AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49416

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49416.t1 MTR_1g115295 96.000 600 22 1 1 598 1 600 0.0 1204
MS.gene49416.t1 MTR_1g018280 70.117 512 45 7 87 598 58 461 0.0 671
MS.gene49416.t1 MTR_4g077700 26.930 583 339 23 57 572 19 581 4.50e-47 177
MS.gene49416.t1 MTR_4g122580 26.990 578 338 18 57 568 19 578 7.41e-45 171
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49416.t1 AT3G55400 73.884 605 141 3 1 588 1 605 0.0 927
MS.gene49416.t1 AT3G55400 75.534 515 111 2 1 500 1 515 0.0 814
MS.gene49416.t1 AT4G13780 25.874 572 345 19 57 567 20 573 2.01e-46 175

Find 182 sgRNAs with CRISPR-Local

Find 416 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATGGCCGTATACCATTT+TGG 0.163191 1.2:+85139010 None:intergenic
CGACGCCATTGCTCGCTTTC+AGG 0.172482 1.2:-85142028 MS.gene49416:intron
AACGATTTGGTTAGTAAGTT+TGG 0.200559 1.2:-85137705 MS.gene49416:CDS
GAGATGGAAATAGGGTTTAT+TGG 0.220234 1.2:+85142188 None:intergenic
TTCCTCAGAGAGGTGGAATT+TGG 0.232008 1.2:-85137660 MS.gene49416:CDS
AGAAGAAGGGAGATGGAAAT+AGG 0.249938 1.2:+85142179 None:intergenic
TGGCAGGAAATCTTCTTAAT+AGG 0.253659 1.2:-85137428 MS.gene49416:intron
TACGTTTCCATGCCGTTTAT+TGG 0.277442 1.2:-85139067 MS.gene49416:CDS
TTTAATTTGATAGCGGCTAT+TGG 0.277602 1.2:-85141918 MS.gene49416:intron
AAAGATGGCTGCACAAAGTT+TGG 0.304459 1.2:+85140791 None:intergenic
TTCCCGAGCATCCGTTGATT+GGG 0.310196 1.2:-85140001 MS.gene49416:CDS
GTATGGTTTGATGCTTTACT+AGG 0.314469 1.2:-85139940 MS.gene49416:CDS
TACGCTTGAACCAAACGATT+TGG 0.323345 1.2:-85137718 MS.gene49416:CDS
ATCAGCTTGTGAGGCTGTTC+TGG 0.327249 1.2:-85136769 MS.gene49416:CDS
TACCAAGTGGGGTGGACTTA+AGG 0.328656 1.2:-85136051 MS.gene49416:CDS
GAAACGGTGTTTAGTAAATC+AGG 0.339575 1.2:+85139594 None:intergenic
CCCAGGTTGCTGCTTCAAAT+TGG 0.340068 1.2:+85136154 None:intergenic
TTTCCCGAGCATCCGTTGAT+TGG 0.340690 1.2:-85140002 MS.gene49416:CDS
TGGGCTAAGCCTTCCCAAAA+TGG 0.344820 1.2:-85139024 MS.gene49416:CDS
CGTTAACGCCCCTCCTCATA+TGG 0.346271 1.2:-85142076 MS.gene49416:CDS
ATGCACAGCTTGGCTATTCC+AGG 0.357457 1.2:-85136179 MS.gene49416:CDS
CCAGCTATGCTAATGTCTGC+TGG 0.359184 1.2:-85139044 MS.gene49416:CDS
GAACTCAAGCTCGGAGTAAC+AGG 0.361149 1.2:+85136210 None:intergenic
ACCTTAAGCCTTGTGTTTCA+AGG 0.361855 1.2:-85140883 MS.gene49416:CDS
ACGATTTGGTTAGTAAGTTT+GGG 0.362204 1.2:-85137704 MS.gene49416:CDS
TTACTAAACACCGTTTCTTC+AGG 0.362225 1.2:-85139588 MS.gene49416:CDS
TCCTTGAAACACAAGGCTTA+AGG 0.367680 1.2:+85140882 None:intergenic
CCAGCTACACTGCACTTGAT+TGG 0.385424 1.2:-85139561 MS.gene49416:CDS
TTAATTTGATAGCGGCTATT+GGG 0.387680 1.2:-85141917 MS.gene49416:intron
ACCAAGTGGGGTGGACTTAA+GGG 0.391465 1.2:-85136050 MS.gene49416:CDS
CACAAGCTTACAAGACGCTT+TGG 0.398442 1.2:-85141790 MS.gene49416:CDS
GAGGTGGAATTTGGCAATGA+TGG 0.400433 1.2:-85137651 MS.gene49416:CDS
GAAGAAGGGAGATGGAAATA+GGG 0.400944 1.2:+85142180 None:intergenic
ATCAACGGATGCTCGGGAAA+TGG 0.401014 1.2:+85140005 None:intergenic
GTTGAGGTTGAGCCATGGCC+TGG 0.404063 1.2:+85136024 None:intergenic
AACTTACTAACCAAATCGTT+TGG 0.404070 1.2:+85137708 None:intergenic
AAGAAAGTTATATTCATTAC+CGG 0.407015 1.2:-85141893 MS.gene49416:CDS
TAATGCTGGTAATTCCTATA+TGG 0.408560 1.2:-85136739 MS.gene49416:CDS
TGTGAGGCTGTTCTGGAGAT+TGG 0.410328 1.2:-85136762 MS.gene49416:CDS
AGCCTTCCCAAAATGGTATA+CGG 0.411499 1.2:-85139017 MS.gene49416:CDS
CAGCCTCACAAGCTGATGTC+AGG 0.412097 1.2:+85136775 None:intergenic
AATAGGGTTTATTGGATTTG+AGG 0.414097 1.2:+85142196 None:intergenic
AGCAATGGCGTCGGCGGCGA+TGG 0.415306 1.2:+85142038 None:intergenic
CCAATCAAGTGCAGTGTAGC+TGG 0.425417 1.2:+85139561 None:intergenic
TGTCAGCTGTGAGGAATATA+AGG 0.426210 1.2:-85141208 MS.gene49416:intron
CATTTACCGAGCTGATTATG+AGG 0.426407 1.2:-85141241 MS.gene49416:CDS
TTGCAGAACAGAGCTGGTCT+TGG 0.428986 1.2:+85142156 None:intergenic
ATTCCTTTACCTCGTGTAAA+CGG 0.431671 1.2:+85140768 None:intergenic
GCACATCTTGCCAATACAAT+TGG 0.438695 1.2:-85137591 MS.gene49416:intron
TTCGTCATCATTTGAGGAAG+TGG 0.439070 1.2:+85142128 None:intergenic
CTCACCATGTTCATCGGTGC+CGG 0.442498 1.2:+85141874 None:intergenic
AGAGCTGGTCTTGGAGAAGA+AGG 0.442571 1.2:+85142165 None:intergenic
ACCAATTTGAAGCAGCAACC+TGG 0.444665 1.2:-85136155 MS.gene49416:CDS
GCTCAAAGTACCAATTGTAT+TGG 0.446015 1.2:+85137581 None:intergenic
GCCCCAATCAACGGATGCTC+GGG 0.451436 1.2:+85139999 None:intergenic
ACTTAAGGGTGGCCAGGCCA+TGG 0.453301 1.2:-85136036 MS.gene49416:CDS
TGAGTCTTGTCACTCGGAAC+AGG 0.454916 1.2:+85139973 None:intergenic
AAACAAGCTCAAGAAGTTGT+TGG 0.459841 1.2:-85135912 MS.gene49416:CDS
AGGGGCACGCTCATCCATAT+AGG 0.466606 1.2:+85136725 None:intergenic
TGCTGCTTCAAATTGGTCCC+TGG 0.467272 1.2:+85136161 None:intergenic
CCTCAGGCCACTATTGATCC+AGG 0.467562 1.2:+85140035 None:intergenic
AAACTGAAGTGGAAGACAAA+GGG 0.469002 1.2:-85135977 MS.gene49416:CDS
AAGAAGACTCTGAAAAGTAA+AGG 0.472328 1.2:-85135942 MS.gene49416:CDS
TAGCATAGCTGGCCAATAAA+CGG 0.473012 1.2:+85139055 None:intergenic
CCAGCAGACATTAGCATAGC+TGG 0.474341 1.2:+85139044 None:intergenic
GTCAAAATATCAGAAGTCAT+TGG 0.475950 1.2:-85140834 MS.gene49416:CDS
TGCCCCAATCAACGGATGCT+CGG 0.476088 1.2:+85139998 None:intergenic
GGATTTGAGGTGAGAAACAT+TGG 0.479677 1.2:+85142209 None:intergenic
AGAAGACTCTGAAAAGTAAA+GGG 0.482397 1.2:-85135941 MS.gene49416:CDS
GCCTTGTGTTTCAAGGAAAG+AGG 0.485059 1.2:-85140876 MS.gene49416:CDS
ATGTTAGGATGGTATGAAGA+TGG 0.485616 1.2:-85137757 MS.gene49416:intron
AGGTGGAATTTGGCAATGAT+GGG 0.485834 1.2:-85137650 MS.gene49416:CDS
CTCCCTGACATCAGCTTGTG+AGG 0.486304 1.2:-85136778 MS.gene49416:CDS
TTAGTAAATCAGGTTGCTCC+TGG 0.489812 1.2:+85139604 None:intergenic
GAGTAAGCGCTGCCCATATG+AGG 0.492891 1.2:+85142063 None:intergenic
CAAGGACAATGTAGCGAGGC+TGG 0.493628 1.2:-85137328 MS.gene49416:intron
ATTGGAACGAAGTGAAAGAA+TGG 0.493740 1.2:+85142227 None:intergenic
GGGTGGACTTAAGGGTGGCC+AGG 0.494372 1.2:-85136042 MS.gene49416:CDS
ATCCTAGCAAAGATTGGTTG+AGG 0.496658 1.2:+85136008 None:intergenic
GGCTCAAGGTTCCACCCCTA+CGG 0.496674 1.2:-85141831 MS.gene49416:CDS
TGCAGAAGGAAATGCATTCA+AGG 0.496773 1.2:-85137346 MS.gene49416:CDS
TGTTAGGATGGTATGAAGAT+GGG 0.497162 1.2:-85137756 MS.gene49416:intron
AATCCACTGCCAGTGTTGAT+TGG 0.502097 1.2:+85137379 None:intergenic
GTAGGGTTCGTCATCATTTG+AGG 0.505930 1.2:+85142122 None:intergenic
CTGCCAATCAACACTGGCAG+TGG 0.507171 1.2:-85137382 MS.gene49416:CDS
GCAACTGCTGCCGTGGCTCA+AGG 0.510640 1.2:-85141845 MS.gene49416:CDS
ACCCTTAAGTCCACCCCACT+TGG 0.511818 1.2:+85136049 None:intergenic
AGACTCAGACTATATATGTA+TGG 0.517740 1.2:-85139957 MS.gene49416:CDS
CTATTTGATGCAGGATGAGA+AGG 0.520213 1.2:-85140936 MS.gene49416:intron
TGAGATTGCAATGGTCCGTA+GGG 0.524472 1.2:+85141816 None:intergenic
AGCTGGCCAACCTGAAGAAA+CGG 0.524943 1.2:+85139578 None:intergenic
TATGGTTTGATGCTTTACTA+GGG 0.525816 1.2:-85139939 MS.gene49416:intron
