Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68138.t1 | AEN94095.1 | 100 | 411 | 0 | 0 | 1 | 411 | 61 | 471 | 4.50E-237 | 830.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68138.t1 | P45621 | 92.9 | 411 | 29 | 0 | 1 | 411 | 56 | 466 | 2.3e-226 | 785.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68138.t1 | G4W9I6 | 100.0 | 411 | 0 | 0 | 1 | 411 | 61 | 471 | 3.3e-237 | 830.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene68138 | 0.804197 | 2.42E-49 | -1.69E-46 |
MS.gene049171 | MS.gene68138 | 0.862115 | 6.37E-64 | -1.69E-46 |
MS.gene049173 | MS.gene68138 | 0.8339 | 4.09E-56 | -1.69E-46 |
MS.gene049217 | MS.gene68138 | 0.885657 | 6.73E-72 | -1.69E-46 |
MS.gene049222 | MS.gene68138 | 0.868423 | 6.60E-66 | -1.69E-46 |
MS.gene049232 | MS.gene68138 | 0.80644 | 8.22E-50 | -1.69E-46 |
MS.gene049285 | MS.gene68138 | 0.914063 | 2.97E-84 | -1.69E-46 |
MS.gene049320 | MS.gene68138 | 0.892392 | 1.66E-74 | -1.69E-46 |
MS.gene04939 | MS.gene68138 | 0.809828 | 1.56E-50 | -1.69E-46 |
MS.gene049427 | MS.gene68138 | 0.845271 | 4.51E-59 | -1.69E-46 |
MS.gene049609 | MS.gene68138 | 0.822404 | 2.41E-53 | -1.69E-46 |
MS.gene049614 | MS.gene68138 | 0.809281 | 2.04E-50 | -1.69E-46 |
MS.gene049615 | MS.gene68138 | 0.818772 | 1.65E-52 | -1.69E-46 |
MS.gene049627 | MS.gene68138 | 0.895058 | 1.37E-75 | -1.69E-46 |
MS.gene049633 | MS.gene68138 | 0.812833 | 3.47E-51 | -1.69E-46 |
MS.gene049805 | MS.gene68138 | 0.81664 | 4.98E-52 | -1.69E-46 |
MS.gene05010 | MS.gene68138 | 0.830783 | 2.42E-55 | -1.69E-46 |
MS.gene050163 | MS.gene68138 | 0.930234 | 2.20E-93 | -1.69E-46 |
MS.gene050165 | MS.gene68138 | 0.926969 | 2.25E-91 | -1.69E-46 |
MS.gene050333 | MS.gene68138 | 0.936122 | 2.88E-97 | -1.69E-46 |
MS.gene050353 | MS.gene68138 | -0.81166 | 6.27E-51 | -1.69E-46 |
MS.gene050444 | MS.gene68138 | 0.826721 | 2.32E-54 | -1.69E-46 |
MS.gene050504 | MS.gene68138 | 0.887776 | 1.06E-72 | -1.69E-46 |
MS.gene050518 | MS.gene68138 | 0.903169 | 4.58E-79 | -1.69E-46 |
MS.gene050577 | MS.gene68138 | 0.849001 | 4.28E-60 | -1.69E-46 |
MS.gene050612 | MS.gene68138 | 0.884053 | 2.66E-71 | -1.69E-46 |
MS.gene050675 | MS.gene68138 | 0.869258 | 3.54E-66 | -1.69E-46 |
MS.gene050699 | MS.gene68138 | 0.883772 | 3.38E-71 | -1.69E-46 |
MS.gene050747 | MS.gene68138 | 0.819206 | 1.31E-52 | -1.69E-46 |
MS.gene050767 | MS.gene68138 | 0.859336 | 4.44E-63 | -1.69E-46 |
MS.gene050770 | MS.gene68138 | 0.860669 | 1.76E-63 | -1.69E-46 |
MS.gene050772 | MS.gene68138 | 0.86569 | 4.92E-65 | -1.69E-46 |
MS.gene050781 | MS.gene68138 | 0.83133 | 1.77E-55 | -1.69E-46 |
MS.gene050876 | MS.gene68138 | 0.857339 | 1.75E-62 | -1.69E-46 |
MS.gene05087 | MS.gene68138 | 0.868476 | 6.35E-66 | -1.69E-46 |
MS.gene050904 | MS.gene68138 | 0.832196 | 1.08E-55 | -1.69E-46 |
MS.gene050950 | MS.gene68138 | 0.817332 | 3.48E-52 | -1.69E-46 |
MS.gene050986 | MS.gene68138 | 0.882816 | 7.58E-71 | -1.69E-46 |
MS.gene05100 | MS.gene68138 | 0.895664 | 7.73E-76 | -1.69E-46 |
MS.gene051228 | MS.gene68138 | 0.830035 | 3.68E-55 | -1.69E-46 |
MS.gene051317 | MS.gene68138 | 0.849452 | 3.20E-60 | -1.69E-46 |
MS.gene051434 | MS.gene68138 | 0.821719 | 3.48E-53 | -1.69E-46 |
MS.gene051551 | MS.gene68138 | 0.836071 | 1.16E-56 | -1.69E-46 |
MS.gene051666 | MS.gene68138 | 0.81285 | 3.45E-51 | -1.69E-46 |
MS.gene051694 | MS.gene68138 | 0.854198 | 1.44E-61 | -1.69E-46 |
MS.gene051810 | MS.gene68138 | 0.876391 | 1.45E-68 | -1.69E-46 |
MS.gene051858 | MS.gene68138 | 0.834171 | 3.50E-56 | -1.69E-46 |
MS.gene051949 | MS.gene68138 | 0.875262 | 3.54E-68 | -1.69E-46 |
MS.gene052164 | MS.gene68138 | 0.806209 | 9.19E-50 | -1.69E-46 |
MS.gene052271 | MS.gene68138 | 0.883134 | 5.80E-71 | -1.69E-46 |
MS.gene052379 | MS.gene68138 | 0.864822 | 9.22E-65 | -1.69E-46 |
MS.gene052482 | MS.gene68138 | 0.83329 | 5.81E-56 | -1.69E-46 |
MS.gene052486 | MS.gene68138 | 0.845998 | 2.86E-59 | -1.69E-46 |
MS.gene052605 | MS.gene68138 | 0.804487 | 2.11E-49 | -1.69E-46 |
MS.gene052615 | MS.gene68138 | 0.810713 | 1.01E-50 | -1.69E-46 |
MS.gene052670 | MS.gene68138 | 0.844816 | 5.98E-59 | -1.69E-46 |
MS.gene052872 | MS.gene68138 | 0.806145 | 9.48E-50 | -1.69E-46 |
MS.gene052916 | MS.gene68138 | 0.832667 | 8.29E-56 | -1.69E-46 |
MS.gene053009 | MS.gene68138 | 0.834346 | 3.16E-56 | -1.69E-46 |
MS.gene053107 | MS.gene68138 | 0.815759 | 7.84E-52 | -1.69E-46 |
MS.gene053203 | MS.gene68138 | 0.820219 | 7.70E-53 | -1.69E-46 |
MS.gene053207 | MS.gene68138 | 0.834297 | 3.25E-56 | -1.69E-46 |
MS.gene053213 | MS.gene68138 | 0.88383 | 3.22E-71 | -1.69E-46 |
MS.gene053284 | MS.gene68138 | 0.820254 | 7.56E-53 | -1.69E-46 |
MS.gene053285 | MS.gene68138 | 0.818545 | 1.85E-52 | -1.69E-46 |
MS.gene053286 | MS.gene68138 | 0.883373 | 4.74E-71 | -1.69E-46 |
