Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37487.t1 | XP_003603213.1 | 81.7 | 240 | 7 | 2 | 6 | 209 | 7 | 245 | 1.00E-96 | 362.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37487.t1 | Q9C595 | 41.3 | 196 | 67 | 3 | 50 | 209 | 64 | 247 | 2.2e-26 | 120.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37487.t1 | G7J8F7 | 81.7 | 240 | 7 | 2 | 6 | 209 | 7 | 245 | 7.5e-97 | 362.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene37487 | 0.807738 | 4.37E-50 | -1.69E-46 |
| MS.gene049171 | MS.gene37487 | 0.907749 | 3.62E-81 | -1.69E-46 |
| MS.gene049173 | MS.gene37487 | 0.849572 | 2.97E-60 | -1.69E-46 |
| MS.gene049217 | MS.gene37487 | 0.886506 | 3.22E-72 | -1.69E-46 |
| MS.gene049222 | MS.gene37487 | 0.903464 | 3.38E-79 | -1.69E-46 |
| MS.gene049232 | MS.gene37487 | 0.858346 | 8.77E-63 | -1.69E-46 |
| MS.gene049281 | MS.gene37487 | -0.813333 | 2.70E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene37487 | 0.920306 | 1.51E-87 | -1.69E-46 |
| MS.gene049320 | MS.gene37487 | 0.907799 | 3.43E-81 | -1.69E-46 |
| MS.gene04939 | MS.gene37487 | 0.818331 | 2.07E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene37487 | 0.832273 | 1.04E-55 | -1.69E-46 |
| MS.gene049615 | MS.gene37487 | 0.831694 | 1.44E-55 | -1.69E-46 |
| MS.gene049627 | MS.gene37487 | 0.866974 | 1.93E-65 | -1.69E-46 |
| MS.gene049633 | MS.gene37487 | 0.857144 | 1.99E-62 | -1.69E-46 |
| MS.gene049634 | MS.gene37487 | -0.804935 | 1.70E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene37487 | 0.82217 | 2.73E-53 | -1.69E-46 |
| MS.gene05010 | MS.gene37487 | 0.873385 | 1.53E-67 | -1.69E-46 |
| MS.gene050163 | MS.gene37487 | 0.92919 | 9.92E-93 | -1.69E-46 |
| MS.gene050165 | MS.gene37487 | 0.93091 | 8.22E-94 | -1.69E-46 |
| MS.gene050170 | MS.gene37487 | 0.827925 | 1.19E-54 | -1.69E-46 |
| MS.gene050216 | MS.gene37487 | 0.819015 | 1.45E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene37487 | 0.870468 | 1.43E-66 | -1.69E-46 |
| MS.gene050333 | MS.gene37487 | 0.890936 | 6.27E-74 | -1.69E-46 |
| MS.gene050381 | MS.gene37487 | -0.835043 | 2.11E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene37487 | 0.858893 | 6.03E-63 | -1.69E-46 |
| MS.gene050496 | MS.gene37487 | 0.835296 | 1.82E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene37487 | 0.938202 | 9.93E-99 | -1.69E-46 |
| MS.gene050518 | MS.gene37487 | 0.916629 | 1.42E-85 | -1.69E-46 |
| MS.gene050538 | MS.gene37487 | 0.82805 | 1.11E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene37487 | 0.906815 | 9.91E-81 | -1.69E-46 |
| MS.gene050612 | MS.gene37487 | 0.924876 | 3.92E-90 | -1.69E-46 |
| MS.gene050662 | MS.gene37487 | 0.803603 | 3.22E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene37487 | 0.876238 | 1.64E-68 | -1.69E-46 |
| MS.gene050699 | MS.gene37487 | 0.889185 | 3.04E-73 | -1.69E-46 |
| MS.gene050747 | MS.gene37487 | 0.837646 | 4.60E-57 | -1.69E-46 |
| MS.gene050772 | MS.gene37487 | 0.859452 | 4.09E-63 | -1.69E-46 |
| MS.gene050781 | MS.gene37487 | 0.806753 | 7.06E-50 | -1.69E-46 |
| MS.gene05079 | MS.gene37487 | -0.805779 | 1.13E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene37487 | 0.855827 | 4.86E-62 | -1.69E-46 |
| MS.gene050832 | MS.gene37487 | -0.821265 | 4.43E-53 | -1.69E-46 |
| MS.gene050833 | MS.gene37487 | -0.818277 | 2.13E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene37487 | 0.87654 | 1.29E-68 | -1.69E-46 |
| MS.gene050871 | MS.gene37487 | 0.874321 | 7.40E-68 | -1.69E-46 |
| MS.gene050876 | MS.gene37487 | 0.885348 | 8.79E-72 | -1.69E-46 |
| MS.gene05087 | MS.gene37487 | 0.830286 | 3.20E-55 | -1.69E-46 |
| MS.gene050883 | MS.gene37487 | -0.807713 | 4.42E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene37487 | 0.86595 | 4.07E-65 | -1.69E-46 |
| MS.gene050950 | MS.gene37487 | 0.832551 | 8.86E-56 | -1.69E-46 |
| MS.gene050986 | MS.gene37487 | 0.89945 | 1.96E-77 | -1.69E-46 |
| MS.gene05100 | MS.gene37487 | 0.893576 | 5.53E-75 | -1.69E-46 |
| MS.gene05104 | MS.gene37487 | -0.807563 | 4.76E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene37487 | -0.816149 | 6.42E-52 | -1.69E-46 |
| MS.gene051138 | MS.gene37487 | -0.822526 | 2.26E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene37487 | 0.814574 | 1.44E-51 | -1.69E-46 |
| MS.gene051268 | MS.gene37487 | 0.817401 | 3.36E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene37487 | 0.876679 | 1.15E-68 | -1.69E-46 |
| MS.gene051364 | MS.gene37487 | -0.819572 | 1.08E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene37487 | -0.818539 | 1.86E-52 | -1.69E-46 |
| MS.gene051551 | MS.gene37487 | 0.867255 | 1.57E-65 | -1.69E-46 |
| MS.gene051666 | MS.gene37487 | 0.850926 | 1.24E-60 | -1.69E-46 |
| MS.gene051694 | MS.gene37487 | 0.845774 | 3.29E-59 | -1.69E-46 |
| MS.gene051734 | MS.gene37487 | 0.804319 | 2.29E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene37487 | 0.872932 | 2.17E-67 | -1.69E-46 |
