Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80966.t1 | XP_013447451.1 | 93.9 | 181 | 11 | 0 | 1 | 181 | 1 | 181 | 1.90E-94 | 355.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80966.t1 | P07689 | 86.0 | 179 | 25 | 0 | 3 | 181 | 2 | 180 | 1.9e-87 | 323.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80966.t1 | A0A072U6Q1 | 93.9 | 181 | 11 | 0 | 1 | 181 | 1 | 181 | 1.4e-94 | 355.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene80966 | 0.916586 | 1.49E-85 | -1.69E-46 |
| MS.gene049173 | MS.gene80966 | 0.885073 | 1.11E-71 | -1.69E-46 |
| MS.gene049217 | MS.gene80966 | 0.876488 | 1.34E-68 | -1.69E-46 |
| MS.gene049222 | MS.gene80966 | 0.890467 | 9.60E-74 | -1.69E-46 |
| MS.gene049232 | MS.gene80966 | 0.874181 | 8.26E-68 | -1.69E-46 |
| MS.gene049281 | MS.gene80966 | -0.802844 | 4.63E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene80966 | 0.951482 | 1.86E-109 | -1.69E-46 |
| MS.gene049320 | MS.gene80966 | 0.939814 | 6.75E-100 | -1.69E-46 |
| MS.gene04939 | MS.gene80966 | 0.816092 | 6.61E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene80966 | 0.872251 | 3.67E-67 | -1.69E-46 |
| MS.gene049627 | MS.gene80966 | 0.808968 | 2.39E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene80966 | 0.861395 | 1.06E-63 | -1.69E-46 |
| MS.gene049805 | MS.gene80966 | 0.838562 | 2.67E-57 | -1.69E-46 |
| MS.gene05010 | MS.gene80966 | 0.893862 | 4.23E-75 | -1.69E-46 |
| MS.gene050163 | MS.gene80966 | 0.911226 | 7.72E-83 | -1.69E-46 |
| MS.gene050165 | MS.gene80966 | 0.91259 | 1.64E-83 | -1.69E-46 |
| MS.gene050170 | MS.gene80966 | 0.833521 | 5.08E-56 | -1.69E-46 |
| MS.gene050216 | MS.gene80966 | 0.83819 | 3.33E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene80966 | 0.868725 | 5.27E-66 | -1.69E-46 |
| MS.gene050333 | MS.gene80966 | 0.919641 | 3.49E-87 | -1.69E-46 |
| MS.gene050444 | MS.gene80966 | 0.834264 | 3.31E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene80966 | 0.864461 | 1.20E-64 | -1.69E-46 |
| MS.gene050504 | MS.gene80966 | 0.915105 | 8.74E-85 | -1.69E-46 |
| MS.gene050518 | MS.gene80966 | 0.911313 | 7.00E-83 | -1.69E-46 |
| MS.gene050577 | MS.gene80966 | 0.86834 | 7.02E-66 | -1.69E-46 |
| MS.gene050593 | MS.gene80966 | 0.823587 | 1.28E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene80966 | 0.92477 | 4.52E-90 | -1.69E-46 |
| MS.gene050662 | MS.gene80966 | 0.83583 | 1.34E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene80966 | 0.896316 | 4.15E-76 | -1.69E-46 |
| MS.gene050686 | MS.gene80966 | 0.820443 | 6.84E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene80966 | 0.919839 | 2.72E-87 | -1.69E-46 |
| MS.gene050747 | MS.gene80966 | 0.845401 | 4.16E-59 | -1.69E-46 |
| MS.gene050767 | MS.gene80966 | 0.81041 | 1.17E-50 | -1.69E-46 |
| MS.gene050770 | MS.gene80966 | 0.813743 | 2.19E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene80966 | 0.925873 | 1.02E-90 | -1.69E-46 |
| MS.gene05080 | MS.gene80966 | 0.85625 | 3.65E-62 | -1.69E-46 |
| MS.gene050868 | MS.gene80966 | 0.846675 | 1.87E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene80966 | 0.842105 | 3.17E-58 | -1.69E-46 |
| MS.gene050876 | MS.gene80966 | 0.849637 | 2.85E-60 | -1.69E-46 |
| MS.gene050904 | MS.gene80966 | 0.817116 | 3.90E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene80966 | 0.839926 | 1.18E-57 | -1.69E-46 |
| MS.gene050986 | MS.gene80966 | 0.908841 | 1.10E-81 | -1.69E-46 |
| MS.gene05100 | MS.gene80966 | 0.89112 | 5.31E-74 | -1.69E-46 |
| MS.gene051228 | MS.gene80966 | 0.850982 | 1.19E-60 | -1.69E-46 |
