG | 0.518909 | 2.1:-3487639 | MS.gene47801:CDS |
ATGATGTCTCTTAACATTGG+TGG | 0.521670 | 2.1:-3485015 | MS.gene47801:CDS |
ATGGTTCAGCAATAAATCCT+TGG | 0.525938 | 2.1:-3485113 | MS.gene47801:CDS |
GTGATGAAACTAGTTCAAAT+GGG | 0.528060 | 2.1:-3484249 | MS.gene47801:CDS |
AACATGATATTGTATTTCAT+GGG | 0.529372 | 2.1:-3487596 | MS.gene47801:CDS |
AGCAATTTCACACCTGTGGT+TGG | 0.552734 | 2.1:-3487515 | MS.gene47801:CDS |
TGAAGAAAATGGATCAAATG+AGG | 0.555265 | 2.1:-3484170 | MS.gene47801:CDS |
CATGAAATACAATATCATGT+TGG | 0.556956 | 2.1:+3487598 | None:intergenic |
TTAACAAGGGTCGTTACGAC+AGG | 0.563343 | 2.1:-3484447 | MS.gene47801:CDS |
CTCTAGCATCAAAGCTAAGA+GGG | 0.563358 | 2.1:-3484855 | MS.gene47801:CDS |
AGCCATTCCCAATCCACAAA+GGG | 0.565762 | 2.1:+3484558 | None:intergenic |
TGCAAAACCAGTAATCAAGC+TGG | 0.568525 | 2.1:+3485999 | None:intergenic |
GAGTTAACTGAATTCAAGAA+TGG | 0.573785 | 2.1:-3484223 | MS.gene47801:CDS |
TCAACAACCTCAAAGACGCA+AGG | 0.577324 | 2.1:-3487924 | MS.gene47801:CDS |
TAATGGAATAACTCTAACAA+GGG | 0.581669 | 2.1:+3485053 | None:intergenic |
GATTTCTGATAATATTAACA+AGG | 0.582713 | 2.1:-3484461 | MS.gene47801:CDS |
ATATCCAAGATCATTGTGGT+TGG | 0.589125 | 2.1:-3486116 | MS.gene47801:CDS |
TCCTATTGACATGAGACCAA+AGG | 0.589402 | 2.1:+3486290 | None:intergenic |
ATCATGATGTCTCTTAACAT+TGG | 0.589519 | 2.1:-3485018 | MS.gene47801:CDS |
AGATAATCCCAATAACCATA+GGG | 0.590293 | 2.1:-3486214 | MS.gene47801:CDS |
ATTTGAGGCGAGTGCTTAGG+TGG | 0.590380 | 2.1:+3485934 | None:intergenic |
AGCCAGCAATTTCACACCTG+TGG | 0.593088 | 2.1:-3487519 | MS.gene47801:CDS |
TCTATTACAAAGAGTTTCCG+AGG | 0.594249 | 2.1:-3484603 | MS.gene47801:CDS |
TTGGTCTGCACCAAATGCAA+TGG | 0.596753 | 2.1:+3486248 | None:intergenic |
TCTACTGTGCAGAGTCTCCA+AGG | 0.601641 | 2.1:+3485096 | None:intergenic |
GAGTGACGAAAATGATTCAA+AGG | 0.604343 | 2.1:-3484326 | MS.gene47801:CDS |
TTATTCCATTATGGTCTACA+GGG | 0.605759 | 2.1:-3485041 | MS.gene47801:CDS |
TGTGAAATTGCTGGCTGCAG+AGG | 0.606290 | 2.1:+3487526 | None:intergenic |
ATAACACTAAAAGATCCTGC+TGG | 0.609060 | 2.1:+3484931 | None:intergenic |
TTAGATACTTGATCAACTGT+AGG | 0.609166 | 2.1:+3484352 | None:intergenic |
GAAATACTAGACATAGTCCT+CGG | 0.610354 | 2.1:+3484586 | None:intergenic |
ATTTATTGCTGAACCATCAG+CGG | 0.612577 | 2.1:+3485119 | None:intergenic |
ATAATGGAATAACTCTAACA+AGG | 0.613210 | 2.1:+3485052 | None:intergenic |
GATAACGGACCAATGATGAA+AGG | 0.614259 | 2.1:+3487884 | None:intergenic |
GAACAAGATATAGCCGCTGA+TGG | 0.616787 | 2.1:-3485132 | MS.gene47801:CDS |
GCAATGAAAGCACCAACCAC+AGG | 0.618105 | 2.1:+3487503 | None:intergenic |
TCAAACTTTGAAGTACCAGC+AGG | 0.619130 | 2.1:-3484946 | MS.gene47801:CDS |
CAGCCATTCCCAATCCACAA+AGG | 0.622878 | 2.1:+3484557 | None:intergenic |
CAACAACCTCAAAGACGCAA+GGG | 0.622892 | 2.1:-3487923 | MS.gene47801:CDS |
TTAACTGAATTCAAGAATGG+TGG | 0.626429 | 2.1:-3484220 | MS.gene47801:CDS |
TAGCTAATGAGGCACTTGCA+AGG | 0.628805 | 2.1:-3487643 | MS.gene47801:CDS |
ATAGAAAACGTTACTTCGAG+AGG | 0.629749 | 2.1:-3484499 | MS.gene47801:CDS |
CAGCCATGATTCCAGCAGCA+CGG | 0.630846 | 2.1:-3486386 | MS.gene47801:CDS |
TATAGGGAATGGGAATGTTG+TGG | 0.634364 | 2.1:-3486413 | MS.gene47801:intron |
CTCATGTCAATAGGAAATGG+TGG | 0.638976 | 2.1:-3486282 | MS.gene47801:CDS |
GAAAACGTTACTTCGAGAGG+AGG | 0.639167 | 2.1:-3484496 | MS.gene47801:CDS |
AAGCTGCTGCAGTTACCAAG+TGG | 0.640941 | 2.1:+3484773 | None:intergenic |