| MS.gene051858 | MS.gene37487 | 0.839792 | 1.28E-57 | -1.69E-46 |
| MS.gene051949 | MS.gene37487 | 0.869457 | 3.05E-66 | -1.69E-46 |
| MS.gene052129 | MS.gene37487 | -0.815468 | 9.10E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene37487 | 0.891711 | 3.10E-74 | -1.69E-46 |
| MS.gene052271 | MS.gene37487 | 0.826531 | 2.58E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene37487 | 0.840442 | 8.67E-58 | -1.69E-46 |
| MS.gene052482 | MS.gene37487 | 0.876605 | 1.22E-68 | -1.69E-46 |
| MS.gene052486 | MS.gene37487 | 0.88336 | 4.79E-71 | -1.69E-46 |
| MS.gene052503 | MS.gene37487 | 0.830414 | 2.98E-55 | -1.69E-46 |
| MS.gene052506 | MS.gene37487 | 0.820852 | 5.51E-53 | -1.69E-46 |
| MS.gene052605 | MS.gene37487 | 0.800139 | 1.66E-48 | -1.69E-46 |
| MS.gene052615 | MS.gene37487 | 0.824755 | 6.80E-54 | -1.69E-46 |
| MS.gene052670 | MS.gene37487 | 0.817307 | 3.53E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene37487 | 0.831629 | 1.50E-55 | -1.69E-46 |
| MS.gene052823 | MS.gene37487 | 0.825694 | 4.08E-54 | -1.69E-46 |
| MS.gene052825 | MS.gene37487 | 0.823935 | 1.06E-53 | -1.69E-46 |
| MS.gene052870 | MS.gene37487 | 0.80513 | 1.55E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene37487 | 0.820659 | 6.10E-53 | -1.69E-46 |
| MS.gene052916 | MS.gene37487 | 0.831374 | 1.73E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene37487 | 0.844506 | 7.25E-59 | -1.69E-46 |
| MS.gene053104 | MS.gene37487 | 0.807054 | 6.10E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene37487 | 0.870389 | 1.51E-66 | -1.69E-46 |
| MS.gene053207 | MS.gene37487 | 0.843398 | 1.44E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene37487 | 0.874865 | 4.84E-68 | -1.69E-46 |
| MS.gene053284 | MS.gene37487 | 0.845773 | 3.29E-59 | -1.69E-46 |
| MS.gene053285 | MS.gene37487 | 0.831283 | 1.82E-55 | -1.69E-46 |
| MS.gene053286 | MS.gene37487 | 0.878725 | 2.23E-69 | -1.69E-46 |
| MS.gene053322 | MS.gene37487 | 0.820952 | 5.23E-53 | -1.69E-46 |
| MS.gene053420 | MS.gene37487 | -0.82318 | 1.59E-53 | -1.69E-46 |
| MS.gene053436 | MS.gene37487 | 0.81427 | 1.68E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene37487 | 0.802344 | 5.86E-49 | -1.69E-46 |
| MS.gene053480 | MS.gene37487 | 0.808976 | 2.38E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene37487 | -0.806462 | 8.13E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene37487 | 0.833352 | 5.60E-56 | -1.69E-46 |
| MS.gene053626 | MS.gene37487 | 0.82271 | 2.05E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene37487 | 0.878544 | 2.58E-69 | -1.69E-46 |
| MS.gene053824 | MS.gene37487 | 0.85049 | 1.64E-60 | -1.69E-46 |
| MS.gene053916 | MS.gene37487 | 0.840789 | 7.04E-58 | -1.69E-46 |
| MS.gene054003 | MS.gene37487 | 0.817558 | 3.10E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene37487 | 0.819176 | 1.33E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene37487 | 0.87063 | 1.26E-66 | -1.69E-46 |
| MS.gene054600 | MS.gene37487 | 0.871945 | 4.64E-67 | -1.69E-46 |
| MS.gene054616 | MS.gene37487 | -0.812617 | 3.87E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene37487 | 0.907675 | 3.92E-81 | -1.69E-46 |
| MS.gene054706 | MS.gene37487 | -0.837968 | 3.80E-57 | -1.69E-46 |
| MS.gene05470 | MS.gene37487 | 0.891344 | 4.33E-74 | -1.69E-46 |
| MS.gene054954 | MS.gene37487 | 0.916514 | 1.63E-85 | -1.69E-46 |
| MS.gene054959 | MS.gene37487 | -0.801904 | 7.23E-49 | -1.69E-46 |
| MS.gene055154 | MS.gene37487 | -0.842382 | 2.68E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene37487 | 0.837197 | 5.99E-57 | -1.69E-46 |
| MS.gene055212 | MS.gene37487 | 0.812717 | 3.68E-51 | -1.69E-46 |
| MS.gene055224 | MS.gene37487 | 0.803943 | 2.74E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene37487 | 0.902538 | 8.75E-79 | -1.69E-46 |
| MS.gene055397 | MS.gene37487 | 0.810571 | 1.08E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene37487 | 0.811594 | 6.48E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene37487 | 0.909735 | 4.10E-82 | -1.69E-46 |
| MS.gene055577 | MS.gene37487 | 0.917673 | 3.98E-86 | -1.69E-46 |
| MS.gene055634 | MS.gene37487 | 0.820516 | 6.58E-53 | -1.69E-46 |
| MS.gene055636 | MS.gene37487 | 0.802835 | 4.65E-49 | -1.69E-46 |
| MS.gene055638 | MS.gene37487 | 0.83019 | 3.38E-55 | -1.69E-46 |
| MS.gene055647 | MS.gene37487 | 0.809319 | 2.01E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene37487 | 0.823438 | 1.39E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene37487 | 0.902133 | 1.32E-78 | -1.69E-46 |
| MS.gene055750 | MS.gene37487 | 0.895963 | 5.82E-76 | -1.69E-46 |
| MS.gene055751 | MS.gene37487 | 0.907776 | 3.51E-81 | -1.69E-46 |
| MS.gene055776 | MS.gene37487 | 0.872409 | 3.25E-67 | -1.69E-46 |
| MS.gene055849 | MS.gene37487 | 0.832642 | 8.41E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene37487 | 0.872031 | 4.35E-67 | -1.69E-46 |
