Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061628.t1 | XP_013467217.1 | 99.7 | 328 | 1 | 0 | 1 | 328 | 1 | 328 | 1.30E-189 | 672.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061628.t1 | O23016 | 83.5 | 328 | 54 | 0 | 1 | 328 | 1 | 328 | 1.4e-165 | 583.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061628.t1 | I3S210 | 99.7 | 328 | 1 | 0 | 1 | 328 | 1 | 328 | 9.0e-190 | 672.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061628.t1 | MTR_1g047250 | 99.695 | 328 | 1 | 0 | 1 | 328 | 1 | 328 | 0.0 | 679 |
| MS.gene061628.t1 | MTR_7g114990 | 30.915 | 317 | 200 | 9 | 5 | 317 | 17 | 318 | 7.08e-32 | 122 |
| MS.gene061628.t1 | MTR_7g114980 | 30.721 | 319 | 172 | 12 | 6 | 301 | 16 | 308 | 5.32e-28 | 112 |
| MS.gene061628.t1 | MTR_7g115010 | 29.904 | 311 | 168 | 12 | 5 | 301 | 13 | 287 | 2.15e-27 | 109 |
| MS.gene061628.t1 | MTR_1g102750 | 28.662 | 314 | 182 | 10 | 6 | 301 | 10 | 299 | 2.33e-27 | 110 |
| MS.gene061628.t1 | MTR_7g114970 | 30.164 | 305 | 189 | 9 | 6 | 301 | 12 | 301 | 4.86e-27 | 108 |
| MS.gene061628.t1 | MTR_7g114970 | 34.043 | 235 | 139 | 7 | 5 | 233 | 11 | 235 | 1.65e-26 | 106 |
| MS.gene061628.t1 | MTR_7g114970 | 34.043 | 235 | 139 | 7 | 5 | 233 | 11 | 235 | 1.73e-26 | 106 |
| MS.gene061628.t1 | MTR_7g114980 | 31.379 | 290 | 150 | 12 | 6 | 272 | 16 | 279 | 6.79e-26 | 105 |
| MS.gene061628.t1 | MTR_1g042730 | 27.147 | 361 | 208 | 11 | 1 | 318 | 61 | 409 | 1.28e-25 | 106 |
| MS.gene061628.t1 | MTR_1g102750 | 28.866 | 291 | 165 | 10 | 6 | 278 | 10 | 276 | 2.26e-25 | 103 |
| MS.gene061628.t1 | MTR_7g021680 | 27.914 | 326 | 201 | 11 | 6 | 319 | 9 | 312 | 7.14e-23 | 97.4 |
| MS.gene061628.t1 | MTR_7g021820 | 27.914 | 326 | 201 | 11 | 6 | 319 | 9 | 312 | 7.14e-23 | 97.4 |
| MS.gene061628.t1 | MTR_4g092750 | 26.623 | 308 | 188 | 11 | 1 | 298 | 1 | 280 | 4.89e-22 | 94.7 |
| MS.gene061628.t1 | MTR_7g021850 | 27.103 | 321 | 205 | 11 | 6 | 316 | 9 | 310 | 3.54e-21 | 92.8 |
| MS.gene061628.t1 | MTR_4g092750 | 26.710 | 307 | 187 | 11 | 1 | 297 | 1 | 279 | 7.47e-21 | 91.3 |
| MS.gene061628.t1 | MTR_4g092750 | 28.319 | 226 | 141 | 7 | 1 | 216 | 1 | 215 | 3.27e-20 | 89.4 |
| MS.gene061628.t1 | MTR_7g114970 | 33.838 | 198 | 115 | 7 | 5 | 196 | 11 | 198 | 1.45e-18 | 82.8 |
| MS.gene061628.t1 | MTR_8g088160 | 29.412 | 255 | 143 | 8 | 11 | 232 | 49 | 299 | 7.21e-18 | 83.2 |
| MS.gene061628.t1 | MTR_7g114970 | 28.095 | 210 | 134 | 5 | 96 | 301 | 11 | 207 | 1.28e-17 | 81.3 |
| MS.gene061628.t1 | MTR_3g449790 | 28.617 | 311 | 191 | 10 | 6 | 299 | 40 | 336 | 7.06e-17 | 80.9 |
| MS.gene061628.t1 | MTR_3g092140 | 24.633 | 341 | 218 | 14 | 2 | 323 | 35 | 355 | 3.14e-16 | 79.7 |