TGACGAAAATGATTCAAAGG+AGG | 0.645013 | 2.1:-3484323 | MS.gene47801:CDS |
TGTTGAAAATGTCTGCATTG+TGG | 0.646643 | 2.1:-3484690 | MS.gene47801:CDS |
CTTCGAGAGGAGGAAAAGAA+GGG | 0.647998 | 2.1:-3484486 | MS.gene47801:CDS |
CAACCTCAAAGACGCAAGGG+TGG | 0.648310 | 2.1:-3487920 | MS.gene47801:CDS |
ATTTCTGATAATATTAACAA+GGG | 0.662315 | 2.1:-3484460 | MS.gene47801:CDS |
CGAGAGGAGGAAAAGAAGGG+TGG | 0.662885 | 2.1:-3484483 | MS.gene47801:CDS |
GTATATATCCAAGATCATTG+TGG | 0.666389 | 2.1:-3486120 | MS.gene47801:CDS |
ATGAACCTAATCCAACACCT+AGG | 0.667940 | 2.1:+3487459 | None:intergenic |
ATACCACCCAAACAAAGTTG+AGG | 0.677525 | 2.1:+3484661 | None:intergenic |
CGGACCAATGATGAAAGGCA+TGG | 0.678009 | 2.1:+3487889 | None:intergenic |
TTTGTTGGATTGTTGCACGG+AGG | 0.691742 | 2.1:+3486360 | None:intergenic |
ACAATAATAAAACATGGACA+AGG | 0.715121 | 2.1:-3488002 | None:intergenic |
ATGCTAGAGGAATAAGAACG+CGG | 0.767450 | 2.1:+3484869 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAATAAGATTAAAATCTA+AGG | + | chr2.1:3486419-3486438 | None:intergenic | 10.0% |
!! | TAAATAAGATTAAAATCTAA+GGG | + | chr2.1:3486418-3486437 | None:intergenic | 10.0% |
!!! | TTGAGTAAATTATTATTTTT+AGG | - | chr2.1:3484864-3484883 | MS.gene47801:CDS | 10.0% |
!! | AAAAAGAAAGAATTACAAAA+AGG | - | chr2.1:3485078-3485097 | MS.gene47801:CDS | 15.0% |
!! | AAAAGAAAGAATTACAAAAA+GGG | - | chr2.1:3485079-3485098 | MS.gene47801:CDS | 15.0% |
!! | ATTTCTGATAATATTAACAA+GGG | - | chr2.1:3487679-3487698 | MS.gene47801:intron | 15.0% |
!!! | AGTAAATTATTATTTTTAGG+TGG | - | chr2.1:3484867-3484886 | MS.gene47801:CDS | 15.0% |
!!! | CAATTTTCAATCATAAAAAA+AGG | + | chr2.1:3485026-3485045 | None:intergenic | 15.0% |
!!! | CTTTTTTTATGATTGAAAAT+TGG | - | chr2.1:3485024-3485043 | MS.gene47801:CDS | 15.0% |
!!! | GAATTTTGTTGTATAATATA+TGG | - | chr2.1:3484462-3484481 | MS.gene47801:CDS | 15.0% |
!!! | GTAAATTATTATTTTTAGGT+GGG | - | chr2.1:3484868-3484887 | MS.gene47801:CDS | 15.0% |
!!! | TAAATTATTATTTTTAGGTG+GGG | - | chr2.1:3484869-3484888 | MS.gene47801:CDS | 15.0% |
!! | AAAAAGGTAGAATCATAAAA+AGG | - | chr2.1:3485332-3485351 | MS.gene47801:intron | 20.0% |
!! | AAAAGGTAGAATCATAAAAA+GGG | - | chr2.1:3485333-3485352 | MS.gene47801:intron | 20.0% |
!! | AAAGTTTCATAAAATTTGGT+AGG | - | chr2.1:3485357-3485376 | MS.gene47801:intron | 20.0% |
!! | AACATGATATTGTATTTCAT+GGG | - | chr2.1:3484543-3484562 | MS.gene47801:CDS | 20.0% |
!! | AACTTCATTAATCACAAATT+TGG | - | chr2.1:3486705-3486724 | MS.gene47801:intron | 20.0% |
!! | ACTTCATTAATCACAAATTT+GGG | - | chr2.1:3486706-3486725 | MS.gene47801:intron | 20.0% |
!! | ATATACAAAAGCTAAAATGA+TGG | + | chr2.1:3486306-3486325 | None:intergenic | 20.0% |
!! | ATCCAAAAAAAAATAAAGAG+AGG | + | chr2.1:3485187-3485206 | None:intergenic | 20.0% |
!! | ATGAAATACAATATCATGTT+GGG | + | chr2.1:3484543-3484562 | None:intergenic | 20.0% |
!! | CAAATTTAGATTGTTTAATG+CGG | + | chr2.1:3486888-3486907 | None:intergenic | 20.0% |
!! | GATTAATGAAGTTACATTAA+TGG | + | chr2.1:3486698-3486717 | None:intergenic | 20.0% |
!! | GATTTCTGATAATATTAACA+AGG | - | chr2.1:3487678-3487697 | MS.gene47801:intron | 20.0% |
!! | TATGATTAAATGCAATACAA+TGG | - | chr2.1:3485206-3485225 | MS.gene47801:intron | 20.0% |
!! | TTACTAGTTATACTTATACT+TGG | - | chr2.1:3484410-3484429 | MS.gene47801:CDS | 20.0% |
!! | TTCACATTAAAGAGAATATT+TGG | - | chr2.1:3484436-3484455 | MS.gene47801:CDS | 20.0% |
!!! | AAATTATTATTTTTAGGTGG+GGG | - | chr2.1:3484870-3484889 | MS.gene47801:CDS | 20.0% |
