Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75639.t1 | XP_003601737.1 | 90.7 | 399 | 36 | 1 | 1 | 398 | 1 | 399 | 3.60E-191 | 677.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75639.t1 | P29344 | 30.0 | 190 | 115 | 3 | 93 | 282 | 164 | 335 | 1.4e-18 | 95.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75639.t1 | G7JBD3 | 90.7 | 399 | 36 | 1 | 1 | 398 | 1 | 399 | 2.6e-191 | 677.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene75639 | 0.873158 | 1.83E-67 | -1.69E-46 |
| MS.gene049173 | MS.gene75639 | 0.845441 | 4.05E-59 | -1.69E-46 |
| MS.gene049217 | MS.gene75639 | 0.840521 | 8.27E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene75639 | 0.911373 | 6.54E-83 | -1.69E-46 |
| MS.gene049232 | MS.gene75639 | 0.878756 | 2.17E-69 | -1.69E-46 |
| MS.gene049285 | MS.gene75639 | 0.917544 | 4.67E-86 | -1.69E-46 |
| MS.gene049320 | MS.gene75639 | 0.902818 | 6.57E-79 | -1.69E-46 |
| MS.gene04939 | MS.gene75639 | 0.803853 | 2.86E-49 | -1.69E-46 |
| MS.gene049600 | MS.gene75639 | 0.814438 | 1.54E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene75639 | 0.824104 | 9.67E-54 | -1.69E-46 |
| MS.gene049627 | MS.gene75639 | 0.876126 | 1.79E-68 | -1.69E-46 |
| MS.gene049633 | MS.gene75639 | 0.840248 | 9.75E-58 | -1.69E-46 |
| MS.gene049865 | MS.gene75639 | 0.810886 | 9.22E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene75639 | 0.879473 | 1.21E-69 | -1.69E-46 |
| MS.gene050163 | MS.gene75639 | 0.911378 | 6.51E-83 | -1.69E-46 |
| MS.gene050165 | MS.gene75639 | 0.920397 | 1.35E-87 | -1.69E-46 |
| MS.gene050170 | MS.gene75639 | 0.852866 | 3.48E-61 | -1.69E-46 |
| MS.gene050216 | MS.gene75639 | 0.804783 | 1.83E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene75639 | 0.862723 | 4.14E-64 | -1.69E-46 |
| MS.gene050333 | MS.gene75639 | 0.905812 | 2.89E-80 | -1.69E-46 |
| MS.gene050403 | MS.gene75639 | 0.808525 | 2.97E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene75639 | 0.819843 | 9.38E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene75639 | 0.852971 | 3.25E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene75639 | 0.911117 | 8.74E-83 | -1.69E-46 |
| MS.gene050518 | MS.gene75639 | 0.918697 | 1.13E-86 | -1.69E-46 |
| MS.gene050538 | MS.gene75639 | 0.808616 | 2.84E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene75639 | 0.894669 | 1.98E-75 | -1.69E-46 |
| MS.gene050612 | MS.gene75639 | 0.895546 | 8.65E-76 | -1.69E-46 |
| MS.gene050675 | MS.gene75639 | 0.865636 | 5.11E-65 | -1.69E-46 |
| MS.gene050699 | MS.gene75639 | 0.877683 | 5.16E-69 | -1.69E-46 |
| MS.gene050747 | MS.gene75639 | 0.861325 | 1.11E-63 | -1.69E-46 |
| MS.gene050772 | MS.gene75639 | 0.867219 | 1.61E-65 | -1.69E-46 |
| MS.gene05080 | MS.gene75639 | 0.827301 | 1.69E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene75639 | 0.859156 | 5.03E-63 | -1.69E-46 |
| MS.gene050871 | MS.gene75639 | 0.856232 | 3.70E-62 | -1.69E-46 |
| MS.gene050876 | MS.gene75639 | 0.906982 | 8.29E-81 | -1.69E-46 |
| MS.gene05087 | MS.gene75639 | 0.868533 | 6.08E-66 | -1.69E-46 |
| MS.gene050904 | MS.gene75639 | 0.908308 | 1.97E-81 | -1.69E-46 |
| MS.gene050950 | MS.gene75639 | 0.861253 | 1.17E-63 | -1.69E-46 |
| MS.gene050986 | MS.gene75639 | 0.900648 | 5.94E-78 | -1.69E-46 |
| MS.gene05100 | MS.gene75639 | 0.892947 | 9.91E-75 | -1.69E-46 |
| MS.gene051268 | MS.gene75639 | 0.82501 | 5.92E-54 | -1.69E-46 |
| MS.gene051317 | MS.gene75639 | 0.870493 | 1.40E-66 | -1.69E-46 |
| MS.gene051509 | MS.gene75639 | 0.802787 | 4.75E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene75639 | 0.876365 | 1.48E-68 | -1.69E-46 |
| MS.gene051666 | MS.gene75639 | 0.800879 | 1.17E-48 | -1.69E-46 |
| MS.gene051694 | MS.gene75639 | 0.806362 | 8.53E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene75639 | 0.844005 | 9.88E-59 | -1.69E-46 |
| MS.gene051858 | MS.gene75639 | 0.801924 | 7.16E-49 | -1.69E-46 |
| MS.gene051949 | MS.gene75639 | 0.861535 | 9.58E-64 | -1.69E-46 |
| MS.gene052164 | MS.gene75639 | 0.864831 | 9.16E-65 | -1.69E-46 |
| MS.gene052271 | MS.gene75639 | 0.817514 | 3.17E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene75639 | 0.89481 | 1.74E-75 | -1.69E-46 |
| MS.gene052486 | MS.gene75639 | 0.899097 | 2.78E-77 | -1.69E-46 |
| MS.gene052503 | MS.gene75639 | 0.82628 | 2.96E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene75639 | 0.812809 | 3.52E-51 | -1.69E-46 |
| MS.gene052670 | MS.gene75639 | 0.820479 | 6.71E-53 | -1.69E-46 |
| MS.gene052822 | MS.gene75639 | 0.811606 | 6.43E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene75639 | 0.821633 | 3.64E-53 | -1.69E-46 |
| MS.gene052825 | MS.gene75639 | 0.814632 | 1.40E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene75639 | 0.808458 | 3.07E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene75639 | 0.833152 | 6.28E-56 | -1.69E-46 |
| MS.gene052966 | MS.gene75639 | 0.858035 | 1.09E-62 | -1.69E-46 |
| MS.gene053117 | MS.gene75639 | 0.808064 | 3.72E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene75639 | 0.850805 | 1.34E-60 | -1.69E-46 |
| MS.gene053207 | MS.gene75639 | 0.809526 | 1.81E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene75639 | 0.88064 | 4.65E-70 | -1.69E-46 |
| MS.gene053286 | MS.gene75639 | 0.884533 | 1.77E-71 | -1.69E-46 |
| MS.gene053420 | MS.gene75639 | -0.809813 | 1.57E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene75639 | 0.834043 | 3.77E-56 | -1.69E-46 |
| MS.gene053479 | MS.gene75639 | 0.812926 | 3.32E-51 | -1.69E-46 |
| MS.gene053480 | MS.gene75639 | 0.828133 | 1.06E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene75639 | 0.861519 | 9.69E-64 | -1.69E-46 |
| MS.gene053626 | MS.gene75639 | 0.823457 | 1.37E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene75639 | 0.829816 | 4.17E-55 | -1.69E-46 |
| MS.gene053633 | MS.gene75639 | 0.813245 | 2.82E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene75639 | 0.849632 | 2.86E-60 | -1.69E-46 |
| MS.gene053916 | MS.gene75639 | 0.812931 | 3.31E-51 | -1.69E-46 |
| MS.gene054374 | MS.gene75639 | 0.802235 | 6.18E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene75639 | 0.857261 | 1.84E-62 | -1.69E-46 |
| MS.gene054595 | MS.gene75639 | 0.849817 | 2.54E-60 | -1.69E-46 |
| MS.gene054600 | MS.gene75639 | 0.873418 | 1.49E-67 | -1.69E-46 |
| MS.gene054638 | MS.gene75639 | 0.835701 | 1.44E-56 | -1.69E-46 |
| MS.gene054642 | MS.gene75639 | 0.88174 | 1.87E-70 | -1.69E-46 |
| MS.gene05470 | MS.gene75639 | 0.873508 | 1.39E-67 | -1.69E-46 |
| MS.gene054954 | MS.gene75639 | 0.912988 | 1.03E-83 | -1.69E-46 |
| MS.gene05505 | MS.gene75639 | 0.801851 | 7.41E-49 | -1.69E-46 |
| MS.gene055212 | MS.gene75639 | 0.816796 | 4.60E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene75639 | 0.823277 | 1.51E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene75639 | 0.900704 | 5.61E-78 | -1.69E-46 |
