Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75915.t1 | XP_003603595.1 | 96.3 | 618 | 17 | 3 | 12 | 624 | 96 | 712 | 2.60E-297 | 1030.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75915.t1 | Q93YU8 | 28.9 | 436 | 286 | 8 | 183 | 602 | 351 | 778 | 4.0e-44 | 181.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75915.t1 | G7J2X7 | 96.3 | 618 | 17 | 3 | 12 | 624 | 96 | 712 | 1.9e-297 | 1030.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene75915 | 0.805889 | 1.07E-49 | -1.69E-46 |
| MS.gene050667 | MS.gene75915 | 0.824335 | 8.54E-54 | -1.69E-46 |
| MS.gene050874 | MS.gene75915 | 0.808357 | 3.22E-50 | -1.69E-46 |
| MS.gene050875 | MS.gene75915 | 0.835991 | 1.22E-56 | -1.69E-46 |
| MS.gene051025 | MS.gene75915 | 0.846447 | 2.16E-59 | -1.69E-46 |
| MS.gene05124 | MS.gene75915 | 0.80365 | 3.15E-49 | -1.69E-46 |
| MS.gene051896 | MS.gene75915 | 0.805363 | 1.38E-49 | -1.69E-46 |
| MS.gene051914 | MS.gene75915 | 0.866637 | 2.47E-65 | -1.69E-46 |
| MS.gene052169 | MS.gene75915 | 0.848726 | 5.10E-60 | -1.69E-46 |
| MS.gene052209 | MS.gene75915 | 0.815711 | 8.04E-52 | -1.69E-46 |
| MS.gene052308 | MS.gene75915 | 0.839575 | 1.46E-57 | -1.69E-46 |
| MS.gene052349 | MS.gene75915 | 0.803044 | 4.21E-49 | -1.69E-46 |
| MS.gene052367 | MS.gene75915 | 0.830226 | 3.31E-55 | -1.69E-46 |
| MS.gene053108 | MS.gene75915 | 0.804735 | 1.87E-49 | -1.69E-46 |
| MS.gene053173 | MS.gene75915 | 0.862938 | 3.55E-64 | -1.69E-46 |
| MS.gene053348 | MS.gene75915 | 0.829906 | 3.96E-55 | -1.69E-46 |
| MS.gene053416 | MS.gene75915 | 0.809194 | 2.13E-50 | -1.69E-46 |
| MS.gene053417 | MS.gene75915 | 0.805817 | 1.11E-49 | -1.69E-46 |
| MS.gene054018 | MS.gene75915 | 0.812673 | 3.77E-51 | -1.69E-46 |
| MS.gene054459 | MS.gene75915 | 0.847829 | 9.02E-60 | -1.69E-46 |
| MS.gene054551 | MS.gene75915 | 0.851833 | 6.86E-61 | -1.69E-46 |
| MS.gene054593 | MS.gene75915 | 0.82849 | 8.73E-55 | -1.69E-46 |
| MS.gene054633 | MS.gene75915 | 0.84185 | 3.70E-58 | -1.69E-46 |
| MS.gene054662 | MS.gene75915 | 0.905812 | 2.89E-80 | -1.69E-46 |
| MS.gene054851 | MS.gene75915 | 0.814285 | 1.67E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene75915 | 0.80146 | 8.91E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene75915 | 0.810423 | 1.16E-50 | -1.69E-46 |
| MS.gene055308 | MS.gene75915 | 0.828249 | 9.98E-55 | -1.69E-46 |
| MS.gene055578 | MS.gene75915 | 0.829622 | 4.64E-55 | -1.69E-46 |
| MS.gene055616 | MS.gene75915 | 0.808991 | 2.36E-50 | -1.69E-46 |
| MS.gene055982 | MS.gene75915 | 0.806163 | 9.40E-50 | -1.69E-46 |
| MS.gene056041 | MS.gene75915 | 0.822767 | 1.99E-53 | -1.69E-46 |
| MS.gene05640 | MS.gene75915 | 0.875765 | 2.38E-68 | -1.69E-46 |
| MS.gene056528 | MS.gene75915 | 0.805079 | 1.59E-49 | -1.69E-46 |
| MS.gene05652 | MS.gene75915 | 0.853206 | 2.79E-61 | -1.69E-46 |
| MS.gene056618 | MS.gene75915 | 0.814316 | 1.64E-51 | -1.69E-46 |
| MS.gene057101 | MS.gene75915 | 0.809036 | 2.31E-50 | -1.69E-46 |
| MS.gene05732 | MS.gene75915 | 0.828873 | 7.06E-55 | -1.69E-46 |
| MS.gene057367 | MS.gene75915 | 0.89136 | 4.27E-74 | -1.69E-46 |
| MS.gene057458 | MS.gene75915 | 0.828569 | 8.36E-55 | -1.69E-46 |
| MS.gene057669 | MS.gene75915 | 0.852684 | 3.93E-61 | -1.69E-46 |
| MS.gene057990 | MS.gene75915 | 0.803037 | 4.22E-49 | -1.69E-46 |
| MS.gene058128 | MS.gene75915 | 0.843895 | 1.06E-58 | -1.69E-46 |
| MS.gene058827 | MS.gene75915 | 0.80632 | 8.71E-50 | -1.69E-46 |
| MS.gene058849 | MS.gene75915 | 0.805971 | 1.03E-49 | -1.69E-46 |
| MS.gene058853 | MS.gene75915 | 0.840907 | 6.55E-58 | -1.69E-46 |
| MS.gene059553 | MS.gene75915 | 0.839583 | 1.45E-57 | -1.69E-46 |
| MS.gene05960 | MS.gene75915 | 0.800717 | 1.26E-48 | -1.69E-46 |
| MS.gene059616 | MS.gene75915 | 0.811891 | 5.58E-51 | -1.69E-46 |
| MS.gene060275 | MS.gene75915 | 0.83007 | 3.61E-55 | -1.69E-46 |
| MS.gene060291 | MS.gene75915 | 0.852999 | 3.19E-61 | -1.69E-46 |
| MS.gene060473 | MS.gene75915 | 0.807151 | 5.82E-50 | -1.69E-46 |
| MS.gene06093 | MS.gene75915 | 0.913067 | 9.45E-84 | -1.69E-46 |
| MS.gene061099 | MS.gene75915 | 0.80824 | 3.41E-50 | -1.69E-46 |
| MS.gene061260 | MS.gene75915 | 0.831015 | 2.12E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 145 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTATGGATATGGATAATA+TGG | 0.114095 | 3.3:+90025470 | MS.gene75915:CDS |
| GGGCTTGGATTGGTGGATTT+TGG | 0.116448 | 3.3:-90027552 | None:intergenic |