!!! | AATTCTTTCTTTTTCATACA+AGG | + | chr2.1:3485072-3485091 | None:intergenic | 20.0% |
!!! | ATTCTTTCTTTTTCATACAA+GGG | + | chr2.1:3485071-3485090 | None:intergenic | 20.0% |
!!! | CCTTTTTGTTTTTTGTTATA+GGG | - | chr2.1:3485710-3485729 | MS.gene47801:intron | 20.0% |
!!! | CTTAATTTTGAATCATAACA+AGG | + | chr2.1:3485281-3485300 | None:intergenic | 20.0% |
!!! | CTTTGTAATAGAATTCATTT+TGG | + | chr2.1:3487528-3487547 | None:intergenic | 20.0% |
!!! | TTATTGGCTAACATTAATTT+CGG | - | chr2.1:3486506-3486525 | MS.gene47801:intron | 20.0% |
!!! | TTTTGTATATTCTGTATATG+TGG | - | chr2.1:3486316-3486335 | MS.gene47801:CDS | 20.0% |
! | AAAATGCTAGATATCAAGAA+TGG | - | chr2.1:3486351-3486370 | MS.gene47801:CDS | 25.0% |
! | AAAGTTCCATAAAATTTGGT+AGG | - | chr2.1:3485620-3485639 | MS.gene47801:intron | 25.0% |
! | ATATAACTACCAAGATTTGA+TGG | + | chr2.1:3485113-3485132 | None:intergenic | 25.0% |
! | ATATACCTTAGTTTATCAGT+TGG | + | chr2.1:3486271-3486290 | None:intergenic | 25.0% |
! | ATCAAAAACTCAATAAAGAG+AGG | + | chr2.1:3485450-3485469 | None:intergenic | 25.0% |
! | CAAAGATAAGAAAAACACAA+TGG | + | chr2.1:3484766-3484785 | None:intergenic | 25.0% |
! | CAACATGATATTGTATTTCA+TGG | - | chr2.1:3484542-3484561 | MS.gene47801:CDS | 25.0% |
! | CATGAAATACAATATCATGT+TGG | + | chr2.1:3484544-3484563 | None:intergenic | 25.0% |
! | CATTAATGGTTAATGAGTAT+CGG | + | chr2.1:3486684-3486703 | None:intergenic | 25.0% |
! | CCCTATAACAAAAAACAAAA+AGG | + | chr2.1:3485713-3485732 | None:intergenic | 25.0% |
! | CGCATTAAACAATCTAAATT+TGG | - | chr2.1:3486886-3486905 | MS.gene47801:intron | 25.0% |
! | GATAAAATTCCATCAAATCT+TGG | - | chr2.1:3485101-3485120 | MS.gene47801:CDS | 25.0% |
! | GGAAAAAGTTCCATAAAATT+TGG | - | chr2.1:3485616-3485635 | MS.gene47801:intron | 25.0% |
! | GGGAAAAGTTTCATAAAATT+TGG | - | chr2.1:3485353-3485372 | MS.gene47801:intron | 25.0% |
! | TAATGGAATAACTCTAACAA+GGG | + | chr2.1:3487089-3487108 | None:intergenic | 25.0% |
! | TATGATTAACTGCAATACAA+TGG | - | chr2.1:3485469-3485488 | MS.gene47801:intron | 25.0% |
! | TCAAATTTACCATCACAAAA+AGG | - | chr2.1:3486222-3486241 | MS.gene47801:CDS | 25.0% |
! | TCTCATAACAGCATTAATTT+CGG | + | chr2.1:3485411-3485430 | None:intergenic | 25.0% |
! | TGGTAGGTTCAATATTTATA+TGG | - | chr2.1:3487233-3487252 | MS.gene47801:intron | 25.0% |
! | TTATTCCAACTGATAAACTA+AGG | - | chr2.1:3486263-3486282 | MS.gene47801:CDS | 25.0% |
! | TTGTTAGAGTTATTCCATTA+TGG | - | chr2.1:3487089-3487108 | MS.gene47801:intron | 25.0% |
! | TTTGTGGTTAATGATGTTAT+TGG | - | chr2.1:3486793-3486812 | MS.gene47801:intron | 25.0% |
!! | AATATGCCTACCAAATTTTA+TGG | + | chr2.1:3485366-3485385 | None:intergenic | 25.0% |
!! | AGCTAATTCTTTTCATTTTC+AGG | - | chr2.1:3486951-3486970 | MS.gene47801:intron | 25.0% |
!! | ATAATGGAATAACTCTAACA+AGG | + | chr2.1:3487090-3487109 | None:intergenic | 25.0% |
!! | CATTGTGTTTTTCTTATCTT+TGG | - | chr2.1:3484764-3484783 | MS.gene47801:CDS | 25.0% |
!! | CTTGATTTTGAATCATAACA+AGG | + | chr2.1:3485544-3485563 | None:intergenic | 25.0% |
!! | GATTATCTTTTCTATTCACT+TGG | + | chr2.1:3485913-3485932 | None:intergenic | 25.0% |
!! | GTTTTTAAATTTTCTCCACT+TGG | - | chr2.1:3487351-3487370 | MS.gene47801:intron | 25.0% |
!! | TATTGGCTAACATTAATTTC+GGG | - | chr2.1:3486507-3486526 | MS.gene47801:intron | 25.0% |
!! | TGTATATGTGGATTAAATCA+GGG | - | chr2.1:3486328-3486347 | MS.gene47801:CDS | 25.0% |