MS.gene053322 | MS.gene68138 | 0.859749 | 3.33E-63 | -1.69E-46 |
MS.gene053574 | MS.gene68138 | 0.819136 | 1.36E-52 | -1.69E-46 |
MS.gene053632 | MS.gene68138 | 0.846943 | 1.58E-59 | -1.69E-46 |
MS.gene054374 | MS.gene68138 | 0.830992 | 2.15E-55 | -1.69E-46 |
MS.gene054376 | MS.gene68138 | 0.840026 | 1.11E-57 | -1.69E-46 |
MS.gene054595 | MS.gene68138 | 0.821384 | 4.15E-53 | -1.69E-46 |
MS.gene054600 | MS.gene68138 | 0.860887 | 1.51E-63 | -1.69E-46 |
MS.gene054638 | MS.gene68138 | 0.809865 | 1.53E-50 | -1.69E-46 |
MS.gene054642 | MS.gene68138 | 0.903623 | 2.87E-79 | -1.69E-46 |
MS.gene05470 | MS.gene68138 | 0.82104 | 4.99E-53 | -1.69E-46 |
MS.gene054802 | MS.gene68138 | 0.85816 | 9.97E-63 | -1.69E-46 |
MS.gene054803 | MS.gene68138 | 0.859145 | 5.07E-63 | -1.69E-46 |
MS.gene054804 | MS.gene68138 | 0.861373 | 1.07E-63 | -1.69E-46 |
MS.gene054954 | MS.gene68138 | 0.887059 | 1.99E-72 | -1.69E-46 |
MS.gene05505 | MS.gene68138 | 0.806932 | 6.47E-50 | -1.69E-46 |
MS.gene055154 | MS.gene68138 | -0.812723 | 3.67E-51 | -1.69E-46 |
MS.gene055206 | MS.gene68138 | 0.823883 | 1.09E-53 | -1.69E-46 |
MS.gene055333 | MS.gene68138 | -0.807212 | 5.64E-50 | -1.69E-46 |
MS.gene055362 | MS.gene68138 | 0.894898 | 1.60E-75 | -1.69E-46 |
MS.gene055397 | MS.gene68138 | 0.879143 | 1.59E-69 | -1.69E-46 |
MS.gene055499 | MS.gene68138 | 0.868358 | 6.93E-66 | -1.69E-46 |
MS.gene055502 | MS.gene68138 | 0.872326 | 3.47E-67 | -1.69E-46 |
MS.gene055577 | MS.gene68138 | 0.8401 | 1.07E-57 | -1.69E-46 |
MS.gene055634 | MS.gene68138 | 0.87069 | 1.21E-66 | -1.69E-46 |
MS.gene055636 | MS.gene68138 | 0.874909 | 4.67E-68 | -1.69E-46 |
MS.gene055638 | MS.gene68138 | 0.890034 | 1.42E-73 | -1.69E-46 |
MS.gene055647 | MS.gene68138 | 0.860829 | 1.57E-63 | -1.69E-46 |
MS.gene055722 | MS.gene68138 | 0.831497 | 1.61E-55 | -1.69E-46 |
MS.gene055748 | MS.gene68138 | 0.850665 | 1.47E-60 | -1.69E-46 |
MS.gene055750 | MS.gene68138 | 0.836797 | 7.58E-57 | -1.69E-46 |
MS.gene055751 | MS.gene68138 | 0.854572 | 1.13E-61 | -1.69E-46 |
MS.gene05592 | MS.gene68138 | 0.822523 | 2.26E-53 | -1.69E-46 |
MS.gene055941 | MS.gene68138 | 0.830181 | 3.39E-55 | -1.69E-46 |
MS.gene055956 | MS.gene68138 | -0.807645 | 4.57E-50 | -1.69E-46 |
MS.gene056083 | MS.gene68138 | 0.852703 | 3.88E-61 | -1.69E-46 |
MS.gene056374 | MS.gene68138 | 0.873674 | 1.22E-67 | -1.69E-46 |
MS.gene056409 | MS.gene68138 | 0.839325 | 1.70E-57 | -1.69E-46 |
MS.gene056449 | MS.gene68138 | 0.854048 | 1.60E-61 | -1.69E-46 |
MS.gene056450 | MS.gene68138 | 0.837602 | 4.72E-57 | -1.69E-46 |
MS.gene056504 | MS.gene68138 | 0.820366 | 7.12E-53 | -1.69E-46 |
MS.gene056510 | MS.gene68138 | 0.853885 | 1.78E-61 | -1.69E-46 |
MS.gene056549 | MS.gene68138 | 0.863748 | 1.99E-64 | -1.69E-46 |
MS.gene056550 | MS.gene68138 | -0.801074 | 1.07E-48 | -1.69E-46 |
MS.gene056610 | MS.gene68138 | 0.82185 | 3.24E-53 | -1.69E-46 |
MS.gene056657 | MS.gene68138 | 0.90166 | 2.14E-78 | -1.69E-46 |
MS.gene056692 | MS.gene68138 | 0.894473 | 2.39E-75 | -1.69E-46 |
MS.gene056898 | MS.gene68138 | 0.830558 | 2.75E-55 | -1.69E-46 |
MS.gene056903 | MS.gene68138 | 0.800322 | 1.52E-48 | -1.69E-46 |
MS.gene057011 | MS.gene68138 | 0.83626 | 1.04E-56 | -1.69E-46 |
MS.gene057129 | MS.gene68138 | 0.877032 | 8.70E-69 | -1.69E-46 |
MS.gene057146 | MS.gene68138 | 0.816159 | 6.39E-52 | -1.69E-46 |
MS.gene057246 | MS.gene68138 | 0.819474 | 1.14E-52 | -1.69E-46 |
MS.gene057331 | MS.gene68138 | 0.83106 | 2.07E-55 | -1.69E-46 |
MS.gene057416 | MS.gene68138 | 0.870786 | 1.12E-66 | -1.69E-46 |
MS.gene057658 | MS.gene68138 | 0.814335 | 1.62E-51 | -1.69E-46 |
MS.gene057831 | MS.gene68138 | 0.868966 | 4.41E-66 | -1.69E-46 |
MS.gene058019 | MS.gene68138 | 0.84029 | 9.50E-58 | -1.69E-46 |
MS.gene058323 | MS.gene68138 | 0.8338 | 4.33E-56 | -1.69E-46 |
MS.gene058335 | MS.gene68138 | 0.80317 | 3.96E-49 | -1.69E-46 |
MS.gene058419 | MS.gene68138 | 0.895306 | 1.09E-75 | -1.69E-46 |
MS.gene058544 | MS.gene68138 | 0.84763 | 1.02E-59 | -1.69E-46 |
MS.gene058719 | MS.gene68138 | 0.849569 | 2.97E-60 | -1.69E-46 |
MS.gene058723 | MS.gene68138 | 0.843751 | 1.16E-58 | -1.69E-46 |
MS.gene058773 | MS.gene68138 | 0.883476 | 4.34E-71 | -1.69E-46 |
MS.gene058838 | MS.gene68138 | 0.801983 | 6.96E-49 | -1.69E-46 |
MS.gene05883 | MS.gene68138 | 0.831462 | 1.65E-55 | -1.69E-46 |
MS.gene059022 | MS.gene68138 | 0.886022 | 4.91E-72 | -1.69E-46 |
MS.gene059023 | MS.gene68138 | 0.848048 | 7.86E-60 | -1.69E-46 |
MS.gene059029 | MS.gene68138 | 0.883807 | 3.28E-71 | -1.69E-46 |
MS.gene059079 | MS.gene68138 | 0.844591 | 6.88E-59 | -1.69E-46 |
MS.gene059102 | MS.gene68138 | -0.804189 | 2.43E-49 | -1.69E-46 |
MS.gene05912 | MS.gene68138 | 0.814088 | 1.84E-51 | -1.69E-46 |
MS.gene05934 | MS.gene68138 | 0.835238 | 1.89E-56 | -1.69E-46 |