| GGCTTGGGATTATTTCTTTA+TGG | 0.126467 | 3.3:+90025455 | MS.gene75915:CDS |
| AAACTTGTTGCTCTTGTTAT+TGG | 0.151747 | 3.3:+90026682 | MS.gene75915:CDS |
| GCGCCATCTTCTCCTTCTTC+TGG | 0.159074 | 3.3:+90025387 | MS.gene75915:CDS |
| GGATTATTTCTTTATGGATA+TGG | 0.176860 | 3.3:+90025461 | MS.gene75915:CDS |
| CAAATTGTGACTCCCATTCT+TGG | 0.206075 | 3.3:-90027414 | None:intergenic |
| ATAACAAGAGCAACAAGTTT+TGG | 0.264787 | 3.3:-90026679 | None:intergenic |
| AGAAACACATGCCACTGTTT+TGG | 0.288622 | 3.3:+90026216 | MS.gene75915:CDS |
| GGTGAGAATGTTGATGTTAA+TGG | 0.289655 | 3.3:+90025549 | MS.gene75915:CDS |
| CCCTTCGTTGTAAATGCTTC+TGG | 0.304621 | 3.3:-90027762 | None:intergenic |
| CTCAACTTTCTCCGGTGTCT+TGG | 0.318035 | 3.3:-90025598 | None:intergenic |
| TTCTAATTTCGCTGATGGTC+GGG | 0.320744 | 3.3:+90025857 | MS.gene75915:CDS |
| ACAACTGAGAATCGCGAATA+TGG | 0.320972 | 3.3:-90026654 | None:intergenic |
| CGCCATCTTCTCCTTCTTCT+GGG | 0.323153 | 3.3:+90025388 | MS.gene75915:CDS |
| AACTTGTTGCTCTTGTTATT+GGG | 0.330220 | 3.3:+90026683 | MS.gene75915:CDS |
| GGAGGAAGAGATGAAGTTAA+AGG | 0.341872 | 3.3:+90027678 | MS.gene75915:CDS |
| TGAGGTTGATGTGTATAATA+AGG | 0.342260 | 3.3:+90025617 | MS.gene75915:CDS |
| ATAATCCCAAGCCATGTTCT+TGG | 0.359746 | 3.3:-90025445 | None:intergenic |
| TGAGTTTAGAAGAGCAATTA+AGG | 0.371298 | 3.3:+90025716 | MS.gene75915:CDS |
| AGAGAAGCCGGTGAGAAATT+AGG | 0.374879 | 3.3:-90025219 | None:intergenic |
| TCAACTTTCTCCGGTGTCTT+GGG | 0.378191 | 3.3:-90025597 | None:intergenic |
| GGCGGAAGAGGCGGTGGAGG+AGG | 0.380266 | 3.3:-90025198 | None:intergenic |
| GAACATATTCTCCCACATAT+TGG | 0.386881 | 3.3:-90027272 | None:intergenic |
| GATGCCGCCACCGCCTTTGC+CGG | 0.392756 | 3.3:+90025419 | MS.gene75915:CDS |
| GCAGATTTCGCTAGCTCGTC+AGG | 0.404088 | 3.3:-90027610 | None:intergenic |
| ACGACCGCACCGTGCAGCTT+TGG | 0.406384 | 3.3:+90027383 | MS.gene75915:CDS |
| TGATATTTCTCAAGATCATA+AGG | 0.409383 | 3.3:+90027342 | MS.gene75915:CDS |
| GAAGAGGCGGTGGAGGAGGG+AGG | 0.409543 | 3.3:-90025194 | None:intergenic |
| GAGAAATATCAAGAGATTTG+AGG | 0.419497 | 3.3:-90027330 | None:intergenic |
| GAGAACTAAGAATCTGCATA+AGG | 0.420407 | 3.3:-90025755 | None:intergenic |
| TGAGCTCTTCCGCGCGCTAT+CGG | 0.425047 | 3.3:+90027954 | MS.gene75915:CDS |
| CTAAGATGCTTGAAGCTACT+AGG | 0.436626 | 3.3:+90025823 | MS.gene75915:CDS |
| ATCATCTCTTTCTAGATCAT+CGG | 0.445892 | 3.3:-90027788 | None:intergenic |
| CAAGCCATGTTCTTGGAATC+CGG | 0.447999 | 3.3:-90025438 | None:intergenic |
| GGTACCATTCTTCAAAAGCT+TGG | 0.451334 | 3.3:-90027741 | None:intergenic |
| TTGTTGAAGAGGTGGAAGAA+GGG | 0.456126 | 3.3:+90025325 | MS.gene75915:CDS |
| ATTCTAATTTCGCTGATGGT+CGG | 0.456595 | 3.3:+90025856 | MS.gene75915:CDS |
| CTTTCAGGATGGCCAATATG+TGG | 0.463738 | 3.3:+90027260 | MS.gene75915:intron |
| GATAGCGCGCGGAAGAGCTC+AGG | 0.466453 | 3.3:-90027952 | None:intergenic |
| ACAAACTGCTTCTCCGAGAT+CGG | 0.469741 | 3.3:-90027826 | None:intergenic |
| AAGATCGGCGGTGGAATTAG+TGG | 0.472783 | 3.3:+90025291 | MS.gene75915:CDS |
| TCATCTCTTTCTAGATCATC+GGG | 0.475608 | 3.3:-90027787 | None:intergenic |
| CGGATTCCAAGAACATGGCT+TGG | 0.478452 | 3.3:+90025439 | MS.gene75915:CDS |
| TATCATTCTAATTTCGCTGA+TGG | 0.478716 | 3.3:+90025852 | MS.gene75915:CDS |
| CATTCAAGGGTGTATCCAAT+GGG | 0.479178 | 3.3:+90026158 | MS.gene75915:CDS |
| ACATCCAAGCTCTTTATAGC+TGG | 0.481961 | 3.3:+90027464 | MS.gene75915:CDS |
| TTGGAATCCGGCAAAGGCGG+TGG | 0.482836 | 3.3:-90025426 | None:intergenic |
| TAAAGAAGGGCTTGGATTGG+TGG | 0.484719 | 3.3:-90027559 | None:intergenic |
| GGATTCCAAGAACATGGCTT+GGG | 0.486447 | 3.3:+90025440 | MS.gene75915:CDS |
| GAAATGTGAGGAAACTAGAA+AGG | 0.486729 | 3.3:+90027702 | MS.gene75915:CDS |
| ATTGTTGAAGAGGTGGAAGA+AGG | 0.490175 | 3.3:+90025324 | MS.gene75915:CDS |
| GATGAGATTGAGAATGAAGA+AGG | 0.491897 | 3.3:+90025516 | MS.gene75915:CDS |
| ATTGCCCACGCTCAAGGTGG+TGG | 0.492952 | 3.3:+90028021 | MS.gene75915:CDS |
| TTTGGAATGTAATCCAAGAA+TGG | 0.494175 | 3.3:+90027401 | MS.gene75915:CDS |
| TTAGGCGGAAGAGGCGGTGG+AGG | 0.494227 | 3.3:-90025201 | None:intergenic |
| GAATCCGGCAAAGGCGGTGG+CGG | 0.494775 | 3.3:-90025423 | None:intergenic |
| ATTGCTCTTCTAAACTCAGC+AGG | 0.495940 | 3.3:-90025711 | None:intergenic |
| GGCGCCAGTGTTGAATCATT+AGG | 0.496446 | 3.3:+90026547 | MS.gene75915:CDS |
| TTGGAATGTAATCCAAGAAT+GGG | 0.497192 | 3.3:+90027402 | MS.gene75915:CDS |
| CAGTTACAGCACCGCAAGAT+CGG | 0.497409 | 3.3:+90025276 | MS.gene75915:CDS |