| MS.gene055941 | MS.gene37487 | 0.856984 | 2.22E-62 | -1.69E-46 |
| MS.gene055956 | MS.gene37487 | -0.816593 | 5.11E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene37487 | 0.835181 | 1.95E-56 | -1.69E-46 |
| MS.gene056374 | MS.gene37487 | 0.86815 | 8.08E-66 | -1.69E-46 |
| MS.gene056409 | MS.gene37487 | 0.841491 | 4.60E-58 | -1.69E-46 |
| MS.gene056449 | MS.gene37487 | 0.817903 | 2.59E-52 | -1.69E-46 |
| MS.gene056450 | MS.gene37487 | 0.824316 | 8.62E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene37487 | 0.899618 | 1.66E-77 | -1.69E-46 |
| MS.gene056510 | MS.gene37487 | 0.890668 | 8.00E-74 | -1.69E-46 |
| MS.gene056549 | MS.gene37487 | 0.851348 | 9.41E-61 | -1.69E-46 |
| MS.gene056550 | MS.gene37487 | -0.854164 | 1.48E-61 | -1.69E-46 |
| MS.gene056610 | MS.gene37487 | 0.852204 | 5.38E-61 | -1.69E-46 |
| MS.gene056657 | MS.gene37487 | 0.908645 | 1.36E-81 | -1.69E-46 |
| MS.gene056692 | MS.gene37487 | 0.897296 | 1.61E-76 | -1.69E-46 |
| MS.gene056856 | MS.gene37487 | -0.808641 | 2.80E-50 | -1.69E-46 |
| MS.gene056898 | MS.gene37487 | 0.841528 | 4.50E-58 | -1.69E-46 |
| MS.gene057086 | MS.gene37487 | 0.800312 | 1.53E-48 | -1.69E-46 |
| MS.gene057129 | MS.gene37487 | 0.845883 | 3.08E-59 | -1.69E-46 |
| MS.gene057246 | MS.gene37487 | 0.826336 | 2.87E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene37487 | 0.802104 | 6.57E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene37487 | 0.85008 | 2.14E-60 | -1.69E-46 |
| MS.gene05753 | MS.gene37487 | 0.833683 | 4.63E-56 | -1.69E-46 |
| MS.gene057658 | MS.gene37487 | 0.856894 | 2.36E-62 | -1.69E-46 |
| MS.gene057831 | MS.gene37487 | 0.876943 | 9.33E-69 | -1.69E-46 |
| MS.gene057857 | MS.gene37487 | 0.812217 | 4.74E-51 | -1.69E-46 |
| MS.gene05787 | MS.gene37487 | 0.806276 | 8.90E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene37487 | 0.827132 | 1.85E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene37487 | 0.84515 | 4.86E-59 | -1.69E-46 |
| MS.gene058019 | MS.gene37487 | 0.811842 | 5.72E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene37487 | -0.807077 | 6.03E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene37487 | -0.810844 | 9.42E-51 | -1.69E-46 |
| MS.gene058323 | MS.gene37487 | 0.804537 | 2.06E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene37487 | -0.862893 | 3.67E-64 | -1.69E-46 |
| MS.gene058335 | MS.gene37487 | 0.801787 | 7.63E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene37487 | 0.837125 | 6.25E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene37487 | 0.840015 | 1.12E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene37487 | 0.908339 | 1.91E-81 | -1.69E-46 |
| MS.gene058544 | MS.gene37487 | 0.881382 | 2.51E-70 | -1.69E-46 |
| MS.gene058719 | MS.gene37487 | 0.811386 | 7.18E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene37487 | 0.849276 | 3.59E-60 | -1.69E-46 |
| MS.gene058773 | MS.gene37487 | 0.893364 | 6.73E-75 | -1.69E-46 |
| MS.gene058838 | MS.gene37487 | 0.863149 | 3.06E-64 | -1.69E-46 |
| MS.gene059022 | MS.gene37487 | 0.911444 | 6.04E-83 | -1.69E-46 |
| MS.gene059023 | MS.gene37487 | 0.88805 | 8.33E-73 | -1.69E-46 |
| MS.gene059029 | MS.gene37487 | 0.823371 | 1.44E-53 | -1.69E-46 |
| MS.gene059045 | MS.gene37487 | -0.812613 | 3.88E-51 | -1.69E-46 |
| MS.gene059079 | MS.gene37487 | 0.836142 | 1.11E-56 | -1.69E-46 |
| MS.gene059102 | MS.gene37487 | -0.810318 | 1.22E-50 | -1.69E-46 |
| MS.gene05912 | MS.gene37487 | 0.851763 | 7.18E-61 | -1.69E-46 |
| MS.gene05913 | MS.gene37487 | 0.842166 | 3.05E-58 | -1.69E-46 |
| MS.gene05914 | MS.gene37487 | 0.822695 | 2.06E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene37487 | 0.848235 | 6.98E-60 | -1.69E-46 |
| MS.gene059367 | MS.gene37487 | 0.829655 | 4.56E-55 | -1.69E-46 |
| MS.gene059479 | MS.gene37487 | -0.838798 | 2.32E-57 | -1.69E-46 |
| MS.gene059526 | MS.gene37487 | -0.80086 | 1.18E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene37487 | 0.820653 | 6.12E-53 | -1.69E-46 |
| MS.gene059667 | MS.gene37487 | 0.802652 | 5.07E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene37487 | 0.921336 | 4.08E-88 | -1.69E-46 |
| MS.gene059718 | MS.gene37487 | 0.895581 | 8.37E-76 | -1.69E-46 |
| MS.gene059756 | MS.gene37487 | 0.865537 | 5.49E-65 | -1.69E-46 |
| MS.gene059801 | MS.gene37487 | 0.852576 | 4.22E-61 | -1.69E-46 |
| MS.gene059837 | MS.gene37487 | 0.809516 | 1.82E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene37487 | 0.901014 | 4.11E-78 | -1.69E-46 |
| MS.gene059902 | MS.gene37487 | 0.835675 | 1.46E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene37487 | 0.824661 | 7.15E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene37487 | 0.837649 | 4.59E-57 | -1.69E-46 |
| MS.gene060193 | MS.gene37487 | 0.825893 | 3.66E-54 | -1.69E-46 |
| MS.gene060337 | MS.gene37487 | -0.8131 | 3.04E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene37487 | 0.830385 | 3.03E-55 | -1.69E-46 |