MS.gene059479 | MS.gene68138 | -0.805174 | 1.52E-49 | -1.69E-46 |
MS.gene059536 | MS.gene68138 | 0.819955 | 8.85E-53 | -1.69E-46 |
MS.gene059677 | MS.gene68138 | 0.911886 | 3.66E-83 | -1.69E-46 |
MS.gene059718 | MS.gene68138 | 0.880996 | 3.46E-70 | -1.69E-46 |
MS.gene059756 | MS.gene68138 | 0.884223 | 2.30E-71 | -1.69E-46 |
MS.gene059801 | MS.gene68138 | 0.824697 | 7.01E-54 | -1.69E-46 |
MS.gene059858 | MS.gene68138 | 0.82755 | 1.47E-54 | -1.69E-46 |
MS.gene059865 | MS.gene68138 | 0.828717 | 7.70E-55 | -1.69E-46 |
MS.gene059902 | MS.gene68138 | 0.831766 | 1.39E-55 | -1.69E-46 |
MS.gene059960 | MS.gene68138 | 0.894146 | 3.24E-75 | -1.69E-46 |
MS.gene060193 | MS.gene68138 | 0.832988 | 6.90E-56 | -1.69E-46 |
MS.gene060703 | MS.gene68138 | 0.834568 | 2.78E-56 | -1.69E-46 |
MS.gene060728 | MS.gene68138 | 0.801535 | 8.60E-49 | -1.69E-46 |
MS.gene060762 | MS.gene68138 | 0.867642 | 1.18E-65 | -1.69E-46 |
MS.gene06077 | MS.gene68138 | 0.868912 | 4.59E-66 | -1.69E-46 |
MS.gene060818 | MS.gene68138 | 0.800439 | 1.44E-48 | -1.69E-46 |
MS.gene06092 | MS.gene68138 | 0.843723 | 1.18E-58 | -1.69E-46 |
MS.gene060982 | MS.gene68138 | 0.809695 | 1.67E-50 | -1.69E-46 |
MS.gene06105 | MS.gene68138 | 0.802204 | 6.27E-49 | -1.69E-46 |
MS.gene061134 | MS.gene68138 | 0.840263 | 9.66E-58 | -1.69E-46 |
MS.gene061150 | MS.gene68138 | 0.913935 | 3.45E-84 | -1.69E-46 |
MS.gene061171 | MS.gene68138 | 0.892866 | 1.07E-74 | -1.69E-46 |
MS.gene061200 | MS.gene68138 | 0.899782 | 1.41E-77 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene68138 | MS.gene02808 | PPI |
MS.gene68138 | MS.gene027936 | PPI |
MS.gene68138 | MS.gene78935 | PPI |
MS.gene68138 | MS.gene23898 | PPI |
MS.gene68138 | MS.gene051306 | PPI |
MS.gene68138 | MS.gene027928 | PPI |
MS.gene68138 | MS.gene002503 | PPI |
MS.gene68138 | MS.gene97715 | PPI |
MS.gene68138 | MS.gene01476 | PPI |
MS.gene68138 | MS.gene047358 | PPI |
MS.gene68138 | MS.gene23896 | PPI |
MS.gene68138 | MS.gene004173 | PPI |
MS.gene68138 | MS.gene027931 | PPI |
MS.gene68138 | MS.gene051310 | PPI |
MS.gene68138 | MS.gene027933 | PPI |
MS.gene68138 | MS.gene97720 | PPI |
MS.gene68138 | MS.gene051305 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68138.t1 | MTR_3g118070 | 99.270 | 411 | 3 | 0 | 1 | 411 | 58 | 468 | 0.0 | 838 |
MS.gene68138.t1 | MTR_3g118070 | 99.270 | 411 | 3 | 0 | 1 | 411 | 1 | 411 | 0.0 | 833 |
MS.gene68138.t1 | MTR_7g451450 | 34.448 | 299 | 169 | 10 | 19 | 304 | 87 | 371 | 8.03e-34 | 132 |
MS.gene68138.t1 | MTR_7g072420 | 27.946 | 297 | 197 | 8 | 19 | 303 | 83 | 374 | 6.31e-21 | 95.1 |
MS.gene68138.t1 | MTR_3g465800 | 27.759 | 299 | 197 | 7 | 18 | 303 | 74 | 366 | 6.48e-19 | 89.0 |
MS.gene68138.t1 | MTR_3g465800 | 28.179 | 291 | 190 | 7 | 26 | 303 | 11 | 295 | 8.58e-19 | 87.8 |
MS.gene68138.t1 | MTR_8g091660 | 25.373 | 335 | 219 | 11 | 18 | 334 | 82 | 403 | 1.78e-17 | 84.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68138.t1 | AT3G48730 | 84.672 | 411 | 63 | 0 | 1 | 411 | 62 | 472 | 0.0 | 736 |
MS.gene68138.t1 | AT5G63570 | 82.725 | 411 | 71 | 0 | 1 | 411 | 64 | 474 | 0.0 | 718 |
MS.gene68138.t1 | AT5G63570 | 82.725 | 411 | 71 | 0 | 1 | 411 | 1 | 411 | 0.0 | 714 |
MS.gene68138.t1 | AT5G46180 | 28.882 | 322 | 204 | 8 | 19 | 327 | 59 | 368 | 2.31e-30 | 122 |
MS.gene68138.t1 | AT1G80600 | 29.773 | 309 | 170 | 10 | 19 | 304 | 77 | 361 | 6.22e-26 | 109 |
MS.gene68138.t1 | AT3G08860 | 26.667 | 315 | 206 | 11 | 19 | 317 | 83 | 388 | 2.90e-20 | 92.8 |
MS.gene68138.t1 | AT3G08860 | 26.667 | 315 | 206 | 11 | 19 | 317 | 83 | 388 | 3.29e-20 | 92.8 |
MS.gene68138.t1 | AT4G39660 | 25.519 | 337 | 216 | 11 | 18 | 334 | 77 | 398 | 9.39e-20 | 91.7 |
MS.gene68138.t1 | AT4G39660 | 25.538 | 325 | 207 | 11 | 30 | 334 | 14 | 323 | 1.27e-19 | 90.5 |
MS.gene68138.t1 | AT2G38400 | 25.444 | 338 | 214 | 10 | 18 | 334 | 79 | 399 | 1.73e-16 | 81.6 |
MS.gene68138.t1 | AT2G38400 | 25.444 | 338 | 214 | 10 | 18 | 334 | 79 | 399 | 2.08e-16 | 81.3 |
Find 142 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAAGTTTGCTAAGTTCTTC+TGG | 0.125787 | 3.1:+92839983 | MS.gene68138:CDS |
TCTTGGGGTCCTGCAATTAT+TGG | 0.214742 | 3.1:+92838947 | MS.gene68138:CDS |
TGGAGGTAGGAGAGATATTA+TGG | 0.268158 | 3.1:+92839684 | MS.gene68138:CDS |
TTTGACGGAATCAATGATAA+TGG | 0.275446 | 3.1:-92838873 | None:intergenic |
CATTGACTATGTTGGTTCTT+GGG | 0.275476 | 3.1:+92838931 | MS.gene68138:CDS |
GTTTCATTGGTGGCAGCTTT+AGG | 0.281598 | 3.1:-92839361 | None:intergenic |
CTGCTGCTGAGAAGGTCTTT+AGG | 0.282740 | 3.1:+92840103 | MS.gene68138:CDS |
TGCTGCTGAGAAGGTCTTTA+GGG | 0.286640 | 3.1:+92840104 | MS.gene68138:CDS |
CTTGATGATCTTCTCTTTGC+CGG | 0.295779 | 3.1:-92839245 | None:intergenic |
CGCAAGGAACTAAGAAAATC+AGG | 0.299535 | 3.1:-92839505 | None:intergenic |