| GGGAAGAGGTTCTTTGAATG+AGG | 0.498151 | 3.3:+90025491 | MS.gene75915:CDS |
| TCTAATTTCGCTGATGGTCG+GGG | 0.499933 | 3.3:+90025858 | MS.gene75915:CDS |
| AGAACTAAGAATCTGCATAA+GGG | 0.500689 | 3.3:-90025754 | None:intergenic |
| AAATTAGGCGGAAGAGGCGG+TGG | 0.507309 | 3.3:-90025204 | None:intergenic |
| TGCAAGTGATAACATGGAAT+CGG | 0.508476 | 3.3:+90026134 | MS.gene75915:CDS |
| GCGGAAGAGGCGGTGGAGGA+GGG | 0.508892 | 3.3:-90025197 | None:intergenic |
| TTTATGGATATGGATAATAT+GGG | 0.509779 | 3.3:+90025471 | MS.gene75915:CDS |
| AATCATGCCATGCATAAAGA+AGG | 0.514400 | 3.3:-90027573 | None:intergenic |
| TCTTGTGTGTAAATGACTTA+CGG | 0.517302 | 3.3:-90026584 | None:intergenic |
| AAAGACGATCATACTTCAGC+AGG | 0.518195 | 3.3:+90027657 | MS.gene75915:CDS |
| CAGCACCGCAAGATCGGCGG+TGG | 0.518911 | 3.3:+90025282 | MS.gene75915:CDS |
| GGTGAGAAATTAGGCGGAAG+AGG | 0.523496 | 3.3:-90025210 | None:intergenic |
| TGAGCCAGCTATAAAGAGCT+TGG | 0.525015 | 3.3:-90027468 | None:intergenic |
| GAAGGAGAAGATGGCGCGTG+AGG | 0.530503 | 3.3:-90025381 | None:intergenic |
| ACATCAACCTCAACTTTCTC+CGG | 0.530753 | 3.3:-90025606 | None:intergenic |
| TCATTCAAGGGTGTATCCAA+TGG | 0.533090 | 3.3:+90026157 | MS.gene75915:CDS |
| TCCAAGCCCTTCTTTATGCA+TGG | 0.533581 | 3.3:+90027566 | MS.gene75915:CDS |
| CTCCCAGAAGAAGGAGAAGA+TGG | 0.534623 | 3.3:-90025390 | None:intergenic |
| AAGTCGATTGCCCACGCTCA+AGG | 0.535916 | 3.3:+90028015 | MS.gene75915:CDS |
| AACATGGAATCGGTCATTCA+AGG | 0.539680 | 3.3:+90026144 | MS.gene75915:CDS |
| GGTGTATCCAATGGGGAGGG+TGG | 0.541152 | 3.3:+90026166 | MS.gene75915:CDS |
| GCCATGCATAAAGAAGGGCT+TGG | 0.543280 | 3.3:-90027567 | None:intergenic |
| CTTTATCACTGCAGAAAATG+AGG | 0.543457 | 3.3:-90027638 | None:intergenic |
| ATCACTTTACTCCCAGAAGA+AGG | 0.544452 | 3.3:-90025399 | None:intergenic |
| GATATGGATAATATGGGAAG+AGG | 0.547615 | 3.3:+90025477 | MS.gene75915:CDS |
| GGCGGTGGAATTAGTGGTGG+AGG | 0.549912 | 3.3:+90025297 | MS.gene75915:CDS |
| CCAGAAGCATTTACAACGAA+GGG | 0.551600 | 3.3:+90027762 | MS.gene75915:CDS |
| ACAGAGCGTTTGAGAGAAGC+CGG | 0.551771 | 3.3:-90025231 | None:intergenic |
| TTTGGACAAGTTGTTAGCAT+GGG | 0.555933 | 3.3:+90026234 | MS.gene75915:CDS |
| GCATAAAGAAGGGCTTGGAT+TGG | 0.556125 | 3.3:-90027562 | None:intergenic |
| AAGAGGCGGTGGAGGAGGGA+GGG | 0.557539 | 3.3:-90025193 | None:intergenic |
| TAATTCCACCGCCGATCTTG+CGG | 0.558644 | 3.3:-90025287 | None:intergenic |
| TGCTGTAACTGCAACGACAC+AGG | 0.563887 | 3.3:-90025264 | None:intergenic |
| AAATACAAACAATCCGATCT+CGG | 0.564703 | 3.3:+90027813 | MS.gene75915:CDS |
| ACATGGAATCGGTCATTCAA+GGG | 0.566506 | 3.3:+90026145 | MS.gene75915:CDS |
| TTCTTGGAATCCGGCAAAGG+CGG | 0.566851 | 3.3:-90025429 | None:intergenic |
| TTTCAGGATGGCCAATATGT+GGG | 0.579247 | 3.3:+90027261 | MS.gene75915:intron |
| AATGAAGAAGGTGAAATTGA+AGG | 0.580423 | 3.3:+90025528 | MS.gene75915:CDS |
| TATTGTTGATATGCAGTCGA+TGG | 0.581443 | 3.3:+90026609 | MS.gene75915:CDS |
| GAAGAGGTGGAAGAAGGGAA+AGG | 0.581945 | 3.3:+90025330 | MS.gene75915:CDS |
| GGGAAAGGCGGTGATGCTGA+TGG | 0.584993 | 3.3:+90025345 | MS.gene75915:CDS |
| TGGAGGTGACATTGTTGAAG+AGG | 0.585814 | 3.3:+90025314 | MS.gene75915:CDS |
| GAAACTCTATGAAGAAGTCA+AGG | 0.586792 | 3.3:+90026261 | MS.gene75915:CDS |
| CGCACCACCACCTTGAGCGT+GGG | 0.587071 | 3.3:-90028025 | None:intergenic |
| GAGGTGGAAGAAGGGAAAGG+CGG | 0.588013 | 3.3:+90025333 | MS.gene75915:CDS |
| CCGCACCACCACCTTGAGCG+TGG | 0.589202 | 3.3:-90028026 | None:intergenic |
| GAGTCATGCAAGTGATAACA+TGG | 0.593246 | 3.3:+90026128 | MS.gene75915:CDS |
| CAGAAGCATTTACAACGAAG+GGG | 0.593582 | 3.3:+90027763 | MS.gene75915:CDS |
| AGGTGACATTGTTGAAGAGG+TGG | 0.593877 | 3.3:+90025317 | MS.gene75915:CDS |
| GGTGCGGTCGTAATGATGCT+TGG | 0.594455 | 3.3:-90027371 | None:intergenic |
| GGACTCAACAGTTTCTGAAG+TGG | 0.596338 | 3.3:+90026630 | MS.gene75915:CDS |
| CCACGCTCAAGGTGGTGGTG+CGG | 0.602808 | 3.3:+90028026 | MS.gene75915:CDS |
| ATGTTCTTGGAATCCGGCAA+AGG | 0.605757 | 3.3:-90025432 | None:intergenic |
| TCTTCCGCCTAATTTCTCAC+CGG | 0.608905 | 3.3:+90025212 | MS.gene75915:CDS |
| ATCATGCCATGCATAAAGAA+GGG | 0.611365 | 3.3:-90027572 | None:intergenic |
| GAAGTTAAAGGAGAAATGTG+AGG | 0.611782 | 3.3:+90027690 | MS.gene75915:CDS |
| AAACTAGAAAGGAATTCTTG+AGG | 0.618185 | 3.3:+90027713 | MS.gene75915:CDS |
| CAAGGGTGTATCCAATGGGG+AGG | 0.622313 | 3.3:+90026162 | MS.gene75915:CDS |