| MS.gene060595 | MS.gene37487 | -0.811366 | 7.26E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene37487 | 0.895761 | 7.05E-76 | -1.69E-46 |
| MS.gene060728 | MS.gene37487 | 0.819887 | 9.17E-53 | -1.69E-46 |
| MS.gene060761 | MS.gene37487 | 0.811935 | 5.46E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene37487 | 0.909602 | 4.75E-82 | -1.69E-46 |
| MS.gene060778 | MS.gene37487 | 0.838571 | 2.66E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene37487 | 0.902306 | 1.11E-78 | -1.69E-46 |
| MS.gene060823 | MS.gene37487 | -0.822514 | 2.27E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene37487 | 0.857968 | 1.14E-62 | -1.69E-46 |
| MS.gene060982 | MS.gene37487 | 0.893299 | 7.15E-75 | -1.69E-46 |
| MS.gene06105 | MS.gene37487 | 0.804309 | 2.30E-49 | -1.69E-46 |
| MS.gene061134 | MS.gene37487 | 0.809399 | 1.93E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene37487 | 0.905886 | 2.67E-80 | -1.69E-46 |
| MS.gene061200 | MS.gene37487 | 0.846155 | 2.59E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37487.t1 | MTR_3g105100 | 81.667 | 240 | 7 | 2 | 6 | 209 | 7 | 245 | 2.83e-133 | 374 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37487.t1 | AT5G21920 | 41.327 | 196 | 67 | 3 | 50 | 209 | 64 | 247 | 2.90e-37 | 130 |
| MS.gene37487.t1 | AT5G21920 | 59.813 | 107 | 42 | 1 | 50 | 156 | 64 | 169 | 9.76e-37 | 126 |
Find 67 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTTGTGGAGGGGAGAAAT+TGG | 0.307574 | 3.4:-90673494 | None:intergenic |
| AGAGAGTAGTTTGTTTAAGA+AGG | 0.343444 | 3.4:-90673584 | None:intergenic |
| ATTATCGACGGCGTTGGAAA+TGG | 0.365129 | 3.4:-90673524 | None:intergenic |
| TTGAGAAAGGGGAATGCTAA+TGG | 0.370536 | 3.4:-90673460 | None:intergenic |
| GCTGGCTTAGTGGTGGCTAA+TGG | 0.379478 | 3.4:+90673813 | MS.gene37487:CDS |
| AGCTAAGGAGTGGAGAAGTT+TGG | 0.382379 | 3.4:-90673551 | None:intergenic |
| TTACCTGGTGATTCCGTGGC+TGG | 0.385685 | 3.4:+90673795 | MS.gene37487:CDS |
| GAGAGTAGTTTGTTTAAGAA+GGG | 0.386231 | 3.4:-90673583 | None:intergenic |
| ATGGATGTGGGGAGTTGTGG+AGG | 0.386437 | 3.4:-90673505 | None:intergenic |
| TGAGAAAGGGGAATGCTAAT+GGG | 0.387303 | 3.4:-90673459 | None:intergenic |
| ATTATGATATTCTAATTTGT+AGG | 0.389591 | 3.4:-90675396 | None:intergenic |
| TAACCTGTAGGCACGTGTTA+TGG | 0.398782 | 3.4:-90673621 | None:intergenic |
| TCTGTGACTGGAAGCTCAGC+AGG | 0.408614 | 3.4:-90675264 | None:intergenic |
| TTACTTCTTCACAGAACAAA+TGG | 0.415101 | 3.4:+90675334 | MS.gene37487:CDS |
| TCTTGCCTCAAGACCTTGCT+TGG | 0.419675 | 3.4:-90675292 | None:intergenic |
| GAAATGGATGTGGGGAGTTG+TGG | 0.420790 | 3.4:-90673508 | None:intergenic |
| CTGCCATCGTTGCTCCTCTC+AGG | 0.431185 | 3.4:+90673913 | MS.gene37487:CDS |
| ACAACACCTTGCTCGTTGCC+AGG | 0.436913 | 3.4:+90673859 | MS.gene37487:CDS |
| TGCTTGGATTGTTCTGTGAC+TGG | 0.455730 | 3.4:-90675276 | None:intergenic |
| TTGCCAGGCTTGTTCTTACC+TGG | 0.458380 | 3.4:+90673874 | MS.gene37487:CDS |
| GAGGGGAGAAATTGGAGATG+GGG | 0.461617 | 3.4:-90673486 | None:intergenic |
| TGAGGCGGCTTCAAGGGATC+GGG | 0.461867 | 3.4:+90675358 | MS.gene37487:CDS |
| TGATTCCGTGGCTGGCTTAG+TGG | 0.463142 | 3.4:+90673803 | MS.gene37487:CDS |
| ATGAGGCGGCTTCAAGGGAT+CGG | 0.480718 | 3.4:+90675357 | MS.gene37487:CDS |
| AAATGGATGAGGCGGCTTCA+AGG | 0.483527 | 3.4:+90675351 | MS.gene37487:CDS |
| AGGGGAGAAATTGGAGATGG+GGG | 0.483831 | 3.4:-90673485 | None:intergenic |
| ACGATGGCAGGAGGAGCGTT+AGG | 0.485173 | 3.4:-90673900 | None:intergenic |
| AATGGATGAGGCGGCTTCAA+GGG | 0.495750 | 3.4:+90675352 | MS.gene37487:CDS |
| GAGAAAGGGGAATGCTAATG+GGG | 0.512370 | 3.4:-90673458 | None:intergenic |
| AGAGTAGTTTGTTTAAGAAG+GGG | 0.518070 | 3.4:-90673582 | None:intergenic |
| GGAGGGGAGAAATTGGAGAT+GGG | 0.518301 | 3.4:-90673487 | None:intergenic |
| GACGGCGTTGGAAATGGATG+TGG | 0.519771 | 3.4:-90673518 | None:intergenic |
| CTGAGAGGAGCAACGATGGC+AGG | 0.520472 | 3.4:-90673912 | None:intergenic |
| GGAACAATTATCGACGGCGT+TGG | 0.521064 | 3.4:-90673530 | None:intergenic |
| ATTCCATAACACGTGCCTAC+AGG | 0.524499 | 3.4:+90673618 | MS.gene37487:CDS |
| TGGATGTGGGGAGTTGTGGA+GGG | 0.527405 | 3.4:-90673504 | None:intergenic |
| TGGAGGGGAGAAATTGGAGA+TGG | 0.528680 | 3.4:-90673488 | None:intergenic |
| GATATTCTAATTTGTAGGAG+TGG | 0.536702 | 3.4:-90675391 | None:intergenic |
| GTAACTACAGGAACAGTAGT+AGG | 0.539864 | 3.4:+90673739 | MS.gene37487:CDS |
| AGGAGGAGCGTTAGGAAACC+AGG | 0.547677 | 3.4:-90673892 | None:intergenic |
| AAACCAGGTAAGAACAAGCC+TGG | 0.548754 | 3.4:-90673877 | None:intergenic |
| CTTCGTTTCTGTATCAGTGG+TGG | 0.549154 | 3.4:-90673401 | None:intergenic |
| CTTCTTCGTTTCTGTATCAG+TGG | 0.559382 | 3.4:-90673404 | None:intergenic |
| AACAAGCCTGGCAACGAGCA+AGG | 0.565234 | 3.4:-90673865 | None:intergenic |
| AGATTCGGTGCAGTAACTAC+AGG | 0.574341 | 3.4:+90673727 | MS.gene37487:intron |
| GGATGTGGGGAGTTGTGGAG+GGG | 0.574841 | 3.4:-90673503 | None:intergenic |