| MS.gene055502 | MS.gene75639 | 0.87993 | 8.33E-70 | -1.69E-46 |
| MS.gene055577 | MS.gene75639 | 0.865192 | 7.06E-65 | -1.69E-46 |
| MS.gene055634 | MS.gene75639 | 0.859618 | 3.65E-63 | -1.69E-46 |
| MS.gene055636 | MS.gene75639 | 0.802539 | 5.35E-49 | -1.69E-46 |
| MS.gene055638 | MS.gene75639 | 0.838815 | 2.30E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene75639 | 0.821202 | 4.58E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene75639 | 0.912343 | 2.17E-83 | -1.69E-46 |
| MS.gene055750 | MS.gene75639 | 0.924525 | 6.28E-90 | -1.69E-46 |
| MS.gene055751 | MS.gene75639 | 0.925252 | 2.36E-90 | -1.69E-46 |
| MS.gene055776 | MS.gene75639 | 0.881163 | 3.02E-70 | -1.69E-46 |
| MS.gene055849 | MS.gene75639 | 0.863922 | 1.76E-64 | -1.69E-46 |
| MS.gene05589 | MS.gene75639 | 0.875636 | 2.63E-68 | -1.69E-46 |
| MS.gene055941 | MS.gene75639 | 0.842932 | 1.91E-58 | -1.69E-46 |
| MS.gene056046 | MS.gene75639 | 0.813026 | 3.15E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene75639 | 0.84047 | 8.53E-58 | -1.69E-46 |
| MS.gene056409 | MS.gene75639 | 0.860068 | 2.67E-63 | -1.69E-46 |
| MS.gene056446 | MS.gene75639 | 0.808817 | 2.57E-50 | -1.69E-46 |
| MS.gene056449 | MS.gene75639 | 0.856183 | 3.82E-62 | -1.69E-46 |
| MS.gene056450 | MS.gene75639 | 0.872945 | 2.15E-67 | -1.69E-46 |
| MS.gene056504 | MS.gene75639 | 0.9078 | 3.42E-81 | -1.69E-46 |
| MS.gene056510 | MS.gene75639 | 0.890898 | 6.49E-74 | -1.69E-46 |
| MS.gene056549 | MS.gene75639 | 0.853471 | 2.34E-61 | -1.69E-46 |
| MS.gene056610 | MS.gene75639 | 0.828998 | 6.58E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene75639 | 0.913513 | 5.64E-84 | -1.69E-46 |
| MS.gene056692 | MS.gene75639 | 0.901877 | 1.72E-78 | -1.69E-46 |
| MS.gene056898 | MS.gene75639 | 0.831554 | 1.56E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene75639 | 0.801966 | 7.02E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene75639 | 0.829843 | 4.10E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene75639 | 0.830637 | 2.63E-55 | -1.69E-46 |
| MS.gene057831 | MS.gene75639 | 0.884596 | 1.68E-71 | -1.69E-46 |
| MS.gene057872 | MS.gene75639 | 0.811639 | 6.33E-51 | -1.69E-46 |
| MS.gene05787 | MS.gene75639 | 0.84807 | 7.74E-60 | -1.69E-46 |
| MS.gene057986 | MS.gene75639 | 0.81249 | 4.13E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene75639 | 0.804578 | 2.02E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene75639 | -0.820526 | 6.55E-53 | -1.69E-46 |
| MS.gene058335 | MS.gene75639 | 0.833929 | 4.02E-56 | -1.69E-46 |
| MS.gene058338 | MS.gene75639 | 0.819816 | 9.52E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene75639 | 0.844834 | 5.91E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene75639 | 0.887638 | 1.20E-72 | -1.69E-46 |
| MS.gene058544 | MS.gene75639 | 0.846284 | 2.39E-59 | -1.69E-46 |
| MS.gene058719 | MS.gene75639 | 0.881087 | 3.21E-70 | -1.69E-46 |
| MS.gene058723 | MS.gene75639 | 0.829861 | 4.06E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene75639 | 0.890538 | 9.00E-74 | -1.69E-46 |
| MS.gene058838 | MS.gene75639 | 0.834101 | 3.64E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene75639 | 0.90151 | 2.49E-78 | -1.69E-46 |
| MS.gene059023 | MS.gene75639 | 0.872416 | 3.24E-67 | -1.69E-46 |
| MS.gene059029 | MS.gene75639 | 0.809168 | 2.16E-50 | -1.69E-46 |
| MS.gene059079 | MS.gene75639 | 0.851121 | 1.09E-60 | -1.69E-46 |
| MS.gene05912 | MS.gene75639 | 0.866057 | 3.77E-65 | -1.69E-46 |
| MS.gene05913 | MS.gene75639 | 0.828355 | 9.42E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene75639 | 0.830832 | 2.35E-55 | -1.69E-46 |
| MS.gene059367 | MS.gene75639 | 0.826436 | 2.72E-54 | -1.69E-46 |
| MS.gene059479 | MS.gene75639 | -0.804384 | 2.22E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene75639 | 0.82077 | 5.75E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene75639 | 0.906736 | 1.08E-80 | -1.69E-46 |
| MS.gene059718 | MS.gene75639 | 0.882828 | 7.51E-71 | -1.69E-46 |
| MS.gene059756 | MS.gene75639 | 0.855191 | 7.44E-62 | -1.69E-46 |
| MS.gene059801 | MS.gene75639 | 0.870967 | 9.77E-67 | -1.69E-46 |
| MS.gene059837 | MS.gene75639 | 0.853145 | 2.90E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene75639 | 0.887823 | 1.02E-72 | -1.69E-46 |
| MS.gene06000 | MS.gene75639 | 0.857983 | 1.13E-62 | -1.69E-46 |
| MS.gene060595 | MS.gene75639 | -0.814107 | 1.82E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene75639 | 0.907299 | 5.89E-81 | -1.69E-46 |
| MS.gene060762 | MS.gene75639 | 0.903301 | 3.99E-79 | -1.69E-46 |
| MS.gene060778 | MS.gene75639 | 0.857351 | 1.73E-62 | -1.69E-46 |
| MS.gene06077 | MS.gene75639 | 0.918624 | 1.24E-86 | -1.69E-46 |
| MS.gene060823 | MS.gene75639 | -0.813819 | 2.11E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene75639 | 0.821837 | 3.26E-53 | -1.69E-46 |
| MS.gene06097 | MS.gene75639 | 0.807729 | 4.38E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene75639 | 0.888819 | 4.21E-73 | -1.69E-46 |
| MS.gene06105 | MS.gene75639 | 0.810051 | 1.40E-50 | -1.69E-46 |
| MS.gene061134 | MS.gene75639 | 0.810989 | 8.76E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene75639 | 0.872122 | 4.05E-67 | -1.69E-46 |
| MS.gene061171 | MS.gene75639 | 0.833077 | 6.56E-56 | -1.69E-46 |
| MS.gene061200 | MS.gene75639 | 0.822987 | 1.76E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75639 | MS.gene60270 | PPI |
| MS.gene75639 | MS.gene015974 | PPI |
| MS.gene75639 | MS.gene51553 | PPI |
| MS.gene32618 | MS.gene75639 | PPI |
| MS.gene75639 | MS.gene014821 | PPI |
| MS.gene75639 | MS.gene61685 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75639.t1 | MTR_3g084860 | 94.250 | 400 | 20 | 2 | 1 | 398 | 1 | 399 | 0.0 | 692 |
| MS.gene75639.t1 | MTR_2g033020 | 25.431 | 232 | 147 | 5 | 51 | 282 | 127 | 332 | 4.06e-17 | 82.8 |
| MS.gene75639.t1 | MTR_8g097290 | 22.703 | 370 | 197 | 10 | 101 | 397 | 534 | 887 | 5.03e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75639.t1 | AT3G23700 | 69.799 | 298 | 90 | 0 | 101 | 398 | 95 | 392 | 2.94e-147 | 423 |
| MS.gene75639.t1 | AT1G12800 | 28.175 | 252 | 161 | 7 | 154 | 397 | 527 | 766 | 1.48e-19 | 91.3 |
| MS.gene75639.t1 | AT5G30510 | 31.053 | 190 | 113 | 3 | 93 | 282 | 167 | 338 | 1.90e-19 | 90.1 |
Find 103 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTAACTTGCGAGGGCATTT+AGG | 0.208511 | 3.3:-70961015 | None:intergenic |
| TCAACTCTCTTGCAAGTTCT+TGG | 0.229040 | 3.3:-70962281 | None:intergenic |
| TCTCACAAGACTTGCAGCTT+TGG | 0.347827 | 3.3:+70965599 | MS.gene75639:CDS |
| CAGTCGCATCGATCCCTTAC+CGG | 0.359860 | 3.3:+70964010 | MS.gene75639:CDS |
| GTAACTTGCGAGGGCATTTA+GGG | 0.363821 | 3.3:-70961014 | None:intergenic |
| ATGCTGGAGGCCTGCTGGTT+CGG | 0.365464 | 3.3:+70961907 | MS.gene75639:CDS |
| AACCGACTCTTGCTTCAAAA+AGG | 0.402684 | 3.3:-70962780 | None:intergenic |