!! | TTTTATTGTTGTAGCTAATG+AGG | - | chr2.1:3484485-3484504 | MS.gene47801:CDS | 25.0% |
!! | TTTTTGTGATGGTAAATTTG+AGG | + | chr2.1:3486223-3486242 | None:intergenic | 25.0% |
!!! | ATTCTACCTTTTTCATACAA+GGG | + | chr2.1:3485325-3485344 | None:intergenic | 25.0% |
!!! | GCCTTTTTGTTTTTTGTTAT+AGG | - | chr2.1:3485709-3485728 | MS.gene47801:intron | 25.0% |
!!! | GTATTTTTTAGTTTGCAGTT+GGG | - | chr2.1:3487756-3487775 | MS.gene47801:intron | 25.0% |
!!! | TGCCTCTCTTTATTTTTTTT+TGG | - | chr2.1:3485182-3485201 | MS.gene47801:intron | 25.0% |
!!! | TGTATTTTTTAGTTTGCAGT+TGG | - | chr2.1:3487755-3487774 | MS.gene47801:intron | 25.0% |
!!! | TGTTTTTTGTTATAGGGAAT+GGG | - | chr2.1:3485716-3485735 | MS.gene47801:intron | 25.0% |
!!! | TTGTTTTTTGTTATAGGGAA+TGG | - | chr2.1:3485715-3485734 | MS.gene47801:intron | 25.0% |
!!! | TTTTGGAAATATTCTTCAGT+TGG | - | chr2.1:3485948-3485967 | MS.gene47801:CDS | 25.0% |
AAGATAATCCCAATAACCAT+AGG | - | chr2.1:3485924-3485943 | MS.gene47801:CDS | 30.0% | |
AAGGAGAAAAAAAGCAATTC+AGG | - | chr2.1:3487399-3487418 | MS.gene47801:intron | 30.0% | |
AATGAATATCTAGACATACC+AGG | + | chr2.1:3484716-3484735 | None:intergenic | 30.0% | |
AATGCTGTTATGAGAAAAGT+TGG | - | chr2.1:3485416-3485435 | MS.gene47801:intron | 30.0% | |
ACAGACAGATAGATAGATAA+CGG | + | chr2.1:3484273-3484292 | None:intergenic | 30.0% | |
AGAAAAAAAGCAATTCAGGA+AGG | - | chr2.1:3487403-3487422 | MS.gene47801:intron | 30.0% | |
AGAATATTTCCAAAACCCTA+TGG | + | chr2.1:3485943-3485962 | None:intergenic | 30.0% | |
AGATAATCCCAATAACCATA+GGG | - | chr2.1:3485925-3485944 | MS.gene47801:CDS | 30.0% | |
AGTGATGAAACTAGTTCAAA+TGG | - | chr2.1:3487889-3487908 | MS.gene47801:intron | 30.0% | |
ATCAGTCCAAAGATAAGAAT+GGG | - | chr2.1:3487319-3487338 | MS.gene47801:intron | 30.0% | |
ATCATGATGTCTCTTAACAT+TGG | - | chr2.1:3487121-3487140 | MS.gene47801:intron | 30.0% | |
ATTCAGTTCAATTGTTTCCT+AGG | - | chr2.1:3484808-3484827 | MS.gene47801:CDS | 30.0% | |
CAAAGATAAGAATGGGAATT+GGG | - | chr2.1:3487326-3487345 | MS.gene47801:intron | 30.0% | |
GAGTTAACTGAATTCAAGAA+TGG | - | chr2.1:3487916-3487935 | MS.gene47801:CDS | 30.0% | |
GTAAGAAAGAAACAAAGTAG+AGG | + | chr2.1:3484742-3484761 | None:intergenic | 30.0% | |
GTATATATCCAAGATCATTG+TGG | - | chr2.1:3486019-3486038 | MS.gene47801:CDS | 30.0% | |
GTCAAGATTAGTGAAGAAAA+TGG | - | chr2.1:3487958-3487977 | MS.gene47801:CDS | 30.0% | |
GTGATGAAACTAGTTCAAAT+GGG | - | chr2.1:3487890-3487909 | MS.gene47801:intron | 30.0% | |
TAAAACAACGATAACCACTT+AGG | + | chr2.1:3486630-3486649 | None:intergenic | 30.0% | |
TACAGTTGATCAAGTATCTA+AGG | - | chr2.1:3487789-3487808 | MS.gene47801:intron | 30.0% | |
TAGATTCCCTTGTATGAAAA+AGG | - | chr2.1:3485316-3485335 | MS.gene47801:intron | 30.0% | |
TGAAGAAAATGGATCAAATG+AGG | - | chr2.1:3487969-3487988 | MS.gene47801:CDS | 30.0% | |
TGATGAATTCAAGAATGACA+TGG | - | chr2.1:3486381-3486400 | MS.gene47801:CDS | 30.0% | |
TTAACTGAATTCAAGAATGG+TGG | - | chr2.1:3487919-3487938 | MS.gene47801:CDS | 30.0% | |
TTAGATACTTGATCAACTGT+AGG | + | chr2.1:3487790-3487809 | None:intergenic | 30.0% | |
TTATTCCATTATGGTCTACA+GGG | - | chr2.1:3487098-3487117 | MS.gene47801:intron | 30.0% | |
TTCATTGCAGATTCTTATCT+GGG | - | chr2.1:3484651-3484670 | MS.gene47801:CDS | 30.0% | |
TTGAAAATTGGATGTTGAGA+TGG | - | chr2.1:3485036-3485055 | MS.gene47801:CDS | 30.0% | |
TTTCATTGCAGATTCTTATC+TGG | - | chr2.1:3484650-3484669 | MS.gene47801:CDS | 30.0% | |