| ACGGCGTTGGAAATGGATGT+GGG | 0.580391 | 3.4:-90673517 | None:intergenic |
| ACAATCCAAGCAAGGTCTTG+AGG | 0.586357 | 3.4:+90675287 | MS.gene37487:CDS |
| TGTGAAGAAGTAACATCGGT+AGG | 0.592614 | 3.4:-90675324 | None:intergenic |
| CACAGAACAAATGGATGAGG+CGG | 0.594547 | 3.4:+90675343 | MS.gene37487:CDS |
| AAGCCAGCCACGGAATCACC+AGG | 0.598530 | 3.4:-90673798 | None:intergenic |
| ATTCTAATTTGTAGGAGTGG+AGG | 0.598689 | 3.4:-90675388 | None:intergenic |
| CTTCACAGAACAAATGGATG+AGG | 0.621441 | 3.4:+90675340 | MS.gene37487:CDS |
| TTCCGTGGCTGGCTTAGTGG+TGG | 0.624704 | 3.4:+90673806 | MS.gene37487:CDS |
| TGACCTGAGAGGAGCAACGA+TGG | 0.624970 | 3.4:-90673916 | None:intergenic |
| GTCACAGAACAATCCAAGCA+AGG | 0.632647 | 3.4:+90675279 | MS.gene37487:CDS |
| AGAGGAGCAACGATGGCAGG+AGG | 0.633054 | 3.4:-90673909 | None:intergenic |
| CTGTGACTGGAAGCTCAGCA+GGG | 0.634111 | 3.4:-90675263 | None:intergenic |
| ACTACAGGAACAGTAGTAGG+TGG | 0.635762 | 3.4:+90673742 | MS.gene37487:CDS |
| AGCCACCACTAAGCCAGCCA+CGG | 0.636007 | 3.4:-90673808 | None:intergenic |
| AAGTTTGGAACAATTATCGA+CGG | 0.638484 | 3.4:-90673536 | None:intergenic |
| GCACGTGTTATGGAATTGAG+AGG | 0.651865 | 3.4:-90673611 | None:intergenic |
| CGGCGTTGGAAATGGATGTG+GGG | 0.658267 | 3.4:-90673516 | None:intergenic |
| CTACAGGAACAGTAGTAGGT+GGG | 0.671134 | 3.4:+90673743 | MS.gene37487:CDS |
| GTTCTGTGAAGAAGTAACAT+CGG | 0.677536 | 3.4:-90675328 | None:intergenic |
| TAACATGTGACTGACCTGAG+AGG | 0.738072 | 3.4:-90673927 | None:intergenic |
| GGAATCACCAGGTAAAACAG+CGG | 0.751307 | 3.4:-90673787 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAGATAATTAAATTCTATT+GGG | - | chr3.4:90674927-90674946 | None:intergenic | 15.0% |
| !!! | AATAACAGAATCAAATATTT+TGG | - | chr3.4:90674959-90674978 | None:intergenic | 15.0% |
| !!! | TCAAATATTTTGGTAATTTA+AGG | - | chr3.4:90674949-90674968 | None:intergenic | 15.0% |
| !! | ATTAAAATTATTAGCTACGT+TGG | - | chr3.4:90675049-90675068 | None:intergenic | 20.0% |
| !! | GGTAGATAATTAAATTCTAT+TGG | - | chr3.4:90674928-90674947 | None:intergenic | 20.0% |
| !! | GTTAGAAAATTATAGTAGAA+TGG | + | chr3.4:90673977-90673996 | MS.gene37487:intron | 20.0% |
| !! | TTGAATTATTAACTAAGTCA+CGG | - | chr3.4:90674161-90674180 | None:intergenic | 20.0% |
| !!! | ATTTTTTTGTTGAAATGCAA+GGG | + | chr3.4:90674064-90674083 | MS.gene37487:intron | 20.0% |
| !!! | TATTTTTTTGTTGAAATGCA+AGG | + | chr3.4:90674063-90674082 | MS.gene37487:intron | 20.0% |
| ! | AATTTGAGTGTTCAATAAAG+TGG | + | chr3.4:90675101-90675120 | MS.gene37487:intron | 25.0% |
| ! | AGCATTTCTCTTAGAAAAAT+GGG | + | chr3.4:90674562-90674581 | MS.gene37487:intron | 25.0% |
| ! | GAAAATTATAGTAGAATGGT+TGG | + | chr3.4:90673981-90674000 | MS.gene37487:intron | 25.0% |
| ! | TAGCATTTCTCTTAGAAAAA+TGG | + | chr3.4:90674561-90674580 | MS.gene37487:intron | 25.0% |
| ! | TATCATGTGACAAAAACATA+GGG | - | chr3.4:90674222-90674241 | None:intergenic | 25.0% |
| ! | TTATCATGTGACAAAAACAT+AGG | - | chr3.4:90674223-90674242 | None:intergenic | 25.0% |
| ! | TTGTCAAAAGTTTCACAATT+GGG | - | chr3.4:90674250-90674269 | None:intergenic | 25.0% |
| !! | AAAATTTTATCTTCCATGAG+TGG | + | chr3.4:90674020-90674039 | MS.gene37487:intron | 25.0% |
| !! | ACCATTTGATTTCAATCAAA+TGG | - | chr3.4:90674761-90674780 | None:intergenic | 25.0% |
| !! | CTAGTTTGAAATCTTAACAA+AGG | + | chr3.4:90674278-90674297 | MS.gene37487:intron | 25.0% |
| !! | TCAAGTATTTTCTACGTAAA+TGG | - | chr3.4:90674884-90674903 | None:intergenic | 25.0% |
| !!! | ATGTTTTTGTCACATGATAA+GGG | + | chr3.4:90674223-90674242 | MS.gene37487:intron | 25.0% |
| !!! | TATGTTTTTGTCACATGATA+AGG | + | chr3.4:90674222-90674241 | MS.gene37487:intron | 25.0% |
| AATTATAGTAGAATGGTTGG+AGG | + | chr3.4:90673984-90674003 | MS.gene37487:intron | 30.0% | |
| ACAGCATACACAGATTTAAT+TGG | + | chr3.4:90675072-90675091 | MS.gene37487:intron | 30.0% | |
| CATTTGATCTTCCACTTTAT+TGG | + | chr3.4:90674447-90674466 | MS.gene37487:intron | 30.0% | |
| CTTCATGTTTCTTCACTTAT+TGG | + | chr3.4:90675003-90675022 | MS.gene37487:intron | 30.0% | |
| CTTGTCAAAAGTTTCACAAT+TGG | - | chr3.4:90674251-90674270 | None:intergenic | 30.0% | |
| GCCATTTGATTGAAATCAAA+TGG | + | chr3.4:90674757-90674776 | MS.gene37487:intron | 30.0% | |
| TCCACTTTATTGGAATACAT+GGG | + | chr3.4:90674457-90674476 | MS.gene37487:intron | 30.0% | |
| TTACTTCTTCACAGAACAAA+TGG | + | chr3.4:90675334-90675353 | MS.gene37487:CDS | 30.0% | |
| TTCCACTTTATTGGAATACA+TGG | + | chr3.4:90674456-90674475 | MS.gene37487:intron | 30.0% | |
| ! | AAGTTTGGAACAATTATCGA+CGG | - | chr3.4:90673539-90673558 | None:intergenic | 30.0% |
| ! | TAAGAGAAATGCTACTTGTA+GGG | - | chr3.4:90674555-90674574 | None:intergenic | 30.0% |
| ! | TTGGCAAAAGTTTATCGATT+CGG | + | chr3.4:90674195-90674214 | MS.gene37487:intron | 30.0% |
| !! | AGAGAGTAGTTTGTTTAAGA+AGG | - | chr3.4:90673587-90673606 | None:intergenic | 30.0% |
| !! | AGAGTAGTTTGTTTAAGAAG+GGG | - | chr3.4:90673585-90673604 | None:intergenic | 30.0% |