TAAACACCGTTTCTTCAGGT+TGG 0.526746 1.2:-85139584 MS.gene49416:CDS
AATCTTCTTAATAGGACTCT+AGG 0.528211 1.2:-85137420 MS.gene49416:CDS
GTTCAAACCTGGATCAATAG+TGG 0.530179 1.2:-85140042 MS.gene49416:CDS
CCTTGGTCTCTCTTTAAGCA+AGG 0.530338 1.2:-85136705 MS.gene49416:CDS
CAGCTATGCTAATGTCTGCT+GGG 0.530697 1.2:-85139043 MS.gene49416:CDS
GTTCTGGAGATTGGTAATGC+TGG 0.538081 1.2:-85136753 MS.gene49416:CDS
AATGGCGTCGGCGGCGATGG+TGG 0.539434 1.2:+85142041 None:intergenic
GAGCATTTGCAGAACAGAGC+TGG 0.542714 1.2:+85142150 None:intergenic
CCCAAAATGGTATACGGCCA+TGG 0.542751 1.2:-85139011 MS.gene49416:CDS
GATTCCACGGTGGCTGCAGA+AGG 0.543559 1.2:-85137360 MS.gene49416:CDS
TGCTTCTGAAGCAGCTGCCA+AGG 0.545752 1.2:-85136676 MS.gene49416:intron
TCCCGAGCATCCGTTGATTG+GGG 0.545821 1.2:-85140000 MS.gene49416:CDS
GTCTTGGAGAAGAAGGGAGA+TGG 0.547721 1.2:+85142172 None:intergenic
ATGAAGATGGGCAAGTCACT+AGG 0.550900 1.2:-85137744 MS.gene49416:CDS
ATATGGATGAGCGTGCCCCT+TGG 0.551543 1.2:-85136722 MS.gene49416:CDS
AGCTCGGTAAATGTCACCAT+TGG 0.558279 1.2:+85141251 None:intergenic
CTGTCTCTAATATAATTACA+AGG 0.560785 1.2:+85136259 None:intergenic
ATGAGATTGCAATGGTCCGT+AGG 0.561506 1.2:+85141815 None:intergenic
TATTCGAGAGTGCTTGCCAA+TGG 0.562606 1.2:-85141267 MS.gene49416:CDS
AACAGGTATGCCCCAATCAA+CGG 0.565056 1.2:+85139990 None:intergenic
ACCTCGTGTAAACGGAAAGA+TGG 0.565307 1.2:+85140776 None:intergenic
AACCTCAACCAATCTTTGCT+AGG 0.565548 1.2:-85136010 MS.gene49416:CDS
ATCAGCACTAGCTGATGACC+AGG 0.568431 1.2:-85139622 MS.gene49416:CDS
ATACTTCTTCCTCAGAGAGG+TGG 0.569549 1.2:-85137667 MS.gene49416:CDS
AAAGCGAGCAATGGCGTCGG+CGG 0.570755 1.2:+85142032 None:intergenic
ATTGCAATGGTCCGTAGGGG+TGG 0.570970 1.2:+85141820 None:intergenic
CCAATTTGAAGCAGCAACCT+GGG 0.571584 1.2:-85136154 MS.gene49416:intron
GATTGAAAATCAAACTGAAG+TGG 0.574353 1.2:-85135988 MS.gene49416:CDS
TCCTCTTTCCTTGAAACACA+AGG 0.575285 1.2:+85140875 None:intergenic
GGGGCGTTAACGTAGTAAAG+AGG 0.576539 1.2:+85142087 None:intergenic
TAAATTTCTAGGTTCAAACC+TGG 0.577775 1.2:-85140053 MS.gene49416:intron
TTGAAACACAAGGCTTAAGG+TGG 0.578255 1.2:+85140885 None:intergenic
TACACTGCACTTGATTGGTA+AGG 0.579282 1.2:-85139556 MS.gene49416:intron
TATATTCTCGAACTCAAGCT+CGG 0.581656 1.2:+85136201 None:intergenic
AAGAGGGGTTGTGATGACGT+AGG 0.584740 1.2:+85142104 None:intergenic
AGCGCTGCCCATATGAGGAG+GGG 0.586186 1.2:+85142068 None:intergenic
GTTAACGCCCCTCCTCATAT+GGG 0.587213 1.2:-85142075 MS.gene49416:CDS
AAAATATCAGAAGTCATTGG+AGG 0.587646 1.2:-85140831 MS.gene49416:CDS
GGGCGTTAACGTAGTAAAGA+GGG 0.589775 1.2:+85142088 None:intergenic
GGGAAATGGAAAAGTCCCTC+AGG 0.591961 1.2:+85140019 None:intergenic
GAAAATTGCAACTGCTGCCG+TGG 0.592158 1.2:-85141852 MS.gene49416:CDS
ATACCTTCGTCAAGAATCCA+TGG 0.594060 1.2:+85138994 None:intergenic
AGCCTCACAAGCTGATGTCA+GGG 0.594895 1.2:+85136776 None:intergenic
TCGAGAATATATGCACAGCT+TGG 0.599510 1.2:-85136189 MS.gene49416:CDS
TAGCTGGCCAATAAACGGCA+TGG 0.600474 1.2:+85139060 None:intergenic
ACACAAGGCTTAAGGTGGAT+CGG 0.602973 1.2:+85140890 None:intergenic
CAAACTGAAGTGGAAGACAA+AGG 0.603151 1.2:-85135978 MS.gene49416:CDS
ATTTACCGAGCTGATTATGA+GGG 0.603837 1.2:-85141240 MS.gene49416:CDS
CCTTGCTTAAAGAGAGACCA+AGG 0.604022 1.2:+85136705 None:intergenic
AAAGAACTGCCAATCAACAC+TGG 0.604833 1.2:-85137388 MS.gene49416:CDS
CAAGCATGAAGCAATTGTGA+AGG 0.606448 1.2:-85141295 MS.gene49416:CDS
CTGGATCAATAGTGGCCTGA+GGG 0.608588 1.2:-85140034 MS.gene49416:CDS
AGGGGTGGAACCTTGAGCCA+CGG 0.609720 1.2:+85141835 None:intergenic
AGAGGGGTTGTGATGACGTA+GGG 0.611101 1.2:+85142105 None:intergenic
AAGCGCTGCCCATATGAGGA+GGG 0.613611 1.2:+85142067 None:intergenic
AACACTGGCAGTGGATTCCA+CGG 0.615601 1.2:-85137373 MS.gene49416:CDS
AAATTCCCTCATAATCAGCT+CGG 0.616005 1.2:+85141235 None:intergenic
TAAGCGCTGCCCATATGAGG+AGG 0.622703 1.2:+85142066 None:intergenic
ATTACCGGCACCGATGAACA+TGG 0.624333 1.2:-85141878 MS.gene49416:CDS
GAGCTGGTCTTGGAGAAGAA+GGG 0.624359 1.2:+85142166 None:intergenic
TGCACAGCTTGGCTATTCCA+GGG 0.630460 1.2:-85136178 MS.gene49416:CDS
GAAGACAAAGGGGTTGCAGT+CGG 0.633467 1.2:-85135966 MS.gene49416:CDS
CTGAAAGCGAGCAATGGCGT+CGG 0.634768 1.2:+85142029 None:intergenic
GCCATCTTTCCGTTTACACG+AGG 0.638336 1.2:-85140777 MS.gene49416:intron
AGGTACCTGAAAGCGAGCAA+TGG 0.639138 1.2:+85142023 None:intergenic
TAGAGAGATACCAAGTGGGG+TGG 0.641306 1.2:-85136059 MS.gene49416:CDS
AACTGAAGTGGAAGACAAAG+GGG 0.642983 1.2:-85135976 MS.gene49416:CDS
ATAGTCTGAGTCTTGTCACT+CGG 0.651357 1.2:+85139967 None:intergenic
CAATGATGGGGACTATTCAG+AGG 0.651752 1.2:-85137637 MS.gene49416:CDS
GATTGGTTGAGGTTGAGCCA+TGG 0.658278 1.2:+85136019 None:intergenic
TGCCAAATTCCACCTCTCTG+AGG 0.662782 1.2:+85137658 None:intergenic
ATTGTAGAGAGATACCAAGT+GGG 0.663995 1.2:-85136063 MS.gene49416:intron
TGGTCTCTCTTTAAGCAAGG+AGG 0.665745 1.2:-85136702 MS.gene49416:CDS
CATTGTAGAGAGATACCAAG+TGG 0.666340 1.2:-85136064 MS.gene49416:intron
CTTGCTTAAAGAGAGACCAA+GGG 0.666502 1.2:+85136706 None:intergenic
TAGATACTTCTTCCTCAGAG+AGG 0.671329 1.2:-85137670 MS.gene49416:CDS
GGTGGAATTTGGCAATGATG+GGG 0.671855 1.2:-85137649 MS.gene49416:CDS
CCTGGATCAATAGTGGCCTG+AGG 0.674293 1.2:-85140035 MS.gene49416:CDS
AATTTATTGTGTCAGCTGTG+AGG 0.678267 1.2:-85141217 MS.gene49416:CDS
GGCGTTAACGTAGTAAAGAG+GGG 0.684483 1.2:+85142089 None:intergenic
AGTAACAGGAGATAGTGCAA+TGG 0.702926 1.2:+85136224 None:intergenic
TTGTAGAGAGATACCAAGTG+GGG 0.703831 1.2:-85136062 MS.gene49416:intron
CGGCCATGGATTCTTGACGA+AGG 0.712399 1.2:-85138997 MS.gene49416:intron
TTGCTTAAAGAGAGACCAAG+GGG 0.714060 1.2:+85136707 None:intergenic
CATTCAAGGACAATGTAGCG+AGG 0.714076 1.2:-85137332 MS.gene49416:CDS
AAGTGGGGTGGACTTAAGGG+TGG 0.714266 1.2:-85136047 MS.gene49416:CDS
GAGATTGCAATGGTCCGTAG+GGG 0.717593 1.2:+85141817 None:intergenic
ATTTCCTTCTGCAGCCACCG+TGG 0.736364 1.2:+85137356 None:intergenic
CTTGTGAAATGAGATTGCAA+TGG 0.748586 1.2:+85141807 None:intergenic
ACTGGCAGTGGATTCCACGG+TGG 0.777092 1.2:-85137370 MS.gene49416:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATATATAAAGCATTA+AGG + chr1.2:85140012-85140031 None:intergenic 10.0%
!!! GTTTTCTTTAATAATTTATT+TGG - chr1.2:85138073-85138092 MS.gene49416:intron 10.0%
!!! TATTATATTTAATTTGATAG+CGG - chr1.2:85136247-85136266 MS.gene49416:CDS 10.0%
!! AAAAAAATATGAAAGAAAAG+AGG + chr1.2:85138649-85138668 None:intergenic 15.0%
!! AGAAACATAAGATAATAAAT+AGG + chr1.2:85139215-85139234 None:intergenic 15.0%
!! CAATGATTAATAACTATAAA+GGG + chr1.2:85138989-85139008 None:intergenic 15.0%
!! TAAAAGTTATTATCTAACTT+TGG - chr1.2:85136214-85136233 MS.gene49416:CDS 15.0%
!! TAAGAAACTTAAAAGAAAAA+AGG + chr1.2:85137181-85137200 None:intergenic 15.0%
!! TATAATGCTACAAATATTAT+TGG + chr1.2:85141635-85141654 None:intergenic 15.0%
!! TGAAATCTAATTTAATCATT+TGG - chr1.2:85137845-85137864 MS.gene49416:intron 15.0%
!! TTTCTTCTATATAAATTTCT+AGG - chr1.2:85138108-85138127 MS.gene49416:intron 15.0%