ATATGTGGTGGGCATATAAA+TGG | 0.309935 | 3.1:+92839892 | MS.gene68138:CDS |
TTCCCCAGAGTTGTTATATC+AGG | 0.310573 | 3.1:-92839628 | None:intergenic |
ACATTGACTATGTTGGTTCT+TGG | 0.314847 | 3.1:+92838930 | MS.gene68138:CDS |
CAAGTTTGCTAAGTTCTTCT+GGG | 0.335783 | 3.1:+92839984 | MS.gene68138:CDS |
AGAAACTCTGAAGCGTATTA+AGG | 0.338134 | 3.1:+92839783 | MS.gene68138:CDS |
GAACCTGTTGTTGGAAATTC+CGG | 0.340485 | 3.1:+92839466 | MS.gene68138:CDS |
GTTAGCAGAAGGTGTCTATT+TGG | 0.340874 | 3.1:+92840011 | MS.gene68138:CDS |
GAATACTTGGACAAAATTAC+AGG | 0.342820 | 3.1:+92839820 | MS.gene68138:CDS |
ATGGTCAGATTTGTCAATTC+CGG | 0.345817 | 3.1:+92839178 | MS.gene68138:CDS |
GGCATATAAATGGGATGTTT+GGG | 0.350134 | 3.1:+92839902 | MS.gene68138:CDS |
GGGCATATAAATGGGATGTT+TGG | 0.352503 | 3.1:+92839901 | MS.gene68138:CDS |
GCACCTTCACAGTTTGAGGC+TGG | 0.354758 | 3.1:+92840033 | MS.gene68138:CDS |
TCCAAGTATTCATAAGTTCC+TGG | 0.359322 | 3.1:-92839808 | None:intergenic |
TTAGGAACACCAGGGGAATC+AGG | 0.388149 | 3.1:-92839343 | None:intergenic |
TTTGGCACCTTCACAGTTTG+AGG | 0.388856 | 3.1:+92840029 | MS.gene68138:CDS |
GGCTGTAAGGGTTTCATTGG+TGG | 0.391375 | 3.1:-92839371 | None:intergenic |
GAACTAAGAAAATCAGGTTT+AGG | 0.397600 | 3.1:-92839499 | None:intergenic |
TACGGCTATCTCTCCTTTGT+TGG | 0.403214 | 3.1:-92839434 | None:intergenic |
TATTGGTCACGCTGATGATC+AGG | 0.409676 | 3.1:+92838964 | MS.gene68138:CDS |
TTGACGGAATCAATGATAAT+GGG | 0.415140 | 3.1:-92838872 | None:intergenic |
TGCTGTTCCCAGCATTGAAA+TGG | 0.417543 | 3.1:+92839159 | MS.gene68138:CDS |
CCAGAAGAACTTAGCAAACT+TGG | 0.420091 | 3.1:-92839983 | None:intergenic |
TTTCTTGTTAAGGCAGGTAG+TGG | 0.428022 | 3.1:+92839301 | MS.gene68138:CDS |
ATGAAGAAAGGAACCAGCTT+TGG | 0.429438 | 3.1:+92839091 | MS.gene68138:CDS |
GACGTTGAGTGGGAATCCTT+TGG | 0.430505 | 3.1:+92839744 | MS.gene68138:CDS |
GTCTTCCTCGAACCTGTTGT+TGG | 0.431603 | 3.1:+92839457 | MS.gene68138:CDS |
CACCTTCACAGTTTGAGGCT+GGG | 0.433643 | 3.1:+92840034 | MS.gene68138:CDS |
CTACCTGCCTTAACAAGAAA+AGG | 0.436782 | 3.1:-92839298 | None:intergenic |
GGTTTGCCAGTAGGTGCATA+TGG | 0.445263 | 3.1:+92839664 | MS.gene68138:CDS |
AAACCGGAATTTCCAACAAC+AGG | 0.445497 | 3.1:-92839469 | None:intergenic |
ACAACTCTGGGGAAGATCAT+TGG | 0.450763 | 3.1:+92839637 | MS.gene68138:CDS |
CCACATGCGAGCACCTTTGA+CGG | 0.452870 | 3.1:-92838888 | None:intergenic |
ACTGGATTCCGTTTGTCGTA+TGG | 0.457113 | 3.1:+92839577 | MS.gene68138:CDS |
TCAGCGTGACCAATAATTGC+AGG | 0.459493 | 3.1:-92838956 | None:intergenic |
ATTGACTATGTTGGTTCTTG+GGG | 0.459541 | 3.1:+92838932 | MS.gene68138:CDS |
TGAGGCTGGGTTCACCAGCT+TGG | 0.460390 | 3.1:+92840047 | MS.gene68138:CDS |
AAATCTGACCATTTCAATGC+TGG | 0.463786 | 3.1:-92839167 | None:intergenic |
CGCCTTGCCCGTGCTTATAC+CGG | 0.463976 | 3.1:+92839226 | MS.gene68138:CDS |
AACTCCTGATATAACAACTC+TGG | 0.465327 | 3.1:+92839624 | MS.gene68138:CDS |
CAGGGGAATCAGGAAGTCCT+AGG | 0.466845 | 3.1:-92839333 | None:intergenic |
TTTGATTAGGAATTGATGCC+TGG | 0.467656 | 3.1:+92838803 | None:intergenic |
ATTATCATTGATTCCGTCAA+AGG | 0.468261 | 3.1:+92838875 | MS.gene68138:CDS |
ACTCCTGATATAACAACTCT+GGG | 0.468947 | 3.1:+92839625 | MS.gene68138:CDS |
ATGGAGACCGTGGCTCCGGC+TGG | 0.468994 | 3.1:+92839703 | MS.gene68138:CDS |
AGAGAAGATCATCAAGTTTG+AGG | 0.471292 | 3.1:+92839252 | MS.gene68138:CDS |
ATTACAGGTGAGCTTGTTCA+AGG | 0.477356 | 3.1:+92839835 | MS.gene68138:CDS |
AAGACAAGGTGCACCAAAGC+TGG | 0.477394 | 3.1:-92839104 | None:intergenic |
TTCCGGCACTGAAGCATGCA+TGG | 0.479996 | 3.1:+92839195 | MS.gene68138:CDS |
GAGAAGATCATCAAGTTTGA+GGG | 0.481387 | 3.1:+92839253 | MS.gene68138:CDS |
GACCATTGCTGCTGCTGAGA+AGG | 0.485730 | 3.1:+92840095 | MS.gene68138:CDS |
CTCTTTGCCGGTATAAGCAC+GGG | 0.486208 | 3.1:-92839233 | None:intergenic |
GTTCAAGGCATTGTTGAAGC+TGG | 0.489925 | 3.1:+92839850 | MS.gene68138:CDS |
AACCAACATAGTCAATGTAT+TGG | 0.491453 | 3.1:-92838925 | None:intergenic |
ACTGATTTGAAAGCACGAAC+AGG | 0.495762 | 3.1:-92838839 | None:intergenic |
GTGTTTGATGAAGTTATGAC+TGG | 0.497336 | 3.1:+92839559 | MS.gene68138:CDS |
GCCAGGAACTTATGAATACT+TGG | 0.499909 | 3.1:+92839807 | MS.gene68138:CDS |
GCTGGACCTATGTACCAGGC+TGG | 0.502027 | 3.1:+92839721 | MS.gene68138:CDS |
AACAGCAGCAAAGTCATTGA+AGG | 0.503512 | 3.1:-92839395 | None:intergenic |
AATCCTTTGGCAATGACTGC+AGG | 0.505080 | 3.1:+92839757 | MS.gene68138:CDS |
GTTCGTGCTTTCAAATCAGT+TGG | 0.507920 | 3.1:+92838842 | MS.gene68138:CDS |
GAGCACCTCCATACGACAAA+CGG | 0.508625 | 3.1:-92839585 | None:intergenic |
GTTGAAGCTGGTAAGAAGGC+AGG | 0.509704 | 3.1:+92839862 | MS.gene68138:CDS |
AACCAATACATTGACTATGT+TGG | 0.510475 | 3.1:+92838923 | MS.gene68138:CDS |
ACAGGAGAGTTCACACCTCC+AGG | 0.510938 | 3.1:-92838821 | None:intergenic |