TTTGTGATCTTGACATAAAG+AGG | + | chr2.1:3486115-3486134 | None:intergenic | 30.0% | |
! | AGGATCTTTTAGTGTTATCA+TGG | - | chr2.1:3487213-3487232 | MS.gene47801:intron | 30.0% |
! | ATTTGAACCTCTAAAAACTG+CGG | + | chr2.1:3486741-3486760 | None:intergenic | 30.0% |
! | CTGTATATGTGGATTAAATC+AGG | - | chr2.1:3486327-3486346 | MS.gene47801:CDS | 30.0% |
! | GAACAAAGCTTGTGTTATTA+AGG | - | chr2.1:3486979-3486998 | MS.gene47801:intron | 30.0% |
! | GAATGCACTATTTGATGATA+AGG | - | chr2.1:3487864-3487883 | MS.gene47801:intron | 30.0% |
! | GTTAATGGATATACCAAGTT+CGG | + | chr2.1:3486832-3486851 | None:intergenic | 30.0% |
! | TCTTTTAGTGTTATCATGGT+AGG | - | chr2.1:3487217-3487236 | MS.gene47801:intron | 30.0% |
! | TTTTGTCACAATAACCTAAG+TGG | - | chr2.1:3486613-3486632 | MS.gene47801:intron | 30.0% |
!! | ATTGTTGAACAAAAGTACCT+AGG | + | chr2.1:3484828-3484847 | None:intergenic | 30.0% |
!! | GATTCTACCTTTTTCATACA+AGG | + | chr2.1:3485326-3485345 | None:intergenic | 30.0% |
!! | TTCTGTTGATGATGATGAAA+TGG | - | chr2.1:3484173-3484192 | MS.gene47801:CDS | 30.0% |
!! | TTGAGATTTTCTGAAAGAGA+AGG | - | chr2.1:3484898-3484917 | MS.gene47801:CDS | 30.0% |
!!! | GTGGTTATCGTTGTTTTAAT+AGG | - | chr2.1:3486632-3486651 | MS.gene47801:intron | 30.0% |
AAAAGAACCAGCTTGATTAC+TGG | - | chr2.1:3486133-3486152 | MS.gene47801:CDS | 35.0% | |
ACCACAAATTTAGACGTATC+AGG | + | chr2.1:3486781-3486800 | None:intergenic | 35.0% | |
AGGTACTATATGGTTATAGC+TGG | - | chr2.1:3487712-3487731 | MS.gene47801:intron | 35.0% | |
ATAACACTAAAAGATCCTGC+TGG | + | chr2.1:3487211-3487230 | None:intergenic | 35.0% | |
ATAGAAAACGTTACTTCGAG+AGG | - | chr2.1:3487640-3487659 | MS.gene47801:CDS | 35.0% | |
ATATCCAAGATCATTGTGGT+TGG | - | chr2.1:3486023-3486042 | MS.gene47801:CDS | 35.0% | |
ATGATGTCTCTTAACATTGG+TGG | - | chr2.1:3487124-3487143 | MS.gene47801:intron | 35.0% | |
ATGGTTCAGCAATAAATCCT+TGG | - | chr2.1:3487026-3487045 | MS.gene47801:intron | 35.0% | |
ATTTATTGCTGAACCATCAG+CGG | + | chr2.1:3487023-3487042 | None:intergenic | 35.0% | |
CCAAAGATAAGAATGGGAAT+TGG | - | chr2.1:3487325-3487344 | MS.gene47801:intron | 35.0% | |
CCAATTCCCATTCTTATCTT+TGG | + | chr2.1:3487328-3487347 | None:intergenic | 35.0% | |
CCACAAATTTAGACGTATCA+GGG | + | chr2.1:3486780-3486799 | None:intergenic | 35.0% | |
CTTTCATGTTCCATTGCATT+TGG | - | chr2.1:3485881-3485900 | MS.gene47801:CDS | 35.0% | |
GAAATACTAGACATAGTCCT+CGG | + | chr2.1:3487556-3487575 | None:intergenic | 35.0% | |
GAGTGACGAAAATGATTCAA+AGG | - | chr2.1:3487813-3487832 | MS.gene47801:intron | 35.0% | |
GATCAGTCCAAAGATAAGAA+TGG | - | chr2.1:3487318-3487337 | MS.gene47801:intron | 35.0% | |
GATCATTGTGGTTGGAAAAT+TGG | - | chr2.1:3486031-3486050 | MS.gene47801:CDS | 35.0% | |
GTGGTTAATGATGTTATTGG+TGG | - | chr2.1:3486796-3486815 | MS.gene47801:intron | 35.0% | |
GTTATTCCATTATGGTCTAC+AGG | - | chr2.1:3487097-3487116 | MS.gene47801:intron | 35.0% | |
TACGCTCAATAGATGGTTAA+TGG | + | chr2.1:3486847-3486866 | None:intergenic | 35.0% | |
TCCAAAACCCTATGGTTATT+GGG | + | chr2.1:3485935-3485954 | None:intergenic | 35.0% | |
TCTATTACAAAGAGTTTCCG+AGG | - | chr2.1:3487536-3487555 | MS.gene47801:CDS | 35.0% | |
TGACGAAAATGATTCAAAGG+AGG | - | chr2.1:3487816-3487835 | MS.gene47801:intron | 35.0% | |
TGAGGTGATATGTCTGTTTA+AGG | + | chr2.1:3487176-3487195 | None:intergenic | 35.0% | |