!!! AAAAGAGTTAATGAAAATTT+TGG + chr1.2:85136767-85136786 None:intergenic 15.0%
!!! ATAACTATTTCATTTTTGTT+AGG + chr1.2:85141138-85141157 None:intergenic 15.0%
!!! CTTTTTATTTTGAAAATGTT+AGG - chr1.2:85140400-85140419 MS.gene49416:intron 15.0%
!!! TAATTCCTTTTTATTTTCTA+TGG - chr1.2:85138794-85138813 MS.gene49416:intron 15.0%
!!! TTTTCATTAAAATGATTTTG+TGG - chr1.2:85137709-85137728 MS.gene49416:CDS 15.0%
!!! TTTTTAAAGATACTACTATT+AGG + chr1.2:85139716-85139735 None:intergenic 15.0%
!! AACATTATCATTATCATCAT+CGG - chr1.2:85138334-85138353 MS.gene49416:intron 20.0%
!! AAGAAAGTTATATTCATTAC+CGG - chr1.2:85136279-85136298 MS.gene49416:intron 20.0%
!! AATTTGATCAAATATCAATC+AGG + chr1.2:85141696-85141715 None:intergenic 20.0%
!! AGATGAAAAGAAGAAAAATA+TGG - chr1.2:85141012-85141031 MS.gene49416:intron 20.0%
!! ATAAGTGAAAATTCTTTCTT+AGG + chr1.2:85141878-85141897 None:intergenic 20.0%
!! ATAATCTTAACAAGTTTACA+AGG + chr1.2:85140210-85140229 None:intergenic 20.0%
!! ATAGATCCAAATTCAATAAA+TGG + chr1.2:85139640-85139659 None:intergenic 20.0%
!! ATTAATGTGAGAAAAGAAAA+AGG + chr1.2:85141737-85141756 None:intergenic 20.0%
!! ATTATAAAAGATAGATTCTG+TGG - chr1.2:85141649-85141668 MS.gene49416:intron 20.0%
!! CAAGTTCATTATTTCATTAA+TGG - chr1.2:85139059-85139078 MS.gene49416:CDS 20.0%
!! CCAATGATTAATAACTATAA+AGG + chr1.2:85138990-85139009 None:intergenic 20.0%
!! CCTTTATAGTTATTAATCAT+TGG - chr1.2:85138987-85139006 MS.gene49416:intron 20.0%
!! GAAAACTTATATGATTCAAA+TGG - chr1.2:85137570-85137589 MS.gene49416:intron 20.0%
!! GTTTATGTAATATATGTTCT+AGG + chr1.2:85141528-85141547 None:intergenic 20.0%
!! TATTTCTCACTTAAAAGAAA+AGG + chr1.2:85138731-85138750 None:intergenic 20.0%
!! TGAAAACTATAAACTAAACT+TGG - chr1.2:85140311-85140330 MS.gene49416:intron 20.0%
!! TTCATTCCATTTATTGAATT+TGG - chr1.2:85139631-85139650 MS.gene49416:CDS 20.0%
!!! AAACAATCTGAATTTTGATT+TGG - chr1.2:85137919-85137938 MS.gene49416:intron 20.0%
!!! ACCATATTTTTAGTTCAATA+CGG + chr1.2:85139351-85139370 None:intergenic 20.0%
!!! AGTAAAAGTAATTTGATAGT+TGG - chr1.2:85140286-85140305 MS.gene49416:intron 20.0%
!!! ATAGCAATTTTGTAAATTTG+AGG + chr1.2:85136484-85136503 None:intergenic 20.0%
!!! TAGCAATTTTGTAAATTTGA+GGG + chr1.2:85136483-85136502 None:intergenic 20.0%
!!! TGATACATTTTTAGTAAAGA+TGG - chr1.2:85136649-85136668 MS.gene49416:intron 20.0%
!!! TGATCAATATTTACTTTTGT+AGG - chr1.2:85141340-85141359 MS.gene49416:intron 20.0%
!!! TGTAAACTTGTTAAGATTAT+CGG - chr1.2:85140210-85140229 MS.gene49416:intron 20.0%
!!! TTATTTTGAAAATGTTAGGA+TGG - chr1.2:85140404-85140423 MS.gene49416:intron 20.0%
! AACTTCATACACTAAAATGT+TGG - chr1.2:85141545-85141564 MS.gene49416:intron 25.0%
! AATAATGAACTTGAATGCTT+TGG + chr1.2:85139052-85139071 None:intergenic 25.0%
! ACCGTATTGAACTAAAAATA+TGG - chr1.2:85139347-85139366 MS.gene49416:intron 25.0%
! ACTATAACGATGATTTACTA+AGG + chr1.2:85136430-85136449 None:intergenic 25.0%
! ATACAAGATCTTTACTTAGA+AGG - chr1.2:85137044-85137063 MS.gene49416:intron 25.0%
! ATACATTAAGTGATCGAATT+CGG + chr1.2:85137885-85137904 None:intergenic 25.0%
! ATGCTTATTATACTTGGTTA+AGG + chr1.2:85141809-85141828 None:intergenic 25.0%
! ATTATGCACGATTATTTGTA+TGG - chr1.2:85138397-85138416 MS.gene49416:intron 25.0%
! CATTTCTTGTAAATAAGAGA+CGG + chr1.2:85139279-85139298 None:intergenic 25.0%
! CCAAACCATAGAAAATAAAA+AGG + chr1.2:85138802-85138821 None:intergenic 25.0%
! CTATAACGATGATTTACTAA+GGG + chr1.2:85136429-85136448 None:intergenic 25.0%
! CTGTCTCTAATATAATTACA+AGG + chr1.2:85141916-85141935 None:intergenic 25.0%
! GAAACAGATTTATAAGACTT+TGG + chr1.2:85140351-85140370 None:intergenic 25.0%
! GTTATCTATCTTCCAAATAA+AGG + chr1.2:85137115-85137134 None:intergenic 25.0%
! TAACATGAATACAACTTTCT+GGG + chr1.2:85141095-85141114 None:intergenic 25.0%
! TACAAGATCTTTACTTAGAA+GGG - chr1.2:85137045-85137064 MS.gene49416:intron 25.0%
! TCTATTTACCATCCTTTATT+TGG - chr1.2:85137100-85137119 MS.gene49416:intron 25.0%
! TGACATTACTTCTTAAATTC+TGG - chr1.2:85140146-85140165 MS.gene49416:intron 25.0%
! TGCTTATTATACTTGGTTAA+GGG + chr1.2:85141808-85141827 None:intergenic 25.0%
! TGGAATATGCTTATTATACT+TGG + chr1.2:85141815-85141834 None:intergenic 25.0%
! TTATCTTATGTTTCTTCTTG+AGG - chr1.2:85139220-85139239 MS.gene49416:intron 25.0%
! TTATGACAAGTGGATAAAAA+TGG + chr1.2:85138828-85138847 None:intergenic 25.0%
!! AAGCATTATTCCACTATTTT+TGG + chr1.2:85137981-85138000 None:intergenic 25.0%
!! AAGTGAGAGTTAATCAATTT+TGG + chr1.2:85137776-85137795 None:intergenic 25.0%
!! AGAATTTTCACTTATGATGT+TGG - chr1.2:85141883-85141902 MS.gene49416:CDS 25.0%
!! ATTGACGTTCTTTGATTTAT+GGG - chr1.2:85136682-85136701 MS.gene49416:CDS 25.0%
!! CTTAAATTCTGGTTAAAATG+TGG - chr1.2:85140157-85140176 MS.gene49416:intron 25.0%
!! GTTTTTACAATCTTCTATAC+CGG + chr1.2:85137744-85137763 None:intergenic 25.0%
!! TAATCAATTTTGGATGCTAT+TGG + chr1.2:85137766-85137785 None:intergenic 25.0%
!! TTTTGGTCCTCAAAATTTTA+GGG + chr1.2:85136750-85136769 None:intergenic 25.0%
!! TTTTTACAATCTTCTATACC+GGG + chr1.2:85137743-85137762 None:intergenic 25.0%
!!! AGAAAAAGGTGTTTAGTATT+TGG + chr1.2:85141723-85141742 None:intergenic 25.0%
!!! AGCATTATTCCACTATTTTT+GGG + chr1.2:85137980-85137999 None:intergenic 25.0%
!!! ATTTTGGTCCTCAAAATTTT+AGG + chr1.2:85136751-85136770 None:intergenic 25.0%
!!! CCTTTTTATTTTCTATGGTT+TGG - chr1.2:85138799-85138818 MS.gene49416:intron 25.0%
!!! TATTGAGCTCTTATTTTCTA+AGG + chr1.2:85140058-85140077 None:intergenic 25.0%
!!! TTTATATGCTTTTCAAGTCT+TGG - chr1.2:85137626-85137645 MS.gene49416:CDS 25.0%
AAAATATCAGAAGTCATTGG+AGG - chr1.2:85137341-85137360 MS.gene49416:CDS 30.0%
AAACGAAAAGAAGTGACATA+TGG + chr1.2:85141835-85141854 None:intergenic 30.0%
AACCATCACAAAAATACAGA+TGG + chr1.2:85138958-85138977 None:intergenic 30.0%
AACCATTGTAGATAAGTTGT+GGG - chr1.2:85141296-85141315 MS.gene49416:CDS 30.0%
AACTTACTAACCAAATCGTT+TGG + chr1.2:85140467-85140486 None:intergenic 30.0%
AATAGGGTTTATTGGATTTG+AGG + chr1.2:85135979-85135998 None:intergenic 30.0%
AATCTTCTTAATAGGACTCT+AGG - chr1.2:85140752-85140771 MS.gene49416:intron 30.0%
AATTACAGAAACACAATCCA+AGG + chr1.2:85141245-85141264 None:intergenic 30.0%
AGACTCAGACTATATATGTA+TGG - chr1.2:85138215-85138234 MS.gene49416:intron 30.0%
ATGATTCAAATGGATAGAGT+AGG - chr1.2:85137580-85137599 MS.gene49416:intron 30.0%
ATTACAGAAACACAATCCAA+GGG + chr1.2:85141244-85141263 None:intergenic 30.0%
ATTTACAAGAAATGCTGAGT+AGG - chr1.2:85139285-85139304 MS.gene49416:intron 30.0%
ATTTACCATCACAAGTTTAG+AGG - chr1.2:85136550-85136569 MS.gene49416:intron 30.0%
GATTGAAAATCAAACTGAAG+TGG - chr1.2:85142184-85142203 MS.gene49416:CDS 30.0%
GTAACATGAATACAACTTTC+TGG + chr1.2:85141096-85141115 None:intergenic 30.0%
GTAAGAAATGTAACAGATAG+AGG + chr1.2:85137471-85137490 None:intergenic 30.0%
GTATCAAAAGTTCAAAACCA+CGG + chr1.2:85136635-85136654 None:intergenic 30.0%