| TATCTGAAAAGGAAGCTTCA+TGG | 0.403011 | 3.3:+70962725 | MS.gene75639:CDS |
| GTCGGTTCTGTTGAGGACTA+TGG | 0.403821 | 3.3:+70962796 | MS.gene75639:CDS |
| GCAGGTCTTTATCACCTTAC+CGG | 0.410702 | 3.3:+70962932 | MS.gene75639:intron |
| ATGATGCTCTTCGTCAAGCC+AGG | 0.415476 | 3.3:+70961172 | MS.gene75639:CDS |
| TGACCAGGAAGGCATCAAAA+AGG | 0.417349 | 3.3:+70966032 | MS.gene75639:CDS |
| CATCGATCCCTTACCGGGGC+TGG | 0.418626 | 3.3:+70964016 | MS.gene75639:CDS |
| GAAGAGCTATTGCAGGAAGA+TGG | 0.434626 | 3.3:+70964050 | MS.gene75639:CDS |
| AGACGAGGAGAAACGGAAAT+TGG | 0.435020 | 3.3:+70962699 | MS.gene75639:CDS |
| CGATGCAAGAATCAGTCGTC+AGG | 0.443629 | 3.3:+70965558 | MS.gene75639:CDS |
| CGGGGCTCAGCTGTGAGAAC+GGG | 0.451469 | 3.3:-70961953 | None:intergenic |
| AGTAGTACTGCTGAAAGAAT+CGG | 0.451994 | 3.3:-70963985 | None:intergenic |
| CATTTACAATGGTAGGGTTG+AGG | 0.458343 | 3.3:+70961878 | MS.gene75639:CDS |
| AGTCGCATCGATCCCTTACC+GGG | 0.459967 | 3.3:+70964011 | MS.gene75639:CDS |
| ATTTACAATGGTAGGGTTGA+GGG | 0.460450 | 3.3:+70961879 | MS.gene75639:CDS |
| TTTACTCTCCTTGCTCGAGC+TGG | 0.461579 | 3.3:+70965732 | MS.gene75639:CDS |
| AAAGGCAATACAACGAGTAT+TGG | 0.467765 | 3.3:+70966050 | MS.gene75639:CDS |
| TCTGCAACCCTAGGTTCCTT+CGG | 0.469011 | 3.3:+70960913 | MS.gene75639:CDS |
| TTTGATGCCTTCCTGGTCAA+GGG | 0.470271 | 3.3:-70966028 | None:intergenic |
| AATACTTGAAGAGCTATTGC+AGG | 0.471841 | 3.3:+70964043 | MS.gene75639:CDS |
| CGAAGAGCATCATGAGAGTC+GGG | 0.473813 | 3.3:-70961162 | None:intergenic |
| TATTCAAAACATATCAACAT+AGG | 0.473981 | 3.3:+70962754 | MS.gene75639:CDS |
| TATTGTCTCCAGCCCCGGTA+AGG | 0.478626 | 3.3:-70964024 | None:intergenic |
| TGAAGTAGAGATCGTCAGAT+TGG | 0.479506 | 3.3:+70961823 | MS.gene75639:intron |
| GTCATCCCAGGCACCTCCCA+TGG | 0.479573 | 3.3:+70965701 | MS.gene75639:intron |
| TCATGAGAGTCGGGAGCAGA+AGG | 0.482800 | 3.3:-70961153 | None:intergenic |
| AAATACCTTCACTGATAAGA+TGG | 0.485562 | 3.3:-70962310 | None:intergenic |
| GAGCAAGGAGAGTAAACCTT+TGG | 0.486180 | 3.3:-70965725 | None:intergenic |
| ATTCAAAACATATCAACATA+GGG | 0.487004 | 3.3:+70962755 | MS.gene75639:CDS |
| GAAATTGGTCTTATCTGAAA+AGG | 0.487701 | 3.3:+70962714 | MS.gene75639:CDS |
| TCATCACAATTCTAAAATCA+TGG | 0.491870 | 3.3:+70961065 | MS.gene75639:CDS |
| GTAGTACTGCTGAAAGAATC+GGG | 0.493011 | 3.3:-70963984 | None:intergenic |
| TTCTGAGATATGTATTAGTC+CGG | 0.505166 | 3.3:-70962951 | None:intergenic |
| GAGAGTAAACCTTTGGTCCA+TGG | 0.508023 | 3.3:-70965718 | None:intergenic |
| ATTGAAAGGATTGACGATTG+AGG | 0.512516 | 3.3:-70960989 | None:intergenic |
| AGAGTAAACCTTTGGTCCAT+GGG | 0.520509 | 3.3:-70965717 | None:intergenic |
| TTGTCCAGAGTTTCTAGCAG+TGG | 0.520893 | 3.3:-70963528 | None:intergenic |
| TTATAGTAGACGAGGAGAAA+CGG | 0.524178 | 3.3:+70962692 | MS.gene75639:CDS |
| CCTTGCTCGAGCTGGAAGAC+AGG | 0.524839 | 3.3:+70965740 | MS.gene75639:CDS |
| TTGACGATTGAGGAAGAAGA+AGG | 0.528513 | 3.3:-70960979 | None:intergenic |
| TCAAGTATTGTCTCCAGCCC+CGG | 0.530416 | 3.3:-70964029 | None:intergenic |
| AAGAGCTATTGCAGGAAGAT+GGG | 0.530885 | 3.3:+70964051 | MS.gene75639:CDS |
| GTTCATCTGCGCTTCCCTGA+CGG | 0.533095 | 3.3:+70962826 | MS.gene75639:CDS |
| AGATCCACTGCTAGAAACTC+TGG | 0.537122 | 3.3:+70963524 | MS.gene75639:CDS |
| GTAAGAGACTTCTTAAGAGA+AGG | 0.538732 | 3.3:+70962998 | MS.gene75639:CDS |
| GTGGACTCATTTACAATGGT+AGG | 0.540686 | 3.3:+70961871 | MS.gene75639:CDS |
| GCTATCTTCTCTGCAACCCT+AGG | 0.540971 | 3.3:+70960904 | MS.gene75639:CDS |
| ACGGGGCTCAGCTGTGAGAA+CGG | 0.547720 | 3.3:-70961954 | None:intergenic |
| GTAGAGATCGTCAGATTGGA+AGG | 0.553487 | 3.3:+70961827 | MS.gene75639:intron |
| ACGAAGAGCATCATGAGAGT+CGG | 0.553818 | 3.3:-70961163 | None:intergenic |
| AGCAAGAGTCGGTTCTGTTG+AGG | 0.555824 | 3.3:+70962789 | MS.gene75639:CDS |
| ACATGGCACCGAAGGAACCT+AGG | 0.560207 | 3.3:-70960921 | None:intergenic |
| ATACCTTGACATGAATGCAC+GGG | 0.560834 | 3.3:-70961972 | None:intergenic |
| TACATATCTCAGAAGTGTCG+TGG | 0.561533 | 3.3:+70962960 | MS.gene75639:CDS |
| CAAGGTGGTGGTAACTTGCG+AGG | 0.565879 | 3.3:-70961024 | None:intergenic |
| TAAGAGAAGGTGAAGAAGTG+AGG | 0.569636 | 3.3:+70963011 | MS.gene75639:CDS |
| AAGAGAAGGTGAAGAAGTGA+GGG | 0.569971 | 3.3:+70963012 | MS.gene75639:CDS |
| ATTGTCTCCAGCCCCGGTAA+GGG | 0.572119 | 3.3:-70964023 | None:intergenic |
| TGGACTCATTTACAATGGTA+GGG | 0.572453 | 3.3:+70961872 | MS.gene75639:CDS |
| AGATATGTATTAGTCCGGTA+AGG | 0.575895 | 3.3:-70962946 | None:intergenic |
| GGGCATTTAGGGAAATTGAA+AGG | 0.576571 | 3.3:-70961003 | None:intergenic |
| TAGAGTAAAACCGAACCAGC+AGG | 0.577882 | 3.3:-70961917 | None:intergenic |
| CCTGTCTTCCAGCTCGAGCA+AGG | 0.580250 | 3.3:-70965740 | None:intergenic |
| TAGTGCCACTGGCAAGGTGG+TGG | 0.581006 | 3.3:-70961036 | None:intergenic |
| CGGTTCCATCTTATCAGTGA+AGG | 0.581265 | 3.3:+70962305 | MS.gene75639:CDS |
| AGGCACCTCCCATGGACCAA+AGG | 0.593592 | 3.3:+70965709 | MS.gene75639:intron |
| TCTGGACAAAGTAATACCTC+AGG | 0.594718 | 3.3:+70963542 | MS.gene75639:CDS |
| GAGGAAGGACATGGCACCGA+AGG | 0.595181 | 3.3:-70960929 | None:intergenic |
| TGATGCTCTTCGTCAAGCCA+GGG | 0.599111 | 3.3:+70961173 | MS.gene75639:CDS |
| TGATTGTGAAGATGAGAGGA+AGG | 0.601524 | 3.3:-70960944 | None:intergenic |
| GTTGTGATTGTGAAGATGAG+AGG | 0.605556 | 3.3:-70960948 | None:intergenic |
| AGCCCCGTGCATTCATGTCA+AGG | 0.606788 | 3.3:+70961969 | MS.gene75639:CDS |
| ACATATCTCAGAAGTGTCGT+GGG | 0.608336 | 3.3:+70962961 | MS.gene75639:CDS |
| TCTGAAAACATCCCTTGACC+AGG | 0.610102 | 3.3:+70966017 | MS.gene75639:CDS |
| CATGGCACCGAAGGAACCTA+GGG | 0.612699 | 3.3:-70960920 | None:intergenic |
| GATGCAAGAATCAGTCGTCA+GGG | 0.617292 | 3.3:+70965559 | MS.gene75639:CDS |
| GAACTTGCAAGAGAGTTGAT+CGG | 0.625345 | 3.3:+70962285 | MS.gene75639:CDS |
| TGACGATTGAGGAAGAAGAA+GGG | 0.626651 | 3.3:-70960978 | None:intergenic |
| TTGCATAGTAGTTACCGTCA+GGG | 0.635380 | 3.3:-70962840 | None:intergenic |
| GATACCTTGACATGAATGCA+CGG | 0.637484 | 3.3:-70961973 | None:intergenic |
| AAAACATCCCTTGACCAGGA+AGG | 0.640351 | 3.3:+70966021 | MS.gene75639:CDS |
| CATGAGAGTCGGGAGCAGAA+GGG | 0.642717 | 3.3:-70961152 | None:intergenic |
| GATGATGACGATAGTGCCAC+TGG | 0.643763 | 3.3:-70961047 | None:intergenic |
| AAGGTGGTGGTAACTTGCGA+GGG | 0.646784 | 3.3:-70961023 | None:intergenic |
| GACAGTGGACTCATTTACAA+TGG | 0.649720 | 3.3:+70961867 | MS.gene75639:CDS |
| TGAAGATGAGAGGAAGGACA+TGG | 0.660623 | 3.3:-70960938 | None:intergenic |
| TTCAAAACATATCAACATAG+GGG | 0.663132 | 3.3:+70962756 | MS.gene75639:CDS |
| AGTTACCACCACCTTGCCAG+TGG | 0.668620 | 3.3:+70961031 | MS.gene75639:CDS |
| TGACGATAGTGCCACTGGCA+AGG | 0.670149 | 3.3:-70961042 | None:intergenic |
| GTAAACCTTTGGTCCATGGG+AGG | 0.670349 | 3.3:-70965714 | None:intergenic |
| ATGCAAGAATCAGTCGTCAG+GGG | 0.684889 | 3.3:+70965560 | MS.gene75639:CDS |
| CATATTGATGAATTCGACAG+TGG | 0.686608 | 3.3:+70961117 | MS.gene75639:CDS |