TATTATGGAGACCGTGGCTC+CGG | 0.513114 | 3.1:+92839699 | MS.gene68138:CDS |
AACGTCCCAGCCTGGTACAT+AGG | 0.518158 | 3.1:-92839727 | None:intergenic |
GCCTGGTACATAGGTCCAGC+CGG | 0.518203 | 3.1:-92839718 | None:intergenic |
TTCTGGGGTATGTTAGCAGA+AGG | 0.519712 | 3.1:+92840000 | MS.gene68138:CDS |
GACCTTCTCAGCAGCAGCAA+TGG | 0.522852 | 3.1:-92840097 | None:intergenic |
CTAGGACTTCCTGATTCCCC+TGG | 0.524552 | 3.1:+92839334 | MS.gene68138:CDS |
TGAAAACACTCTAGCTGAGA+TGG | 0.530589 | 3.1:+92839129 | MS.gene68138:CDS |
ACCCATGCATGCTTCAGTGC+CGG | 0.530882 | 3.1:-92839197 | None:intergenic |
CTACCTCCATATGCACCTAC+TGG | 0.530999 | 3.1:-92839670 | None:intergenic |
CGTGCTTTCAAATCAGTTGG+TGG | 0.531486 | 3.1:+92838845 | MS.gene68138:CDS |
CCGTCAAAGGTGCTCGCATG+TGG | 0.532480 | 3.1:+92838888 | MS.gene68138:CDS |
TACCAGGCTGGGACGTTGAG+TGG | 0.532692 | 3.1:+92839733 | MS.gene68138:CDS |
GAGAAGGGCATTGTTCTCCT+TGG | 0.539822 | 3.1:-92839536 | None:intergenic |
CATTGTTGAAGCTGGTAAGA+AGG | 0.540418 | 3.1:+92839858 | MS.gene68138:CDS |
AGGTTTAGGAGTAATGAAAC+CGG | 0.540434 | 3.1:-92839485 | None:intergenic |
GGAGGTGCTCAACAATACTT+TGG | 0.540803 | 3.1:+92839598 | MS.gene68138:CDS |
CTGAAGCGTATTAAGGAGCC+AGG | 0.542721 | 3.1:+92839790 | MS.gene68138:CDS |
CTGGACCTATGTACCAGGCT+GGG | 0.542962 | 3.1:+92839722 | MS.gene68138:CDS |
AATTTCCAACAACAGGTTCG+AGG | 0.544211 | 3.1:-92839462 | None:intergenic |
TGCCGGTATAAGCACGGGCA+AGG | 0.545023 | 3.1:-92839228 | None:intergenic |
ATCAGAAGTATGTGCCAAGC+TGG | 0.549286 | 3.1:-92840061 | None:intergenic |
TCCGGCTGGACCTATGTACC+AGG | 0.550164 | 3.1:+92839717 | MS.gene68138:CDS |
AATCTGACCATTTCAATGCT+GGG | 0.551104 | 3.1:-92839166 | None:intergenic |
GCTCGCATGTGGGACATTGA+TGG | 0.552562 | 3.1:+92838899 | MS.gene68138:CDS |
GGTAGTGGAGTTGCCACCCT+AGG | 0.552592 | 3.1:+92839316 | MS.gene68138:CDS |
TCCCACTCAACGTCCCAGCC+TGG | 0.554590 | 3.1:-92839735 | None:intergenic |
CTTGCTGAGACAATGAAGAA+AGG | 0.555611 | 3.1:+92839079 | MS.gene68138:CDS |
TCTCTTTGCCGGTATAAGCA+CGG | 0.568722 | 3.1:-92839234 | None:intergenic |
CATAGGTCCAGCCGGAGCCA+CGG | 0.570397 | 3.1:-92839710 | None:intergenic |
GTGGCAGCTTTAGGAACACC+AGG | 0.571077 | 3.1:-92839352 | None:intergenic |
ACAGCAGCAAAGTCATTGAA+GGG | 0.578728 | 3.1:-92839394 | None:intergenic |
GCAGGGCATGCAATATGTGG+TGG | 0.581592 | 3.1:+92839880 | MS.gene68138:CDS |
TATGTGGTGGGCATATAAAT+GGG | 0.582602 | 3.1:+92839893 | MS.gene68138:CDS |
AAGTTTGCTAAGTTCTTCTG+GGG | 0.584115 | 3.1:+92839985 | MS.gene68138:CDS |
TAACTTCATCAAACACGAGA+AGG | 0.585499 | 3.1:-92839552 | None:intergenic |
TTGAAGCTGGTAAGAAGGCA+GGG | 0.585619 | 3.1:+92839863 | MS.gene68138:CDS |
AGGGGAATCAGGAAGTCCTA+GGG | 0.587377 | 3.1:-92839332 | None:intergenic |
GGATTCCGTTTGTCGTATGG+AGG | 0.588634 | 3.1:+92839580 | MS.gene68138:CDS |
AAGTTTGAGGGATGTTATCA+CGG | 0.591307 | 3.1:+92839265 | MS.gene68138:CDS |
AAGGCAGGGCATGCAATATG+TGG | 0.593656 | 3.1:+92839877 | MS.gene68138:CDS |
CTTCATTGTCTCAGCAAGAG+CGG | 0.594962 | 3.1:-92839074 | None:intergenic |
ATGCCTGCAGTCATTGCCAA+AGG | 0.596171 | 3.1:-92839760 | None:intergenic |
ACTCTGGGGAAGATCATTGG+AGG | 0.600178 | 3.1:+92839640 | MS.gene68138:CDS |
CAGTAGGTGCATATGGAGGT+AGG | 0.601307 | 3.1:+92839671 | MS.gene68138:CDS |
TCCGGCACTGAAGCATGCAT+GGG | 0.605633 | 3.1:+92839196 | MS.gene68138:CDS |
CAGGGCATGCAATATGTGGT+GGG | 0.605835 | 3.1:+92839881 | MS.gene68138:CDS |
ACCAGGCTGGGACGTTGAGT+GGG | 0.609650 | 3.1:+92839734 | MS.gene68138:CDS |
CTGGGGAAGATCATTGGAGG+GGG | 0.612965 | 3.1:+92839643 | MS.gene68138:CDS |
AACTTCATCAAACACGAGAA+GGG | 0.614126 | 3.1:-92839551 | None:intergenic |
AACAGGTTCGAGGAAGACTA+CGG | 0.621214 | 3.1:-92839452 | None:intergenic |
CGTCAAAGGTGCTCGCATGT+GGG | 0.625959 | 3.1:+92838889 | MS.gene68138:CDS |
AACCCAGCCTCAAACTGTGA+AGG | 0.634803 | 3.1:-92840036 | None:intergenic |
AAGATCTTTGAAGCCAACAA+AGG | 0.638698 | 3.1:+92839421 | MS.gene68138:CDS |
GCATCTGTGAAATTGTACAC+AGG | 0.641026 | 3.1:-92839943 | None:intergenic |
GGAATCAGGAAGTCCTAGGG+TGG | 0.643441 | 3.1:-92839329 | None:intergenic |
CGGTATAAGCACGGGCAAGG+CGG | 0.653099 | 3.1:-92839225 | None:intergenic |
CAGCAGCAAAGTCATTGAAG+GGG | 0.654908 | 3.1:-92839393 | None:intergenic |
GAGAGATATTATGGAGACCG+TGG | 0.661183 | 3.1:+92839693 | MS.gene68138:CDS |
TCTGGGGAAGATCATTGGAG+GGG | 0.662523 | 3.1:+92839642 | MS.gene68138:CDS |
AGCAGCAAAGTCATTGAAGG+GGG | 0.664856 | 3.1:-92839392 | None:intergenic |
CTCTGGGGAAGATCATTGGA+GGG | 0.675119 | 3.1:+92839641 | MS.gene68138:CDS |
TAACAAGAAAAGGATCAGCA+TGG | 0.678181 | 3.1:-92839288 | None:intergenic |
TTCCTTGCGCAAAATCACCA+AGG | 0.686509 | 3.1:+92839519 | MS.gene68138:CDS |
TTGCCAGTAGGTGCATATGG+AGG | 0.697062 | 3.1:+92839667 | MS.gene68138:CDS |
GGCAGCTTTAGGAACACCAG+GGG | 0.703847 | 3.1:-92839350 | None:intergenic |