| MS.gene051268 | MS.gene80966 | 0.800847 | 1.19E-48 | -1.69E-46 |
| MS.gene051317 | MS.gene80966 | 0.845466 | 3.99E-59 | -1.69E-46 |
| MS.gene051364 | MS.gene80966 | -0.814523 | 1.48E-51 | -1.69E-46 |
| MS.gene051366 | MS.gene80966 | -0.822557 | 2.22E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene80966 | 0.886919 | 2.25E-72 | -1.69E-46 |
| MS.gene051666 | MS.gene80966 | 0.828042 | 1.12E-54 | -1.69E-46 |
| MS.gene051694 | MS.gene80966 | 0.806795 | 6.92E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene80966 | 0.902148 | 1.30E-78 | -1.69E-46 |
| MS.gene051858 | MS.gene80966 | 0.847568 | 1.06E-59 | -1.69E-46 |
| MS.gene051874 | MS.gene80966 | 0.801384 | 9.24E-49 | -1.69E-46 |
| MS.gene051949 | MS.gene80966 | 0.88229 | 1.18E-70 | -1.69E-46 |
| MS.gene052164 | MS.gene80966 | 0.857396 | 1.68E-62 | -1.69E-46 |
| MS.gene052271 | MS.gene80966 | 0.888746 | 4.49E-73 | -1.69E-46 |
| MS.gene052379 | MS.gene80966 | 0.820808 | 5.64E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene80966 | 0.853309 | 2.60E-61 | -1.69E-46 |
| MS.gene052486 | MS.gene80966 | 0.859 | 5.60E-63 | -1.69E-46 |
| MS.gene052503 | MS.gene80966 | 0.845821 | 3.20E-59 | -1.69E-46 |
| MS.gene052504 | MS.gene80966 | 0.823488 | 1.35E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene80966 | 0.863556 | 2.29E-64 | -1.69E-46 |
| MS.gene052615 | MS.gene80966 | 0.84647 | 2.13E-59 | -1.69E-46 |
| MS.gene052822 | MS.gene80966 | 0.885383 | 8.53E-72 | -1.69E-46 |
| MS.gene052823 | MS.gene80966 | 0.83444 | 2.99E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene80966 | 0.828588 | 8.27E-55 | -1.69E-46 |
| MS.gene052870 | MS.gene80966 | 0.810028 | 1.41E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene80966 | 0.82771 | 1.35E-54 | -1.69E-46 |
| MS.gene052916 | MS.gene80966 | 0.896163 | 4.80E-76 | -1.69E-46 |
| MS.gene052966 | MS.gene80966 | 0.842344 | 2.74E-58 | -1.69E-46 |
| MS.gene053009 | MS.gene80966 | 0.825104 | 5.62E-54 | -1.69E-46 |
| MS.gene053018 | MS.gene80966 | 0.800327 | 1.52E-48 | -1.69E-46 |
| MS.gene053104 | MS.gene80966 | 0.820337 | 7.23E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene80966 | 0.856554 | 2.97E-62 | -1.69E-46 |
| MS.gene053207 | MS.gene80966 | 0.84618 | 2.55E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene80966 | 0.912402 | 2.03E-83 | -1.69E-46 |
| MS.gene053286 | MS.gene80966 | 0.911738 | 4.33E-83 | -1.69E-46 |
| MS.gene053322 | MS.gene80966 | 0.831687 | 1.45E-55 | -1.69E-46 |
| MS.gene053436 | MS.gene80966 | 0.834237 | 3.37E-56 | -1.69E-46 |
| MS.gene053479 | MS.gene80966 | 0.809288 | 2.04E-50 | -1.69E-46 |
| MS.gene053480 | MS.gene80966 | 0.810514 | 1.11E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene80966 | -0.810324 | 1.22E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene80966 | 0.879366 | 1.32E-69 | -1.69E-46 |
| MS.gene053626 | MS.gene80966 | 0.807559 | 4.76E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene80966 | 0.885534 | 7.49E-72 | -1.69E-46 |
| MS.gene053824 | MS.gene80966 | 0.861504 | 9.80E-64 | -1.69E-46 |
| MS.gene053916 | MS.gene80966 | 0.877668 | 5.22E-69 | -1.69E-46 |
| MS.gene054408 | MS.gene80966 | 0.817019 | 4.10E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene80966 | 0.846213 | 2.50E-59 | -1.69E-46 |
| MS.gene054600 | MS.gene80966 | 0.887633 | 1.20E-72 | -1.69E-46 |
| MS.gene054642 | MS.gene80966 | 0.945426 | 3.12E-104 | -1.69E-46 |
| MS.gene05470 | MS.gene80966 | 0.843232 | 1.59E-58 | -1.69E-46 |
| MS.gene054954 | MS.gene80966 | 0.944102 | 3.61E-103 | -1.69E-46 |