GTCAAAATATCAGAAGTCAT+TGG - chr1.2:85137338-85137357 MS.gene49416:CDS 30.0%
TAAGAGAGAATTATGACAAG+TGG + chr1.2:85138838-85138857 None:intergenic 30.0%
TAATGCTGGTAATTCCTATA+TGG - chr1.2:85141433-85141452 MS.gene49416:intron 30.0%
TAATGTCATGATGTAGAAGA+TGG + chr1.2:85140134-85140153 None:intergenic 30.0%
TATCTACAATGGTTGAAAGA+TGG + chr1.2:85141290-85141309 None:intergenic 30.0%
TATGGTTTGATGCTTTACTA+GGG - chr1.2:85138233-85138252 MS.gene49416:intron 30.0%
TCAATCAGGTAAAGATTTAG+TGG + chr1.2:85141682-85141701 None:intergenic 30.0%
TCTATCTTCCAAATAAAGGA+TGG + chr1.2:85137111-85137130 None:intergenic 30.0%
TCTGTTTAGATTGTCTTATC+CGG + chr1.2:85140995-85141014 None:intergenic 30.0%
TGATTTACTAAGGGATGAAA+TGG + chr1.2:85136420-85136439 None:intergenic 30.0%
TGTTACAAGCAATGAAAGTA+AGG + chr1.2:85140652-85140671 None:intergenic 30.0%
TGTTCAACAAGAGTTTAGTA+AGG + chr1.2:85138494-85138513 None:intergenic 30.0%
TTTACAGACATATGAGAGAT+TGG + chr1.2:85139605-85139624 None:intergenic 30.0%
! AAGAAGACTCTGAAAAGTAA+AGG - chr1.2:85142230-85142249 MS.gene49416:CDS 30.0%
! AATTTTCTCACCATGTTCAT+CGG + chr1.2:85136307-85136326 None:intergenic 30.0%
! AGAACTATTTGAAGTTCTAG+AGG + chr1.2:85137083-85137102 None:intergenic 30.0%
! AGAAGACTCTGAAAAGTAAA+GGG - chr1.2:85142231-85142250 MS.gene49416:CDS 30.0%
! ATAGCCTTTTCCTAGTATTT+GGG + chr1.2:85138869-85138888 None:intergenic 30.0%
! ATTCTGGTTAAAATGTGGTT+AGG - chr1.2:85140162-85140181 MS.gene49416:intron 30.0%
! CAAAACCTCTTTCACTATTT+TGG - chr1.2:85140724-85140743 MS.gene49416:intron 30.0%
! CAACTTAGATAGATCGTTTT+AGG - chr1.2:85141039-85141058 MS.gene49416:intron 30.0%
! CACAAAAATACAGATGGATT+TGG + chr1.2:85138952-85138971 None:intergenic 30.0%
! GATTGACGTTCTTTGATTTA+TGG - chr1.2:85136681-85136700 MS.gene49416:CDS 30.0%
! GGAATACATTTGAAGCATTA+CGG + chr1.2:85140037-85140056 None:intergenic 30.0%
! TAAATTTCTAGGTTCAAACC+TGG - chr1.2:85138119-85138138 MS.gene49416:intron 30.0%
! TTCTGGTTAAAATGTGGTTA+GGG - chr1.2:85140163-85140182 MS.gene49416:intron 30.0%
! TTTTCAATCCTAGCAAAGAT+TGG + chr1.2:85142173-85142192 None:intergenic 30.0%
!! AACGATTTGGTTAGTAAGTT+TGG - chr1.2:85140467-85140486 MS.gene49416:intron 30.0%
!! AATGTATTGCTATTTGATGC+AGG - chr1.2:85137227-85137246 MS.gene49416:intron 30.0%
!! ACGATTTGGTTAGTAAGTTT+GGG - chr1.2:85140468-85140487 MS.gene49416:intron 30.0%
!! ATAAAACTTGCTAACACTGT+TGG + chr1.2:85140089-85140108 None:intergenic 30.0%
!! ATATGTCACTTCTTTTCGTT+TGG - chr1.2:85141834-85141853 MS.gene49416:CDS 30.0%
!! ATCCATCTGTATTTTTGTGA+TGG - chr1.2:85138953-85138972 MS.gene49416:intron 30.0%
!! GTTGTACTCATAACTTGTTA+AGG - chr1.2:85138758-85138777 MS.gene49416:intron 30.0%
!! TATGTCACTTCTTTTCGTTT+GGG - chr1.2:85141835-85141854 MS.gene49416:CDS 30.0%
!! TCATAACTTGTTAAGGTAGA+AGG - chr1.2:85138765-85138784 MS.gene49416:intron 30.0%
!! TTAATTTGATAGCGGCTATT+GGG - chr1.2:85136255-85136274 MS.gene49416:CDS 30.0%
!! TTTAATTTGATAGCGGCTAT+TGG - chr1.2:85136254-85136273 MS.gene49416:CDS 30.0%
!!! GCATTATTCCACTATTTTTG+GGG + chr1.2:85137979-85137998 None:intergenic 30.0%
!!! TAATGGTTTTGTTACTCTGT+AGG - chr1.2:85139076-85139095 MS.gene49416:CDS 30.0%
AAACAAGCTCAAGAAGTTGT+TGG - chr1.2:85142260-85142279 MS.gene49416:CDS 35.0%
AAACTGAAGTGGAAGACAAA+GGG - chr1.2:85142195-85142214 MS.gene49416:CDS 35.0%
AAAGCTAATAGAATAGAGCC+AGG + chr1.2:85138302-85138321 None:intergenic 35.0%
AAATTCCCTCATAATCAGCT+CGG + chr1.2:85136940-85136959 None:intergenic 35.0%
AACTGCATATCATCTCTTTC+AGG - chr1.2:85138036-85138055 MS.gene49416:intron 35.0%
AAGCTAATAGAATAGAGCCA+GGG + chr1.2:85138301-85138320 None:intergenic 35.0%
AATAAAACGAGAATGCTGCT+CGG - chr1.2:85139571-85139590 MS.gene49416:CDS 35.0%
AATTTATTGTGTCAGCTGTG+AGG - chr1.2:85136955-85136974 MS.gene49416:intron 35.0%
ACCTATTATCTAACTTCCGT+GGG - chr1.2:85136168-85136187 MS.gene49416:CDS 35.0%
AGACATATGAGAGATTGGAA+TGG + chr1.2:85139600-85139619 None:intergenic 35.0%
AGCTGCACATACAAAAAGAA+AGG + chr1.2:85138526-85138545 None:intergenic 35.0%
AGTCAAAATCTCGTTCTACT+CGG - chr1.2:85138900-85138919 MS.gene49416:intron 35.0%
ATGTTAGGATGGTATGAAGA+TGG - chr1.2:85140415-85140434 MS.gene49416:intron 35.0%
ATTCCTTTACCTCGTGTAAA+CGG + chr1.2:85137407-85137426 None:intergenic 35.0%
ATTGGAACGAAGTGAAAGAA+TGG + chr1.2:85135948-85135967 None:intergenic 35.0%
ATTGTAGAGAGATACCAAGT+GGG - chr1.2:85142109-85142128 MS.gene49416:CDS 35.0%
ATTTACCGAGCTGATTATGA+GGG - chr1.2:85136932-85136951 MS.gene49416:intron 35.0%
CAACCATTGTAGATAAGTTG+TGG - chr1.2:85141295-85141314 MS.gene49416:CDS 35.0%
CTTACATACTGCAATTCAAG+CGG - chr1.2:85137486-85137505 MS.gene49416:intron 35.0%
CTTGTGAAATGAGATTGCAA+TGG + chr1.2:85136368-85136387 None:intergenic 35.0%
CTTTCAGGAGAACTTCAAAT+GGG - chr1.2:85138051-85138070 MS.gene49416:intron 35.0%
GAAACGGTGTTTAGTAAATC+AGG + chr1.2:85138581-85138600 None:intergenic 35.0%
GAGATGGAAATAGGGTTTAT+TGG + chr1.2:85135987-85136006 None:intergenic 35.0%
GGCTACTCAAGTAAAACATT+AGG - chr1.2:85136604-85136623 MS.gene49416:intron 35.0%
GGTAACGATTGTGTCAAAAT+AGG - chr1.2:85139795-85139814 MS.gene49416:intron 35.0%
GTATGGTTTGATGCTTTACT+AGG - chr1.2:85138232-85138251 MS.gene49416:intron 35.0%
TAAAACATTAGGTCTTTCCG+TGG - chr1.2:85136615-85136634 MS.gene49416:intron 35.0%
TACCTATTATCTAACTTCCG+TGG - chr1.2:85136167-85136186 MS.gene49416:CDS 35.0%
TAGAACCTCTAAACTTGTGA+TGG + chr1.2:85136558-85136577 None:intergenic 35.0%
TATAGTCAACCCCAAATACT+AGG - chr1.2:85138856-85138875 MS.gene49416:intron 35.0%
TATATTCTCGAACTCAAGCT+CGG + chr1.2:85141974-85141993 None:intergenic 35.0%
TATGTAGTTACACGACCTTA+AGG + chr1.2:85137688-85137707 None:intergenic 35.0%
TCGTGAAATACCTATATCAC+AGG + chr1.2:85138017-85138036 None:intergenic 35.0%
TCTTTCAGGAGAACTTCAAA+TGG - chr1.2:85138050-85138069 MS.gene49416:intron 35.0%
TGCATGATTGAAAACTGAAG+TGG + chr1.2:85139482-85139501 None:intergenic 35.0%
TGGCAGGAAATCTTCTTAAT+AGG - chr1.2:85140744-85140763 MS.gene49416:intron 35.0%
TGTTACAAGCAATGAAAGCA+AGG + chr1.2:85140616-85140635 None:intergenic 35.0%
TGTTAGGATGGTATGAAGAT+GGG - chr1.2:85140416-85140435 MS.gene49416:intron 35.0%
TTAAGTGATCGAATTCGGAT+TGG + chr1.2:85137880-85137899 None:intergenic 35.0%
TTACACGAGGTAAAGGAATA+TGG - chr1.2:85137408-85137427 MS.gene49416:CDS 35.0%
TTACATACTGCAATTCAAGC+GGG - chr1.2:85137487-85137506 MS.gene49416:intron 35.0%
TTACTAAACACCGTTTCTTC+AGG - chr1.2:85138584-85138603 MS.gene49416:intron 35.0%
TTGATCAACCTTTGTGTTAC+AGG + chr1.2:85141327-85141346 None:intergenic 35.0%
TTTGAGGGACTAAATTGATG+AGG + chr1.2:85136468-85136487 None:intergenic 35.0%
! ACTTCAGTTTTCAATCATGC+AGG - chr1.2:85139481-85139500 MS.gene49416:intron 35.0%
! GATAGCCTTTTCCTAGTATT+TGG + chr1.2:85138870-85138889 None:intergenic 35.0%
! GCTCAAAGTACCAATTGTAT+TGG + chr1.2:85140594-85140613 None:intergenic 35.0%
! TAGCCTTTTCCTAGTATTTG+GGG + chr1.2:85138868-85138887 None:intergenic 35.0%