TGTATTTCATGGGAAGTTAC+AGG | - | chr2.1:3484553-3484572 | MS.gene47801:CDS | 35.0% | |
TGTTGAAAATGTCTGCATTG+TGG | - | chr2.1:3487449-3487468 | MS.gene47801:CDS | 35.0% | |
TTCCAAAACCCTATGGTTAT+TGG | + | chr2.1:3485936-3485955 | None:intergenic | 35.0% | |
! | CTTAACATTGGTGGATCATT+TGG | - | chr2.1:3487133-3487152 | MS.gene47801:intron | 35.0% |
! | TGTGGTTGGAAAATTGGTTT+CGG | - | chr2.1:3486037-3486056 | MS.gene47801:CDS | 35.0% |
! | TTTTCCAACCACAATGATCT+TGG | + | chr2.1:3486030-3486049 | None:intergenic | 35.0% |
!! | TGATTTACCGCAGTTTTTAG+AGG | - | chr2.1:3486731-3486750 | MS.gene47801:intron | 35.0% |
!! | TGTTGAGAGATGTTTTGTTG+AGG | + | chr2.1:3484201-3484220 | None:intergenic | 35.0% |
AGGTTCATTTGTCAGTTTCC+TGG | - | chr2.1:3484695-3484714 | MS.gene47801:CDS | 40.0% | |
ATACCACCCAAACAAAGTTG+AGG | + | chr2.1:3487481-3487500 | None:intergenic | 40.0% | |
ATCACCATGCCTTTCATCAT+TGG | - | chr2.1:3484246-3484265 | MS.gene47801:CDS | 40.0% | |
ATCAGCAACAACAGGTCAAA+TGG | - | chr2.1:3485811-3485830 | MS.gene47801:intron | 40.0% | |
ATCTTTGGACTGATCCTAAC+TGG | + | chr2.1:3487313-3487332 | None:intergenic | 40.0% | |
ATGAACCTAATCCAACACCT+AGG | + | chr2.1:3484683-3484702 | None:intergenic | 40.0% | |
ATGATCCCTGTAGACCATAA+TGG | + | chr2.1:3487106-3487125 | None:intergenic | 40.0% | |
ATGCTAGAGGAATAAGAACG+CGG | + | chr2.1:3487273-3487292 | None:intergenic | 40.0% | |
CCCTGATACGTCTAAATTTG+TGG | - | chr2.1:3486777-3486796 | MS.gene47801:intron | 40.0% | |
CGTCAATTACGCTCAATAGA+TGG | + | chr2.1:3486854-3486873 | None:intergenic | 40.0% | |
CTCATGTCAATAGGAAATGG+TGG | - | chr2.1:3485857-3485876 | MS.gene47801:intron | 40.0% | |
CTCTAGCATCAAAGCTAAGA+GGG | - | chr2.1:3487284-3487303 | MS.gene47801:intron | 40.0% | |
GAGAAGAATCTGAGTAGCTT+TGG | + | chr2.1:3484589-3484608 | None:intergenic | 40.0% | |
GGTCTCATGTCAATAGGAAA+TGG | - | chr2.1:3485854-3485873 | MS.gene47801:intron | 40.0% | |
TAGCCAATAAAATCTCAGCC+TGG | + | chr2.1:3486496-3486515 | None:intergenic | 40.0% | |
TATAGGGAATGGGAATGTTG+TGG | - | chr2.1:3485726-3485745 | MS.gene47801:intron | 40.0% | |
TCCTATTGACATGAGACCAA+AGG | + | chr2.1:3485852-3485871 | None:intergenic | 40.0% | |
TCGTTACGACAGGTACTATA+TGG | - | chr2.1:3487702-3487721 | MS.gene47801:intron | 40.0% | |
TGAATTCAAGAATGGTGGTC+AGG | - | chr2.1:3487924-3487943 | MS.gene47801:CDS | 40.0% | |
TGCAAAACCAGTAATCAAGC+TGG | + | chr2.1:3486143-3486162 | None:intergenic | 40.0% | |
TGCTGGTACTTCAAAGTTTG+AGG | + | chr2.1:3487194-3487213 | None:intergenic | 40.0% | |
! | AGCGAAGCATTCAATGCTAT+TGG | - | chr2.1:3487502-3487521 | MS.gene47801:CDS | 40.0% |
! | AGTATTTCTGCTTCCCTTTG+TGG | - | chr2.1:3487568-3487587 | MS.gene47801:CDS | 40.0% |
! | CCTTTTGTTGGATTGTTGCA+CGG | + | chr2.1:3485785-3485804 | None:intergenic | 40.0% |
! | CTTGCACCTCAACTTTGTTT+GGG | - | chr2.1:3487472-3487491 | MS.gene47801:CDS | 40.0% |
! | GATCTGAGTCCTTTTTGTGA+TGG | + | chr2.1:3486234-3486253 | None:intergenic | 40.0% |
! | TAAATTTGAGGCGAGTGCTT+AGG | + | chr2.1:3486211-3486230 | None:intergenic | 40.0% |
! | TCCCAATAACCATAGGGTTT+TGG | - | chr2.1:3485931-3485950 | MS.gene47801:CDS | 40.0% |
!! | CAGCAGCTTTTGAGAGTATA+AGG | - | chr2.1:3487380-3487399 | MS.gene47801:intron | 40.0% |
!! | GATAACGGACCAATGATGAA+AGG | + | chr2.1:3484258-3484277 | None:intergenic | 40.0% |
!! | GCTGATTTACAGCCTTTTGT+TGG | + | chr2.1:3485797-3485816 | None:intergenic | 40.0% |
!! | TCAAACTTTGAAGTACCAGC+AGG | - | chr2.1:3487193-3487212 | MS.gene47801:intron | 40.0% |