TGGCAGCTTTAGGAACACCA+GGG | 0.708271 | 3.1:-92839351 | None:intergenic |
GATTAGGAATTGATGCCTGG+AGG | 0.717601 | 3.1:+92838806 | None:intergenic |
CTCCTGATATAACAACTCTG+GGG | 0.744293 | 3.1:+92839626 | MS.gene68138:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTAAACATAAAGTTTGA+AGG | - | chr3.1:92839044-92839063 | None:intergenic | 15.0% |
!!! | CAAACTTTATGTTTAATTTC+AGG | + | chr3.1:92839045-92839064 | MS.gene68138:intron | 20.0% |
! | AATATATGAGAGAATTGAAG+AGG | - | chr3.1:92839009-92839028 | None:intergenic | 25.0% |
AACCAACATAGTCAATGTAT+TGG | - | chr3.1:92838928-92838947 | None:intergenic | 30.0% | |
GAACTAAGAAAATCAGGTTT+AGG | - | chr3.1:92839502-92839521 | None:intergenic | 30.0% | |
GAATACTTGGACAAAATTAC+AGG | + | chr3.1:92839820-92839839 | MS.gene68138:CDS | 30.0% | |
TTGACGGAATCAATGATAAT+GGG | - | chr3.1:92838875-92838894 | None:intergenic | 30.0% | |
TTTGACGGAATCAATGATAA+TGG | - | chr3.1:92838876-92838895 | None:intergenic | 30.0% | |
! | AACCAATACATTGACTATGT+TGG | + | chr3.1:92838923-92838942 | MS.gene68138:CDS | 30.0% |
!! | ATTATCATTGATTCCGTCAA+AGG | + | chr3.1:92838875-92838894 | MS.gene68138:CDS | 30.0% |
AAATCTGACCATTTCAATGC+TGG | - | chr3.1:92839170-92839189 | None:intergenic | 35.0% | |
AACTCCTGATATAACAACTC+TGG | + | chr3.1:92839624-92839643 | MS.gene68138:CDS | 35.0% | |
AACTTCATCAAACACGAGAA+GGG | - | chr3.1:92839554-92839573 | None:intergenic | 35.0% | |
AAGTTTGAGGGATGTTATCA+CGG | + | chr3.1:92839265-92839284 | MS.gene68138:CDS | 35.0% | |
AATCTGACCATTTCAATGCT+GGG | - | chr3.1:92839169-92839188 | None:intergenic | 35.0% | |
ACTCCTGATATAACAACTCT+GGG | + | chr3.1:92839625-92839644 | MS.gene68138:CDS | 35.0% | |
AGAGAAGATCATCAAGTTTG+AGG | + | chr3.1:92839252-92839271 | MS.gene68138:CDS | 35.0% | |
AGGTTTAGGAGTAATGAAAC+CGG | - | chr3.1:92839488-92839507 | None:intergenic | 35.0% | |
ATGGTCAGATTTGTCAATTC+CGG | + | chr3.1:92839178-92839197 | MS.gene68138:CDS | 35.0% | |
GAGAAGATCATCAAGTTTGA+GGG | + | chr3.1:92839253-92839272 | MS.gene68138:CDS | 35.0% | |
GGCATATAAATGGGATGTTT+GGG | + | chr3.1:92839902-92839921 | MS.gene68138:CDS | 35.0% | |
GTGTTTGATGAAGTTATGAC+TGG | + | chr3.1:92839559-92839578 | MS.gene68138:CDS | 35.0% | |
TAACAAGAAAAGGATCAGCA+TGG | - | chr3.1:92839291-92839310 | None:intergenic | 35.0% | |
TAACTTCATCAAACACGAGA+AGG | - | chr3.1:92839555-92839574 | None:intergenic | 35.0% | |
TCCAAGTATTCATAAGTTCC+TGG | - | chr3.1:92839811-92839830 | None:intergenic | 35.0% | |
! | TGCTGATCCTTTTCTTGTTA+AGG | + | chr3.1:92839291-92839310 | MS.gene68138:CDS | 35.0% |
!! | AAGATCTTTGAAGCCAACAA+AGG | + | chr3.1:92839421-92839440 | MS.gene68138:CDS | 35.0% |
!! | AAGTTTGCTAAGTTCTTCTG+GGG | + | chr3.1:92839985-92840004 | MS.gene68138:CDS | 35.0% |
!! | ACATTGACTATGTTGGTTCT+TGG | + | chr3.1:92838930-92838949 | MS.gene68138:CDS | 35.0% |
!! | AGAAACTCTGAAGCGTATTA+AGG | + | chr3.1:92839783-92839802 | MS.gene68138:CDS | 35.0% |
!! | AGAGTGTTTTCAAGAAGACA+AGG | - | chr3.1:92839121-92839140 | None:intergenic | 35.0% |
!! | ATATGTGGTGGGCATATAAA+TGG | + | chr3.1:92839892-92839911 | MS.gene68138:CDS | 35.0% |
!! | ATTGACTATGTTGGTTCTTG+GGG | + | chr3.1:92838932-92838951 | MS.gene68138:CDS | 35.0% |
!! | CAAGTTTGCTAAGTTCTTCT+GGG | + | chr3.1:92839984-92840003 | MS.gene68138:CDS | 35.0% |
!! | CATTGACTATGTTGGTTCTT+GGG | + | chr3.1:92838931-92838950 | MS.gene68138:CDS | 35.0% |
!! | TATGTGGTGGGCATATAAAT+GGG | + | chr3.1:92839893-92839912 | MS.gene68138:CDS | 35.0% |
!! | TTTGGGTTTTTCTTCACAGA+AGG | + | chr3.1:92839919-92839938 | MS.gene68138:CDS | 35.0% |
AAACCGGAATTTCCAACAAC+AGG | - | chr3.1:92839472-92839491 | None:intergenic | 40.0% | |
AACAGCAGCAAAGTCATTGA+AGG | - | chr3.1:92839398-92839417 | None:intergenic | 40.0% | |
AATTTCCAACAACAGGTTCG+AGG | - | chr3.1:92839465-92839484 | None:intergenic | 40.0% | |
ACAGCAGCAAAGTCATTGAA+GGG | - | chr3.1:92839397-92839416 | None:intergenic | 40.0% | |
ATGAAGAAAGGAACCAGCTT+TGG | + | chr3.1:92839091-92839110 | MS.gene68138:CDS | 40.0% | |
CATTGTTGAAGCTGGTAAGA+AGG | + | chr3.1:92839858-92839877 | MS.gene68138:CDS | 40.0% | |
CCAGAAGAACTTAGCAAACT+TGG | - | chr3.1:92839986-92840005 | None:intergenic | 40.0% | |
CGCAAGGAACTAAGAAAATC+AGG | - | chr3.1:92839508-92839527 | None:intergenic | 40.0% | |
CTACCTGCCTTAACAAGAAA+AGG | - | chr3.1:92839301-92839320 | None:intergenic | 40.0% | |
CTCCTGATATAACAACTCTG+GGG | + | chr3.1:92839626-92839645 | MS.gene68138:CDS | 40.0% | |
CTTGCTGAGACAATGAAGAA+AGG | + | chr3.1:92839079-92839098 | MS.gene68138:CDS | 40.0% | |
GAACCTGTTGTTGGAAATTC+CGG | + | chr3.1:92839466-92839485 | MS.gene68138:CDS | 40.0% | |
GCATCTGTGAAATTGTACAC+AGG | - | chr3.1:92839946-92839965 | None:intergenic | 40.0% | |
GCCAGGAACTTATGAATACT+TGG | + | chr3.1:92839807-92839826 | MS.gene68138:CDS | 40.0% | |