! TGTACAGTTCACAATGGTTT+TGG + chr1.2:85139438-85139457 None:intergenic 35.0%
!! TATGTTCTAGGAGAATACCT+TGG + chr1.2:85141516-85141535 None:intergenic 35.0%
!! TTGACGAAGGTATTAGTACT+CGG - chr1.2:85139188-85139207 MS.gene49416:intron 35.0%
!! TTTGCTGTTTCGTAAAATCG+AGG - chr1.2:85136710-85136729 MS.gene49416:CDS 35.0%
!!! AAGGTGATAGTTTTAACTCG+AGG - chr1.2:85136983-85137002 MS.gene49416:intron 35.0%
!!! AATTTTAGGGTGGAGCAATT+TGG + chr1.2:85136737-85136756 None:intergenic 35.0%
!!! AGTTCACAATGGTTTTGGTT+TGG + chr1.2:85139433-85139452 None:intergenic 35.0%
AAAGAACTGCCAATCAACAC+TGG - chr1.2:85140784-85140803 MS.gene49416:CDS 40.0%
AAAGATGGCTGCACAAAGTT+TGG + chr1.2:85137384-85137403 None:intergenic 40.0%
AACCTCAACCAATCTTTGCT+AGG - chr1.2:85142162-85142181 MS.gene49416:CDS 40.0%
AACTGAAGTGGAAGACAAAG+GGG - chr1.2:85142196-85142215 MS.gene49416:CDS 40.0%
ACCCACGGAAGTTAGATAAT+AGG + chr1.2:85136172-85136191 None:intergenic 40.0%
ACTTGGATTGACATGCTTTC+AGG - chr1.2:85139940-85139959 MS.gene49416:CDS 40.0%
AGAAGAAGGGAGATGGAAAT+AGG + chr1.2:85135996-85136015 None:intergenic 40.0%
AGCAGTTTCACCTGTGATAT+AGG - chr1.2:85138004-85138023 MS.gene49416:intron 40.0%
AGCCTTCCCAAAATGGTATA+CGG - chr1.2:85139155-85139174 MS.gene49416:intron 40.0%
AGGTGGAATTTGGCAATGAT+GGG - chr1.2:85140522-85140541 MS.gene49416:intron 40.0%
AGTAACAGGAGATAGTGCAA+TGG + chr1.2:85141951-85141970 None:intergenic 40.0%
ATAAAACAAGCCTACCGACA+AGG + chr1.2:85137810-85137829 None:intergenic 40.0%
ATACCTTCGTCAAGAATCCA+TGG + chr1.2:85139181-85139200 None:intergenic 40.0%
ATGAATACAACTTTCTGGGC+AGG + chr1.2:85141091-85141110 None:intergenic 40.0%
CAAACTGAAGTGGAAGACAA+AGG - chr1.2:85142194-85142213 MS.gene49416:CDS 40.0%
CAACCCCAAATACTAGGAAA+AGG - chr1.2:85138862-85138881 MS.gene49416:intron 40.0%
CAAGCATGAAGCAATTGTGA+AGG - chr1.2:85136877-85136896 MS.gene49416:intron 40.0%
CATTGTAGAGAGATACCAAG+TGG - chr1.2:85142108-85142127 MS.gene49416:CDS 40.0%
CATTTACCGAGCTGATTATG+AGG - chr1.2:85136931-85136950 MS.gene49416:intron 40.0%
CTATTTGATGCAGGATGAGA+AGG - chr1.2:85137236-85137255 MS.gene49416:intron 40.0%
CTCCCACAACTTATCTACAA+TGG + chr1.2:85141301-85141320 None:intergenic 40.0%
CTTGCTTAAAGAGAGACCAA+GGG + chr1.2:85141469-85141488 None:intergenic 40.0%
GAAGAAACCAAACAAACCCA+CGG + chr1.2:85136187-85136206 None:intergenic 40.0%
GAAGAAGGGAGATGGAAATA+GGG + chr1.2:85135995-85136014 None:intergenic 40.0%
GAAGTGGTAATTGAGCAGTT+CGG + chr1.2:85139466-85139485 None:intergenic 40.0%
GCACATCTTGCCAATACAAT+TGG - chr1.2:85140581-85140600 MS.gene49416:intron 40.0%
GTTCAAACCTGGATCAATAG+TGG - chr1.2:85138130-85138149 MS.gene49416:intron 40.0%
GTTTAGATTGTCTTATCCGG+TGG + chr1.2:85140992-85141011 None:intergenic 40.0%
TAAAACAAGCCTACCGACAA+GGG + chr1.2:85137809-85137828 None:intergenic 40.0%
TAAACACCGTTTCTTCAGGT+TGG - chr1.2:85138588-85138607 MS.gene49416:intron 40.0%
TAACCTCAAACTGCTGCATA+AGG + chr1.2:85140926-85140945 None:intergenic 40.0%
TAAGATAGAGAGAGATACCC+AGG + chr1.2:85142038-85142057 None:intergenic 40.0%
TACACTGCACTTGATTGGTA+AGG - chr1.2:85138616-85138635 MS.gene49416:intron 40.0%
TACGCTTGAACCAAACGATT+TGG - chr1.2:85140454-85140473 MS.gene49416:intron 40.0%
TAGATACTTCTTCCTCAGAG+AGG - chr1.2:85140502-85140521 MS.gene49416:intron 40.0%
TAGCATAGCTGGCCAATAAA+CGG + chr1.2:85139120-85139139 None:intergenic 40.0%
TCAAGAAGTTGTTGGAGCTT+AGG - chr1.2:85142268-85142287 MS.gene49416:CDS 40.0%
TCACTGCTTCTTTGTTGCAT+TGG - chr1.2:85139915-85139934 MS.gene49416:intron 40.0%
TCCTCTTTCCTTGAAACACA+AGG + chr1.2:85137300-85137319 None:intergenic 40.0%
TCCTGCCAAAATAGTGAAAG+AGG + chr1.2:85140732-85140751 None:intergenic 40.0%
TCCTTGAAACACAAGGCTTA+AGG + chr1.2:85137293-85137312 None:intergenic 40.0%
TCGAGAATATATGCACAGCT+TGG - chr1.2:85141983-85142002 MS.gene49416:intron 40.0%
TGAACAGTCTCTAGTGAATG+TGG + chr1.2:85137546-85137565 None:intergenic 40.0%
TGAATACAACTTTCTGGGCA+GGG + chr1.2:85141090-85141109 None:intergenic 40.0%
TGCAGAAGGAAATGCATTCA+AGG - chr1.2:85140826-85140845 MS.gene49416:CDS 40.0%
TGGTTAAAATGTGGTTAGGG+TGG - chr1.2:85140166-85140185 MS.gene49416:intron 40.0%
TGTCAGCTGTGAGGAATATA+AGG - chr1.2:85136964-85136983 MS.gene49416:intron 40.0%
TTAAAATGTGGTTAGGGTGG+TGG - chr1.2:85140169-85140188 MS.gene49416:intron 40.0%
TTCACTTATGATGTTGGAGC+AGG - chr1.2:85141889-85141908 MS.gene49416:CDS 40.0%
TTCGTCATCATTTGAGGAAG+TGG + chr1.2:85136047-85136066 None:intergenic 40.0%
TTGAAACACAAGGCTTAAGG+TGG + chr1.2:85137290-85137309 None:intergenic 40.0%
TTGACATGCTTTCAGGCTAT+TGG - chr1.2:85139947-85139966 MS.gene49416:CDS 40.0%
TTGCTTAAAGAGAGACCAAG+GGG + chr1.2:85141468-85141487 None:intergenic 40.0%
TTGTAGAGAGATACCAAGTG+GGG - chr1.2:85142110-85142129 MS.gene49416:CDS 40.0%
TTTCCGTTTACACGAGGTAA+AGG - chr1.2:85137401-85137420 MS.gene49416:CDS 40.0%
! ACCTTAAGCCTTGTGTTTCA+AGG - chr1.2:85137289-85137308 MS.gene49416:intron 40.0%
! AGACTTTGGTTAGTCACAGA+AGG + chr1.2:85140337-85140356 None:intergenic 40.0%
! ATAGTCTGAGTCTTGTCACT+CGG + chr1.2:85138208-85138227 None:intergenic 40.0%
! ATCCTAGCAAAGATTGGTTG+AGG + chr1.2:85142167-85142186 None:intergenic 40.0%
! CCTGAACTTTGAAGGAAACT+GGG - chr1.2:85139774-85139793 MS.gene49416:intron 40.0%
! CTTTTTCTGTCTTCCCTTGT+CGG - chr1.2:85137793-85137812 MS.gene49416:intron 40.0%
! GATTTTGTGGTCATACATCC+CGG - chr1.2:85137722-85137741 MS.gene49416:CDS 40.0%
! GGATTTGAGGTGAGAAACAT+TGG + chr1.2:85135966-85135985 None:intergenic 40.0%
! TACGTTTCCATGCCGTTTAT+TGG - chr1.2:85139105-85139124 MS.gene49416:intron 40.0%
! TCCTGAACTTTGAAGGAAAC+TGG - chr1.2:85139773-85139792 MS.gene49416:intron 40.0%
! TGAAAGCATGTCAATCCAAG+TGG + chr1.2:85139941-85139960 None:intergenic 40.0%
! TGCTCCACCCTAAAATTTTG+AGG - chr1.2:85136740-85136759 MS.gene49416:CDS 40.0%
! TTAGGGTGGTGGTATATGAT+TGG - chr1.2:85140180-85140199 MS.gene49416:intron 40.0%
! TTAGTAAATCAGGTTGCTCC+TGG + chr1.2:85138571-85138590 None:intergenic 40.0%
!! ATTTTTGGGGAAGCATGCAT+GGG + chr1.2:85137966-85137985 None:intergenic 40.0%
!! GTTTGGTGTACAGTTCACAA+TGG + chr1.2:85139444-85139463 None:intergenic 40.0%
!! GTTTTGATGCAGCAAGAGAT+CGG - chr1.2:85136583-85136602 MS.gene49416:intron 40.0%
!! TGACGAAGGTATTAGTACTC+GGG - chr1.2:85139189-85139208 MS.gene49416:intron 40.0%
!! TGGTCCTCAAAATTTTAGGG+TGG + chr1.2:85136747-85136766 None:intergenic 40.0%
!!! ACCTCTTTCACTATTTTGGC+AGG - chr1.2:85140728-85140747 MS.gene49416:intron 40.0%
!!! TATTTTTGGGGAAGCATGCA+TGG + chr1.2:85137967-85137986 None:intergenic 40.0%
AACAGGTATGCCCCAATCAA+CGG + chr1.2:85138185-85138204 None:intergenic 45.0%
ACACAAGGCTTAAGGTGGAT+CGG + chr1.2:85137285-85137304 None:intergenic 45.0%
ACCTCGTGTAAACGGAAAGA+TGG + chr1.2:85137399-85137418 None:intergenic 45.0%
ACTGCCTCTCAATCTGATGA+TGG - chr1.2:85137133-85137152 MS.gene49416:intron 45.0%
AGCTCGGTAAATGTCACCAT+TGG + chr1.2:85136924-85136943 None:intergenic 45.0%