| ATCTGCATAAGGGTAACAGA+AGG | 0.622988 | 3.3:-90025744 | None:intergenic |
| ACCAGAAGCATTTACAACGA+AGG | 0.625698 | 3.3:+90027761 | MS.gene75915:CDS |
| CTGAACAAGCAGAAGAAGCG+TGG | 0.626103 | 3.3:+90026526 | MS.gene75915:CDS |
| TTTGCCGGATTCCAAGAACA+TGG | 0.627689 | 3.3:+90025434 | MS.gene75915:CDS |
| GACGATCATACTTCAGCAGG+AGG | 0.629306 | 3.3:+90027660 | MS.gene75915:CDS |
| ATCGGCGGTGGAATTAGTGG+TGG | 0.630858 | 3.3:+90025294 | MS.gene75915:CDS |
| TGAGATTGAACCCAAGACAC+CGG | 0.633573 | 3.3:+90025587 | MS.gene75915:CDS |
| GGAGCATGAACATGTACATG+AGG | 0.635866 | 3.3:+90025638 | MS.gene75915:CDS |
| GATTACATTCCAAAGCTGCA+CGG | 0.636378 | 3.3:-90027392 | None:intergenic |
| CAAGACACCGGAGAAAGTTG+AGG | 0.641109 | 3.3:+90025599 | MS.gene75915:CDS |
| TGAGGATGATGTGATAAGAG+AGG | 0.648109 | 3.3:+90025656 | MS.gene75915:CDS |
| GAGAAATTAGGCGGAAGAGG+CGG | 0.650849 | 3.3:-90025207 | None:intergenic |
| TTACAGCACCGCAAGATCGG+CGG | 0.652795 | 3.3:+90025279 | MS.gene75915:CDS |
| GAGAATGTTGATGTTAATGG+AGG | 0.660500 | 3.3:+90025552 | MS.gene75915:CDS |
| TGATGTTAATGGAGGACATG+TGG | 0.660982 | 3.3:+90025560 | MS.gene75915:CDS |
| AAGGGTGTATCCAATGGGGA+GGG | 0.663838 | 3.3:+90026163 | MS.gene75915:CDS |
| TGTTAATGGAGGACATGTGG+AGG | 0.675457 | 3.3:+90025563 | MS.gene75915:CDS |
| CATTCCAAAGCTGCACGGTG+CGG | 0.678361 | 3.3:-90027387 | None:intergenic |
| GAAGCCGGTGAGAAATTAGG+CGG | 0.684519 | 3.3:-90025216 | None:intergenic |
| GTTTAGAAGAGCAATTAAGG+TGG | 0.690000 | 3.3:+90025719 | MS.gene75915:CDS |
| GAGTATAATCCGATAGCGCG+CGG | 0.690717 | 3.3:-90027963 | None:intergenic |
| TGTAACTGCAACGACACAGG+CGG | 0.699824 | 3.3:-90025261 | None:intergenic |
| AGAAGCATTTACAACGAAGG+GGG | 0.702303 | 3.3:+90027764 | MS.gene75915:CDS |
| TCGATTGCCCACGCTCAAGG+TGG | 0.713047 | 3.3:+90028018 | MS.gene75915:CDS |
| TAACAACTTGTCCAAAACAG+TGG | 0.715371 | 3.3:-90026227 | None:intergenic |
| ATTCAAGGGTGTATCCAATG+GGG | 0.730624 | 3.3:+90026159 | MS.gene75915:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTCTATAAAATTGTAAG+TGG | + | chr3.3:90026947-90026966 | MS.gene75915:intron | 15.0% |
| !! | TACAACATTAAAATAAACTT+CGG | - | chr3.3:90027060-90027079 | None:intergenic | 15.0% |
| !!! | CAATAAGTGAAATTTTAAAA+AGG | - | chr3.3:90026454-90026473 | None:intergenic | 15.0% |
| !! | ACTGAAGTTGAATAAAATAA+AGG | - | chr3.3:90025910-90025929 | None:intergenic | 20.0% |
| !! | TTTATGGATATGGATAATAT+GGG | + | chr3.3:90025471-90025490 | MS.gene75915:CDS | 20.0% |
| !!! | ACAACTAGAGTTTTAAAAAA+AGG | - | chr3.3:90026015-90026034 | None:intergenic | 20.0% |
| !!! | ATAATAAAATGCTTTTCGAT+TGG | - | chr3.3:90026979-90026998 | None:intergenic | 20.0% |
| !!! | GAAAGTATAAATGTCAAAAA+TGG | - | chr3.3:90026300-90026319 | None:intergenic | 20.0% |
| !!! | TAATAAAATGCTTTTCGATT+GGG | - | chr3.3:90026978-90026997 | None:intergenic | 20.0% |
| !!! | TAGAATATATTTTGCAACAT+CGG | - | chr3.3:90026935-90026954 | None:intergenic | 20.0% |
| ! | ATCATTAGGAAAAACTAAAG+CGG | + | chr3.3:90026561-90026580 | MS.gene75915:CDS | 25.0% |
| ! | CAAATATAGATTGAGAATCT+AGG | - | chr3.3:90027013-90027032 | None:intergenic | 25.0% |
| ! | CTTTATGGATATGGATAATA+TGG | + | chr3.3:90025470-90025489 | MS.gene75915:CDS | 25.0% |
| ! | TAAAATAAACTTCGGTATCT+AGG | - | chr3.3:90027052-90027071 | None:intergenic | 25.0% |
| ! | TGATATTTCTCAAGATCATA+AGG | + | chr3.3:90027342-90027361 | MS.gene75915:CDS | 25.0% |
| ! | TGATGCAAAAAATAGAAACT+TGG | - | chr3.3:90027194-90027213 | None:intergenic | 25.0% |
| !! | GGATTATTTCTTTATGGATA+TGG | + | chr3.3:90025461-90025480 | MS.gene75915:CDS | 25.0% |
| !!! | AGAGTTTTAAAAAAAGGTCT+AGG | - | chr3.3:90026009-90026028 | None:intergenic | 25.0% |
| !!! | TCTATTTTTTGCATCACAAA+TGG | + | chr3.3:90027198-90027217 | MS.gene75915:intron | 25.0% |
| !!! | TTTTCAATTTGTTCTGGTAT+TGG | + | chr3.3:90027126-90027145 | MS.gene75915:intron | 25.0% |
| AAACTAGAAAGGAATTCTTG+AGG | + | chr3.3:90027713-90027732 | MS.gene75915:CDS | 30.0% | |
| AAAGCTAACTAACAAGATGA+AGG | - | chr3.3:90026322-90026341 | None:intergenic | 30.0% | |
| AAATACAAACAATCCGATCT+CGG | + | chr3.3:90027813-90027832 | MS.gene75915:CDS | 30.0% | |
| AATGAAGAAGGTGAAATTGA+AGG | + | chr3.3:90025528-90025547 | MS.gene75915:CDS | 30.0% | |
| ACCAGAACAAATTGAAAACT+AGG | - | chr3.3:90027124-90027143 | None:intergenic | 30.0% | |
| AGAACTAAGAATCTGCATAA+GGG | - | chr3.3:90025757-90025776 | None:intergenic | 30.0% | |
| ATAGAAACTTGGTACTTGAT+TGG | - | chr3.3:90027183-90027202 | None:intergenic | 30.0% | |