GGGCATATAAATGGGATGTT+TGG | + | chr3.1:92839901-92839920 | MS.gene68138:CDS | 40.0% | |
GTTCGTGCTTTCAAATCAGT+TGG | + | chr3.1:92838842-92838861 | MS.gene68138:CDS | 40.0% | |
TGAAAACACTCTAGCTGAGA+TGG | + | chr3.1:92839129-92839148 | MS.gene68138:CDS | 40.0% | |
TGGAGGTAGGAGAGATATTA+TGG | + | chr3.1:92839684-92839703 | MS.gene68138:CDS | 40.0% | |
TTCCCCAGAGTTGTTATATC+AGG | - | chr3.1:92839631-92839650 | None:intergenic | 40.0% | |
TTTCTTGTTAAGGCAGGTAG+TGG | + | chr3.1:92839301-92839320 | MS.gene68138:CDS | 40.0% | |
! | ATTACAGGTGAGCTTGTTCA+AGG | + | chr3.1:92839835-92839854 | MS.gene68138:CDS | 40.0% |
! | CTTGATGATCTTCTCTTTGC+CGG | - | chr3.1:92839248-92839267 | None:intergenic | 40.0% |
! | GATCCTTTTCTTGTTAAGGC+AGG | + | chr3.1:92839295-92839314 | MS.gene68138:CDS | 40.0% |
!! | ACTGATTTGAAAGCACGAAC+AGG | - | chr3.1:92838842-92838861 | None:intergenic | 40.0% |
!! | CCAAGTTTGCTAAGTTCTTC+TGG | + | chr3.1:92839983-92840002 | MS.gene68138:CDS | 40.0% |
!! | GTTAGCAGAAGGTGTCTATT+TGG | + | chr3.1:92840011-92840030 | MS.gene68138:CDS | 40.0% |
AACAGGTTCGAGGAAGACTA+CGG | - | chr3.1:92839455-92839474 | None:intergenic | 45.0% | |
AATCCTTTGGCAATGACTGC+AGG | + | chr3.1:92839757-92839776 | MS.gene68138:CDS | 45.0% | |
ACTGGATTCCGTTTGTCGTA+TGG | + | chr3.1:92839577-92839596 | MS.gene68138:CDS | 45.0% | |
AGCAGCAAAGTCATTGAAGG+GGG | - | chr3.1:92839395-92839414 | None:intergenic | 45.0% | |
CAGCAGCAAAGTCATTGAAG+GGG | - | chr3.1:92839396-92839415 | None:intergenic | 45.0% | |
CGTGCTTTCAAATCAGTTGG+TGG | + | chr3.1:92838845-92838864 | MS.gene68138:CDS | 45.0% | |
CTTCATTGTCTCAGCAAGAG+CGG | - | chr3.1:92839077-92839096 | None:intergenic | 45.0% | |
GAGAGATATTATGGAGACCG+TGG | + | chr3.1:92839693-92839712 | MS.gene68138:CDS | 45.0% | |
TACGGCTATCTCTCCTTTGT+TGG | - | chr3.1:92839437-92839456 | None:intergenic | 45.0% | |
TATTGGTCACGCTGATGATC+AGG | + | chr3.1:92838964-92838983 | MS.gene68138:CDS | 45.0% | |
TCAGCGTGACCAATAATTGC+AGG | - | chr3.1:92838959-92838978 | None:intergenic | 45.0% | |
TCTCTTTGCCGGTATAAGCA+CGG | - | chr3.1:92839237-92839256 | None:intergenic | 45.0% | |
TCTTGGGGTCCTGCAATTAT+TGG | + | chr3.1:92838947-92838966 | MS.gene68138:CDS | 45.0% | |
TGCTGCTGAGAAGGTCTTTA+GGG | + | chr3.1:92840104-92840123 | MS.gene68138:CDS | 45.0% | |
TTCCTTGCGCAAAATCACCA+AGG | + | chr3.1:92839519-92839538 | MS.gene68138:CDS | 45.0% | |
TTGAAGCTGGTAAGAAGGCA+GGG | + | chr3.1:92839863-92839882 | MS.gene68138:CDS | 45.0% | |
TTTGGCACCTTCACAGTTTG+AGG | + | chr3.1:92840029-92840048 | MS.gene68138:CDS | 45.0% | |
! | ACAACTCTGGGGAAGATCAT+TGG | + | chr3.1:92839637-92839656 | MS.gene68138:CDS | 45.0% |
! | ATCAGAAGTATGTGCCAAGC+TGG | - | chr3.1:92840064-92840083 | None:intergenic | 45.0% |
! | GTTTCATTGGTGGCAGCTTT+AGG | - | chr3.1:92839364-92839383 | None:intergenic | 45.0% |
! | TGCTGTTCCCAGCATTGAAA+TGG | + | chr3.1:92839159-92839178 | MS.gene68138:CDS | 45.0% |
!! | GGAGGTGCTCAACAATACTT+TGG | + | chr3.1:92839598-92839617 | MS.gene68138:CDS | 45.0% |
!! | GTTCAAGGCATTGTTGAAGC+TGG | + | chr3.1:92839850-92839869 | MS.gene68138:CDS | 45.0% |
!! | TTCTGGGGTATGTTAGCAGA+AGG | + | chr3.1:92840000-92840019 | MS.gene68138:CDS | 45.0% |
AACCCAGCCTCAAACTGTGA+AGG | - | chr3.1:92840039-92840058 | None:intergenic | 50.0% | |
AAGACAAGGTGCACCAAAGC+TGG | - | chr3.1:92839107-92839126 | None:intergenic | 50.0% | |
AAGGCAGGGCATGCAATATG+TGG | + | chr3.1:92839877-92839896 | MS.gene68138:CDS | 50.0% | |
AGGGGAATCAGGAAGTCCTA+GGG | - | chr3.1:92839335-92839354 | None:intergenic | 50.0% | |
AGTCATTGAAGGGGGCTGTA+AGG | - | chr3.1:92839387-92839406 | None:intergenic | 50.0% | |
ATGCCTGCAGTCATTGCCAA+AGG | - | chr3.1:92839763-92839782 | None:intergenic | 50.0% | |
CAGGGCATGCAATATGTGGT+GGG | + | chr3.1:92839881-92839900 | MS.gene68138:CDS | 50.0% | |
CAGTAGGTGCATATGGAGGT+AGG | + | chr3.1:92839671-92839690 | MS.gene68138:CDS | 50.0% | |
CTACCTCCATATGCACCTAC+TGG | - | chr3.1:92839673-92839692 | None:intergenic | 50.0% | |
CTCTTTGCCGGTATAAGCAC+GGG | - | chr3.1:92839236-92839255 | None:intergenic | 50.0% | |
CTGAAGCGTATTAAGGAGCC+AGG | + | chr3.1:92839790-92839809 | MS.gene68138:CDS | 50.0% | |
CTGCTGCTGAGAAGGTCTTT+AGG | + | chr3.1:92840103-92840122 | MS.gene68138:CDS | 50.0% | |
GACGTTGAGTGGGAATCCTT+TGG | + | chr3.1:92839744-92839763 | MS.gene68138:CDS | 50.0% | |
GAGCACCTCCATACGACAAA+CGG | - | chr3.1:92839588-92839607 | None:intergenic | 50.0% | |
GGATTCCGTTTGTCGTATGG+AGG | + | chr3.1:92839580-92839599 | MS.gene68138:CDS | 50.0% | |
GGCTGTAAGGGTTTCATTGG+TGG | - | chr3.1:92839374-92839393 | None:intergenic | 50.0% | |
GGTTTGCCAGTAGGTGCATA+TGG | + | chr3.1:92839664-92839683 | MS.gene68138:CDS | 50.0% | |
GTCATTGAAGGGGGCTGTAA+GGG | - | chr3.1:92839386-92839405 | None:intergenic | 50.0% | |