| MS.gene054959 | MS.gene80966 | -0.806486 | 8.04E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene80966 | 0.83104 | 2.09E-55 | -1.69E-46 |
| MS.gene055154 | MS.gene80966 | -0.821474 | 3.96E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene80966 | 0.838325 | 3.08E-57 | -1.69E-46 |
| MS.gene055212 | MS.gene80966 | 0.858629 | 7.22E-63 | -1.69E-46 |
| MS.gene055224 | MS.gene80966 | 0.817771 | 2.77E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene80966 | 0.80156 | 8.50E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene80966 | 0.942278 | 9.53E-102 | -1.69E-46 |
| MS.gene055397 | MS.gene80966 | 0.823955 | 1.05E-53 | -1.69E-46 |
| MS.gene055499 | MS.gene80966 | 0.814304 | 1.65E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene80966 | 0.911628 | 4.91E-83 | -1.69E-46 |
| MS.gene055577 | MS.gene80966 | 0.881982 | 1.53E-70 | -1.69E-46 |
| MS.gene055634 | MS.gene80966 | 0.867251 | 1.57E-65 | -1.69E-46 |
| MS.gene055636 | MS.gene80966 | 0.850026 | 2.22E-60 | -1.69E-46 |
| MS.gene055638 | MS.gene80966 | 0.875805 | 2.31E-68 | -1.69E-46 |
| MS.gene055647 | MS.gene80966 | 0.840258 | 9.69E-58 | -1.69E-46 |
| MS.gene055722 | MS.gene80966 | 0.893761 | 4.65E-75 | -1.69E-46 |
| MS.gene055748 | MS.gene80966 | 0.866516 | 2.69E-65 | -1.69E-46 |
| MS.gene055750 | MS.gene80966 | 0.867867 | 9.97E-66 | -1.69E-46 |
| MS.gene055751 | MS.gene80966 | 0.877129 | 8.05E-69 | -1.69E-46 |
| MS.gene055776 | MS.gene80966 | 0.899217 | 2.47E-77 | -1.69E-46 |
| MS.gene055849 | MS.gene80966 | 0.872786 | 2.43E-67 | -1.69E-46 |
| MS.gene05589 | MS.gene80966 | 0.846792 | 1.74E-59 | -1.69E-46 |
| MS.gene05592 | MS.gene80966 | 0.851091 | 1.11E-60 | -1.69E-46 |
| MS.gene055941 | MS.gene80966 | 0.847803 | 9.18E-60 | -1.69E-46 |
| MS.gene055942 | MS.gene80966 | -0.835398 | 1.72E-56 | -1.69E-46 |
| MS.gene055956 | MS.gene80966 | -0.846549 | 2.03E-59 | -1.69E-46 |
| MS.gene056046 | MS.gene80966 | 0.837686 | 4.49E-57 | -1.69E-46 |
| MS.gene056083 | MS.gene80966 | 0.848673 | 5.28E-60 | -1.69E-46 |
| MS.gene056374 | MS.gene80966 | 0.887441 | 1.42E-72 | -1.69E-46 |
| MS.gene056409 | MS.gene80966 | 0.81251 | 4.09E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene80966 | 0.806922 | 6.50E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene80966 | 0.900822 | 4.99E-78 | -1.69E-46 |
| MS.gene056510 | MS.gene80966 | 0.907259 | 6.15E-81 | -1.69E-46 |
| MS.gene056549 | MS.gene80966 | 0.82098 | 5.15E-53 | -1.69E-46 |
| MS.gene056610 | MS.gene80966 | 0.811018 | 8.64E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene80966 | 0.946271 | 6.34E-105 | -1.69E-46 |
| MS.gene056692 | MS.gene80966 | 0.868956 | 4.44E-66 | -1.69E-46 |
| MS.gene056761 | MS.gene80966 | -0.824694 | 7.03E-54 | -1.69E-46 |
| MS.gene056878 | MS.gene80966 | 0.807585 | 4.71E-50 | -1.69E-46 |
| MS.gene056898 | MS.gene80966 | 0.842391 | 2.66E-58 | -1.69E-46 |
| MS.gene057076 | MS.gene80966 | 0.852097 | 5.77E-61 | -1.69E-46 |
| MS.gene057129 | MS.gene80966 | 0.861642 | 8.89E-64 | -1.69E-46 |
| MS.gene057148 | MS.gene80966 | 0.805268 | 1.45E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene80966 | 0.860071 | 2.67E-63 | -1.69E-46 |
| MS.gene057416 | MS.gene80966 | 0.885139 | 1.05E-71 | -1.69E-46 |
| MS.gene057658 | MS.gene80966 | 0.807714 | 4.42E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene80966 | 0.846945 | 1.58E-59 | -1.69E-46 |
| MS.gene057926 | MS.gene80966 | 0.828112 | 1.08E-54 | -1.69E-46 |
| MS.gene058019 | MS.gene80966 | 0.838298 | 3.13E-57 | -1.69E-46 |