| ATCATCTCTTTCTAGATCAT+CGG | - | chr3.3:90027791-90027810 | None:intergenic | 30.0% | |
| CAATTTGGATAATGACATCA+AGG | - | chr3.3:90025982-90026001 | None:intergenic | 30.0% | |
| CTAACATTCAAGACTAATTC+AGG | - | chr3.3:90026889-90026908 | None:intergenic | 30.0% | |
| CTAAGATATCAAATAAGCAC+AGG | - | chr3.3:90026751-90026770 | None:intergenic | 30.0% | |
| CTCTAGTTGTGTAAAGTTTA+AGG | + | chr3.3:90026025-90026044 | MS.gene75915:intron | 30.0% | |
| GAATCTACTTGATTTCTTTC+AGG | + | chr3.3:90027245-90027264 | MS.gene75915:intron | 30.0% | |
| GAGAAATATCAAGAGATTTG+AGG | - | chr3.3:90027333-90027352 | None:intergenic | 30.0% | |
| GTGCTTATTTGATATCTTAG+TGG | + | chr3.3:90026751-90026770 | MS.gene75915:intron | 30.0% | |
| TATCATTCTAATTTCGCTGA+TGG | + | chr3.3:90025852-90025871 | MS.gene75915:CDS | 30.0% | |
| TCAAGTAGATTCATGAATCA+TGG | - | chr3.3:90027237-90027256 | None:intergenic | 30.0% | |
| TCTTGTGTGTAAATGACTTA+CGG | - | chr3.3:90026587-90026606 | None:intergenic | 30.0% | |
| TGAGTTTAGAAGAGCAATTA+AGG | + | chr3.3:90025716-90025735 | MS.gene75915:CDS | 30.0% | |
| TGATGTCATTATCCAAATTG+CGG | + | chr3.3:90025982-90026001 | MS.gene75915:intron | 30.0% | |
| TGTAAAGTGACACGATTATT+AGG | - | chr3.3:90027091-90027110 | None:intergenic | 30.0% | |
| TTGGAATGTAATCCAAGAAT+GGG | + | chr3.3:90027402-90027421 | MS.gene75915:CDS | 30.0% | |
| ! | ATAACAAGAGCAACAAGTTT+TGG | - | chr3.3:90026682-90026701 | None:intergenic | 30.0% |
| ! | TTGGTGTGTTAGCAAAATTT+TGG | - | chr3.3:90027164-90027183 | None:intergenic | 30.0% |
| ! | TTGGTTAAAGGAAGTTTTCA+AGG | - | chr3.3:90026836-90026855 | None:intergenic | 30.0% |
| ! | TTTGGAATGTAATCCAAGAA+TGG | + | chr3.3:90027401-90027420 | MS.gene75915:CDS | 30.0% |
| ! | TTTTCCTAATGATTCAACAC+TGG | - | chr3.3:90026554-90026573 | None:intergenic | 30.0% |
| !! | AAAACCAAGCTTTTGAAGAA+TGG | + | chr3.3:90027737-90027756 | MS.gene75915:CDS | 30.0% |
| !! | AAACTTGTTGCTCTTGTTAT+TGG | + | chr3.3:90026682-90026701 | MS.gene75915:CDS | 30.0% |
| !! | AACTTGTTGCTCTTGTTATT+GGG | + | chr3.3:90026683-90026702 | MS.gene75915:CDS | 30.0% |
| !! | TAACTTGTTGCTCTTAATGA+GGG | + | chr3.3:90026424-90026443 | MS.gene75915:intron | 30.0% |
| !! | TCCTAGTTTTCAATTTGTTC+TGG | + | chr3.3:90027120-90027139 | MS.gene75915:intron | 30.0% |
| !! | TGAGGTTGATGTGTATAATA+AGG | + | chr3.3:90025617-90025636 | MS.gene75915:CDS | 30.0% |
| !!! | GAGACGAGATTTTTTCTTTT+AGG | - | chr3.3:90027522-90027541 | None:intergenic | 30.0% |
| !!! | GTTTAAGGTTTTTAGTTAGC+TGG | + | chr3.3:90026040-90026059 | MS.gene75915:intron | 30.0% |
| AATCATGCCATGCATAAAGA+AGG | - | chr3.3:90027576-90027595 | None:intergenic | 35.0% | |
| ATCATGCCATGCATAAAGAA+GGG | - | chr3.3:90027575-90027594 | None:intergenic | 35.0% | |
| ATTCTAATTTCGCTGATGGT+CGG | + | chr3.3:90025856-90025875 | MS.gene75915:CDS | 35.0% | |
| CTACTTGATTTCTTTCAGGA+TGG | + | chr3.3:90027249-90027268 | MS.gene75915:intron | 35.0% | |
| CTTTATCACTGCAGAAAATG+AGG | - | chr3.3:90027641-90027660 | None:intergenic | 35.0% | |
| GAAACTCTATGAAGAAGTCA+AGG | + | chr3.3:90026261-90026280 | MS.gene75915:CDS | 35.0% | |
| GAAATGTGAGGAAACTAGAA+AGG | + | chr3.3:90027702-90027721 | MS.gene75915:CDS | 35.0% | |
| GAACATATTCTCCCACATAT+TGG | - | chr3.3:90027275-90027294 | None:intergenic | 35.0% | |
| GAAGTTAAAGGAGAAATGTG+AGG | + | chr3.3:90027690-90027709 | MS.gene75915:CDS | 35.0% | |
| GAGAACTAAGAATCTGCATA+AGG | - | chr3.3:90025758-90025777 | None:intergenic | 35.0% | |
| GAGAATGTTGATGTTAATGG+AGG | + | chr3.3:90025552-90025571 | MS.gene75915:CDS | 35.0% | |
| GATATGGATAATATGGGAAG+AGG | + | chr3.3:90025477-90025496 | MS.gene75915:CDS | 35.0% | |
| GATGAGATTGAGAATGAAGA+AGG | + | chr3.3:90025516-90025535 | MS.gene75915:CDS | 35.0% | |
| GGTGAGAATGTTGATGTTAA+TGG | + | chr3.3:90025549-90025568 | MS.gene75915:CDS | 35.0% | |
| GTCCTAAATTTCATGCTTGT+TGG | + | chr3.3:90026863-90026882 | MS.gene75915:intron | 35.0% | |
| GTTTAGAAGAGCAATTAAGG+TGG | + | chr3.3:90025719-90025738 | MS.gene75915:CDS | 35.0% | |
| TAACAACTTGTCCAAAACAG+TGG | - | chr3.3:90026230-90026249 | None:intergenic | 35.0% | |
| TATTGTTGATATGCAGTCGA+TGG | + | chr3.3:90026609-90026628 | MS.gene75915:CDS | 35.0% | |
| TCATCTCTTTCTAGATCATC+GGG | - | chr3.3:90027790-90027809 | None:intergenic | 35.0% | |
| TGCAAGTGATAACATGGAAT+CGG | + | chr3.3:90026134-90026153 | MS.gene75915:CDS | 35.0% | |