| GCAAACGCATATAGAGACAG+TGG | 0.691753 | 3.3:+70961852 | MS.gene75639:CDS |
| TTAGGTAATTATAGTAGACG+AGG | 0.708605 | 3.3:+70962684 | MS.gene75639:intron |
| TACCTTGACATGAATGCACG+GGG | 0.710872 | 3.3:-70961971 | None:intergenic |
| GTCGCATCGATCCCTTACCG+GGG | 0.720668 | 3.3:+70964012 | MS.gene75639:CDS |
| CGATAGTGCCACTGGCAAGG+TGG | 0.751025 | 3.3:-70961039 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTATTAAAAAAAAAAA+TGG | + | chr3.3:70965653-70965672 | MS.gene75639:intron | 0.0% |
| !! | ATGCTTATAAATTATAATTA+GGG | + | chr3.3:70963791-70963810 | MS.gene75639:intron | 10.0% |
| !! | TAATATATTATTACAAAGAA+AGG | + | chr3.3:70964181-70964200 | MS.gene75639:intron | 10.0% |
| !! | TAATTACTATAAAAGAAATT+GGG | - | chr3.3:70963195-70963214 | None:intergenic | 10.0% |
| !! | TATGCTTATAAATTATAATT+AGG | + | chr3.3:70963790-70963809 | MS.gene75639:intron | 10.0% |
| !! | TTAATTACTATAAAAGAAAT+TGG | - | chr3.3:70963196-70963215 | None:intergenic | 10.0% |
| !!! | TATAATTTATAAGCATATTT+TGG | - | chr3.3:70963787-70963806 | None:intergenic | 10.0% |
| !! | AAATCCATAATAATATAATG+GGG | + | chr3.3:70965230-70965249 | MS.gene75639:intron | 15.0% |
| !! | ATTTATATATGCATGAATAT+GGG | + | chr3.3:70963831-70963850 | MS.gene75639:intron | 15.0% |
| !! | GAAATCCATAATAATATAAT+GGG | + | chr3.3:70965229-70965248 | MS.gene75639:intron | 15.0% |
| !! | GTCATATATACATTATATTA+GGG | - | chr3.3:70965509-70965528 | None:intergenic | 15.0% |
| !! | TATTTATATATGCATGAATA+TGG | + | chr3.3:70963830-70963849 | MS.gene75639:intron | 15.0% |
| !! | TCATATATACATTATATTAG+GGG | - | chr3.3:70965508-70965527 | None:intergenic | 15.0% |
| !! | TGAAATCCATAATAATATAA+TGG | + | chr3.3:70965228-70965247 | MS.gene75639:intron | 15.0% |
| !! | TGCATATATAAATACTAAAT+AGG | - | chr3.3:70963824-70963843 | None:intergenic | 15.0% |
| !! | TGTCATATATACATTATATT+AGG | - | chr3.3:70965510-70965529 | None:intergenic | 15.0% |
| !! | TGTCTTAAATTTATAAATGA+CGG | + | chr3.3:70962646-70962665 | MS.gene75639:intron | 15.0% |
| !! | TTCAATTTAATCATAATAGT+AGG | + | chr3.3:70962193-70962212 | MS.gene75639:intron | 15.0% |
| !!! | AATATATTTCTAATTTGTTG+AGG | + | chr3.3:70965948-70965967 | MS.gene75639:intron | 15.0% |
| !!! | ATAGTAATTAACTATGTTTT+TGG | + | chr3.3:70963205-70963224 | MS.gene75639:intron | 15.0% |
| !!! | CAGCTTATATTTAAAATTTA+TGG | + | chr3.3:70961361-70961380 | MS.gene75639:intron | 15.0% |
| !!! | TTATTTTCTCAAATTATTAG+CGG | - | chr3.3:70961524-70961543 | None:intergenic | 15.0% |
| !! | AAAACTAATGTATATTCTTG+CGG | + | chr3.3:70962451-70962470 | MS.gene75639:intron | 20.0% |
| !! | AAATTAGGTATATGAATCAA+AGG | + | chr3.3:70964412-70964431 | MS.gene75639:intron | 20.0% |
| !! | AAGTAAGTTTCTTTGTATTT+AGG | + | chr3.3:70961284-70961303 | MS.gene75639:intron | 20.0% |
| !! | AATCCATAATAATATAATGG+GGG | + | chr3.3:70965231-70965250 | MS.gene75639:intron | 20.0% |
| !! | AGATAGAACTAGAATTAAAA+GGG | + | chr3.3:70964583-70964602 | MS.gene75639:intron | 20.0% |
| !! | AGTAAGTTTCTTTGTATTTA+GGG | + | chr3.3:70961285-70961304 | MS.gene75639:intron | 20.0% |
| !! | AGTAATTATCATACACAAAA+GGG | - | chr3.3:70963606-70963625 | None:intergenic | 20.0% |
| !! | AGTGTAGTGAAATTAATATT+AGG | - | chr3.3:70961423-70961442 | None:intergenic | 20.0% |
| !! | ATTCAAAACATATCAACATA+GGG | + | chr3.3:70962755-70962774 | MS.gene75639:CDS | 20.0% |
| !! | TAAGAGTTTGATAGATTTAA+AGG | - | chr3.3:70962520-70962539 | None:intergenic | 20.0% |
| !! | TAATAGACTATTACTTTAGA+AGG | - | chr3.3:70963081-70963100 | None:intergenic | 20.0% |
| !! | TAGTAATTATCATACACAAA+AGG | - | chr3.3:70963607-70963626 | None:intergenic | 20.0% |
| !! | TATTCAAAACATATCAACAT+AGG | + | chr3.3:70962754-70962773 | MS.gene75639:CDS | 20.0% |
| !! | TTAAATACATTTATACACCA+AGG | - | chr3.3:70963636-70963655 | None:intergenic | 20.0% |
| !! | TTTAGAGATGATTTATGATA+AGG | + | chr3.3:70964611-70964630 | MS.gene75639:intron | 20.0% |
| !! | TTTCTATTATAAATGTTTGC+TGG | + | chr3.3:70963129-70963148 | MS.gene75639:intron | 20.0% |
| !!! | AACTTTTCTTTACAATAATG+AGG | + | chr3.3:70963329-70963348 | MS.gene75639:intron | 20.0% |
| !!! | TAGGTTTTTATATTAGATGT+AGG | - | chr3.3:70961404-70961423 | None:intergenic | 20.0% |
| !!! | TTTTGATATCTGAATCTTTT+TGG | + | chr3.3:70965679-70965698 | MS.gene75639:intron | 20.0% |
| ! | AAAATTCATTCACATGTCTT+GGG | - | chr3.3:70963417-70963436 | None:intergenic | 25.0% |
| ! | AAAGAAATATTGAAACCGTA+TGG | - | chr3.3:70964150-70964169 | None:intergenic | 25.0% |
| ! | AAGAAATATTGAAACCGTAT+GGG | - | chr3.3:70964149-70964168 | None:intergenic | 25.0% |
| ! | ACTAAATTATGAAAAGATGG+TGG | + | chr3.3:70964449-70964468 | MS.gene75639:intron | 25.0% |
| ! | AGATGTAGGTTATATAGTTA+AGG | - | chr3.3:70961390-70961409 | None:intergenic | 25.0% |
| ! | AGGACTAAATTATGAAAAGA+TGG | + | chr3.3:70964446-70964465 | MS.gene75639:intron | 25.0% |
| ! | ATAGATAGTAATAATGCCTA+AGG | + | chr3.3:70964204-70964223 | MS.gene75639:intron | 25.0% |
| ! | ATATGAATCAAAGGAAAATC+AGG | + | chr3.3:70964421-70964440 | MS.gene75639:intron | 25.0% |
| ! | ATCTCTTTATAAACACAACT+AGG | - | chr3.3:70965888-70965907 | None:intergenic | 25.0% |
| ! | ATGCAAACTTTGTATGTTTA+TGG | + | chr3.3:70962857-70962876 | MS.gene75639:intron | 25.0% |
| ! | ATTCCCCCATTATATTATTA+TGG | - | chr3.3:70965237-70965256 | None:intergenic | 25.0% |
| ! | CAACAAAACTACATATTGTT+GGG | - | chr3.3:70964918-70964937 | None:intergenic | 25.0% |
| ! | CAAGAATAACAAAATTTCTG+TGG | - | chr3.3:70965155-70965174 | None:intergenic | 25.0% |
| ! | CACACAATTAAATGACTAAA+TGG | - | chr3.3:70962150-70962169 | None:intergenic | 25.0% |
| ! | CATTTAGTCATTTAATTGTG+TGG | + | chr3.3:70962148-70962167 | MS.gene75639:intron | 25.0% |
| ! | GAGATAGAACTAGAATTAAA+AGG | + | chr3.3:70964582-70964601 | MS.gene75639:intron | 25.0% |
| ! | GATAATTACTATGTTATCCT+TGG | + | chr3.3:70963616-70963635 | MS.gene75639:intron | 25.0% |
| ! | GATAGAACTAGAATTAAAAG+GGG | + | chr3.3:70964584-70964603 | MS.gene75639:intron | 25.0% |
| ! | GCATACAAGATAATGAAATT+AGG | + | chr3.3:70964397-70964416 | MS.gene75639:intron | 25.0% |
| ! | TAAAATTCATTCACATGTCT+TGG | - | chr3.3:70963418-70963437 | None:intergenic | 25.0% |
| ! | TAAATACTTCAAACAGTGAT+AGG | - | chr3.3:70964083-70964102 | None:intergenic | 25.0% |
| ! | TATGAATCAAAGGAAAATCA+GGG | + | chr3.3:70964422-70964441 | MS.gene75639:intron | 25.0% |
| ! | TCAACAAAACTACATATTGT+TGG | - | chr3.3:70964919-70964938 | None:intergenic | 25.0% |
| ! | TCTCATTTACAATTATAGCA+TGG | - | chr3.3:70964818-70964837 | None:intergenic | 25.0% |
| ! | TCTCTTTATAAACACAACTA+GGG | - | chr3.3:70965887-70965906 | None:intergenic | 25.0% |
| ! | TGTAATAAGGAAAACAAAGA+AGG | - | chr3.3:70965060-70965079 | None:intergenic | 25.0% |
| ! | TTACAATAAACTACCAATGT+CGG | - | chr3.3:70961681-70961700 | None:intergenic | 25.0% |
| ! | TTCAAAACATATCAACATAG+GGG | + | chr3.3:70962756-70962775 | MS.gene75639:CDS | 25.0% |