AGTTCATCGCACAATTGCAG+CGG + chr1.2:85139393-85139412 None:intergenic 45.0%
ATACTTCTTCCTCAGAGAGG+TGG - chr1.2:85140505-85140524 MS.gene49416:intron 45.0%
ATGAAGATGGGCAAGTCACT+AGG - chr1.2:85140428-85140447 MS.gene49416:intron 45.0%
ATGAGATTGCAATGGTCCGT+AGG + chr1.2:85136360-85136379 None:intergenic 45.0%
ATGCCTTATGCAGCAGTTTG+AGG - chr1.2:85140920-85140939 MS.gene49416:CDS 45.0%
CAACCAGTTAGCACTCCTTA+AGG - chr1.2:85137670-85137689 MS.gene49416:CDS 45.0%
CAACGACTCCTGAACTTTGA+AGG - chr1.2:85139766-85139785 MS.gene49416:intron 45.0%
CACAAGCTTACAAGACGCTT+TGG - chr1.2:85136382-85136401 MS.gene49416:intron 45.0%
CAGCTATGCTAATGTCTGCT+GGG - chr1.2:85139129-85139148 MS.gene49416:intron 45.0%
CATTCAAGGACAATGTAGCG+AGG - chr1.2:85140840-85140859 MS.gene49416:CDS 45.0%
CCCAGTTTCCTTCAAAGTTC+AGG + chr1.2:85139777-85139796 None:intergenic 45.0%
CCTGTTCATGGTTCAGTCAT+GGG - chr1.2:85139308-85139327 MS.gene49416:intron 45.0%
CCTTGCTTAAAGAGAGACCA+AGG + chr1.2:85141470-85141489 None:intergenic 45.0%
CCTTGGTCTCTCTTTAAGCA+AGG - chr1.2:85141467-85141486 MS.gene49416:intron 45.0%
CTGCCTCTCAATCTGATGAT+GGG - chr1.2:85137134-85137153 MS.gene49416:intron 45.0%
GAACAGAACAAACTGACCCT+TGG - chr1.2:85141225-85141244 MS.gene49416:CDS 45.0%
GACAGACACTGTTGCGTTAA+GGG + chr1.2:85136512-85136531 None:intergenic 45.0%
GAGGTGGAATTTGGCAATGA+TGG - chr1.2:85140521-85140540 MS.gene49416:intron 45.0%
GCAATTGTGCGATGAACTGT+CGG - chr1.2:85139395-85139414 MS.gene49416:intron 45.0%
GCATGCTTCCCCAAAAATAG+TGG - chr1.2:85137968-85137987 MS.gene49416:intron 45.0%
GCCTTGTGTTTCAAGGAAAG+AGG - chr1.2:85137296-85137315 MS.gene49416:intron 45.0%
GGCGTTAACGTAGTAAAGAG+GGG + chr1.2:85136086-85136105 None:intergenic 45.0%
GGGCGTTAACGTAGTAAAGA+GGG + chr1.2:85136087-85136106 None:intergenic 45.0%
GGTAATTGAGCAGTTCGGTT+TGG + chr1.2:85139461-85139480 None:intergenic 45.0%
GGTGGAATTTGGCAATGATG+GGG - chr1.2:85140523-85140542 MS.gene49416:intron 45.0%
GTAGGGTTCGTCATCATTTG+AGG + chr1.2:85136053-85136072 None:intergenic 45.0%
GTGGCAGGTGAATTAAACAC+AGG + chr1.2:85140973-85140992 None:intergenic 45.0%
GTGTTTAATTCACCTGCCAC+CGG - chr1.2:85140973-85140992 MS.gene49416:intron 45.0%
TCTACTCGGTAATCTCCATC+TGG - chr1.2:85138914-85138933 MS.gene49416:intron 45.0%
TCTCCCATCATCAGATTGAG+AGG + chr1.2:85137140-85137159 None:intergenic 45.0%
TGAGATTGCAATGGTCCGTA+GGG + chr1.2:85136359-85136378 None:intergenic 45.0%
TGGTCTCTCTTTAAGCAAGG+AGG - chr1.2:85141470-85141489 MS.gene49416:intron 45.0%
TGGTGTGTAAGTACTCCAGA+TGG + chr1.2:85138932-85138951 None:intergenic 45.0%
TGTGCATCTCTAACTTTCCC+TGG - chr1.2:85138281-85138300 MS.gene49416:intron 45.0%
TTCCTCAGAGAGGTGGAATT+TGG - chr1.2:85140512-85140531 MS.gene49416:intron 45.0%
! ACCAATTTGAAGCAGCAACC+TGG - chr1.2:85142017-85142036 MS.gene49416:intron 45.0%
! CAATGATGGGGACTATTCAG+AGG - chr1.2:85140535-85140554 MS.gene49416:intron 45.0%
! CCAATTTGAAGCAGCAACCT+GGG - chr1.2:85142018-85142037 MS.gene49416:intron 45.0%
! CCATGGCCGTATACCATTTT+GGG + chr1.2:85139164-85139183 None:intergenic 45.0%
! CTAACTTCCGTGGGTTTGTT+TGG - chr1.2:85136177-85136196 MS.gene49416:CDS 45.0%
! TCCATGGCCGTATACCATTT+TGG + chr1.2:85139165-85139184 None:intergenic 45.0%
! TCTTTGTTGCATTGGCCACT+TGG - chr1.2:85139923-85139942 MS.gene49416:intron 45.0%
!! AATCCACTGCCAGTGTTGAT+TGG + chr1.2:85140796-85140815 None:intergenic 45.0%
!! CTTAAGGAGTGCTAACTGGT+TGG + chr1.2:85137672-85137691 None:intergenic 45.0%
!! GTTCTGGAGATTGGTAATGC+TGG - chr1.2:85141419-85141438 MS.gene49416:intron 45.0%
!! TATTCGAGAGTGCTTGCCAA+TGG - chr1.2:85136905-85136924 MS.gene49416:intron 45.0%
!!! TATCTTTAAAAAATAATTAT+CGG - chr1.2:85139724-85139743 MS.gene49416:intron 5.0%
AGATTGTCTTATCCGGTGGC+AGG + chr1.2:85140988-85141007 None:intergenic 50.0%
AGCCTCACAAGCTGATGTCA+GGG + chr1.2:85141399-85141418 None:intergenic 50.0%
AGCTGGCCAACCTGAAGAAA+CGG + chr1.2:85138597-85138616 None:intergenic 50.0%
AGGTACCTGAAAGCGAGCAA+TGG + chr1.2:85136152-85136171 None:intergenic 50.0%
ATCAACGGATGCTCGGGAAA+TGG + chr1.2:85138170-85138189 None:intergenic 50.0%
ATCAGCACTAGCTGATGACC+AGG - chr1.2:85138550-85138569 MS.gene49416:intron 50.0%
ATCAGCTTGTGAGGCTGTTC+TGG - chr1.2:85141403-85141422 MS.gene49416:intron 50.0%
ATCGCACAATTGCAGCGGTT+TGG + chr1.2:85139388-85139407 None:intergenic 50.0%
ATGCACAGCTTGGCTATTCC+AGG - chr1.2:85141993-85142012 MS.gene49416:intron 50.0%
ATGCTGAGTAGGCCTGTTCA+TGG - chr1.2:85139296-85139315 MS.gene49416:intron 50.0%
CCAATCAAGTGCAGTGTAGC+TGG + chr1.2:85138614-85138633 None:intergenic 50.0%
CCAGCAGACATTAGCATAGC+TGG + chr1.2:85139131-85139150 None:intergenic 50.0%
CCAGCTACACTGCACTTGAT+TGG - chr1.2:85138611-85138630 MS.gene49416:intron 50.0%
CCAGCTATGCTAATGTCTGC+TGG - chr1.2:85139128-85139147 MS.gene49416:intron 50.0%
CCCAAAATGGTATACGGCCA+TGG - chr1.2:85139161-85139180 MS.gene49416:intron 50.0%
CCCATGACTGAACCATGAAC+AGG + chr1.2:85139311-85139330 None:intergenic 50.0%
CGACAGACACTGTTGCGTTA+AGG + chr1.2:85136513-85136532 None:intergenic 50.0%
CTGGATCAATAGTGGCCTGA+GGG - chr1.2:85138138-85138157 MS.gene49416:intron 50.0%
GAAAATTGCAACTGCTGCCG+TGG - chr1.2:85136320-85136339 MS.gene49416:intron 50.0%
GAACTCAAGCTCGGAGTAAC+AGG + chr1.2:85141965-85141984 None:intergenic 50.0%
GAAGACAAAGGGGTTGCAGT+CGG - chr1.2:85142206-85142225 MS.gene49416:CDS 50.0%
GAGATTGCAATGGTCCGTAG+GGG + chr1.2:85136358-85136377 None:intergenic 50.0%
GAGCATTTGCAGAACAGAGC+TGG + chr1.2:85136025-85136044 None:intergenic 50.0%
GCCATCTTTCCGTTTACACG+AGG - chr1.2:85137395-85137414 MS.gene49416:CDS 50.0%
GCCTGTTCATGGTTCAGTCA+TGG - chr1.2:85139307-85139326 MS.gene49416:intron 50.0%
GGGAAATGGAAAAGTCCCTC+AGG + chr1.2:85138156-85138175 None:intergenic 50.0%
GTCTTGGAGAAGAAGGGAGA+TGG + chr1.2:85136003-85136022 None:intergenic 50.0%
GTTAACGCCCCTCCTCATAT+GGG - chr1.2:85136097-85136116 MS.gene49416:intron 50.0%
TAGAGAGATACCAAGTGGGG+TGG - chr1.2:85142113-85142132 MS.gene49416:CDS 50.0%
TAGCGAGGCTGGTAAAGTCT+AGG - chr1.2:85140855-85140874 MS.gene49416:CDS 50.0%
TAGCTGGCCAATAAACGGCA+TGG + chr1.2:85139115-85139134 None:intergenic 50.0%
TCAACCGTGTGCTCAATGCT+AGG + chr1.2:85139975-85139994 None:intergenic 50.0%
TGCACAGCTTGGCTATTCCA+GGG - chr1.2:85141994-85142013 MS.gene49416:intron 50.0%
TGCCAAATTCCACCTCTCTG+AGG + chr1.2:85140517-85140536 None:intergenic 50.0%
TGGGCTAAGCCTTCCCAAAA+TGG - chr1.2:85139148-85139167 MS.gene49416:intron 50.0%
TTCTGTCTTCCCTTGTCGGT+AGG - chr1.2:85137797-85137816 MS.gene49416:intron 50.0%
TTTCCCGAGCATCCGTTGAT+TGG - chr1.2:85138170-85138189 MS.gene49416:intron 50.0%
! AACACTGGCAGTGGATTCCA+CGG - chr1.2:85140799-85140818 MS.gene49416:CDS 50.0%
! AAGAGGGGTTGTGATGACGT+AGG + chr1.2:85136071-85136090 None:intergenic 50.0%
! ACCAAGTGGGGTGGACTTAA+GGG - chr1.2:85142122-85142141 MS.gene49416:CDS 50.0%
! AGAGGGGTTGTGATGACGTA+GGG + chr1.2:85136070-85136089 None:intergenic 50.0%