| TTTGGACAAGTTGTTAGCAT+GGG | + | chr3.3:90026234-90026253 | MS.gene75915:CDS | 35.0% | |
| ! | ATATCTCTTTGACTTCCCAT+TGG | - | chr3.3:90026718-90026737 | None:intergenic | 35.0% |
| ! | ATTGGGTAAGTATTGCCAAT+GGG | + | chr3.3:90026700-90026719 | MS.gene75915:intron | 35.0% |
| ! | GAAATTTAGGACGTTGTCAT+TGG | - | chr3.3:90026855-90026874 | None:intergenic | 35.0% |
| ! | GGCTTGGGATTATTTCTTTA+TGG | + | chr3.3:90025455-90025474 | MS.gene75915:CDS | 35.0% |
| ! | TATTGGGTAAGTATTGCCAA+TGG | + | chr3.3:90026699-90026718 | MS.gene75915:intron | 35.0% |
| ! | TGATTTGCAATGACATTAGC+AGG | + | chr3.3:90026085-90026104 | MS.gene75915:intron | 35.0% |
| ! | TTTTGGACAAGTTGTTAGCA+TGG | + | chr3.3:90026233-90026252 | MS.gene75915:CDS | 35.0% |
| !! | GTAACTTGTTGCTCTTAATG+AGG | + | chr3.3:90026423-90026442 | MS.gene75915:intron | 35.0% |
| !! | GTTTTCAAGGAAGTTCACAA+CGG | - | chr3.3:90026823-90026842 | None:intergenic | 35.0% |
| !!! | GTGACCAAAGTTTTAAATCG+CGG | + | chr3.3:90025944-90025963 | MS.gene75915:intron | 35.0% |
| !!! | TCTTTTAGGTTGCTTTCGAT+GGG | - | chr3.3:90027508-90027527 | None:intergenic | 35.0% |
| !!! | TGACCAAAGTTTTAAATCGC+GGG | + | chr3.3:90025945-90025964 | MS.gene75915:intron | 35.0% |
| !!! | TTCTTTTAGGTTGCTTTCGA+TGG | - | chr3.3:90027509-90027528 | None:intergenic | 35.0% |
| AAAGACGATCATACTTCAGC+AGG | + | chr3.3:90027657-90027676 | MS.gene75915:CDS | 40.0% | |
| AACATGGAATCGGTCATTCA+AGG | + | chr3.3:90026144-90026163 | MS.gene75915:CDS | 40.0% | |
| ACAACTGAGAATCGCGAATA+TGG | - | chr3.3:90026657-90026676 | None:intergenic | 40.0% | |
| ACATCAACCTCAACTTTCTC+CGG | - | chr3.3:90025609-90025628 | None:intergenic | 40.0% | |
| ACATCCAAGCTCTTTATAGC+TGG | + | chr3.3:90027464-90027483 | MS.gene75915:CDS | 40.0% | |
| ACATGGAATCGGTCATTCAA+GGG | + | chr3.3:90026145-90026164 | MS.gene75915:CDS | 40.0% | |
| ATAATCCCAAGCCATGTTCT+TGG | - | chr3.3:90025448-90025467 | None:intergenic | 40.0% | |
| ATCACTTTACTCCCAGAAGA+AGG | - | chr3.3:90025402-90025421 | None:intergenic | 40.0% | |
| ATCTGCATAAGGGTAACAGA+AGG | - | chr3.3:90025747-90025766 | None:intergenic | 40.0% | |
| ATTGCTCTTCTAAACTCAGC+AGG | - | chr3.3:90025714-90025733 | None:intergenic | 40.0% | |
| ATTGTTGAAGAGGTGGAAGA+AGG | + | chr3.3:90025324-90025343 | MS.gene75915:CDS | 40.0% | |
| CAAATTGTGACTCCCATTCT+TGG | - | chr3.3:90027417-90027436 | None:intergenic | 40.0% | |
| CTAAGATGCTTGAAGCTACT+AGG | + | chr3.3:90025823-90025842 | MS.gene75915:CDS | 40.0% | |
| GAGTCATGCAAGTGATAACA+TGG | + | chr3.3:90026128-90026147 | MS.gene75915:CDS | 40.0% | |
| GATTACATTCCAAAGCTGCA+CGG | - | chr3.3:90027395-90027414 | None:intergenic | 40.0% | |
| GGAGGAAGAGATGAAGTTAA+AGG | + | chr3.3:90027678-90027697 | MS.gene75915:CDS | 40.0% | |
| GGCCAACAAGCATGAAATTT+AGG | - | chr3.3:90026868-90026887 | None:intergenic | 40.0% | |
| GGTACCATTCTTCAAAAGCT+TGG | - | chr3.3:90027744-90027763 | None:intergenic | 40.0% | |
| TAGAAAACACGACAGTACAG+TGG | - | chr3.3:90026372-90026391 | None:intergenic | 40.0% | |
| TGAGGATGATGTGATAAGAG+AGG | + | chr3.3:90025656-90025675 | MS.gene75915:CDS | 40.0% | |
| TGATGTTAATGGAGGACATG+TGG | + | chr3.3:90025560-90025579 | MS.gene75915:CDS | 40.0% | |
| TTAGCTGGAATTGACATGCA+AGG | + | chr3.3:90026055-90026074 | MS.gene75915:intron | 40.0% | |
| TTCACTTATTGTCGACAGCA+AGG | + | chr3.3:90026463-90026482 | MS.gene75915:intron | 40.0% | |
| TTCTAATTTCGCTGATGGTC+GGG | + | chr3.3:90025857-90025876 | MS.gene75915:CDS | 40.0% | |
| TTGTTGAAGAGGTGGAAGAA+GGG | + | chr3.3:90025325-90025344 | MS.gene75915:CDS | 40.0% | |
| TTTCAGGATGGCCAATATGT+GGG | + | chr3.3:90027261-90027280 | MS.gene75915:intron | 40.0% | |
| ! | AGAAACACATGCCACTGTTT+TGG | + | chr3.3:90026216-90026235 | MS.gene75915:CDS | 40.0% |
| ! | AGGACGTTGTCATTGGTTAA+AGG | - | chr3.3:90026848-90026867 | None:intergenic | 40.0% |
| ! | ATTCAAGGGTGTATCCAATG+GGG | + | chr3.3:90026159-90026178 | MS.gene75915:CDS | 40.0% |
| ! | CATTCAAGGGTGTATCCAAT+GGG | + | chr3.3:90026158-90026177 | MS.gene75915:CDS | 40.0% |
| ! | GGTCTGTAACTATTTTCAGC+TGG | - | chr3.3:90027312-90027331 | None:intergenic | 40.0% |
| ! | TCATTCAAGGGTGTATCCAA+TGG | + | chr3.3:90026157-90026176 | MS.gene75915:CDS | 40.0% |
| ! | TTGCAACATCGGTTACTACT+AGG | - | chr3.3:90026924-90026943 | None:intergenic | 40.0% |
| !! | ACCAGAAGCATTTACAACGA+AGG | + | chr3.3:90027761-90027780 | MS.gene75915:CDS | 40.0% |
| !! | AGAAGCATTTACAACGAAGG+GGG | + | chr3.3:90027764-90027783 | MS.gene75915:CDS | 40.0% |