| ! | TTGAAATGACTCAAATCATA+TGG | - | chr3.3:70962485-70962504 | None:intergenic | 25.0% |
| ! | TTTCCATGATAAAGTGAAAA+AGG | - | chr3.3:70962886-70962905 | None:intergenic | 25.0% |
| ! | TTTCTTAATCCTATCAACTT+AGG | + | chr3.3:70961227-70961246 | MS.gene75639:intron | 25.0% |
| !! | ACTTTAGAAGGCATAAATAT+TGG | - | chr3.3:70963069-70963088 | None:intergenic | 25.0% |
| !! | ATTTAGTTTATACAAACCTG+AGG | - | chr3.3:70963561-70963580 | None:intergenic | 25.0% |
| !! | GTTTGAAGTATTTAACTACT+TGG | + | chr3.3:70964089-70964108 | MS.gene75639:intron | 25.0% |
| !! | TTTTACACTGCAAGATTAAA+TGG | - | chr3.3:70963469-70963488 | None:intergenic | 25.0% |
| !!! | ACCATGATTTTAGAATTGTA+AGG | - | chr3.3:70962025-70962044 | None:intergenic | 25.0% |
| !!! | TAATATTCTCCTAAGTTGAT+AGG | - | chr3.3:70961239-70961258 | None:intergenic | 25.0% |
| !!! | TCACTAGTTTTGTAAGTAAA+AGG | - | chr3.3:70964985-70965004 | None:intergenic | 25.0% |
| !!! | TCATCACAATTCTAAAATCA+TGG | + | chr3.3:70961065-70961084 | MS.gene75639:CDS | 25.0% |
| !!! | TCCTTACAATTCTAAAATCA+TGG | + | chr3.3:70962021-70962040 | MS.gene75639:intron | 25.0% |
| AAAAAAGTCAACATGCATGT+TGG | - | chr3.3:70963444-70963463 | None:intergenic | 30.0% | |
| AAATACCTTCACTGATAAGA+TGG | - | chr3.3:70962313-70962332 | None:intergenic | 30.0% | |
| AATAAGGAAAACAAAGAAGG+TGG | - | chr3.3:70965057-70965076 | None:intergenic | 30.0% | |
| AATCTTGCAGTGTAAAAATG+AGG | + | chr3.3:70963472-70963491 | MS.gene75639:intron | 30.0% | |
| AATTTGCAATAAGTCAGTAG+TGG | - | chr3.3:70962227-70962246 | None:intergenic | 30.0% | |
| ACACCTACTAATTTGAAAGA+GGG | + | chr3.3:70963736-70963755 | MS.gene75639:intron | 30.0% | |
| ACCTAATTCAGCATAAACAA+CGG | - | chr3.3:70962586-70962605 | None:intergenic | 30.0% | |
| AGAAATATTGAAACCGTATG+GGG | - | chr3.3:70964148-70964167 | None:intergenic | 30.0% | |
| ATCAGTAAGTCAGAGTTAAA+AGG | + | chr3.3:70964529-70964548 | MS.gene75639:intron | 30.0% | |
| ATGAATCAAAGGAAAATCAG+GGG | + | chr3.3:70964423-70964442 | MS.gene75639:intron | 30.0% | |
| ATTATCATACACAAAAGGGA+CGG | - | chr3.3:70963602-70963621 | None:intergenic | 30.0% | |
| TAACTCATCATTACACTCAT+TGG | + | chr3.3:70964849-70964868 | MS.gene75639:intron | 30.0% | |
| TCAACTCGTACATTGTAATA+AGG | - | chr3.3:70965073-70965092 | None:intergenic | 30.0% | |
| TGTAATAATATGTGTCGTCT+CGG | + | chr3.3:70961554-70961573 | MS.gene75639:intron | 30.0% | |
| TTAGGTAATTATAGTAGACG+AGG | + | chr3.3:70962684-70962703 | MS.gene75639:intron | 30.0% | |
| TTATGTGTTGTATTTGCCAA+CGG | + | chr3.3:70961449-70961468 | MS.gene75639:intron | 30.0% | |
| TTGCAATTTATCTGCATTCA+GGG | + | chr3.3:70965435-70965454 | MS.gene75639:intron | 30.0% | |
| TTTGCAATTTATCTGCATTC+AGG | + | chr3.3:70965434-70965453 | MS.gene75639:intron | 30.0% | |
| ! | ATGGATGTATCTCTGATTTT+GGG | - | chr3.3:70964119-70964138 | None:intergenic | 30.0% |
| ! | ATGTCTTGTGAAAGTGTAAT+GGG | - | chr3.3:70964351-70964370 | None:intergenic | 30.0% |
| ! | TAGAACACAACACATTTTAG+AGG | - | chr3.3:70961786-70961805 | None:intergenic | 30.0% |
| ! | TCACAGGAAAAAAAGGTATA+TGG | - | chr3.3:70962350-70962369 | None:intergenic | 30.0% |
| !! | CATCCTTTTTCACTTTATCA+TGG | + | chr3.3:70962880-70962899 | MS.gene75639:intron | 30.0% |
| !! | GAAATTGGTCTTATCTGAAA+AGG | + | chr3.3:70962714-70962733 | MS.gene75639:CDS | 30.0% |
| !! | GTTTTAGTATCATTGCTTGT+TGG | + | chr3.3:70963166-70963185 | MS.gene75639:intron | 30.0% |
| !! | TCATTTGATTACCGTTTTTC+TGG | + | chr3.3:70964646-70964665 | MS.gene75639:intron | 30.0% |
| !! | TTCTGAGATATGTATTAGTC+CGG | - | chr3.3:70962954-70962973 | None:intergenic | 30.0% |
| !! | TTTACATTTTTGAGCCACTT+TGG | - | chr3.3:70964268-70964287 | None:intergenic | 30.0% |
| !! | TTTCGTTTTTCTGTATTGGA+GGG | - | chr3.3:70964238-70964257 | None:intergenic | 30.0% |
| !!! | AGTTCTTGGATAGTTTTATC+TGG | - | chr3.3:70962270-70962289 | None:intergenic | 30.0% |
| !!! | GGTGTGGTTTCTTTTTTATT+AGG | - | chr3.3:70964324-70964343 | None:intergenic | 30.0% |
| AAAGGCAATACAACGAGTAT+TGG | + | chr3.3:70966050-70966069 | MS.gene75639:CDS | 35.0% | |
| AAATAGAGAAGCCGCAAATA+GGG | - | chr3.3:70962379-70962398 | None:intergenic | 35.0% | |
| AAGCACTACTACTACTACTA+TGG | - | chr3.3:70962002-70962021 | None:intergenic | 35.0% | |
| AAGCCCTCTTTCAAATTAGT+AGG | - | chr3.3:70963742-70963761 | None:intergenic | 35.0% | |
| AATACTTGAAGAGCTATTGC+AGG | + | chr3.3:70964043-70964062 | MS.gene75639:CDS | 35.0% | |
| AATTGAAGAAATACAGACCC+TGG | - | chr3.3:70961193-70961212 | None:intergenic | 35.0% | |
| ACATTGCTTGTGATTCTCTT+TGG | + | chr3.3:70961711-70961730 | MS.gene75639:intron | 35.0% | |
| ACCAACAAAGTCTACATTCA+GGG | - | chr3.3:70965302-70965321 | None:intergenic | 35.0% | |
| ACTAAAAGAGTCTGCATTCA+GGG | + | chr3.3:70965406-70965425 | MS.gene75639:intron | 35.0% | |
| ACTACTACTACTAGATACCA+TGG | - | chr3.3:70961085-70961104 | None:intergenic | 35.0% | |
| AGAAATCTTCCAACAGTAAC+AGG | - | chr3.3:70964697-70964716 | None:intergenic | 35.0% | |
| AGACTTTGTTGGTCAATTTC+AGG | + | chr3.3:70965309-70965328 | MS.gene75639:intron | 35.0% | |
| AGATATGTATTAGTCCGGTA+AGG | - | chr3.3:70962949-70962968 | None:intergenic | 35.0% | |
| AGTAGTACTGCTGAAAGAAT+CGG | - | chr3.3:70963988-70964007 | None:intergenic | 35.0% | |
| ATTGAAAGGATTGACGATTG+AGG | - | chr3.3:70960992-70961011 | None:intergenic | 35.0% | |
| ATTTACAATGGTAGGGTTGA+GGG | + | chr3.3:70961879-70961898 | MS.gene75639:CDS | 35.0% | |
| CAAAAATGTAAACAGCTGCT+TGG | + | chr3.3:70964276-70964295 | MS.gene75639:intron | 35.0% | |
| CACACCTACTAATTTGAAAG+AGG | + | chr3.3:70963735-70963754 | MS.gene75639:intron | 35.0% | |
| CATATTGATGAATTCGACAG+TGG | + | chr3.3:70961117-70961136 | MS.gene75639:CDS | 35.0% | |
| GACTTTGTTGGTCAATTTCA+GGG | + | chr3.3:70965310-70965329 | MS.gene75639:intron | 35.0% | |
| GGATTAAGCAACACAAAATG+TGG | + | chr3.3:70961306-70961325 | MS.gene75639:intron | 35.0% | |
| GTAAGAGACTTCTTAAGAGA+AGG | + | chr3.3:70962998-70963017 | MS.gene75639:CDS | 35.0% | |
| GTTCCAAACAAGAACCAAAA+AGG | - | chr3.3:70961657-70961676 | None:intergenic | 35.0% | |
| GTTGGATTCACAGGAAAAAA+AGG | - | chr3.3:70962357-70962376 | None:intergenic | 35.0% | |
| TAAATAGAGAAGCCGCAAAT+AGG | - | chr3.3:70962380-70962399 | None:intergenic | 35.0% | |
| TACATAACTCCTGTTACTGT+TGG | + | chr3.3:70964685-70964704 | MS.gene75639:intron | 35.0% | |
| TACTGATCTGTTCTCTTTAC+TGG | - | chr3.3:70964516-70964535 | None:intergenic | 35.0% | |
| TATCTGAAAAGGAAGCTTCA+TGG | + | chr3.3:70962725-70962744 | MS.gene75639:CDS | 35.0% | |
| TATGTGTTGTATTTGCCAAC+GGG | + | chr3.3:70961450-70961469 | MS.gene75639:intron | 35.0% | |
| TCAAGCAGTTTCCAGAAAAA+CGG | - | chr3.3:70964660-70964679 | None:intergenic | 35.0% | |
| TCAGGGACTAAATTGACTAA+AGG | + | chr3.3:70965359-70965378 | MS.gene75639:intron | 35.0% | |
| TCCGTTGTTTATGCTGAATT+AGG | + | chr3.3:70962582-70962601 | MS.gene75639:intron | 35.0% | |