! CCCAGGTTGCTGCTTCAAAT+TGG + chr1.2:85142021-85142040 None:intergenic 50.0%
! GATTGGTTGAGGTTGAGCCA+TGG + chr1.2:85142156-85142175 None:intergenic 50.0%
! GGGGCGTTAACGTAGTAAAG+AGG + chr1.2:85136088-85136107 None:intergenic 50.0%
! TACCAAGTGGGGTGGACTTA+AGG - chr1.2:85142121-85142140 MS.gene49416:CDS 50.0%
! TGAGTCTTGTCACTCGGAAC+AGG + chr1.2:85138202-85138221 None:intergenic 50.0%
! TGCTGCTTCAAATTGGTCCC+TGG + chr1.2:85142014-85142033 None:intergenic 50.0%
! TTCCCGAGCATCCGTTGATT+GGG - chr1.2:85138171-85138190 MS.gene49416:intron 50.0%
! TTGCAGAACAGAGCTGGTCT+TGG + chr1.2:85136019-85136038 None:intergenic 50.0%
!! AGAGCTGGTCTTGGAGAAGA+AGG + chr1.2:85136010-85136029 None:intergenic 50.0%
!! ATTACCGGCACCGATGAACA+TGG - chr1.2:85136294-85136313 MS.gene49416:intron 50.0%
!! CGACCTTAAGGAGTGCTAAC+TGG + chr1.2:85137676-85137695 None:intergenic 50.0%
!! GAGCTGGTCTTGGAGAAGAA+GGG + chr1.2:85136009-85136028 None:intergenic 50.0%
!! GGCCGTATACCATTTTGGGA+AGG + chr1.2:85139160-85139179 None:intergenic 50.0%
!! TGTGAGGCTGTTCTGGAGAT+TGG - chr1.2:85141410-85141429 MS.gene49416:intron 50.0%
ACCCTTAAGTCCACCCCACT+TGG + chr1.2:85142126-85142145 None:intergenic 55.0%
ATATGGATGAGCGTGCCCCT+TGG - chr1.2:85141450-85141469 MS.gene49416:intron 55.0%
ATTGCAATGGTCCGTAGGGG+TGG + chr1.2:85136355-85136374 None:intergenic 55.0%
ATTTCCTTCTGCAGCCACCG+TGG + chr1.2:85140819-85140838 None:intergenic 55.0%
CAAGGACAATGTAGCGAGGC+TGG - chr1.2:85140844-85140863 MS.gene49416:CDS 55.0%
CAGCCTCACAAGCTGATGTC+AGG + chr1.2:85141400-85141419 None:intergenic 55.0%
CCTCAGGCCACTATTGATCC+AGG + chr1.2:85138140-85138159 None:intergenic 55.0%
CCTGGATCAATAGTGGCCTG+AGG - chr1.2:85138137-85138156 MS.gene49416:intron 55.0%
CGGCCATGGATTCTTGACGA+AGG - chr1.2:85139175-85139194 MS.gene49416:intron 55.0%
CGTTAACGCCCCTCCTCATA+TGG - chr1.2:85136096-85136115 MS.gene49416:intron 55.0%
CTCACCATGTTCATCGGTGC+CGG + chr1.2:85136301-85136320 None:intergenic 55.0%
CTCCCTGACATCAGCTTGTG+AGG - chr1.2:85141394-85141413 MS.gene49416:intron 55.0%
CTGAAAGCGAGCAATGGCGT+CGG + chr1.2:85136146-85136165 None:intergenic 55.0%
CTGCCAATCAACACTGGCAG+TGG - chr1.2:85140790-85140809 MS.gene49416:CDS 55.0%
GGGAGCTGCCTGTAACACAA+AGG - chr1.2:85141316-85141335 MS.gene49416:CDS 55.0%
TGCCCCAATCAACGGATGCT+CGG + chr1.2:85138177-85138196 None:intergenic 55.0%
! AAGCGCTGCCCATATGAGGA+GGG + chr1.2:85136108-85136127 None:intergenic 55.0%
! AAGTGGGGTGGACTTAAGGG+TGG - chr1.2:85142125-85142144 MS.gene49416:CDS 55.0%
! AGGGGCACGCTCATCCATAT+AGG + chr1.2:85141450-85141469 None:intergenic 55.0%
! GAGTAAGCGCTGCCCATATG+AGG + chr1.2:85136112-85136131 None:intergenic 55.0%
! GGCACCTAGCATTGAGCACA+CGG - chr1.2:85139968-85139987 MS.gene49416:CDS 55.0%
! TAAGCGCTGCCCATATGAGG+AGG + chr1.2:85136109-85136128 None:intergenic 55.0%
! TCCCGAGCATCCGTTGATTG+GGG - chr1.2:85138172-85138191 MS.gene49416:intron 55.0%
! TTGGGGAAGCATGCATGGGT+GGG + chr1.2:85137962-85137981 None:intergenic 55.0%
! TTTGGGGAAGCATGCATGGG+TGG + chr1.2:85137963-85137982 None:intergenic 55.0%
!! TGCTTCTGAAGCAGCTGCCA+AGG - chr1.2:85141496-85141515 MS.gene49416:intron 55.0%
ACTTAAGGGTGGCCAGGCCA+TGG - chr1.2:85142136-85142155 MS.gene49416:CDS 60.0%
AGCGCTGCCCATATGAGGAG+GGG + chr1.2:85136107-85136126 None:intergenic 60.0%
AGGGGTGGAACCTTGAGCCA+CGG + chr1.2:85136340-85136359 None:intergenic 60.0%
CGACGCCATTGCTCGCTTTC+AGG - chr1.2:85136144-85136163 MS.gene49416:intron 60.0%
GATTCCACGGTGGCTGCAGA+AGG - chr1.2:85140812-85140831 MS.gene49416:CDS 60.0%
GCCCCAATCAACGGATGCTC+GGG + chr1.2:85138176-85138195 None:intergenic 60.0%
GGCTCAAGGTTCCACCCCTA+CGG - chr1.2:85136341-85136360 MS.gene49416:intron 60.0%
GTTGAGGTTGAGCCATGGCC+TGG + chr1.2:85142151-85142170 None:intergenic 60.0%
! AAAGCGAGCAATGGCGTCGG+CGG + chr1.2:85136143-85136162 None:intergenic 60.0%
! ACTGGCAGTGGATTCCACGG+TGG - chr1.2:85140802-85140821 MS.gene49416:CDS 60.0%
! TGGGGAAGCATGCATGGGTG+GGG + chr1.2:85137961-85137980 None:intergenic 60.0%
GCAACTGCTGCCGTGGCTCA+AGG - chr1.2:85136327-85136346 MS.gene49416:intron 65.0%
! GGGTGGACTTAAGGGTGGCC+AGG - chr1.2:85142130-85142149 MS.gene49416:CDS 65.0%
!! AATGGCGTCGGCGGCGATGG+TGG + chr1.2:85136134-85136153 None:intergenic 70.0%
!! AGCAATGGCGTCGGCGGCGA+TGG + chr1.2:85136137-85136156 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 85135905 85142289 85135905 ID=MS.gene49416
chr1.2 mRNA 85135905 85142289 85135905 ID=MS.gene49416.t1;Parent=MS.gene49416
chr1.2 exon 85142029 85142289 85142029 ID=MS.gene49416.t1.exon1;Parent=MS.gene49416.t1
chr1.2 CDS 85142029 85142289 85142029 ID=cds.MS.gene49416.t1;Parent=MS.gene49416.t1
chr1.2 exon 85141784 85141927 85141784 ID=MS.gene49416.t1.exon2;Parent=MS.gene49416.t1
chr1.2 CDS 85141784 85141927 85141784 ID=cds.MS.gene49416.t1;Parent=MS.gene49416.t1
chr1.2 exon 85141209 85141358 85141209 ID=MS.gene49416.t1.exon3;Parent=MS.gene49416.t1
chr1.2 CDS 85141209 85141358 85141209 ID=cds.MS.gene49416.t1;Parent=MS.gene49416.t1
chr1.2 exon 85140778 85140945 85140778 ID=MS.gene49416.t1.exon4;Parent=MS.gene49416.t1
chr1.2 CDS 85140778 85140945 85140778 ID=cds.MS.gene49416.t1;Parent=MS.gene49416.t1
chr1.2 exon 85139940 85140064 85139940 ID=MS.gene49416.t1.exon5;Parent=MS.gene49416.t1
chr1.2 CDS 85139940 85140064 85139940 ID=cds.MS.gene49416.t1;Parent=MS.gene49416.t1
chr1.2 exon 85139557 85139650 85139557 ID=MS.gene49416.t1.exon6;Parent=MS.gene49416.t1
chr1.2 CDS 85139557 85139650 85139557 ID=cds.MS.gene49416.t1;Parent=MS.gene49416.t1
chr1.2 exon 85138998 85139096 85138998 ID=MS.gene49416.t1.exon7;Parent=MS.gene49416.t1
chr1.2 CDS 85138998 85139096 85138998 ID=cds.MS.gene49416.t1;Parent=MS.gene49416.t1
chr1.2 exon 85137592 85137772 85137592 ID=MS.gene49416.t1.exon8;Parent=MS.gene49416.t1
chr1.2 CDS 85137592 85137772 85137592 ID=cds.MS.gene49416.t1;Parent=MS.gene49416.t1
chr1.2 exon 85137329 85137444 85137329 ID=MS.gene49416.t1.exon9;Parent=MS.gene49416.t1
chr1.2 CDS 85137329 85137444 85137329 ID=cds.MS.gene49416.t1;Parent=MS.gene49416.t1
chr1.2 exon 85136677 85136832 85136677 ID=MS.gene49416.t1.exon10;Parent=MS.gene49416.t1
chr1.2 CDS 85136677 85136832 85136677 ID=cds.MS.gene49416.t1;Parent=MS.gene49416.t1
chr1.2 exon 85136155 85136283 85136155 ID=MS.gene49416.t1.exon11;Parent=MS.gene49416.t1
chr1.2 CDS 85136155 85136283 85136155 ID=cds.MS.gene49416.t1;Parent=MS.gene49416.t1
chr1.2 exon 85135905 85136078 85135905 ID=MS.gene49416.t1.exon12;Parent=MS.gene49416.t1
chr1.2 CDS 85135905 85136078 85135905 ID=cds.MS.gene49416.t1;Parent=MS.gene49416.t1
Gene Sequence

>MS.gene49416