GTCTTCCTCGAACCTGTTGT+TGG | + | chr3.1:92839457-92839476 | MS.gene68138:CDS | 50.0% | |
GTTGAAGCTGGTAAGAAGGC+AGG | + | chr3.1:92839862-92839881 | MS.gene68138:CDS | 50.0% | |
TATTATGGAGACCGTGGCTC+CGG | + | chr3.1:92839699-92839718 | MS.gene68138:CDS | 50.0% | |
TCTGGGGAAGATCATTGGAG+GGG | + | chr3.1:92839642-92839661 | MS.gene68138:CDS | 50.0% | |
TTAGGAACACCAGGGGAATC+AGG | - | chr3.1:92839346-92839365 | None:intergenic | 50.0% | |
TTGCCAGTAGGTGCATATGG+AGG | + | chr3.1:92839667-92839686 | MS.gene68138:CDS | 50.0% | |
! | ACTCTGGGGAAGATCATTGG+AGG | + | chr3.1:92839640-92839659 | MS.gene68138:CDS | 50.0% |
! | CACCTTCACAGTTTGAGGCT+GGG | + | chr3.1:92840034-92840053 | MS.gene68138:CDS | 50.0% |
! | CTCTGGGGAAGATCATTGGA+GGG | + | chr3.1:92839641-92839660 | MS.gene68138:CDS | 50.0% |
!! | CTCCTTGGTGATTTTGCGCA+AGG | - | chr3.1:92839524-92839543 | None:intergenic | 50.0% |
!! | GAGAAGGGCATTGTTCTCCT+TGG | - | chr3.1:92839539-92839558 | None:intergenic | 50.0% |
!! | TGGCAGCTTTAGGAACACCA+GGG | - | chr3.1:92839354-92839373 | None:intergenic | 50.0% |
AACGTCCCAGCCTGGTACAT+AGG | - | chr3.1:92839730-92839749 | None:intergenic | 55.0% | |
ACAGGAGAGTTCACACCTCC+AGG | - | chr3.1:92838824-92838843 | None:intergenic | 55.0% | |
ACCCATGCATGCTTCAGTGC+CGG | - | chr3.1:92839200-92839219 | None:intergenic | 55.0% | |
ATTGGAGGGGGTTTGCCAGT+AGG | + | chr3.1:92839655-92839674 | MS.gene68138:CDS | 55.0% | |
CAGGGGAATCAGGAAGTCCT+AGG | - | chr3.1:92839336-92839355 | None:intergenic | 55.0% | |
CCACATGCGAGCACCTTTGA+CGG | - | chr3.1:92838891-92838910 | None:intergenic | 55.0% | |
CTAGGACTTCCTGATTCCCC+TGG | + | chr3.1:92839334-92839353 | MS.gene68138:CDS | 55.0% | |
CTGGACCTATGTACCAGGCT+GGG | + | chr3.1:92839722-92839741 | MS.gene68138:CDS | 55.0% | |
CTGGGGAAGATCATTGGAGG+GGG | + | chr3.1:92839643-92839662 | MS.gene68138:CDS | 55.0% | |
GACCATTGCTGCTGCTGAGA+AGG | + | chr3.1:92840095-92840114 | MS.gene68138:CDS | 55.0% | |
GACCTTCTCAGCAGCAGCAA+TGG | - | chr3.1:92840100-92840119 | None:intergenic | 55.0% | |
GCAGGGCATGCAATATGTGG+TGG | + | chr3.1:92839880-92839899 | MS.gene68138:CDS | 55.0% | |
GCTCGCATGTGGGACATTGA+TGG | + | chr3.1:92838899-92838918 | MS.gene68138:CDS | 55.0% | |
GGAATCAGGAAGTCCTAGGG+TGG | - | chr3.1:92839332-92839351 | None:intergenic | 55.0% | |
GGGGGCTGTAAGGGTTTCAT+TGG | - | chr3.1:92839377-92839396 | None:intergenic | 55.0% | |
! | GCACCTTCACAGTTTGAGGC+TGG | + | chr3.1:92840033-92840052 | MS.gene68138:CDS | 55.0% |
! | TCCGGCACTGAAGCATGCAT+GGG | + | chr3.1:92839196-92839215 | MS.gene68138:CDS | 55.0% |
! | TTCCGGCACTGAAGCATGCA+TGG | + | chr3.1:92839195-92839214 | MS.gene68138:CDS | 55.0% |
!! | CGTCAAAGGTGCTCGCATGT+GGG | + | chr3.1:92838889-92838908 | MS.gene68138:CDS | 55.0% |
!! | GGCAGCTTTAGGAACACCAG+GGG | - | chr3.1:92839353-92839372 | None:intergenic | 55.0% |
!! | GTGGCAGCTTTAGGAACACC+AGG | - | chr3.1:92839355-92839374 | None:intergenic | 55.0% |
ACCAGGCTGGGACGTTGAGT+GGG | + | chr3.1:92839734-92839753 | MS.gene68138:CDS | 60.0% | |
CGCCTTGCCCGTGCTTATAC+CGG | + | chr3.1:92839226-92839245 | MS.gene68138:CDS | 60.0% | |
CGGTATAAGCACGGGCAAGG+CGG | - | chr3.1:92839228-92839247 | None:intergenic | 60.0% | |
GCCTGGTACATAGGTCCAGC+CGG | - | chr3.1:92839721-92839740 | None:intergenic | 60.0% | |
GCTGGACCTATGTACCAGGC+TGG | + | chr3.1:92839721-92839740 | MS.gene68138:CDS | 60.0% | |
TACCAGGCTGGGACGTTGAG+TGG | + | chr3.1:92839733-92839752 | MS.gene68138:CDS | 60.0% | |
TCCGGCTGGACCTATGTACC+AGG | + | chr3.1:92839717-92839736 | MS.gene68138:CDS | 60.0% | |
TGAGGCTGGGTTCACCAGCT+TGG | + | chr3.1:92840047-92840066 | MS.gene68138:CDS | 60.0% | |
TGCCGGTATAAGCACGGGCA+AGG | - | chr3.1:92839231-92839250 | None:intergenic | 60.0% | |
!! | CCGTCAAAGGTGCTCGCATG+TGG | + | chr3.1:92838888-92838907 | MS.gene68138:CDS | 60.0% |
!! | GGTAGTGGAGTTGCCACCCT+AGG | + | chr3.1:92839316-92839335 | MS.gene68138:CDS | 60.0% |
CATAGGTCCAGCCGGAGCCA+CGG | - | chr3.1:92839713-92839732 | None:intergenic | 65.0% | |
TCCCACTCAACGTCCCAGCC+TGG | - | chr3.1:92839738-92839757 | None:intergenic | 65.0% | |
ATGGAGACCGTGGCTCCGGC+TGG | + | chr3.1:92839703-92839722 | MS.gene68138:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 92838818 | 92840134 | 92838818 | ID=MS.gene68138 |
chr3.1 | mRNA | 92838818 | 92840134 | 92838818 | ID=MS.gene68138.t1;Parent=MS.gene68138 |
chr3.1 | exon | 92838818 | 92838985 | 92838818 | ID=MS.gene68138.t1.exon1;Parent=MS.gene68138.t1 |
chr3.1 | CDS | 92838818 | 92838985 | 92838818 | ID=cds.MS.gene68138.t1;Parent=MS.gene68138.t1 |
chr3.1 | exon | 92839067 | 92840134 | 92839067 | ID=MS.gene68138.t1.exon2;Parent=MS.gene68138.t1 |
chr3.1 | CDS | 92839067 | 92840134 | 92839067 | ID=cds.MS.gene68138.t1;Parent=MS.gene68138.t1 |
Gene Sequence |
Protein sequence |