| !! | CAGAAGCATTTACAACGAAG+GGG | + | chr3.3:90027763-90027782 | MS.gene75915:CDS | 40.0% |
| !! | CCAGAAGCATTTACAACGAA+GGG | + | chr3.3:90027762-90027781 | MS.gene75915:CDS | 40.0% |
| ACAAACTGCTTCTCCGAGAT+CGG | - | chr3.3:90027829-90027848 | None:intergenic | 45.0% | |
| AGAGAAGCCGGTGAGAAATT+AGG | - | chr3.3:90025222-90025241 | None:intergenic | 45.0% | |
| AGGTGACATTGTTGAAGAGG+TGG | + | chr3.3:90025317-90025336 | MS.gene75915:CDS | 45.0% | |
| ATCGGTTACTACTAGGATGC+TGG | - | chr3.3:90026917-90026936 | None:intergenic | 45.0% | |
| ATGTTCTTGGAATCCGGCAA+AGG | - | chr3.3:90025435-90025454 | None:intergenic | 45.0% | |
| CAAGCCATGTTCTTGGAATC+CGG | - | chr3.3:90025441-90025460 | None:intergenic | 45.0% | |
| CCCTTCGTTGTAAATGCTTC+TGG | - | chr3.3:90027765-90027784 | None:intergenic | 45.0% | |
| CTTTCAGGATGGCCAATATG+TGG | + | chr3.3:90027260-90027279 | MS.gene75915:intron | 45.0% | |
| GCATAAAGAAGGGCTTGGAT+TGG | - | chr3.3:90027565-90027584 | None:intergenic | 45.0% | |
| GGAATTGACATGCAAGGTTG+AGG | + | chr3.3:90026061-90026080 | MS.gene75915:intron | 45.0% | |
| GGAGCATGAACATGTACATG+AGG | + | chr3.3:90025638-90025657 | MS.gene75915:CDS | 45.0% | |
| GGATTCCAAGAACATGGCTT+GGG | + | chr3.3:90025440-90025459 | MS.gene75915:CDS | 45.0% | |
| GGGAAGAGGTTCTTTGAATG+AGG | + | chr3.3:90025491-90025510 | MS.gene75915:CDS | 45.0% | |
| TCAACTTTCTCCGGTGTCTT+GGG | - | chr3.3:90025600-90025619 | None:intergenic | 45.0% | |
| TCCAAGCCCTTCTTTATGCA+TGG | + | chr3.3:90027566-90027585 | MS.gene75915:CDS | 45.0% | |
| TCTAATTTCGCTGATGGTCG+GGG | + | chr3.3:90025858-90025877 | MS.gene75915:CDS | 45.0% | |
| TCTTCCGCCTAATTTCTCAC+CGG | + | chr3.3:90025212-90025231 | MS.gene75915:CDS | 45.0% | |
| TGAGATTGAACCCAAGACAC+CGG | + | chr3.3:90025587-90025606 | MS.gene75915:CDS | 45.0% | |
| TGAGCCAGCTATAAAGAGCT+TGG | - | chr3.3:90027471-90027490 | None:intergenic | 45.0% | |
| TGGAGGTGACATTGTTGAAG+AGG | + | chr3.3:90025314-90025333 | MS.gene75915:CDS | 45.0% | |
| TGTTAATGGAGGACATGTGG+AGG | + | chr3.3:90025563-90025582 | MS.gene75915:CDS | 45.0% | |
| TTTGCCGGATTCCAAGAACA+TGG | + | chr3.3:90025434-90025453 | MS.gene75915:CDS | 45.0% | |
| ! | AAAGGTCTAGGACCGCAATT+TGG | - | chr3.3:90025997-90026016 | None:intergenic | 45.0% |
| ! | GGACTCAACAGTTTCTGAAG+TGG | + | chr3.3:90026630-90026649 | MS.gene75915:CDS | 45.0% |
| ! | GTGCCCGCGATTTAAAACTT+TGG | - | chr3.3:90025951-90025970 | None:intergenic | 45.0% |
| ! | TAAAGAAGGGCTTGGATTGG+TGG | - | chr3.3:90027562-90027581 | None:intergenic | 45.0% |
| !!! | ATTGGTGGATTTTGGGCTCT+TGG | - | chr3.3:90027547-90027566 | None:intergenic | 45.0% |
| !!! | GGCTTGGATTGGTGGATTTT+GGG | - | chr3.3:90027554-90027573 | None:intergenic | 45.0% |
| AAGATCGGCGGTGGAATTAG+TGG | + | chr3.3:90025291-90025310 | MS.gene75915:CDS | 50.0% | |
| CAAGACACCGGAGAAAGTTG+AGG | + | chr3.3:90025599-90025618 | MS.gene75915:CDS | 50.0% | |
| CAGTTACAGCACCGCAAGAT+CGG | + | chr3.3:90025276-90025295 | MS.gene75915:CDS | 50.0% | |
| CGCCATCTTCTCCTTCTTCT+GGG | + | chr3.3:90025388-90025407 | MS.gene75915:CDS | 50.0% | |
| CGGATTCCAAGAACATGGCT+TGG | + | chr3.3:90025439-90025458 | MS.gene75915:CDS | 50.0% | |
| CTCAACTTTCTCCGGTGTCT+TGG | - | chr3.3:90025601-90025620 | None:intergenic | 50.0% | |
| CTCCCAGAAGAAGGAGAAGA+TGG | - | chr3.3:90025393-90025412 | None:intergenic | 50.0% | |
| CTGAACAAGCAGAAGAAGCG+TGG | + | chr3.3:90026526-90026545 | MS.gene75915:CDS | 50.0% | |
| GAAGAGGTGGAAGAAGGGAA+AGG | + | chr3.3:90025330-90025349 | MS.gene75915:CDS | 50.0% | |
| GAAGCCGGTGAGAAATTAGG+CGG | - | chr3.3:90025219-90025238 | None:intergenic | 50.0% | |
| GACGATCATACTTCAGCAGG+AGG | + | chr3.3:90027660-90027679 | MS.gene75915:CDS | 50.0% | |
| GAGAAATTAGGCGGAAGAGG+CGG | - | chr3.3:90025210-90025229 | None:intergenic | 50.0% | |
| GAGTATAATCCGATAGCGCG+CGG | - | chr3.3:90027966-90027985 | None:intergenic | 50.0% | |
| GCCATGCATAAAGAAGGGCT+TGG | - | chr3.3:90027570-90027589 | None:intergenic | 50.0% | |
| GGTGAGAAATTAGGCGGAAG+AGG | - | chr3.3:90025213-90025232 | None:intergenic | 50.0% | |
| TAATTCCACCGCCGATCTTG+CGG | - | chr3.3:90025290-90025309 | None:intergenic | 50.0% | |
| TGCTGTAACTGCAACGACAC+AGG | - | chr3.3:90025267-90025286 | None:intergenic | 50.0% | |
| TGTAACTGCAACGACACAGG+CGG | - | chr3.3:90025264-90025283 | None:intergenic | 50.0% | |
| TTCTTGGAATCCGGCAAAGG+CGG | - | chr3.3:90025432-90025451 | None:intergenic | 50.0% | |