| MS.gene058323 | MS.gene80966 | 0.800945 | 1.14E-48 | -1.69E-46 |
| MS.gene058334 | MS.gene80966 | -0.826691 | 2.36E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene80966 | 0.832569 | 8.77E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene80966 | 0.830939 | 2.21E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene80966 | 0.944199 | 3.02E-103 | -1.69E-46 |
| MS.gene058544 | MS.gene80966 | 0.880018 | 7.75E-70 | -1.69E-46 |
| MS.gene058719 | MS.gene80966 | 0.807467 | 4.98E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene80966 | 0.899047 | 2.92E-77 | -1.69E-46 |
| MS.gene058773 | MS.gene80966 | 0.90902 | 9.03E-82 | -1.69E-46 |
| MS.gene058838 | MS.gene80966 | 0.848672 | 5.28E-60 | -1.69E-46 |
| MS.gene059022 | MS.gene80966 | 0.934556 | 3.36E-96 | -1.69E-46 |
| MS.gene059023 | MS.gene80966 | 0.884854 | 1.34E-71 | -1.69E-46 |
| MS.gene059029 | MS.gene80966 | 0.861474 | 1.00E-63 | -1.69E-46 |
| MS.gene059079 | MS.gene80966 | 0.821461 | 3.99E-53 | -1.69E-46 |
| MS.gene05912 | MS.gene80966 | 0.806923 | 6.50E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene80966 | 0.873346 | 1.58E-67 | -1.69E-46 |
| MS.gene05934 | MS.gene80966 | 0.821868 | 3.21E-53 | -1.69E-46 |
| MS.gene059367 | MS.gene80966 | 0.809682 | 1.68E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene80966 | 0.808553 | 2.93E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene80966 | 0.942284 | 9.43E-102 | -1.69E-46 |
| MS.gene059718 | MS.gene80966 | 0.907827 | 3.32E-81 | -1.69E-46 |
| MS.gene059756 | MS.gene80966 | 0.868917 | 4.57E-66 | -1.69E-46 |
| MS.gene059801 | MS.gene80966 | 0.843046 | 1.78E-58 | -1.69E-46 |
| MS.gene059837 | MS.gene80966 | 0.821624 | 3.66E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene80966 | 0.904036 | 1.87E-79 | -1.69E-46 |
| MS.gene059902 | MS.gene80966 | 0.84247 | 2.54E-58 | -1.69E-46 |
| MS.gene059960 | MS.gene80966 | 0.822118 | 2.81E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene80966 | 0.805364 | 1.38E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene80966 | 0.812396 | 4.33E-51 | -1.69E-46 |
| MS.gene060337 | MS.gene80966 | -0.859216 | 4.82E-63 | -1.69E-46 |
| MS.gene060341 | MS.gene80966 | 0.838252 | 3.21E-57 | -1.69E-46 |
| MS.gene060482 | MS.gene80966 | 0.852569 | 4.24E-61 | -1.69E-46 |
| MS.gene060526 | MS.gene80966 | 0.814673 | 1.37E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene80966 | 0.912841 | 1.23E-83 | -1.69E-46 |
| MS.gene060727 | MS.gene80966 | 0.808279 | 3.35E-50 | -1.69E-46 |
| MS.gene060728 | MS.gene80966 | 0.832336 | 1.00E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene80966 | 0.884859 | 1.34E-71 | -1.69E-46 |
| MS.gene060778 | MS.gene80966 | 0.832002 | 1.21E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene80966 | 0.882461 | 1.02E-70 | -1.69E-46 |
| MS.gene060804 | MS.gene80966 | 0.818463 | 1.93E-52 | -1.69E-46 |
| MS.gene060818 | MS.gene80966 | 0.804274 | 2.34E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene80966 | 0.824195 | 9.21E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene80966 | 0.844242 | 8.53E-59 | -1.69E-46 |
| MS.gene060982 | MS.gene80966 | 0.890897 | 6.50E-74 | -1.69E-46 |
| MS.gene061041 | MS.gene80966 | 0.804332 | 2.27E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene80966 | 0.801359 | 9.35E-49 | -1.69E-46 |
| MS.gene061134 | MS.gene80966 | 0.815938 | 7.15E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene80966 | 0.891845 | 2.74E-74 | -1.69E-46 |