| TCTCAAATTATTAGCGGTGT+CGG | - | chr3.3:70961518-70961537 | None:intergenic | 35.0% | |
| TGAAAGAGGGCTTGTATTTA+GGG | + | chr3.3:70963749-70963768 | MS.gene75639:intron | 35.0% | |
| TGAGGATGAATTGTGATGTA+AGG | - | chr3.3:70962118-70962137 | None:intergenic | 35.0% | |
| TGCATGCTAGGTTTAACAAA+TGG | + | chr3.3:70962622-70962641 | MS.gene75639:intron | 35.0% | |
| TGGACTCATTTACAATGGTA+GGG | + | chr3.3:70961872-70961891 | MS.gene75639:CDS | 35.0% | |
| TTATAGTAGACGAGGAGAAA+CGG | + | chr3.3:70962692-70962711 | MS.gene75639:CDS | 35.0% | |
| TTATGGTACCAAAATGATGC+AGG | - | chr3.3:70962562-70962581 | None:intergenic | 35.0% | |
| TTGAAAGAGGGCTTGTATTT+AGG | + | chr3.3:70963748-70963767 | MS.gene75639:intron | 35.0% | |
| TTGCAATTTCTCTGCATTCA+AGG | - | chr3.3:70965273-70965292 | None:intergenic | 35.0% | |
| ! | ATATTTTCAACCTGCATGCT+AGG | + | chr3.3:70962610-70962629 | MS.gene75639:intron | 35.0% |
| ! | ATTTGTTAAACCTAGCATGC+AGG | - | chr3.3:70962623-70962642 | None:intergenic | 35.0% |
| ! | GATGGATGTATCTCTGATTT+TGG | - | chr3.3:70964120-70964139 | None:intergenic | 35.0% |
| ! | GATGTCTTGTGAAAGTGTAA+TGG | - | chr3.3:70964352-70964371 | None:intergenic | 35.0% |
| ! | GCAAAAATGGTTGACCTTTT+TGG | + | chr3.3:70961640-70961659 | MS.gene75639:intron | 35.0% |
| ! | GTTCGGTTTTACTCTATCAT+GGG | + | chr3.3:70961924-70961943 | MS.gene75639:CDS | 35.0% |
| ! | TGTGAAAGTGTAATGGGATA+AGG | - | chr3.3:70964345-70964364 | None:intergenic | 35.0% |
| !! | ATGAAAAGATGGTGGAATCT+CGG | + | chr3.3:70964457-70964476 | MS.gene75639:intron | 35.0% |
| !! | CTGCTTTCGTTTTTCTGTAT+TGG | - | chr3.3:70964242-70964261 | None:intergenic | 35.0% |
| !! | CTTTCGTTTTTCTGTATTGG+AGG | - | chr3.3:70964239-70964258 | None:intergenic | 35.0% |
| !! | TATCTGGTTCTGAACAGAAA+AGG | - | chr3.3:70962254-70962273 | None:intergenic | 35.0% |
| !! | TCAGCATAAACAACGGATTA+TGG | - | chr3.3:70962579-70962598 | None:intergenic | 35.0% |
| !! | TGTTGATAATTGCTGCTCTT+TGG | + | chr3.3:70964933-70964952 | MS.gene75639:intron | 35.0% |
| !!! | TGACCTTTTTGGTTCTTGTT+TGG | + | chr3.3:70961651-70961670 | MS.gene75639:intron | 35.0% |
| AAGAGAAGGTGAAGAAGTGA+GGG | + | chr3.3:70963012-70963031 | MS.gene75639:CDS | 40.0% | |
| AAGAGCTATTGCAGGAAGAT+GGG | + | chr3.3:70964051-70964070 | MS.gene75639:CDS | 40.0% | |
| AATCAAAGGAAAATCAGGGG+AGG | + | chr3.3:70964426-70964445 | MS.gene75639:intron | 40.0% | |
| AATCACAAGCAATGTCAGCA+AGG | - | chr3.3:70961706-70961725 | None:intergenic | 40.0% | |
| ACAGCTTAGAAACCGAAAGT+CGG | - | chr3.3:70963270-70963289 | None:intergenic | 40.0% | |
| ACATCCACTTCATGATGTTG+GGG | + | chr3.3:70965860-70965879 | MS.gene75639:intron | 40.0% | |
| ACTAACGGAGTCTACATTCA+GGG | + | chr3.3:70965342-70965361 | MS.gene75639:intron | 40.0% | |
| AGAGTAAACCTTTGGTCCAT+GGG | - | chr3.3:70965720-70965739 | None:intergenic | 40.0% | |
| ATACCTTGACATGAATGCAC+GGG | - | chr3.3:70961975-70961994 | None:intergenic | 40.0% | |
| ATGTGTTGTATTTGCCAACG+GGG | + | chr3.3:70961451-70961470 | MS.gene75639:intron | 40.0% | |
| CACATCCACTTCATGATGTT+GGG | + | chr3.3:70965859-70965878 | MS.gene75639:intron | 40.0% | |
| CATTTACAATGGTAGGGTTG+AGG | + | chr3.3:70961878-70961897 | MS.gene75639:CDS | 40.0% | |
| CCATCCTGCAAAATGAAACT+CGG | - | chr3.3:70963954-70963973 | None:intergenic | 40.0% | |
| CTTTAGTCCCTGAATAGGAA+AGG | - | chr3.3:70965476-70965495 | None:intergenic | 40.0% | |
| GACCAACAAAGTCTACATTC+AGG | - | chr3.3:70965303-70965322 | None:intergenic | 40.0% | |
| GACTAAAAGAGTCTGCATTC+AGG | + | chr3.3:70965405-70965424 | MS.gene75639:intron | 40.0% | |
| GATACCTTGACATGAATGCA+CGG | - | chr3.3:70961976-70961995 | None:intergenic | 40.0% | |
| GGGCATTTAGGGAAATTGAA+AGG | - | chr3.3:70961006-70961025 | None:intergenic | 40.0% | |
| GTAAGTAAAAGGATCAGAGC+AGG | - | chr3.3:70964974-70964993 | None:intergenic | 40.0% | |
| GTAGTACTGCTGAAAGAATC+GGG | - | chr3.3:70963987-70964006 | None:intergenic | 40.0% | |
| GTGGACTCATTTACAATGGT+AGG | + | chr3.3:70961871-70961890 | MS.gene75639:CDS | 40.0% | |
| GTTGGGTGATTCAGACAATT+CGG | - | chr3.3:70964901-70964920 | None:intergenic | 40.0% | |
| GTTGTGATTGTGAAGATGAG+AGG | - | chr3.3:70960951-70960970 | None:intergenic | 40.0% | |
| TAAGAGAAGGTGAAGAAGTG+AGG | + | chr3.3:70963011-70963030 | MS.gene75639:CDS | 40.0% | |
| TACACGTCTGTGTGAATATG+CGG | + | chr3.3:70963862-70963881 | MS.gene75639:intron | 40.0% | |
| TATCCTACAAGCTAAGGAGA+TGG | + | chr3.3:70964720-70964739 | MS.gene75639:intron | 40.0% | |
| TATTAGTCCAGCTGAAGCTT+CGG | + | chr3.3:70962398-70962417 | MS.gene75639:intron | 40.0% | |
| TCAACTCTCTTGCAAGTTCT+TGG | - | chr3.3:70962284-70962303 | None:intergenic | 40.0% | |
| TCACATCCACTTCATGATGT+TGG | + | chr3.3:70965858-70965877 | MS.gene75639:intron | 40.0% | |
| TCACGCTCATACACACATTT+AGG | - | chr3.3:70963899-70963918 | None:intergenic | 40.0% | |
| TCAGGGACTAAAGTGACTAA+CGG | + | chr3.3:70965327-70965346 | MS.gene75639:intron | 40.0% | |
| TCCCTGAATGTAGACTTTGT+TGG | + | chr3.3:70965298-70965317 | MS.gene75639:intron | 40.0% | |
| TCCTTAATGCTTTGACACCA+TGG | + | chr3.3:70962067-70962086 | MS.gene75639:intron | 40.0% | |
| TCTCGTTATCCTACAAGCTA+AGG | + | chr3.3:70964714-70964733 | MS.gene75639:intron | 40.0% | |
| TCTGGACAAAGTAATACCTC+AGG | + | chr3.3:70963542-70963561 | MS.gene75639:CDS | 40.0% | |
| TCTTGGGAGAGTTTATGACA+TGG | - | chr3.3:70963401-70963420 | None:intergenic | 40.0% | |
| TGAAGTAGAGATCGTCAGAT+TGG | + | chr3.3:70961823-70961842 | MS.gene75639:intron | 40.0% | |
| TGACGATTGAGGAAGAAGAA+GGG | - | chr3.3:70960981-70961000 | None:intergenic | 40.0% | |
| TGATTGTGAAGATGAGAGGA+AGG | - | chr3.3:70960947-70960966 | None:intergenic | 40.0% | |
| TGTGAATCCAACCCTATTTG+CGG | + | chr3.3:70962365-70962384 | MS.gene75639:intron | 40.0% | |
| TTGACGATTGAGGAAGAAGA+AGG | - | chr3.3:70960982-70961001 | None:intergenic | 40.0% | |
| TTGCATAGTAGTTACCGTCA+GGG | - | chr3.3:70962843-70962862 | None:intergenic | 40.0% | |
| TTGGAGGGTTTCTTATCCTT+AGG | - | chr3.3:70964223-70964242 | None:intergenic | 40.0% | |
| TTTGCATAGTAGTTACCGTC+AGG | - | chr3.3:70962844-70962863 | None:intergenic | 40.0% | |
| ! | AACCGACTCTTGCTTCAAAA+AGG | - | chr3.3:70962783-70962802 | None:intergenic | 40.0% |
| ! | AACTCCGAGTTTCATTTTGC+AGG | + | chr3.3:70963947-70963966 | MS.gene75639:intron | 40.0% |
| ! | AAGTGTAATGGGATAAGGTG+TGG | - | chr3.3:70964340-70964359 | None:intergenic | 40.0% |
| ! | ACCATGGTGTCAAAGCATTA+AGG | - | chr3.3:70962071-70962090 | None:intergenic | 40.0% |
| ! | ACTAAAGGAGTGTGCATTCA+TGG | + | chr3.3:70965374-70965393 | MS.gene75639:intron | 40.0% |
| ! | AGTCACTTTAGTCCCTGAAT+AGG | - | chr3.3:70965481-70965500 | None:intergenic | 40.0% |
| ! | GAACTTGCAAGAGAGTTGAT+CGG | + | chr3.3:70962285-70962304 | MS.gene75639:CDS | 40.0% |
| ! | GACAGTGGACTCATTTACAA+TGG | + | chr3.3:70961867-70961886 | MS.gene75639:CDS | 40.0% |