ATGGCAGTGAGAATGAACTGTTCGTTGCAGAACACACTCTCCATTCTTTCACTTCGTTCCAATGTTTCTCACCTCAAATCCAATAAACCCTATTTCCATCTCCCTTCTTCTCCAAGACCAGCTCTGTTCTGCAAATGCTCCACTTCCTCAAATGATGACGAACCCTACGTCATCACAACCCCTCTTTACTACGTTAACGCCCCTCCTCATATGGGCAGCGCTTACTCCACCATCGCCGCCGACGCCATTGCTCGCTTTCAGGTACCTATTATCTAACTTCCGTGGGTTTGTTTGGTTTCTTCAAAAAAATAAAAGTTATTATCTAACTTTGGAATTTTAACTTATTATATTTAATTTGATAGCGGCTATTGGGAAAGAAAGTTATATTCATTACCGGCACCGATGAACATGGTGAGAAAATTGCAACTGCTGCCGTGGCTCAAGGTTCCACCCCTACGGACCATTGCAATCTCATTTCACAAGCTTACAAGACGCTTTGGAATGATGTAATTCCATTTCATCCCTTAGTAAATCATCGTTATAGTCGTTTATACTGTAAGCCTCATCAATTTAGTCCCTCAAATTTACAAAATTGCTATTTAGTCCCTTAACGCAACAGTGTCTGTCGATTTAGTCATTTTTCAAATTTACCATCACAAGTTTAGAGGTTCTATGCTTGTTTTGATGCAGCAAGAGATCGGCTACTCAAGTAAAACATTAGGTCTTTCCGTGGTTTTGAACTTTTGATACATTTTTAGTAAAGATGGTTTTTAATTGATTGACGTTCTTTGATTTATGGGACTACTTTGCTGTTTCGTAAAATCGAGGACCAAATTGCTCCACCCTAAAATTTTGAGGACCAAAATTTTCATTAACTCTTTTATTCAAGTCTTGTTGATGTGTTTTATTTTTATGAATTTTTTAATTGCAGCTAGATATTTCGTACGATAAGTTCATTAGAACAACAGATAGCAAGCATGAAGCAATTGTGAAGGAATTTTATTCGAGAGTGCTTGCCAATGGTGACATTTACCGAGCTGATTATGAGGGAATTTATTGTGTCAGCTGTGAGGAATATAAGGTGATAGTTTTAACTCGAGGTTCTAACTCTTAGACTGACAATTTTTTCTTTTTAATTTATACAAGATCTTTACTTAGAAGGGTATGATTACTTGCCTCTAGAACTTCAAATAGTTCTATTTACCATCCTTTATTTGGAAGATAGATAACTGCCTCTCAATCTGATGATGGGAGATTTTGATTGAGATTGTTGCCTTTTTTCTTTTAAGTTTCTTATCTTAGTTTCATATTTTTACTTCAAGAATGTATTGCTATTTGATGCAGGATGAGAAGGAACTGCTTGAAAATAATTGTTGTCCGATCCACCTTAAGCCTTGTGTTTCAAGGAAAGAGGACAATTATTTTTTCGCACTGTCAAAATATCAGAAGTCATTGGAGGAAATTTTGAATAAAAATCCAAACTTTGTGCAGCCATCTTTCCGTTTACACGAGGTAAAGGAATATGGAGTTCATATTTGTCTTATCTGTATCGTATAAAAGTTTCCTCTATCTGTTACATTTCTTACATACTGCAATTCAAGCGGGCTACATTGAAATTTACTTTCAGAACTTATTTAACCACATTCACTAGAGACTGTTCAGAATGAAAACTTATATGATTCAAATGGATAGAGTAGGCTAGTCATGATGTCTTAAACTATTTTATATGCTTTTCAAGTCTTGGAGTTCGAGTTCATGACTAATCCAACCAGTTAGCACTCCTTAAGGTCGTGTAACTACATATTTTTCATTAAAATGATTTTGTGGTCATACATCCCGGTATAGAAGATTGTAAAAACCAATAGCATCCAAAATTGATTAACTCTCACTTTTTCTGTCTTCCCTTGTCGGTAGGCTTGTTTTATTACTCTTATTGAGCTTGAAATCTAATTTAATCATTTGGTATGTTAATCCAATCCGAATTCGATCACTTAATGTATGAAAAAAAATACACAAACAATCTGAATTTTGATTTGGCGTGTTTTAAAAACATCCCCACCCATGCATGCTTCCCCAAAAATAGTGGAATAATGCTTTATAGCAGTTTCACCTGTGATATAGGTATTTCACGAACTGCATATCATCTCTTTCAGGAGAACTTCAAATGGGTTTTCTTTAATAATTTATTTGGCTTTAAAAATAATTTCTTCTATATAAATTTCTAGGTTCAAACCTGGATCAATAGTGGCCTGAGGGACTTTTCCATTTCCCGAGCATCCGTTGATTGGGGCATACCTGTTCCGAGTGACAAGACTCAGACTATATATGTATGGTTTGATGCTTTACTAGGGTAAGAGCTTTTATTTTATAATAATTTGTGCATCTCTAACTTTCCCTGGCTCTATTCTATTAGCTTTCAGTTTTTGTTTAACATTATCATTATCATCATCGGTGCTTAACGAAATAAGTTTGTTGAAATACATTTAAGTTCAATTATGCACGATTATTTGTATGGAAAAGTGATAAAGAAAAATTCACACTTCTGCTATATTGTATAATATCTTTCATTGATTGAATTCTCAGTTACCTTACTAAACTCTTGTTGAACACTTTACTTTCCTTTCTTTTTGTATGTGCAGCTACATATCAGCACTAGCTGATGACCAGGAGCAACCTGATTTACTAAACACCGTTTCTTCAGGTTGGCCAGCTACACTGCACTTGATTGGTAAGGTATGTCTCCTCTTTTCTTTCATATTTTTTTTAAATGTCTGTCTCACTCTCTGTGCGAGTGTCTATTTTTAACATATATTTTTTCATTTTCCTTTTCTTTTAAGTGAGAAATATACAATTGTTGTACTCATAACTTGTTAAGGTAGAAGGATGTCGTAATTCCTTTTTATTTTCTATGGTTTGGCTACCATTTTTATCCACTTGTCATAATTCTCTCTTATAGTCAACCCCAAATACTAGGAAAAGGCTATCATGCTTTTTCAGTCAAAATCTCGTTCTACTCGGTAATCTCCATCTGGAGTACTTACACACCAAATCCATCTGTATTTTTGTGATGGTTTTGTTCATCCCTTTATAGTTATTAATCATTGGTTTTCTTTTATGATTAATATTAAAAGAGAAGAAAGAACACCAAAGCATTCAAGTTCATTATTTCATTAATGGTTTTGTTACTCTGTAGGATATTCTACGTTTCCATGCCGTTTATTGGCCAGCTATGCTAATGTCTGCTGGGCTAAGCCTTCCCAAAATGGTATACGGCCATGGATTCTTGACGAAGGTATTAGTACTCGGGCCTATTTATTATCTTATGTTTCTTCTTGAGGTAACTTTGTAGCAAATAGTAACTTCGTTAAATTCCGTCTCTTATTTACAAGAAATGCTGAGTAGGCCTGTTCATGGTTCAGTCATGGGAAAAAAACTGAACTAAACCGTATTGAACTAAAAATATGGTTCATATGAACTGAACCAAACCGCTGCAATTGTGCGATGAACTGTCGGTGAATGTCAAAACCAAACCAAAACCATTGTGAACTGTACACCAAACCGAACTGCTCAATTACCACTTCAGTTTTCAATCATGCAGGAAACAAACGAGAGTGTAGTAGAAACTGAGAACAGAGTCAAAGAAAGTGTTATGAGTACTTACAAAAAAATAAAACGAGAATGCTGCTCGGTTGCCATTCCAATCTCTCATATGTCTGTAAAGTACATTTCATTCCATTTATTGAATTTGGATCTATAATAATATATATAATAATATTATTAATATATTTGAAATTTCTAAATAAAATCACCTAATAGTAGTATCTTTAAAAAATAATTATCGGAAATATACAAAATCAAATTCAACGACTCCTGAACTTTGAAGGAAACTGGGTAACGATTGTGTCAAAATAGGAAACATGACAATGAGATGAGAAATATATACATGTTTAGATTCTTAATTAATATCTGTATTTTTTAGAAGCTTTTAAAAAAAATATAGTTACAGAGCTTCACTGCTTCTTTGTTGCATTGGCCACTTGGATTGACATGCTTTCAGGCTATTGGCACCTAGCATTGAGCACACGGTTGAGAAATGTTGAACTACCTTAATGCTTTATATATTTTTTTACCGTAATGCTTCAAATGTATTCCTTAGAAAATAAGAGCTCAATAACTATACACCAACAGTGTTAGCAAGTTTTATACAAGCGTTAAATCATTTTTCACCATCTTCTACATCATGACATTACTTCTTAAATTCTGGTTAAAATGTGGTTAGGGTGGTGGTATATGATTGGACGTCCTTGTAAACTTGTTAAGATTATCGGTGTATAGTTATTAAACTCAGAAAACAATTATATTTATACTTAACGTCAACAATAGTAAAAGTAATTTGATAGTTGGTATGAAAACTATAAACTAAACTTGGCCTTCTGTGACTAACCAAAGTCTTATAAATCTGTTTCTTATTTAAATTTTATCTCATGCAGCAATGCTTTTTATTTTGAAAATGTTAGGATGGTATGAAGATGGGCAAGTCACTAGGAAATACGCTTGAACCAAACGATTTGGTTAGTAAGTTTGGGACAGATGCAGTTAGATACTTCTTCCTCAGAGAGGTGGAATTTGGCAATGATGGGGACTATTCAGAGGAACGCTTCATCAATATTGTAAATGCACATCTTGCCAATACAATTGGTACTTTGAGCCTTGCTTTCATTGCTTGTAACATTCGTTAACAGCACCTTACTTTCATTGCTTGTAACATTCGCTAACAGCATATTGCTTTTAGTTTTGATTTTTTACTATGATTCTAATGCAAAACCTCTTTCACTATTTTGGCAGGAAATCTTCTTAATAGGACTCTAGGACTTCTGAAAAAGAACTGCCAATCAACACTGGCAGTGGATTCCACGGTGGCTGCAGAAGGAAATGCATTCAAGGACAATGTAGCGAGGCTGGTAAAGTCTAGGAAACTCTAATATTTCTGTAATATCTTTACTAAATTTTAAAGTATGCCTTATGCAGCAGTTTGAGGTTATGCAAACTGTTTCTTCTATTTTGTCCTGTGTTTAATTCACCTGCCACCGGATAAGACAATCTAAACAGATGAAAAGAAGAAAAATATGGTATTCAACTTAGATAGATCGTTTTAGGCTAGTTACAATTCTATCTGTGAGAGCCCTGCCCAGAAAGTTGTATTCATGTTACTCTATTTCATTATTATATTCCTAACAAAAATGAAATAGTTATTTGTTTCGTGTTATAACATGTAACATTAAATTACTAGAATTGTTGTTTTATATTATATTTCGCAATAGAACAGAACAAACTGACCCTTGGATTGTGTTTCTGTAATTGCTAACTTCATATATTTTAAATCCATCTTTCAACCATTGTAGATAAGTTGTGGGAGCTGCCTGTAACACAAAGGTTGATCAATATTTACTTTTGTAGGTTGATAAAGCTCATATGCACTATGAAAATCTCTCCCTGACATCAGCTTGTGAGGCTGTTCTGGAGATTGGTAATGCTGGTAATTCCTATATGGATGAGCGTGCCCCTTGGTCTCTCTTTAAGCAAGGAGGTACTGCTTCTGAAGCAGCTGCCAAGGTATTCTCCTAGAACATATATTACATAAACTTCATACACTAAAATGTTGGTATAAAACTTAATATCGTTAAACAAAAAAGTAACATCATTAGATTAATCAATGTATTTTATTTGCCAATAATATTTGTAGCATTATAAAAGATAGATTCTGTGGTTTGTTTCCACTAAATCTTTACCTGATTGATATTTGATCAAATTAAATCCAAATACTAAACACCTTTTTCTTTTCTCACATTAATCAATTTGCTTTTCATGTATTGTCATCAGCAATTGAACTTTGTTTTTTTCCCTTAACCAAGTATAATAAGCATATTCCATATGTCACTTCTTTTCGTTTGGGTTGAAGATAAGCAAATGCCTAAGAAAGAATTTTCACTTATGATGTTGGAGCAGGACCTTGTAATTATATTAGAGACAGTGAGAATTATTGCCATTGCACTATCTCCTGTTACTCCGAGCTTGAGTTCGAGAATATATGCACAGCTTGGCTATTCCAGGGACCAATTTGAAGCAGCAACCTGGGTATCTCTCTCTATCTTACGCGCACACATACACGAATTCTGTTATAGTGTTTGATTTAAGTTGTTTTGCATTGTAGAGAGATACCAAGTGGGGTGGACTTAAGGGTGGCCAGGCCATGGCTCAACCTCAACCAATCTTTGCTAGGATTGAAAATCAAACTGAAGTGGAAGACAAAGGGGTTGCAGTCGGTAAGAAGACTCTGAAAAGTAAAGGGAAGTCGAAACAAGCTCAAGAAGTTGTTGGAGCTTAG
Protein sequence

>MS.gene49416.t1

MAVRMNCSLQNTLSILSLRSNVSHLKSNKPYFHLPSSPRPALFCKCSTSSNDDEPYVITTPLYYVNAPPHMGSAYSTIAADAIARFQRLLGKKVIFITGTDEHGEKIATAAVAQGSTPTDHCNLISQAYKTLWNDLDISYDKFIRTTDSKHEAIVKEFYSRVLANGDIYRADYEGIYCVSCEEYKDEKELLENNCCPIHLKPCVSRKEDNYFFALSKYQKSLEEILNKNPNFVQPSFRLHEVQTWINSGLRDFSISRASVDWGIPVPSDKTQTIYVWFDALLGYISALADDQEQPDLLNTVSSGWPATLHLIGKDILRFHAVYWPAMLMSAGLSLPKMVYGHGFLTKDGMKMGKSLGNTLEPNDLVSKFGTDAVRYFFLREVEFGNDGDYSEERFINIVNAHLANTIGNLLNRTLGLLKKNCQSTLAVDSTVAAEGNAFKDNVARLVDKAHMHYENLSLTSACEAVLEIGNAGNSYMDERAPWSLFKQGGTASEAAAKDLVIILETVRIIAIALSPVTPSLSSRIYAQLGYSRDQFEAATWRDTKWGGLKGGQAMAQPQPIFARIENQTEVEDKGVAVGKKTLKSKGKSKQAQEVVGA