| MS.gene061171 | MS.gene80966 | 0.81641 | 5.61E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene80966 | 0.853345 | 2.54E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene80966 | MS.gene074568 | PPI |
| MS.gene80966 | MS.gene80971 | PPI |
| MS.gene80966 | MS.gene074566 | PPI |
| MS.gene80966 | MS.gene92220 | PPI |
| MS.gene80966 | MS.gene074249 | PPI |
| MS.gene80966 | MS.gene074247 | PPI |
| MS.gene80966 | MS.gene92217 | PPI |
| MS.gene80966 | MS.gene54465 | PPI |
| MS.gene80966 | MS.gene92216 | PPI |
| MS.gene80966 | MS.gene76905 | PPI |
| MS.gene80966 | MS.gene074248 | PPI |
| MS.gene80966 | MS.gene92218 | PPI |
| MS.gene80966 | MS.gene76908 | PPI |
| MS.gene80966 | MS.gene54468 | PPI |
| MS.gene80966 | MS.gene074567 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80966.t1 | MTR_7g007120 | 94.737 | 171 | 9 | 0 | 11 | 181 | 11 | 181 | 1.78e-124 | 348 |
| MS.gene80966.t1 | MTR_7g007200 | 94.152 | 171 | 10 | 0 | 11 | 181 | 11 | 181 | 3.33e-124 | 347 |
| MS.gene80966.t1 | MTR_7g007220 | 94.737 | 171 | 9 | 0 | 11 | 181 | 11 | 181 | 3.36e-124 | 347 |
| MS.gene80966.t1 | MTR_7g007120 | 94.706 | 170 | 9 | 0 | 12 | 181 | 12 | 181 | 7.25e-124 | 347 |
| MS.gene80966.t1 | MTR_7g007120 | 94.152 | 171 | 10 | 0 | 11 | 181 | 11 | 181 | 9.54e-124 | 346 |
| MS.gene80966.t1 | MTR_7g007230 | 92.941 | 170 | 12 | 0 | 12 | 181 | 12 | 181 | 5.30e-121 | 339 |
| MS.gene80966.t1 | MTR_6g018310 | 85.475 | 179 | 25 | 1 | 4 | 181 | 2 | 180 | 4.00e-115 | 324 |
| MS.gene80966.t1 | MTR_6g018300 | 84.916 | 179 | 23 | 2 | 4 | 181 | 2 | 177 | 2.84e-112 | 317 |
| MS.gene80966.t1 | MTR_7g007210 | 94.805 | 154 | 8 | 0 | 11 | 164 | 11 | 164 | 2.48e-110 | 313 |
| MS.gene80966.t1 | MTR_4g127870 | 50.641 | 156 | 73 | 3 | 28 | 180 | 15 | 169 | 1.09e-57 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80966.t1 | AT1G67090 | 71.429 | 182 | 47 | 2 | 1 | 181 | 1 | 178 | 6.50e-94 | 271 |
| MS.gene80966.t1 | AT5G38430 | 70.879 | 182 | 48 | 2 | 1 | 181 | 1 | 178 | 6.15e-93 | 268 |
| MS.gene80966.t1 | AT5G38430 | 70.879 | 182 | 48 | 2 | 1 | 181 | 1 | 178 | 6.15e-93 | 268 |
| MS.gene80966.t1 | AT5G38410 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 1.30e-92 | 268 |
| MS.gene80966.t1 | AT5G38420 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 3.51e-92 | 266 |
| MS.gene80966.t1 | AT5G38410 | 68.449 | 187 | 49 | 3 | 1 | 181 | 1 | 183 | 2.53e-90 | 262 |
| MS.gene80966.t1 | AT5G38410 | 67.582 | 182 | 47 | 3 | 1 | 181 | 1 | 171 | 1.08e-85 | 249 |
| MS.gene80966.t1 | AT1G67090 | 65.217 | 115 | 35 | 2 | 1 | 114 | 1 | 111 | 1.01e-45 | 147 |
Find 55 sgRNAs with CRISPR-Local
Find 71 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGTTGATTACCTTATA+AGG | 0.266546 | 7.3:-90804514 | MS.gene80966:CDS |
| CAACCCATCCCTTCCTTATA+AGG | 0.273690 | 7.3:+90804501 | None:intergenic |
| TCCTTGTTGATCTTTGTAAC+TGG | 0.307724 | 7.3:+90804875 | None:intergenic |
| GGCGCGGTGGCTCCATTTGT+TGG | 0.347642 | 7.3:-90804920 | MS.gene80966:CDS |
| GAAGGGATGGGTTGCTTGCT+TGG | 0.368783 | 7.3:-90804492 | MS.gene80966:CDS |
| GATACTATGATGGACGTTAC+TGG | 0.371866 | 7.3:-90804291 | MS.gene80966:CDS |
| TTCTTTCGCCAATTGTTCTC+TGG | 0.378466 | 7.3:+90804532 | None:intergenic |
| CGATTCTTCTCAAGTGTTGA+AGG | 0.396980 | 7.3:-90804236 | MS.gene80966:CDS |
| TCTTCCACCATTGCTTGTAA+TGG | 0.401668 | 7.3:+90804844 | None:intergenic |
| GCCAATTGTTCTCTGGTCAA+TGG | 0.405140 | 7.3:+90804539 | None:intergenic |
| ACCATTGACCAGAGAACAAT+TGG | 0.409622 | 7.3:-90804540 | MS.gene80966:CDS |
| ATGTGGAAGTTGCCTTTGTT+TGG | 0.411503 | 7.3:-90804265 | MS.gene80966:CDS |