| ! | AAGGGTGTATCCAATGGGGA+GGG | + | chr3.3:90026163-90026182 | MS.gene75915:CDS | 50.0% |
| ! | ACAGAGCGTTTGAGAGAAGC+CGG | - | chr3.3:90025234-90025253 | None:intergenic | 50.0% |
| ! | ATCTTTTCCACCCTCCCCAT+TGG | - | chr3.3:90026176-90026195 | None:intergenic | 50.0% |
| ! | GGCGCCAGTGTTGAATCATT+AGG | + | chr3.3:90026547-90026566 | MS.gene75915:CDS | 50.0% |
| !!! | GCAAGCGAGTTTTGAGACTC+TGG | - | chr3.3:90027933-90027952 | None:intergenic | 50.0% |
| !!! | GGGCTTGGATTGGTGGATTT+TGG | - | chr3.3:90027555-90027574 | None:intergenic | 50.0% |
| AAATTAGGCGGAAGAGGCGG+TGG | - | chr3.3:90025207-90025226 | None:intergenic | 55.0% | |
| AAGTCGATTGCCCACGCTCA+AGG | + | chr3.3:90028015-90028034 | MS.gene75915:CDS | 55.0% | |
| ATCGGCGGTGGAATTAGTGG+TGG | + | chr3.3:90025294-90025313 | MS.gene75915:CDS | 55.0% | |
| CATTCCAAAGCTGCACGGTG+CGG | - | chr3.3:90027390-90027409 | None:intergenic | 55.0% | |
| GAGGTGGAAGAAGGGAAAGG+CGG | + | chr3.3:90025333-90025352 | MS.gene75915:CDS | 55.0% | |
| GCAGATTTCGCTAGCTCGTC+AGG | - | chr3.3:90027613-90027632 | None:intergenic | 55.0% | |
| GCGCCATCTTCTCCTTCTTC+TGG | + | chr3.3:90025387-90025406 | MS.gene75915:CDS | 55.0% | |
| GGTGCGGTCGTAATGATGCT+TGG | - | chr3.3:90027374-90027393 | None:intergenic | 55.0% | |
| TTACAGCACCGCAAGATCGG+CGG | + | chr3.3:90025279-90025298 | MS.gene75915:CDS | 55.0% | |
| ! | CAAGGGTGTATCCAATGGGG+AGG | + | chr3.3:90026162-90026181 | MS.gene75915:CDS | 55.0% |
| !! | GGTGGATTTTGGGCTCTTGG+CGG | - | chr3.3:90027544-90027563 | None:intergenic | 55.0% |
| ATTGCCCACGCTCAAGGTGG+TGG | + | chr3.3:90028021-90028040 | MS.gene75915:CDS | 60.0% | |
| GAAGGAGAAGATGGCGCGTG+AGG | - | chr3.3:90025384-90025403 | None:intergenic | 60.0% | |
| GGCGGTGGAATTAGTGGTGG+AGG | + | chr3.3:90025297-90025316 | MS.gene75915:CDS | 60.0% | |
| GGGAAAGGCGGTGATGCTGA+TGG | + | chr3.3:90025345-90025364 | MS.gene75915:CDS | 60.0% | |
| GGTGTATCCAATGGGGAGGG+TGG | + | chr3.3:90026166-90026185 | MS.gene75915:CDS | 60.0% | |
| TCGATTGCCCACGCTCAAGG+TGG | + | chr3.3:90028018-90028037 | MS.gene75915:CDS | 60.0% | |
| TGAGCTCTTCCGCGCGCTAT+CGG | + | chr3.3:90027954-90027973 | MS.gene75915:CDS | 60.0% | |
| TTGGAATCCGGCAAAGGCGG+TGG | - | chr3.3:90025429-90025448 | None:intergenic | 60.0% | |
| AAGAGGCGGTGGAGGAGGGA+GGG | - | chr3.3:90025196-90025215 | None:intergenic | 65.0% | |
| ACGACCGCACCGTGCAGCTT+TGG | + | chr3.3:90027383-90027402 | MS.gene75915:CDS | 65.0% | |
| CGCACCACCACCTTGAGCGT+GGG | - | chr3.3:90028028-90028047 | None:intergenic | 65.0% | |
| GAATCCGGCAAAGGCGGTGG+CGG | - | chr3.3:90025426-90025445 | None:intergenic | 65.0% | |
| GATAGCGCGCGGAAGAGCTC+AGG | - | chr3.3:90027955-90027974 | None:intergenic | 65.0% | |
| TTAGGCGGAAGAGGCGGTGG+AGG | - | chr3.3:90025204-90025223 | None:intergenic | 65.0% | |
| ! | CCACGCTCAAGGTGGTGGTG+CGG | + | chr3.3:90028026-90028045 | MS.gene75915:CDS | 65.0% |
| CAGCACCGCAAGATCGGCGG+TGG | + | chr3.3:90025282-90025301 | MS.gene75915:CDS | 70.0% | |
| CCGCACCACCACCTTGAGCG+TGG | - | chr3.3:90028029-90028048 | None:intergenic | 70.0% | |
| GAAGAGGCGGTGGAGGAGGG+AGG | - | chr3.3:90025197-90025216 | None:intergenic | 70.0% | |
| GATGCCGCCACCGCCTTTGC+CGG | + | chr3.3:90025419-90025438 | MS.gene75915:CDS | 70.0% | |
| GCGGAAGAGGCGGTGGAGGA+GGG | - | chr3.3:90025200-90025219 | None:intergenic | 70.0% | |
| GGCGGAAGAGGCGGTGGAGG+AGG | - | chr3.3:90025201-90025220 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 90025190 | 90028053 | 90025190 | ID=MS.gene75915 |
| chr3.3 | mRNA | 90025190 | 90028053 | 90025190 | ID=MS.gene75915.t1;Parent=MS.gene75915 |
| chr3.3 | exon | 90025190 | 90025879 | 90025190 | ID=MS.gene75915.t1.exon1;Parent=MS.gene75915.t1 |
| chr3.3 | CDS | 90025190 | 90025879 | 90025190 | ID=cds.MS.gene75915.t1;Parent=MS.gene75915.t1 |
| chr3.3 | exon | 90026107 | 90026282 | 90026107 | ID=MS.gene75915.t1.exon2;Parent=MS.gene75915.t1 |
| chr3.3 | CDS | 90026107 | 90026282 | 90026107 | ID=cds.MS.gene75915.t1;Parent=MS.gene75915.t1 |
| chr3.3 | exon | 90026481 | 90026704 | 90026481 | ID=MS.gene75915.t1.exon3;Parent=MS.gene75915.t1 |
| chr3.3 | CDS | 90026481 | 90026704 | 90026481 | ID=cds.MS.gene75915.t1;Parent=MS.gene75915.t1 |
| chr3.3 | exon | 90027267 | 90028053 | 90027267 | ID=MS.gene75915.t1.exon4;Parent=MS.gene75915.t1 |
| chr3.3 | CDS | 90027267 | 90028053 | 90027267 | ID=cds.MS.gene75915.t1;Parent=MS.gene75915.t1 |
| Gene Sequence |
| Protein sequence |