| ! | GCTTCATAGGTTGGCAAAAA+TGG | + | chr3.3:70961627-70961646 | MS.gene75639:intron | 40.0% |
| ! | TAGTGCTTCCTGCATCATTT+TGG | + | chr3.3:70962551-70962570 | MS.gene75639:intron | 40.0% |
| ! | TTCTGTCTTGAACCGACTTT+CGG | + | chr3.3:70963255-70963274 | MS.gene75639:intron | 40.0% |
| ! | TTTTGCCAACCTATGAAGCA+CGG | - | chr3.3:70961626-70961645 | None:intergenic | 40.0% |
| !! | ACATATCTCAGAAGTGTCGT+GGG | + | chr3.3:70962961-70962980 | MS.gene75639:CDS | 40.0% |
| !! | ACTAAATGGCATCGATAGTG+AGG | - | chr3.3:70962136-70962155 | None:intergenic | 40.0% |
| !! | GGTTCGGTTTTACTCTATCA+TGG | + | chr3.3:70961923-70961942 | MS.gene75639:CDS | 40.0% |
| !! | TACATATCTCAGAAGTGTCG+TGG | + | chr3.3:70962960-70962979 | MS.gene75639:CDS | 40.0% |
| !! | TGAATCTTTTTGGTCATCCC+AGG | + | chr3.3:70965689-70965708 | MS.gene75639:intron | 40.0% |
| !!! | CGGCACTTTCTTTTGACTTT+AGG | + | chr3.3:70962666-70962685 | MS.gene75639:intron | 40.0% |
| !!! | GACCTTTTTGAAGCAAGAGT+CGG | + | chr3.3:70962778-70962797 | MS.gene75639:CDS | 40.0% |
| AAAACATCCCTTGACCAGGA+AGG | + | chr3.3:70966021-70966040 | MS.gene75639:CDS | 45.0% | |
| AAAGGATCAGAGCAGGTCTT+AGG | - | chr3.3:70964967-70964986 | None:intergenic | 45.0% | |
| AACGAAAGCAGATGCCAAAG+TGG | + | chr3.3:70964251-70964270 | MS.gene75639:intron | 45.0% | |
| ACACGTCTGTGTGAATATGC+GGG | + | chr3.3:70963863-70963882 | MS.gene75639:intron | 45.0% | |
| AGACGAGGAGAAACGGAAAT+TGG | + | chr3.3:70962699-70962718 | MS.gene75639:CDS | 45.0% | |
| AGATCCACTGCTAGAAACTC+TGG | + | chr3.3:70963524-70963543 | MS.gene75639:CDS | 45.0% | |
| ATCATACACAAAAGGGACGG+AGG | - | chr3.3:70963599-70963618 | None:intergenic | 45.0% | |
| ATGCAAGAATCAGTCGTCAG+GGG | + | chr3.3:70965560-70965579 | MS.gene75639:CDS | 45.0% | |
| ATGTATCTCCTGAACCTGGA+TGG | - | chr3.3:70965998-70966017 | None:intergenic | 45.0% | |
| ATTGAAACCGTATGGGGCAA+GGG | - | chr3.3:70964142-70964161 | None:intergenic | 45.0% | |
| CAGACAATTCGGATGTAGAC+TGG | - | chr3.3:70964890-70964909 | None:intergenic | 45.0% | |
| CGGTTCCATCTTATCAGTGA+AGG | + | chr3.3:70962305-70962324 | MS.gene75639:CDS | 45.0% | |
| GAAGAGCTATTGCAGGAAGA+TGG | + | chr3.3:70964050-70964069 | MS.gene75639:CDS | 45.0% | |
| GACGACTCCTTTCCTATTCA+GGG | + | chr3.3:70965466-70965485 | MS.gene75639:intron | 45.0% | |
| GACTAACGGAGTCTACATTC+AGG | + | chr3.3:70965341-70965360 | MS.gene75639:intron | 45.0% | |
| GAGAGTAAACCTTTGGTCCA+TGG | - | chr3.3:70965721-70965740 | None:intergenic | 45.0% | |
| GAGCAAGGAGAGTAAACCTT+TGG | - | chr3.3:70965728-70965747 | None:intergenic | 45.0% | |
| GATGCAAGAATCAGTCGTCA+GGG | + | chr3.3:70965559-70965578 | MS.gene75639:CDS | 45.0% | |
| GCAAACGCATATAGAGACAG+TGG | + | chr3.3:70961852-70961871 | MS.gene75639:CDS | 45.0% | |
| GCAAATAGGGTTGGATTCAC+AGG | - | chr3.3:70962366-70962385 | None:intergenic | 45.0% | |
| GCAGGTCTTTATCACCTTAC+CGG | + | chr3.3:70962932-70962951 | MS.gene75639:intron | 45.0% | |
| GTAGAGATCGTCAGATTGGA+AGG | + | chr3.3:70961827-70961846 | MS.gene75639:intron | 45.0% | |
| TACCTTGACATGAATGCACG+GGG | - | chr3.3:70961974-70961993 | None:intergenic | 45.0% | |
| TAGAGTAAAACCGAACCAGC+AGG | - | chr3.3:70961920-70961939 | None:intergenic | 45.0% | |
| TATGAAGCACGGACACTACT+CGG | - | chr3.3:70961615-70961634 | None:intergenic | 45.0% | |
| TATTGAAACCGTATGGGGCA+AGG | - | chr3.3:70964143-70964162 | None:intergenic | 45.0% | |
| TCAGATGTATCTCCTGAACC+TGG | - | chr3.3:70966002-70966021 | None:intergenic | 45.0% | |
| TCAGGGGTTTGAAAAACGAG+TGG | + | chr3.3:70965576-70965595 | MS.gene75639:CDS | 45.0% | |
| TCATACACAAAAGGGACGGA+GGG | - | chr3.3:70963598-70963617 | None:intergenic | 45.0% | |
| TCTCACAAGACTTGCAGCTT+TGG | + | chr3.3:70965599-70965618 | MS.gene75639:CDS | 45.0% | |
| TCTGAAAACATCCCTTGACC+AGG | + | chr3.3:70966017-70966036 | MS.gene75639:CDS | 45.0% | |
| TGAAGATGAGAGGAAGGACA+TGG | - | chr3.3:70960941-70960960 | None:intergenic | 45.0% | |
| TGACGACTCCTTTCCTATTC+AGG | + | chr3.3:70965465-70965484 | MS.gene75639:intron | 45.0% | |
| TGTGTTGTATTTGCCAACGG+GGG | + | chr3.3:70961452-70961471 | MS.gene75639:intron | 45.0% | |
| TTGTCGTGTCCGTACTTCAT+AGG | - | chr3.3:70961484-70961503 | None:intergenic | 45.0% | |
| TTTGATGCCTTCCTGGTCAA+GGG | - | chr3.3:70966031-70966050 | None:intergenic | 45.0% | |
| ! | CCGAGTTTCATTTTGCAGGA+TGG | + | chr3.3:70963951-70963970 | MS.gene75639:intron | 45.0% |
| ! | CTTGTTTGGAACTCCGACAT+TGG | + | chr3.3:70961665-70961684 | MS.gene75639:intron | 45.0% |
| ! | TTGCCTTTTTGATGCCTTCC+TGG | - | chr3.3:70966038-70966057 | None:intergenic | 45.0% |
| ! | TTTTATGCCGAAGCTTCAGC+TGG | - | chr3.3:70962408-70962427 | None:intergenic | 45.0% |
| ! | TTTTGATGCCTTCCTGGTCA+AGG | - | chr3.3:70966032-70966051 | None:intergenic | 45.0% |
| !! | ACGAAGAGCATCATGAGAGT+CGG | - | chr3.3:70961166-70961185 | None:intergenic | 45.0% |
| !! | AGGGTTGAGGGTTTTAATGC+TGG | + | chr3.3:70961891-70961910 | MS.gene75639:CDS | 45.0% |
| !! | CAACCATCTCCTTAGCTTGT+AGG | - | chr3.3:70964726-70964745 | None:intergenic | 45.0% |
| !! | GATGGTGGAATCTCGGTATT+AGG | + | chr3.3:70964464-70964483 | MS.gene75639:intron | 45.0% |
| !! | GTAACTTGCGAGGGCATTTA+GGG | - | chr3.3:70961017-70961036 | None:intergenic | 45.0% |
| !! | GTTGAGGGTTTTAATGCTGG+AGG | + | chr3.3:70961894-70961913 | MS.gene75639:CDS | 45.0% |
| !! | TGACCAGGAAGGCATCAAAA+AGG | + | chr3.3:70966032-70966051 | MS.gene75639:CDS | 45.0% |
| !! | TTGTCCAGAGTTTCTAGCAG+TGG | - | chr3.3:70963531-70963550 | None:intergenic | 45.0% |
| !! | ATATATTCATAAATATAAAA+AGG | - | chr3.3:70965935-70965954 | None:intergenic | 5.0% |
| AACCTGGATGGATCACACAC+AGG | - | chr3.3:70965986-70966005 | None:intergenic | 50.0% | |
| AGACATCCTTGATTGCTGCG+CGG | + | chr3.3:70964365-70964384 | MS.gene75639:intron | 50.0% | |
| AGAGAAGCCGCAAATAGGGT+TGG | - | chr3.3:70962375-70962394 | None:intergenic | 50.0% | |
| AGTGTCCGTGCTTCATAGGT+TGG | + | chr3.3:70961618-70961637 | MS.gene75639:intron | 50.0% | |
| ATCCTGTGTGTGATCCATCC+AGG | + | chr3.3:70965981-70966000 | MS.gene75639:intron | 50.0% | |
| ATGATGCTCTTCGTCAAGCC+AGG | + | chr3.3:70961172-70961191 | MS.gene75639:CDS | 50.0% | |
| CACGTCTGTGTGAATATGCG+GGG | + | chr3.3:70963864-70963883 | MS.gene75639:intron | 50.0% | |
| CGATGCAAGAATCAGTCGTC+AGG | + | chr3.3:70965558-70965577 | MS.gene75639:CDS | 50.0% | |
| GAGTAGTGTCCGTGCTTCAT+AGG | + | chr3.3:70961614-70961633 | MS.gene75639:intron | 50.0% | |
| GCTATCTTCTCTGCAACCCT+AGG | + | chr3.3:70960904-70960923 | MS.gene75639:CDS | 50.0% | |
| GTAAACCTTTGGTCCATGGG+AGG | - | chr3.3:70965717-70965736 | None:intergenic | 50.0% | |
| GTGACATCACAGAATGCTGC+AGG | + | chr3.3:70962914-70962933 | MS.gene75639:intron | 50.0% | |
| TCTGCAACCCTAGGTTCCTT+CGG | + | chr3.3:70960913-70960932 | MS.gene75639:CDS | 50.0% | |
| TGATGCTCTTCGTCAAGCCA+GGG | + | chr3.3:70961173-70961192 | MS.gene75639:CDS | 50.0% | |