| !! | GAGAGTAGTTTGTTTAAGAA+GGG | - | chr3.4:90673586-90673605 | None:intergenic | 30.0% |
| !! | TTCAAACTAGTCTCTGTTTT+TGG | + | chr3.4:90674176-90674195 | MS.gene37487:intron | 30.0% |
| AAAGATAGGTACCAATTTGG+TGG | - | chr3.4:90674117-90674136 | None:intergenic | 35.0% | |
| ACACGTAAGTTCCATACTTA+AGG | + | chr3.4:90674633-90674652 | MS.gene37487:intron | 35.0% | |
| ACCCATGTATTCCAATAAAG+TGG | - | chr3.4:90674461-90674480 | None:intergenic | 35.0% | |
| ACTTTATTGGAATACATGGG+TGG | + | chr3.4:90674460-90674479 | MS.gene37487:intron | 35.0% | |
| ATTCAAATACGGGTCACATA+CGG | - | chr3.4:90675145-90675164 | None:intergenic | 35.0% | |
| CACAAAGATAGGTACCAATT+TGG | - | chr3.4:90674120-90674139 | None:intergenic | 35.0% | |
| CACGGAATACATTCAAATAC+GGG | - | chr3.4:90675155-90675174 | None:intergenic | 35.0% | |
| CATTCAAAACAAGGAATGCT+AGG | - | chr3.4:90675218-90675237 | None:intergenic | 35.0% | |
| CCACGGAATACATTCAAATA+CGG | - | chr3.4:90675156-90675175 | None:intergenic | 35.0% | |
| CGTAGAAAATACTTGAGTAG+CGG | + | chr3.4:90674888-90674907 | MS.gene37487:intron | 35.0% | |
| CGTATTTGAATGTATTCCGT+GGG | + | chr3.4:90675154-90675173 | MS.gene37487:intron | 35.0% | |
| CTAAGAGTAAACCACCAAAT+TGG | - | chr3.4:90674341-90674360 | None:intergenic | 35.0% | |
| GAATGAGTAAACCACCAAAT+TGG | + | chr3.4:90674103-90674122 | MS.gene37487:intron | 35.0% | |
| GTAGAAAATACTTGAGTAGC+GGG | + | chr3.4:90674889-90674908 | MS.gene37487:intron | 35.0% | |
| GTGGTTACACAAGAATTACA+AGG | + | chr3.4:90674479-90674498 | MS.gene37487:intron | 35.0% | |
| GTTACACAAGAATTACAAGG+AGG | + | chr3.4:90674482-90674501 | MS.gene37487:intron | 35.0% | |
| GTTCTGTGAAGAAGTAACAT+CGG | - | chr3.4:90675331-90675350 | None:intergenic | 35.0% | |
| TACAAAGATAGGGACCAATT+TGG | + | chr3.4:90674324-90674343 | MS.gene37487:intron | 35.0% | |
| ! | AACTAAGTCACGGACTAATT+TGG | - | chr3.4:90674151-90674170 | None:intergenic | 35.0% |
| ! | ACTAAGTCACGGACTAATTT+GGG | - | chr3.4:90674150-90674169 | None:intergenic | 35.0% |
| ! | AGAAAAATGGGATGCTTTTG+AGG | + | chr3.4:90674574-90674593 | MS.gene37487:intron | 35.0% |
| ! | ATTTGGTGGTTTACTCTTAG+TGG | + | chr3.4:90674341-90674360 | MS.gene37487:intron | 35.0% |
| ! | CTAAGAGAAATGCTACTTGT+AGG | - | chr3.4:90674556-90674575 | None:intergenic | 35.0% |
| ! | TGCAACTTTTACTAACCTGT+AGG | - | chr3.4:90673636-90673655 | None:intergenic | 35.0% |
| !! | TAGTGAAGGCATTCAAAACA+AGG | - | chr3.4:90675227-90675246 | None:intergenic | 35.0% |
| AAAGATAGGGACCAATTTGG+TGG | + | chr3.4:90674327-90674346 | MS.gene37487:intron | 40.0% | |
| AAGTTACAGCATACGCATCA+GGG | - | chr3.4:90674986-90675005 | None:intergenic | 40.0% | |
| AAGTTCCATACTTAAGGCCA+GGG | + | chr3.4:90674639-90674658 | MS.gene37487:intron | 40.0% | |
| AATGCACTGTTATCCACTCA+TGG | - | chr3.4:90674036-90674055 | None:intergenic | 40.0% | |
| ACACAAGAATTACAAGGAGG+AGG | + | chr3.4:90674485-90674504 | MS.gene37487:intron | 40.0% | |
| AGGTTGGATGCTATTAGAGA+GGG | + | chr3.4:90674688-90674707 | MS.gene37487:intron | 40.0% | |
| CCGTATTTGAATGTATTCCG+TGG | + | chr3.4:90675153-90675172 | MS.gene37487:intron | 40.0% | |
| CTTCACAGAACAAATGGATG+AGG | + | chr3.4:90675340-90675359 | MS.gene37487:CDS | 40.0% | |
| CTTCTTCGTTTCTGTATCAG+TGG | - | chr3.4:90673407-90673426 | None:intergenic | 40.0% | |
| GAATCCTATCGTCAATGCAT+TGG | + | chr3.4:90674733-90674752 | MS.gene37487:intron | 40.0% | |
| GAGAGAGGCTTACAAAGATA+GGG | + | chr3.4:90674314-90674333 | MS.gene37487:intron | 40.0% | |
| GATGATTGAAGTCTTCTTGC+AGG | + | chr3.4:90674837-90674856 | MS.gene37487:intron | 40.0% | |
| GTAACTACAGGAACAGTAGT+AGG | + | chr3.4:90673739-90673758 | MS.gene37487:CDS | 40.0% | |
| GTCACATGTTAGTCACAATG+TGG | + | chr3.4:90673939-90673958 | MS.gene37487:intron | 40.0% | |
| TAAGTTCCATACTTAAGGCC+AGG | + | chr3.4:90674638-90674657 | MS.gene37487:intron | 40.0% | |
| TATGCTTCGTCTACCAGATT+CGG | + | chr3.4:90673712-90673731 | MS.gene37487:intron | 40.0% | |
| TGAGAAAGGGGAATGCTAAT+GGG | - | chr3.4:90673462-90673481 | None:intergenic | 40.0% | |
| TGAGAGAGGCTTACAAAGAT+AGG | + | chr3.4:90674313-90674332 | MS.gene37487:intron | 40.0% | |
| TGTGAAGAAGTAACATCGGT+AGG | - | chr3.4:90675327-90675346 | None:intergenic | 40.0% | |
| TTGAGAAAGGGGAATGCTAA+TGG | - | chr3.4:90673463-90673482 | None:intergenic | 40.0% | |
| ! | AGAAGAACGTCTCGTTTTGT+TGG | + | chr3.4:90673422-90673441 | MS.gene37487:CDS | 40.0% |
| ! | TAGGTTGGATGCTATTAGAG+AGG | + | chr3.4:90674687-90674706 | MS.gene37487:intron | 40.0% |
| ! | TCTACGTAAATGGATTCCCT+AGG | - | chr3.4:90674874-90674893 | None:intergenic | 40.0% |
| !! | AAAATGGGATGCTTTTGAGG+TGG | + | chr3.4:90674577-90674596 | MS.gene37487:intron | 40.0% |
| !! | AAGAACGTCTCGTTTTGTTG+GGG | + | chr3.4:90673424-90673443 | MS.gene37487:CDS | 40.0% |
| !! | AATTTTGCCGCTGTTTTACC+TGG | + | chr3.4:90673780-90673799 | MS.gene37487:CDS | 40.0% |