!! | TTAGTTTGCAGTTGGGCTTA+TGG | - | chr2.1:3487763-3487782 | MS.gene47801:intron | 40.0% |
!!! | ATTATTTTTAGGTGGGGGTG+AGG | - | chr2.1:3484875-3484894 | MS.gene47801:CDS | 40.0% |
AACCACAGGTGTGAAATTGC+TGG | + | chr2.1:3484625-3484644 | None:intergenic | 45.0% | |
ACTTCGAGAGGAGGAAAAGA+AGG | - | chr2.1:3487652-3487671 | MS.gene47801:intron | 45.0% | |
ACTTGCAAGGATGGCAAGTT+TGG | - | chr2.1:3484509-3484528 | MS.gene47801:CDS | 45.0% | |
AGCAATTTCACACCTGTGGT+TGG | - | chr2.1:3484624-3484643 | MS.gene47801:CDS | 45.0% | |
AGCCATTCCCAATCCACAAA+GGG | + | chr2.1:3487584-3487603 | None:intergenic | 45.0% | |
AGCTAAGAGGGAAACCAGTT+AGG | - | chr2.1:3487296-3487315 | MS.gene47801:intron | 45.0% | |
CAACAACCTCAAAGACGCAA+GGG | - | chr2.1:3484216-3484235 | MS.gene47801:CDS | 45.0% | |
CAATAAAATCTCAGCCTGGC+CGG | + | chr2.1:3486492-3486511 | None:intergenic | 45.0% | |
CCGTGCAACAATCCAACAAA+AGG | - | chr2.1:3485782-3485801 | MS.gene47801:intron | 45.0% | |
CCTCTAGCATCAAAGCTAAG+AGG | - | chr2.1:3487283-3487302 | MS.gene47801:intron | 45.0% | |
CTTCGAGAGGAGGAAAAGAA+GGG | - | chr2.1:3487653-3487672 | MS.gene47801:intron | 45.0% | |
CTTGCAAGGATGGCAAGTTT+GGG | - | chr2.1:3484510-3484529 | MS.gene47801:CDS | 45.0% | |
GAAAACGTTACTTCGAGAGG+AGG | - | chr2.1:3487643-3487662 | MS.gene47801:CDS | 45.0% | |
GAACAAGATATAGCCGCTGA+TGG | - | chr2.1:3487007-3487026 | MS.gene47801:intron | 45.0% | |
GCAATGTTACTCTCTGCCTT+TGG | - | chr2.1:3485833-3485852 | MS.gene47801:intron | 45.0% | |
GCCTTTGGTCTCATGTCAAT+AGG | - | chr2.1:3485848-3485867 | MS.gene47801:intron | 45.0% | |
GCTTGCACCTCAACTTTGTT+TGG | - | chr2.1:3487471-3487490 | MS.gene47801:CDS | 45.0% | |
GGCTGTAAATCAGCAACAAC+AGG | - | chr2.1:3485803-3485822 | MS.gene47801:intron | 45.0% | |
TCAACAACCTCAAAGACGCA+AGG | - | chr2.1:3484215-3484234 | MS.gene47801:CDS | 45.0% | |
TCTGCTTCCCTTTGTGGATT+GGG | - | chr2.1:3487574-3487593 | MS.gene47801:CDS | 45.0% | |
TCTTATCTGGGTCGTTTCCT+AGG | - | chr2.1:3484663-3484682 | MS.gene47801:CDS | 45.0% | |
TGGTTCATGAGTTCCGAACT+TGG | - | chr2.1:3486816-3486835 | MS.gene47801:intron | 45.0% | |
TTAACAAGGGTCGTTACGAC+AGG | - | chr2.1:3487692-3487711 | MS.gene47801:intron | 45.0% | |
TTCTGCTTCCCTTTGTGGAT+TGG | - | chr2.1:3487573-3487592 | MS.gene47801:CDS | 45.0% | |
TTGGTCTGCACCAAATGCAA+TGG | + | chr2.1:3485894-3485913 | None:intergenic | 45.0% | |
TTTGTTGGATTGTTGCACGG+AGG | + | chr2.1:3485782-3485801 | None:intergenic | 45.0% | |
! | GATAAAAGCATGAGTGCTGC+TGG | + | chr2.1:3486067-3486086 | None:intergenic | 45.0% |
! | TAATGAGGCACTTGCAAGGA+TGG | - | chr2.1:3484500-3484519 | MS.gene47801:CDS | 45.0% |
! | TAGCTAATGAGGCACTTGCA+AGG | - | chr2.1:3484496-3484515 | MS.gene47801:CDS | 45.0% |
!! | CCTCTTAGCTTTGATGCTAG+AGG | + | chr2.1:3487286-3487305 | None:intergenic | 45.0% |
!! | CGTTTCCTAGGTGTTGGATT+AGG | - | chr2.1:3484675-3484694 | MS.gene47801:CDS | 45.0% |
!! | TTCCCTTTGTGGATTGGGAA+TGG | - | chr2.1:3487579-3487598 | MS.gene47801:CDS | 45.0% |
AAGCTGCTGCAGTTACCAAG+TGG | + | chr2.1:3487369-3487388 | None:intergenic | 50.0% | |
AGCCAGCAATTTCACACCTG+TGG | - | chr2.1:3484620-3484639 | MS.gene47801:CDS | 50.0% | |
CAGAGAGATCGAGGATGACT+CGG | + | chr2.1:3484330-3484349 | None:intergenic | 50.0% | |
CAGCCATTCCCAATCCACAA+AGG | + | chr2.1:3487585-3487604 | None:intergenic | 50.0% | |
CGGACCAATGATGAAAGGCA+TGG | + | chr2.1:3484253-3484272 | None:intergenic | 50.0% | |