| TGTGTGATCCATCCAGGTTC+AGG | + | chr3.3:70965987-70966006 | MS.gene75639:intron | 50.0% | |
| TTGTATTTGCCAACGGGGGT+TGG | + | chr3.3:70961456-70961475 | MS.gene75639:intron | 50.0% | |
| TTTACTCTCCTTGCTCGAGC+TGG | + | chr3.3:70965732-70965751 | MS.gene75639:CDS | 50.0% | |
| ! | AAGGTGGTGGTAACTTGCGA+GGG | - | chr3.3:70961026-70961045 | None:intergenic | 50.0% |
| ! | AGCAAGAGTCGGTTCTGTTG+AGG | + | chr3.3:70962789-70962808 | MS.gene75639:CDS | 50.0% |
| ! | GATGATGACGATAGTGCCAC+TGG | - | chr3.3:70961050-70961069 | None:intergenic | 50.0% |
| ! | GGGTTGGCACCTATGAAGTA+CGG | + | chr3.3:70961472-70961491 | MS.gene75639:intron | 50.0% |
| ! | GTCGGTTCTGTTGAGGACTA+TGG | + | chr3.3:70962796-70962815 | MS.gene75639:CDS | 50.0% |
| ! | TACTCGGATTAGGCGTATCC+CGG | - | chr3.3:70961599-70961618 | None:intergenic | 50.0% |
| ! | TCAAGTATTGTCTCCAGCCC+CGG | - | chr3.3:70964032-70964051 | None:intergenic | 50.0% |
| ! | TTTTAATGCTGGAGGCCTGC+TGG | + | chr3.3:70961902-70961921 | MS.gene75639:CDS | 50.0% |
| !! | CGAAGAGCATCATGAGAGTC+GGG | - | chr3.3:70961165-70961184 | None:intergenic | 50.0% |
| !! | GGTAACTTGCGAGGGCATTT+AGG | - | chr3.3:70961018-70961037 | None:intergenic | 50.0% |
| AAACCGTATGGGGCAAGGGA+TGG | - | chr3.3:70964138-70964157 | None:intergenic | 55.0% | |
| ACACGACACTTGTCCGACAC+CGG | + | chr3.3:70961577-70961596 | MS.gene75639:intron | 55.0% | |
| AGCCCCGTGCATTCATGTCA+AGG | + | chr3.3:70961969-70961988 | MS.gene75639:CDS | 55.0% | |
| AGTTACCACCACCTTGCCAG+TGG | + | chr3.3:70961031-70961050 | MS.gene75639:CDS | 55.0% | |
| ATTGTCTCCAGCCCCGGTAA+GGG | - | chr3.3:70964026-70964045 | None:intergenic | 55.0% | |
| CATCCATCCCTTGCCCCATA+CGG | + | chr3.3:70964132-70964151 | MS.gene75639:intron | 55.0% | |
| CATGAGAGTCGGGAGCAGAA+GGG | - | chr3.3:70961155-70961174 | None:intergenic | 55.0% | |
| CTAATCCCGCGCAGCAATCA+AGG | - | chr3.3:70964374-70964393 | None:intergenic | 55.0% | |
| GACATCCTTGATTGCTGCGC+GGG | + | chr3.3:70964366-70964385 | MS.gene75639:intron | 55.0% | |
| GATTAGGCGTATCCCGGTGT+CGG | - | chr3.3:70961593-70961612 | None:intergenic | 55.0% | |
| GCACGGACACTACTCGGATT+AGG | - | chr3.3:70961609-70961628 | None:intergenic | 55.0% | |
| GGGACCCCAACATCATGAAG+TGG | - | chr3.3:70965867-70965886 | None:intergenic | 55.0% | |
| GTTCATCTGCGCTTCCCTGA+CGG | + | chr3.3:70962826-70962845 | MS.gene75639:CDS | 55.0% | |
| TATTGTCTCCAGCCCCGGTA+AGG | - | chr3.3:70964027-70964046 | None:intergenic | 55.0% | |
| TCATGAGAGTCGGGAGCAGA+AGG | - | chr3.3:70961156-70961175 | None:intergenic | 55.0% | |
| ! | ACATGGCACCGAAGGAACCT+AGG | - | chr3.3:70960924-70960943 | None:intergenic | 55.0% |
| ! | AGTCGCATCGATCCCTTACC+GGG | + | chr3.3:70964011-70964030 | MS.gene75639:CDS | 55.0% |
| ! | CAAGGTGGTGGTAACTTGCG+AGG | - | chr3.3:70961027-70961046 | None:intergenic | 55.0% |
| ! | CAGTCGCATCGATCCCTTAC+CGG | + | chr3.3:70964010-70964029 | MS.gene75639:CDS | 55.0% |
| ! | CATGGCACCGAAGGAACCTA+GGG | - | chr3.3:70960923-70960942 | None:intergenic | 55.0% |
| ! | GATTGCTGCGCGGGATTAGT+AGG | + | chr3.3:70964375-70964394 | MS.gene75639:intron | 55.0% |
| ! | TGACGATAGTGCCACTGGCA+AGG | - | chr3.3:70961045-70961064 | None:intergenic | 55.0% |
| ACGGGGCTCAGCTGTGAGAA+CGG | - | chr3.3:70961957-70961976 | None:intergenic | 60.0% | |
| AGGCACCTCCCATGGACCAA+AGG | + | chr3.3:70965709-70965728 | MS.gene75639:intron | 60.0% | |
| CACGACACTTGTCCGACACC+GGG | + | chr3.3:70961578-70961597 | MS.gene75639:intron | 60.0% | |
| CCTGTCTTCCAGCTCGAGCA+AGG | - | chr3.3:70965743-70965762 | None:intergenic | 60.0% | |
| CCTTGCTCGAGCTGGAAGAC+AGG | + | chr3.3:70965740-70965759 | MS.gene75639:CDS | 60.0% | |
| TCATAGGTGCCAACCCCCGT+TGG | - | chr3.3:70961468-70961487 | None:intergenic | 60.0% | |
| ! | ATGCTGGAGGCCTGCTGGTT+CGG | + | chr3.3:70961907-70961926 | MS.gene75639:CDS | 60.0% |
| ! | CGATAGTGCCACTGGCAAGG+TGG | - | chr3.3:70961042-70961061 | None:intergenic | 60.0% |
| ! | GAGGAAGGACATGGCACCGA+AGG | - | chr3.3:70960932-70960951 | None:intergenic | 60.0% |
| ! | GTCGCATCGATCCCTTACCG+GGG | + | chr3.3:70964012-70964031 | MS.gene75639:CDS | 60.0% |
| ! | TAGTGCCACTGGCAAGGTGG+TGG | - | chr3.3:70961039-70961058 | None:intergenic | 60.0% |
| !! | TTGGTCCATGGGAGGTGCCT+GGG | - | chr3.3:70965709-70965728 | None:intergenic | 60.0% |
| !! | TTTGGTCCATGGGAGGTGCC+TGG | - | chr3.3:70965710-70965729 | None:intergenic | 60.0% |
| CATCGATCCCTTACCGGGGC+TGG | + | chr3.3:70964016-70964035 | MS.gene75639:CDS | 65.0% | |
| CGGGGCTCAGCTGTGAGAAC+GGG | - | chr3.3:70961956-70961975 | None:intergenic | 65.0% | |
| GTCATCCCAGGCACCTCCCA+TGG | + | chr3.3:70965701-70965720 | MS.gene75639:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 70960901 | 70966086 | 70960901 | ID=MS.gene75639 |
| chr3.3 | mRNA | 70960901 | 70966086 | 70960901 | ID=MS.gene75639.t1;Parent=MS.gene75639 |
| chr3.3 | exon | 70960901 | 70961194 | 70960901 | ID=MS.gene75639.t1.exon1;Parent=MS.gene75639.t1 |
| chr3.3 | CDS | 70960901 | 70961194 | 70960901 | ID=cds.MS.gene75639.t1;Parent=MS.gene75639.t1 |
| chr3.3 | exon | 70961831 | 70961990 | 70961831 | ID=MS.gene75639.t1.exon2;Parent=MS.gene75639.t1 |
| chr3.3 | CDS | 70961831 | 70961990 | 70961831 | ID=cds.MS.gene75639.t1;Parent=MS.gene75639.t1 |
| chr3.3 | exon | 70962265 | 70962326 | 70962265 | ID=MS.gene75639.t1.exon3;Parent=MS.gene75639.t1 |
| chr3.3 | CDS | 70962265 | 70962326 | 70962265 | ID=cds.MS.gene75639.t1;Parent=MS.gene75639.t1 |
| chr3.3 | exon | 70962688 | 70962847 | 70962688 | ID=MS.gene75639.t1.exon4;Parent=MS.gene75639.t1 |
| chr3.3 | CDS | 70962688 | 70962847 | 70962688 | ID=cds.MS.gene75639.t1;Parent=MS.gene75639.t1 |
| chr3.3 | exon | 70962936 | 70963056 | 70962936 | ID=MS.gene75639.t1.exon5;Parent=MS.gene75639.t1 |
| chr3.3 | CDS | 70962936 | 70963056 | 70962936 | ID=cds.MS.gene75639.t1;Parent=MS.gene75639.t1 |
| chr3.3 | exon | 70963482 | 70963563 | 70963482 | ID=MS.gene75639.t1.exon6;Parent=MS.gene75639.t1 |
| chr3.3 | CDS | 70963482 | 70963563 | 70963482 | ID=cds.MS.gene75639.t1;Parent=MS.gene75639.t1 |
| chr3.3 | exon | 70963969 | 70964072 | 70963969 | ID=MS.gene75639.t1.exon7;Parent=MS.gene75639.t1 |
| chr3.3 | CDS | 70963969 | 70964072 | 70963969 | ID=cds.MS.gene75639.t1;Parent=MS.gene75639.t1 |
| chr3.3 | exon | 70965552 | 70965630 | 70965552 | ID=MS.gene75639.t1.exon8;Parent=MS.gene75639.t1 |
| chr3.3 | CDS | 70965552 | 70965630 | 70965552 | ID=cds.MS.gene75639.t1;Parent=MS.gene75639.t1 |
| chr3.3 | exon | 70965711 | 70965761 | 70965711 | ID=MS.gene75639.t1.exon9;Parent=MS.gene75639.t1 |
| chr3.3 | CDS | 70965711 | 70965761 | 70965711 | ID=cds.MS.gene75639.t1;Parent=MS.gene75639.t1 |
| chr3.3 | exon | 70966003 | 70966086 | 70966003 | ID=MS.gene75639.t1.exon10;Parent=MS.gene75639.t1 |
| chr3.3 | CDS | 70966003 | 70966086 | 70966003 | ID=cds.MS.gene75639.t1;Parent=MS.gene75639.t1 |
| Gene Sequence |
| Protein sequence |