| !! | AGAGTTTCGCGAGTTGTTTT+TGG | + | chr3.4:90674423-90674442 | MS.gene37487:intron | 40.0% |
| !! | GAAGAACGTCTCGTTTTGTT+GGG | + | chr3.4:90673423-90673442 | MS.gene37487:CDS | 40.0% |
| !! | TGAGGTGGTTGAGTTGAAAA+GGG | + | chr3.4:90674592-90674611 | MS.gene37487:intron | 40.0% |
| !! | TTGAGGTGGTTGAGTTGAAA+AGG | + | chr3.4:90674591-90674610 | MS.gene37487:intron | 40.0% |
| AAACCAGGTAAGAACAAGCC+TGG | - | chr3.4:90673880-90673899 | None:intergenic | 45.0% | |
| ACAATCCAAGCAAGGTCTTG+AGG | + | chr3.4:90675287-90675306 | MS.gene37487:CDS | 45.0% | |
| ACCTAGATTCTCCACGGTTA+GGG | + | chr3.4:90674711-90674730 | MS.gene37487:intron | 45.0% | |
| ACTACAGGAACAGTAGTAGG+TGG | + | chr3.4:90673742-90673761 | MS.gene37487:CDS | 45.0% | |
| AGATGGGGGATTTGAGAAAG+GGG | - | chr3.4:90673474-90673493 | None:intergenic | 45.0% | |
| AGCTAAGGAGTGGAGAAGTT+TGG | - | chr3.4:90673554-90673573 | None:intergenic | 45.0% | |
| ATTCCATAACACGTGCCTAC+AGG | + | chr3.4:90673618-90673637 | MS.gene37487:CDS | 45.0% | |
| CACAGAACAAATGGATGAGG+CGG | + | chr3.4:90675343-90675362 | MS.gene37487:CDS | 45.0% | |
| CTACAGGAACAGTAGTAGGT+GGG | + | chr3.4:90673743-90673762 | MS.gene37487:CDS | 45.0% | |
| CTTCGTTTCTGTATCAGTGG+TGG | - | chr3.4:90673404-90673423 | None:intergenic | 45.0% | |
| GAAGTTACAGCATACGCATC+AGG | - | chr3.4:90674987-90675006 | None:intergenic | 45.0% | |
| GAGAAAGGGGAATGCTAATG+GGG | - | chr3.4:90673461-90673480 | None:intergenic | 45.0% | |
| GAGATGGGGGATTTGAGAAA+GGG | - | chr3.4:90673475-90673494 | None:intergenic | 45.0% | |
| GCACGTGTTATGGAATTGAG+AGG | - | chr3.4:90673614-90673633 | None:intergenic | 45.0% | |
| GGAATCACCAGGTAAAACAG+CGG | - | chr3.4:90673790-90673809 | None:intergenic | 45.0% | |
| GTCACAGAACAATCCAAGCA+AGG | + | chr3.4:90675279-90675298 | MS.gene37487:CDS | 45.0% | |
| TAACATGTGACTGACCTGAG+AGG | - | chr3.4:90673930-90673949 | None:intergenic | 45.0% | |
| TAACCTGTAGGCACGTGTTA+TGG | - | chr3.4:90673624-90673643 | None:intergenic | 45.0% | |
| TAAGGCCAGGGAATTCCAAT+GGG | + | chr3.4:90674651-90674670 | MS.gene37487:intron | 45.0% | |
| TACAATCCAACACCTCCCAT+TGG | - | chr3.4:90674669-90674688 | None:intergenic | 45.0% | |
| TGCTTGGATTGTTCTGTGAC+TGG | - | chr3.4:90675279-90675298 | None:intergenic | 45.0% | |
| TGGGAGTAGCTCACAAAGAT+AGG | - | chr3.4:90674131-90674150 | None:intergenic | 45.0% | |
| TGTAGTTACTGCACCGAATC+TGG | - | chr3.4:90673728-90673747 | None:intergenic | 45.0% | |
| TTAAGGCCAGGGAATTCCAA+TGG | + | chr3.4:90674650-90674669 | MS.gene37487:intron | 45.0% | |
| TTTGTTGAAATGCAAGGGCG+TGG | + | chr3.4:90674069-90674088 | MS.gene37487:intron | 45.0% | |
| ! | ATTATCGACGGCGTTGGAAA+TGG | - | chr3.4:90673527-90673546 | None:intergenic | 45.0% |
| ! | TGTTTTACCTGGTGATTCCG+TGG | + | chr3.4:90673791-90673810 | MS.gene37487:CDS | 45.0% |
| ! | TTGTTGAAATGCAAGGGCGT+GGG | + | chr3.4:90674070-90674089 | MS.gene37487:intron | 45.0% |
| !! | AATGGGAGGTGTTGGATTGT+AGG | + | chr3.4:90674668-90674687 | MS.gene37487:intron | 45.0% |
| !! | AGATTCGGTGCAGTAACTAC+AGG | + | chr3.4:90673727-90673746 | MS.gene37487:intron | 45.0% |
| !! | GAATTCCCTGGCCTTAAGTA+TGG | - | chr3.4:90674647-90674666 | None:intergenic | 45.0% |
| !!! | GAAGGGGTTTTGAGAAGCTA+AGG | - | chr3.4:90673569-90673588 | None:intergenic | 45.0% |
| !!! | GGTTTTGAGAAGCTAAGGAG+TGG | - | chr3.4:90673564-90673583 | None:intergenic | 45.0% |
| AAATGGATGAGGCGGCTTCA+AGG | + | chr3.4:90675351-90675370 | MS.gene37487:CDS | 50.0% | |
| AATGGATGAGGCGGCTTCAA+GGG | + | chr3.4:90675352-90675371 | MS.gene37487:CDS | 50.0% | |
| ACGATAGGATTCCCTAACCG+TGG | - | chr3.4:90674725-90674744 | None:intergenic | 50.0% | |
| AGAGATCCAGTCCTCCAAGA+GGG | - | chr3.4:90675188-90675207 | None:intergenic | 50.0% | |
| AGAGGGACCTAGATTCTCCA+CGG | + | chr3.4:90674705-90674724 | MS.gene37487:intron | 50.0% | |
| AGGGGAGAAATTGGAGATGG+GGG | - | chr3.4:90673488-90673507 | None:intergenic | 50.0% | |
| GAAATGGATGTGGGGAGTTG+TGG | - | chr3.4:90673511-90673530 | None:intergenic | 50.0% | |
| GACCTAGATTCTCCACGGTT+AGG | + | chr3.4:90674710-90674729 | MS.gene37487:intron | 50.0% | |
| GAGGGGAGAAATTGGAGATG+GGG | - | chr3.4:90673489-90673508 | None:intergenic | 50.0% | |
| GAGTTGTGGAGGGGAGAAAT+TGG | - | chr3.4:90673497-90673516 | None:intergenic | 50.0% | |
| GGAACAATTATCGACGGCGT+TGG | - | chr3.4:90673533-90673552 | None:intergenic | 50.0% | |
| GGAGATGGGGGATTTGAGAA+AGG | - | chr3.4:90673476-90673495 | None:intergenic | 50.0% | |
| GGAGGGGAGAAATTGGAGAT+GGG | - | chr3.4:90673490-90673509 | None:intergenic | 50.0% | |
| GGATTCCCTAGGTCAGATAG+TGG | - | chr3.4:90674863-90674882 | None:intergenic | 50.0% | |
| TCCCTAACCGTGGAGAATCT+AGG | - | chr3.4:90674715-90674734 | None:intergenic | 50.0% | |
| TCTTGCCTCAAGACCTTGCT+TGG | - | chr3.4:90675295-90675314 | None:intergenic | 50.0% | |
| TGCAACAGCAGTGCTAGTGA+AGG | - | chr3.4:90675241-90675260 | None:intergenic | 50.0% | |