GCAGAGATGGAGGATGACTT+AGG | - | chr2.1:3484355-3484374 | MS.gene47801:CDS | 50.0% | |
TCTACTGTGCAGAGTCTCCA+AGG | + | chr2.1:3487046-3487065 | None:intergenic | 50.0% | |
TCTCTCTGACTCAGCAGAGA+TGG | - | chr2.1:3484342-3484361 | MS.gene47801:CDS | 50.0% | |
! | ATTTGAGGCGAGTGCTTAGG+TGG | + | chr2.1:3486208-3486227 | None:intergenic | 50.0% |
! | CGGCCAGGCTGAGATTTTAT+TGG | - | chr2.1:3486490-3486509 | MS.gene47801:intron | 50.0% |
! | GCACCTCAACTTTGTTTGGG+TGG | - | chr2.1:3487475-3487494 | MS.gene47801:CDS | 50.0% |
! | TGTGAAATTGCTGGCTGCAG+AGG | + | chr2.1:3484616-3484635 | None:intergenic | 50.0% |
!! | GCAATGAAAGCACCAACCAC+AGG | + | chr2.1:3484639-3484658 | None:intergenic | 50.0% |
ACCCACCACCCCATGATTTC+CGG | - | chr2.1:3486470-3486489 | MS.gene47801:intron | 55.0% | |
AGACCACCCTTGCGTCTTTG+AGG | + | chr2.1:3484225-3484244 | None:intergenic | 55.0% | |
CAACCTCAAAGACGCAAGGG+TGG | - | chr2.1:3484219-3484238 | MS.gene47801:CDS | 55.0% | |
CAGCCATGATTCCAGCAGCA+CGG | - | chr2.1:3485753-3485772 | MS.gene47801:intron | 55.0% | |
CGAGAGGAGGAAAAGAAGGG+TGG | - | chr2.1:3487656-3487675 | MS.gene47801:intron | 55.0% | |
CTCTGACTCAGCAGAGATGG+AGG | - | chr2.1:3484345-3484364 | MS.gene47801:CDS | 55.0% | |
CTGCTGAGTCAGAGAGATCG+AGG | + | chr2.1:3484339-3484358 | None:intergenic | 55.0% | |
CTGGGTCGTTTCCTAGGTGT+TGG | - | chr2.1:3484669-3484688 | MS.gene47801:CDS | 55.0% | |
GGGAATGGCTGCAGGAAACT+TGG | - | chr2.1:3487594-3487613 | MS.gene47801:CDS | 55.0% | |
GTTGGATTGTTGCACGGAGG+CGG | + | chr2.1:3485779-3485798 | None:intergenic | 55.0% | |
TCAGCCTGGCCGGAAATCAT+GGG | + | chr2.1:3486482-3486501 | None:intergenic | 55.0% | |
!! | TGTGGATTGGGAATGGCTGC+AGG | - | chr2.1:3487586-3487605 | MS.gene47801:CDS | 55.0% |
CAGCCTGGCCGGAAATCATG+GGG | + | chr2.1:3486481-3486500 | None:intergenic | 60.0% | |
CTCAGCCTGGCCGGAAATCA+TGG | + | chr2.1:3486483-3486502 | None:intergenic | 60.0% | |
GCCGGAAATCATGGGGTGGT+GGG | + | chr2.1:3486474-3486493 | None:intergenic | 60.0% | |
CCACCCCATGATTTCCGGCC+AGG | - | chr2.1:3486475-3486494 | MS.gene47801:intron | 65.0% | |
CCTGGCCGGAAATCATGGGG+TGG | + | chr2.1:3486478-3486497 | None:intergenic | 65.0% | |
GGCCGGAAATCATGGGGTGG+TGG | + | chr2.1:3486475-3486494 | None:intergenic | 65.0% | |
! | CGGCCGTGCTGCTGGAATCA+TGG | + | chr2.1:3485759-3485778 | None:intergenic | 65.0% |
! | CACGGAGGCGGCCGTGCTGC+TGG | + | chr2.1:3485767-3485786 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 3484150 | 3488011 | 3484150 | ID=MS.gene47801 |
chr2.1 | mRNA | 3484150 | 3488011 | 3484150 | ID=MS.gene47801.t1;Parent=MS.gene47801 |
chr2.1 | exon | 3487894 | 3488011 | 3487894 | ID=MS.gene47801.t1.exon1;Parent=MS.gene47801.t1 |
chr2.1 | CDS | 3487894 | 3488011 | 3487894 | ID=cds.MS.gene47801.t1;Parent=MS.gene47801.t1 |
chr2.1 | exon | 3487445 | 3487662 | 3487445 | ID=MS.gene47801.t1.exon2;Parent=MS.gene47801.t1 |
chr2.1 | CDS | 3487445 | 3487662 | 3487445 | ID=cds.MS.gene47801.t1;Parent=MS.gene47801.t1 |
chr2.1 | exon | 3485877 | 3486430 | 3485877 | ID=MS.gene47801.t1.exon3;Parent=MS.gene47801.t1 |
chr2.1 | CDS | 3485877 | 3486430 | 3485877 | ID=cds.MS.gene47801.t1;Parent=MS.gene47801.t1 |
chr2.1 | exon | 3484150 | 3485188 | 3484150 | ID=MS.gene47801.t1.exon4;Parent=MS.gene47801.t1 |
chr2.1 | CDS | 3484150 | 3485188 | 3484150 | ID=cds.MS.gene47801.t1;Parent=MS.gene47801.t1 |
Gene Sequence |
Protein sequence |