| ATATAGGTGTGGCCTCCTAT+TGG | 0.416991 | 7.3:-90804596 | MS.gene80966:intron |
| GTTGGACTCAAGTCCATGGC+TGG | 0.431505 | 7.3:-90804902 | MS.gene80966:CDS |
| TCAAACTTCTTCTTGCCAAT+AGG | 0.435101 | 7.3:+90804581 | None:intergenic |
| ATGATACGGACAAAGGCATC+AGG | 0.443523 | 7.3:+90804187 | None:intergenic |
| CTTCAACACTTGAGAAGAAT+CGG | 0.461194 | 7.3:+90804237 | None:intergenic |
| CGCGCCTCGTCGGTTCAATC+CGG | 0.461844 | 7.3:-90804941 | MS.gene80966:CDS |
| GATGCCTTTGTCCGTATCAT+CGG | 0.484184 | 7.3:-90804184 | MS.gene80966:CDS |
| CCTTGTTGATCTTTGTAACT+GGG | 0.505692 | 7.3:+90804876 | None:intergenic |
| ATTACCTTATAAGGAAGGGA+TGG | 0.507588 | 7.3:-90804505 | MS.gene80966:CDS |
| AACTTCTTCTTGCCAATAGG+AGG | 0.515017 | 7.3:+90804584 | None:intergenic |
| ATTTGTTGGACTCAAGTCCA+TGG | 0.520007 | 7.3:-90804906 | MS.gene80966:CDS |
| AGTTGATTACCTTATAAGGA+AGG | 0.522099 | 7.3:-90804510 | MS.gene80966:CDS |
| ATGGACTTGAGTCCAACAAA+TGG | 0.526746 | 7.3:+90804908 | None:intergenic |
| TCCACCATTGCTTGTAATGG+AGG | 0.530318 | 7.3:+90804847 | None:intergenic |
| CATAGTATCCTGGTGACTTG+TGG | 0.542155 | 7.3:+90804305 | None:intergenic |
| CGTGAGAACCACAAGTCACC+AGG | 0.544938 | 7.3:-90804313 | MS.gene80966:CDS |
| AACTGTAGTTACAGCTGAAG+AGG | 0.546956 | 7.3:+90804967 | None:intergenic |
| TTACCTTATAAGGAAGGGAT+GGG | 0.559428 | 7.3:-90804504 | MS.gene80966:CDS |
| AACAAATGGAGCCACCGCGC+CGG | 0.560979 | 7.3:+90804922 | None:intergenic |
| TACAGTTAACCGCGCCTCGT+CGG | 0.566785 | 7.3:-90804951 | MS.gene80966:CDS |
| GTTGATTACCTTATAAGGAA+GGG | 0.567383 | 7.3:-90804509 | MS.gene80966:CDS |
| CAATAAACTTAGTAGACTGC+AGG | 0.568140 | 7.3:+90804112 | None:intergenic |
| TAACGTCCATCATAGTATCC+TGG | 0.569613 | 7.3:+90804295 | None:intergenic |
| AAGTCACCAGGATACTATGA+TGG | 0.574009 | 7.3:-90804301 | MS.gene80966:CDS |
| CGGATTGAACCGACGAGGCG+CGG | 0.577823 | 7.3:+90804942 | None:intergenic |
| CGTTGTCGAATCCGATGATA+CGG | 0.579522 | 7.3:+90804173 | None:intergenic |
| CTGGTGACTTGTGGTTCTCA+CGG | 0.595328 | 7.3:+90804314 | None:intergenic |
| GAATCGGTTGCTCCAAACAA+AGG | 0.598394 | 7.3:+90804253 | None:intergenic |
| AATTGTTCTCTGGTCAATGG+TGG | 0.600961 | 7.3:+90804542 | None:intergenic |
| ATTACCTCCATTACAAGCAA+TGG | 0.601253 | 7.3:-90804851 | MS.gene80966:CDS |
| TTGCTTGGAATTTGAGACCG+AGG | 0.613015 | 7.3:-90804477 | MS.gene80966:intron |
| ACCTCCATTACAAGCAATGG+TGG | 0.613355 | 7.3:-90804848 | MS.gene80966:CDS |
| TGTAACTGGGAAGCCAGCCA+TGG | 0.615947 | 7.3:+90804889 | None:intergenic |
| GTTCTCTGGTCAATGGTGGA+AGG | 0.618328 | 7.3:+90804546 | None:intergenic |
| GTCGGTTCAATCCGGCGCGG+TGG | 0.622925 | 7.3:-90804933 | MS.gene80966:CDS |
| TGGAAGAGTAAACTGCATGC+AGG | 0.652563 | 7.3:-90804828 | MS.gene80966:intron |
| AGCTGAAGAGGAGATCATAG+AGG | 0.655372 | 7.3:+90804979 | None:intergenic |
| TGATACGGACAAAGGCATCA+GGG | 0.656050 | 7.3:+90804188 | None:intergenic |
| CCCAGTTACAAAGATCAACA+AGG | 0.670594 | 7.3:-90804876 | MS.gene80966:CDS |
| CGCGCCGGATTGAACCGACG+AGG | 0.686777 | 7.3:+90804937 | None:intergenic |
| GAATCCGATGATACGGACAA+AGG | 0.687909 | 7.3:+90804180 | None:intergenic |
| CTCGTCGGTTCAATCCGGCG+CGG | 0.728671 | 7.3:-90804936 | MS.gene80966:CDS |
| ATGGACGTTACTGGACAATG+TGG | 0.742197 | 7.3:-90804282 | MS.gene80966:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAACTTTGTACATTAT+TGG | - | chr7.3:90804355-90804374 | MS.gene80966:intron | 15.0% |
| !!! | ATAATGTACAAAGTTTTAAT+TGG | + | chr7.3:90804355-90804374 | None:intergenic | 15.0% |
| !! | AATGTACAAAAGATTAAGTT+AGG | + | chr7.3:90804484-90804503 | None:intergenic | 20.0% |