| TGGAGGGGAGAAATTGGAGA+TGG | - | chr3.4:90673491-90673510 | None:intergenic | 50.0% | |
| ! | ACGGCGTTGGAAATGGATGT+GGG | - | chr3.4:90673520-90673539 | None:intergenic | 50.0% |
| ! | CTTGAGTAGCGGGATGCAAT+TGG | + | chr3.4:90674899-90674918 | MS.gene37487:intron | 50.0% |
| ! | GGAATTCCAATGGGAGGTGT+TGG | + | chr3.4:90674660-90674679 | MS.gene37487:intron | 50.0% |
| ! | GGCTCCAATGCATTGACGAT+AGG | - | chr3.4:90674740-90674759 | None:intergenic | 50.0% |
| ! | TGTTGAAATGCAAGGGCGTG+GGG | + | chr3.4:90674071-90674090 | MS.gene37487:intron | 50.0% |
| ! | TTGCCAGGCTTGTTCTTACC+TGG | + | chr3.4:90673874-90673893 | MS.gene37487:CDS | 50.0% |
| !! | GGAGGTGTTGGATTGTAGGT+TGG | + | chr3.4:90674672-90674691 | MS.gene37487:intron | 50.0% |
| !! | GGCAGAGACTGATTTGAGAG+AGG | + | chr3.4:90674299-90674318 | MS.gene37487:intron | 50.0% |
| AACAAGCCTGGCAACGAGCA+AGG | - | chr3.4:90673868-90673887 | None:intergenic | 55.0% | |
| ACAACACCTTGCTCGTTGCC+AGG | + | chr3.4:90673859-90673878 | MS.gene37487:CDS | 55.0% | |
| AGATCCAGTCCTCCAAGAGG+GGG | - | chr3.4:90675186-90675205 | None:intergenic | 55.0% | |
| ATGAGGCGGCTTCAAGGGAT+CGG | + | chr3.4:90675357-90675376 | MS.gene37487:CDS | 55.0% | |
| ATGGATGTGGGGAGTTGTGG+AGG | - | chr3.4:90673508-90673527 | None:intergenic | 55.0% | |
| CACCTCCCATTGGAATTCCC+TGG | - | chr3.4:90674659-90674678 | None:intergenic | 55.0% | |
| CTGTGACTGGAAGCTCAGCA+GGG | - | chr3.4:90675266-90675285 | None:intergenic | 55.0% | |
| GAGAGATCCAGTCCTCCAAG+AGG | - | chr3.4:90675189-90675208 | None:intergenic | 55.0% | |
| GAGATCCAGTCCTCCAAGAG+GGG | - | chr3.4:90675187-90675206 | None:intergenic | 55.0% | |
| GCAGGCCACTATCTGACCTA+GGG | + | chr3.4:90674855-90674874 | MS.gene37487:intron | 55.0% | |
| TCTGTGACTGGAAGCTCAGC+AGG | - | chr3.4:90675267-90675286 | None:intergenic | 55.0% | |
| TGACCTGAGAGGAGCAACGA+TGG | - | chr3.4:90673919-90673938 | None:intergenic | 55.0% | |
| TGCAGGCCACTATCTGACCT+AGG | + | chr3.4:90674854-90674873 | MS.gene37487:intron | 55.0% | |
| TGGATGTGGGGAGTTGTGGA+GGG | - | chr3.4:90673507-90673526 | None:intergenic | 55.0% | |
| TTACCTGGTGATTCCGTGGC+TGG | + | chr3.4:90673795-90673814 | MS.gene37487:CDS | 55.0% | |
| ! | CAAGGGCGTGGGGTTATTAG+TGG | + | chr3.4:90674081-90674100 | MS.gene37487:intron | 55.0% |
| ! | CGGCGTTGGAAATGGATGTG+GGG | - | chr3.4:90673519-90673538 | None:intergenic | 55.0% |
| ! | GACGGCGTTGGAAATGGATG+TGG | - | chr3.4:90673521-90673540 | None:intergenic | 55.0% |
| ! | GCTGGCTTAGTGGTGGCTAA+TGG | + | chr3.4:90673813-90673832 | MS.gene37487:CDS | 55.0% |
| !! | AGGAGGAGCGTTAGGAAACC+AGG | - | chr3.4:90673895-90673914 | None:intergenic | 55.0% |
| !! | TGATTCCGTGGCTGGCTTAG+TGG | + | chr3.4:90673803-90673822 | MS.gene37487:CDS | 55.0% |
| AAGCCAGCCACGGAATCACC+AGG | - | chr3.4:90673801-90673820 | None:intergenic | 60.0% | |
| AGAGGAGCAACGATGGCAGG+AGG | - | chr3.4:90673912-90673931 | None:intergenic | 60.0% | |
| AGCCACCACTAAGCCAGCCA+CGG | - | chr3.4:90673811-90673830 | None:intergenic | 60.0% | |
| CAAGAGGGGGGATAAGCCCA+CGG | - | chr3.4:90675173-90675192 | None:intergenic | 60.0% | |
| CTGAGAGGAGCAACGATGGC+AGG | - | chr3.4:90673915-90673934 | None:intergenic | 60.0% | |
| CTGCCATCGTTGCTCCTCTC+AGG | + | chr3.4:90673913-90673932 | MS.gene37487:CDS | 60.0% | |
| GATCCAGTCCTCCAAGAGGG+GGG | - | chr3.4:90675185-90675204 | None:intergenic | 60.0% | |
| GGATGTGGGGAGTTGTGGAG+GGG | - | chr3.4:90673506-90673525 | None:intergenic | 60.0% | |
| GGCCAGGGAATTCCAATGGG+AGG | + | chr3.4:90674654-90674673 | MS.gene37487:intron | 60.0% | |
| TATCCCCCCTCTTGGAGGAC+TGG | + | chr3.4:90675179-90675198 | MS.gene37487:intron | 60.0% | |
| TGAGGCGGCTTCAAGGGATC+GGG | + | chr3.4:90675358-90675377 | MS.gene37487:CDS | 60.0% | |
| !! | ACGATGGCAGGAGGAGCGTT+AGG | - | chr3.4:90673903-90673922 | None:intergenic | 60.0% |
| !! | TTCCGTGGCTGGCTTAGTGG+TGG | + | chr3.4:90673806-90673825 | MS.gene37487:CDS | 60.0% |
| CGTGGGCTTATCCCCCCTCT+TGG | + | chr3.4:90675171-90675190 | MS.gene37487:intron | 65.0% | |
| GGGCTTATCCCCCCTCTTGG+AGG | + | chr3.4:90675174-90675193 | MS.gene37487:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 90673376 | 90675407 | 90673376 | ID=MS.gene37487 |
| chr3.4 | mRNA | 90673376 | 90675407 | 90673376 | ID=MS.gene37487.t1;Parent=MS.gene37487 |
| chr3.4 | exon | 90673376 | 90673639 | 90673376 | ID=MS.gene37487.t1.exon1;Parent=MS.gene37487.t1 |
| chr3.4 | CDS | 90673376 | 90673639 | 90673376 | ID=cds.MS.gene37487.t1;Parent=MS.gene37487.t1 |
| chr3.4 | exon | 90673729 | 90673934 | 90673729 | ID=MS.gene37487.t1.exon2;Parent=MS.gene37487.t1 |
| chr3.4 | CDS | 90673729 | 90673934 | 90673729 | ID=cds.MS.gene37487.t1;Parent=MS.gene37487.t1 |
| chr3.4 | exon | 90675248 | 90675407 | 90675248 | ID=MS.gene37487.t1.exon3;Parent=MS.gene37487.t1 |
| chr3.4 | CDS | 90675248 | 90675407 | 90675248 | ID=cds.MS.gene37487.t1;Parent=MS.gene37487.t1 |
| Gene Sequence |
| Protein sequence |