| !! | ATGTACAAAAGATTAAGTTA+GGG | + | chr7.3:90804483-90804502 | None:intergenic | 20.0% |
| !! | TTTGTACATTACTACTATAT+AGG | - | chr7.3:90804494-90804513 | MS.gene80966:CDS | 20.0% |
| !!! | GATTTCATGTTTTTTTCATA+AGG | - | chr7.3:90804400-90804419 | MS.gene80966:intron | 20.0% |
| ! | AATAACATTAATGGAGTCAT+TGG | - | chr7.3:90804436-90804455 | MS.gene80966:intron | 25.0% |
| ! | AGTAAATGAATATTAGACCT+CGG | + | chr7.3:90804649-90804668 | None:intergenic | 25.0% |
| ! | TGTACAAAAGATTAAGTTAG+GGG | + | chr7.3:90804482-90804501 | None:intergenic | 25.0% |
| !! | AAGAAGTTGATTACCTTATA+AGG | - | chr7.3:90804592-90804611 | MS.gene80966:CDS | 25.0% |
| !!! | TGTTTGTTTTGATTTGTACT+TGG | - | chr7.3:90804745-90804764 | MS.gene80966:intron | 25.0% |
| ACATTACTACTATATAGGTG+TGG | - | chr7.3:90804499-90804518 | MS.gene80966:CDS | 30.0% | |
| AGTTGATTACCTTATAAGGA+AGG | - | chr7.3:90804596-90804615 | MS.gene80966:intron | 30.0% | |
| GTTGATTACCTTATAAGGAA+GGG | - | chr7.3:90804597-90804616 | MS.gene80966:intron | 30.0% | |
| ! | GGGCTTAATAAAATTTTGCA+TGG | + | chr7.3:90804462-90804481 | None:intergenic | 30.0% |
| !! | ATATAATCGTTGTTTTGTCG+CGG | - | chr7.3:90804688-90804707 | MS.gene80966:intron | 30.0% |
| ATTACCTCCATTACAAGCAA+TGG | - | chr7.3:90804255-90804274 | MS.gene80966:CDS | 35.0% | |
| ATTACCTTATAAGGAAGGGA+TGG | - | chr7.3:90804601-90804620 | MS.gene80966:intron | 35.0% | |
| CCTTGTTGATCTTTGTAACT+GGG | + | chr7.3:90804233-90804252 | None:intergenic | 35.0% | |
| CTTCAACACTTGAGAAGAAT+CGG | + | chr7.3:90804872-90804891 | None:intergenic | 35.0% | |
| TCAAACTTCTTCTTGCCAAT+AGG | + | chr7.3:90804528-90804547 | None:intergenic | 35.0% | |
| TCCTTGTTGATCTTTGTAAC+TGG | + | chr7.3:90804234-90804253 | None:intergenic | 35.0% | |
| TTACCTTATAAGGAAGGGAT+GGG | - | chr7.3:90804602-90804621 | MS.gene80966:intron | 35.0% | |
| AACTGTAGTTACAGCTGAAG+AGG | + | chr7.3:90804142-90804161 | None:intergenic | 40.0% | |
| AACTTCTTCTTGCCAATAGG+AGG | + | chr7.3:90804525-90804544 | None:intergenic | 40.0% | |
| AAGTCACCAGGATACTATGA+TGG | - | chr7.3:90804805-90804824 | MS.gene80966:intron | 40.0% | |
| AATTGTTCTCTGGTCAATGG+TGG | + | chr7.3:90804567-90804586 | None:intergenic | 40.0% | |
| ACCATTGACCAGAGAACAAT+TGG | - | chr7.3:90804566-90804585 | MS.gene80966:CDS | 40.0% | |
| ATGGACTTGAGTCCAACAAA+TGG | + | chr7.3:90804201-90804220 | None:intergenic | 40.0% | |
| ATGTGGAAGTTGCCTTTGTT+TGG | - | chr7.3:90804841-90804860 | MS.gene80966:CDS | 40.0% | |
| CAAATTTGTGACTGTGACCT+TGG | + | chr7.3:90804714-90804733 | None:intergenic | 40.0% | |
| CCCAGTTACAAAGATCAACA+AGG | - | chr7.3:90804230-90804249 | MS.gene80966:CDS | 40.0% | |
| GTACTTGGTTACTTGCAGAA+AGG | - | chr7.3:90804760-90804779 | MS.gene80966:intron | 40.0% | |
| TAACGTCCATCATAGTATCC+TGG | + | chr7.3:90804814-90804833 | None:intergenic | 40.0% | |
| TCTTCCACCATTGCTTGTAA+TGG | + | chr7.3:90804265-90804284 | None:intergenic | 40.0% | |
| TTCTTTCGCCAATTGTTCTC+TGG | + | chr7.3:90804577-90804596 | None:intergenic | 40.0% | |
| ! | ATTTGTTGGACTCAAGTCCA+TGG | - | chr7.3:90804200-90804219 | MS.gene80966:CDS | 40.0% |
| !! | CGATTCTTCTCAAGTGTTGA+AGG | - | chr7.3:90804870-90804889 | MS.gene80966:CDS | 40.0% |
| !! | GATACTATGATGGACGTTAC+TGG | - | chr7.3:90804815-90804834 | MS.gene80966:intron | 40.0% |
| ACCTCCATTACAAGCAATGG+TGG | - | chr7.3:90804258-90804277 | MS.gene80966:CDS | 45.0% | |
| AGCTGAAGAGGAGATCATAG+AGG | + | chr7.3:90804130-90804149 | None:intergenic | 45.0% | |
| ATATAGGTGTGGCCTCCTAT+TGG | - | chr7.3:90804510-90804529 | MS.gene80966:CDS | 45.0% | |
| ATGGACGTTACTGGACAATG+TGG | - | chr7.3:90804824-90804843 | MS.gene80966:intron | 45.0% | |
| CAACCCATCCCTTCCTTATA+AGG | + | chr7.3:90804608-90804627 | None:intergenic | 45.0% | |
| CATAGTATCCTGGTGACTTG+TGG | + | chr7.3:90804804-90804823 | None:intergenic | 45.0% | |
| CGTTGTCGAATCCGATGATA+CGG | + | chr7.3:90804936-90804955 | None:intergenic | 45.0% | |
| GAATCCGATGATACGGACAA+AGG | + | chr7.3:90804929-90804948 | None:intergenic | 45.0% | |
| GAATCGGTTGCTCCAAACAA+AGG | + | chr7.3:90804856-90804875 | None:intergenic | 45.0% | |
| GATGCCTTTGTCCGTATCAT+CGG | - | chr7.3:90804922-90804941 | MS.gene80966:CDS | 45.0% | |
| GCCAATTGTTCTCTGGTCAA+TGG | + | chr7.3:90804570-90804589 | None:intergenic | 45.0% | |
| TCCACCATTGCTTGTAATGG+AGG | + | chr7.3:90804262-90804281 | None:intergenic | 45.0% | |
| TGGAAGAGTAAACTGCATGC+AGG | - | chr7.3:90804278-90804297 | MS.gene80966:CDS | 45.0% | |
| ! | TTGCTTGGAATTTGAGACCG+AGG | - | chr7.3:90804629-90804648 | MS.gene80966:intron | 45.0% |
| !! | ATGATACGGACAAAGGCATC+AGG | + | chr7.3:90804922-90804941 | None:intergenic | 45.0% |
| !! | TGATACGGACAAAGGCATCA+GGG | + | chr7.3:90804921-90804940 | None:intergenic | 45.0% |
| !! | TTAAATTTAAATAACATTAA+TGG | - | chr7.3:90804427-90804446 | MS.gene80966:intron | 5.0% |
| ! | CTGGTGACTTGTGGTTCTCA+CGG | + | chr7.3:90804795-90804814 | None:intergenic | 50.0% |
| ! | GTTCTCTGGTCAATGGTGGA+AGG | + | chr7.3:90804563-90804582 | None:intergenic | 50.0% |
| CGTGAGAACCACAAGTCACC+AGG | - | chr7.3:90804793-90804812 | MS.gene80966:intron | 55.0% | |
| GTTGGACTCAAGTCCATGGC+TGG | - | chr7.3:90804204-90804223 | MS.gene80966:CDS | 55.0% | |
| TACAGTTAACCGCGCCTCGT+CGG | - | chr7.3:90804155-90804174 | MS.gene80966:CDS | 55.0% | |
| TGTAACTGGGAAGCCAGCCA+TGG | + | chr7.3:90804220-90804239 | None:intergenic | 55.0% | |
| !! | GAAGGGATGGGTTGCTTGCT+TGG | - | chr7.3:90804614-90804633 | MS.gene80966:intron | 55.0% |
| !! | TCGTTGTTTTGTCGCGGCCA+AGG | - | chr7.3:90804694-90804713 | MS.gene80966:intron | 55.0% |
| AACAAATGGAGCCACCGCGC+CGG | + | chr7.3:90804187-90804206 | None:intergenic | 60.0% | |
| CGGATTGAACCGACGAGGCG+CGG | + | chr7.3:90804167-90804186 | None:intergenic | 65.0% | |
| GGCGCGGTGGCTCCATTTGT+TGG | - | chr7.3:90804186-90804205 | MS.gene80966:CDS | 65.0% | |
| !! | CGCGCCTCGTCGGTTCAATC+CGG | - | chr7.3:90804165-90804184 | MS.gene80966:CDS | 65.0% |
| !! | CTCGTCGGTTCAATCCGGCG+CGG | - | chr7.3:90804170-90804189 | MS.gene80966:CDS | 65.0% |
| CGCGCCGGATTGAACCGACG+AGG | + | chr7.3:90804172-90804191 | None:intergenic | 70.0% | |
| ! | GTCGGTTCAATCCGGCGCGG+TGG | - | chr7.3:90804173-90804192 | MS.gene80966:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 90804120 | 90805008 | 90804120 | ID=MS.gene80966 |
| chr7.3 | mRNA | 90804120 | 90805008 | 90804120 | ID=MS.gene80966.t1;Parent=MS.gene80966 |
| chr7.3 | exon | 90804829 | 90805008 | 90804829 | ID=MS.gene80966.t1.exon1;Parent=MS.gene80966.t1 |
| chr7.3 | CDS | 90804829 | 90805008 | 90804829 | ID=cds.MS.gene80966.t1;Parent=MS.gene80966.t1 |
| chr7.3 | exon | 90804478 | 90804612 | 90804478 | ID=MS.gene80966.t1.exon2;Parent=MS.gene80966.t1 |
| chr7.3 | CDS | 90804478 | 90804612 | 90804478 | ID=cds.MS.gene80966.t1;Parent=MS.gene80966.t1 |
| chr7.3 | exon | 90804120 | 90804350 | 90804120 | ID=MS.gene80966.t1.exon3;Parent=MS.gene80966.t1 |
| chr7.3 | CDS | 90804120 | 90804350 | 90804120 | ID=cds.MS.gene80966.t1;Parent=MS.gene80966.t1 |
| Gene Sequence |
| Protein sequence |