| MS.gene061628.t1 | MTR_3g449790 | 28.617 | 311 | 185 | 10 | 6 | 299 | 40 | 330 | 1.00e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061628.t1 | AT1G04690 | 83.537 | 328 | 54 | 0 | 1 | 328 | 1 | 328 | 0.0 | 591 |
| MS.gene061628.t1 | AT1G60680 | 27.492 | 331 | 214 | 10 | 6 | 327 | 12 | 325 | 1.84e-25 | 104 |
| MS.gene061628.t1 | AT1G60690 | 28.701 | 331 | 209 | 11 | 6 | 327 | 12 | 324 | 3.60e-25 | 103 |
| MS.gene061628.t1 | AT1G60710 | 28.614 | 332 | 210 | 10 | 5 | 327 | 11 | 324 | 5.43e-25 | 103 |
| MS.gene061628.t1 | AT1G60750 | 28.963 | 328 | 196 | 11 | 6 | 327 | 13 | 309 | 7.56e-25 | 102 |
| MS.gene061628.t1 | AT1G04420 | 28.056 | 360 | 206 | 12 | 1 | 318 | 56 | 404 | 4.87e-24 | 102 |
| MS.gene061628.t1 | AT4G33670 | 26.284 | 331 | 202 | 12 | 1 | 318 | 4 | 305 | 2.20e-22 | 95.9 |
| MS.gene061628.t1 | AT1G60730 | 27.864 | 323 | 204 | 11 | 6 | 318 | 12 | 315 | 2.36e-21 | 93.6 |
| MS.gene061628.t1 | AT1G10810 | 27.707 | 314 | 184 | 11 | 6 | 301 | 12 | 300 | 7.76e-21 | 92.0 |
| MS.gene061628.t1 | AT1G60680 | 30.455 | 220 | 135 | 7 | 5 | 217 | 11 | 219 | 9.54e-20 | 87.0 |
| MS.gene061628.t1 | AT5G53580 | 26.623 | 308 | 189 | 12 | 11 | 299 | 45 | 334 | 8.90e-18 | 83.6 |
| MS.gene061628.t1 | AT1G60730 | 26.239 | 343 | 204 | 12 | 6 | 318 | 12 | 335 | 4.31e-17 | 81.6 |
| MS.gene061628.t1 | AT1G10810 | 29.358 | 218 | 135 | 7 | 5 | 215 | 11 | 216 | 1.16e-16 | 79.0 |
| MS.gene061628.t1 | AT1G06690 | 26.582 | 316 | 191 | 12 | 6 | 299 | 51 | 347 | 2.08e-16 | 79.7 |
| MS.gene061628.t1 | AT1G10810 | 28.968 | 252 | 139 | 10 | 65 | 301 | 22 | 248 | 3.43e-15 | 75.1 |
Find 94 sgRNAs with CRISPR-Local
Find 453 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTTCGACAAAGATCTTC+TGG | 0.250345 | 1.1:-30273794 | MS.gene061628:CDS |
| CTTGCGTCTGGAGTCCTTAC+TGG | 0.288666 | 1.1:-30270320 | MS.gene061628:CDS |
| CTTCCCCTGTATTCTAGTTA+TGG | 0.322795 | 1.1:-30270368 | MS.gene061628:CDS |
| CCTTGACAGCCCCTTATCAT+TGG | 0.341945 | 1.1:+30273758 | None:intergenic |
| TCCAAAGCAAAACGGCTGTC+TGG | 0.347444 | 1.1:+30270272 | None:intergenic |
| ACGCCCAGTTCATCTGCTAT+TGG | 0.347932 | 1.1:+30269624 | None:intergenic |
| AAGCTTGGGCTGTTGCTAAT+AGG | 0.362015 | 1.1:-30273545 | MS.gene061628:CDS |
| TGTTGCTAATAGGTTGGATT+TGG | 0.368859 | 1.1:-30273535 | MS.gene061628:CDS |
| CTTGACAGCCCCTTATCATT+GGG | 0.372160 | 1.1:+30273759 | None:intergenic |
| CTGTATGAATCAGCGCGCTT+TGG | 0.380687 | 1.1:+30268142 | None:intergenic |
| TACGGAGCATGGGTAAGTTT+CGG | 0.389998 | 1.1:-30273975 | MS.gene061628:CDS |
| CGCCGTGGTCGCGGCAGCAT+TGG | 0.390486 | 1.1:+30273916 | None:intergenic |
| CCAAAGCAAAACGGCTGTCT+GGG | 0.403649 | 1.1:+30270273 | None:intergenic |
| CTGTATTCTAGTTATGGAAT+TGG | 0.406038 | 1.1:-30270362 | MS.gene061628:CDS |
| GAAGCCAATAGCAGATGAAC+TGG | 0.416791 | 1.1:-30269628 | MS.gene061628:CDS |
| GCAATTGAAAGCTGTGCTAA+TGG | 0.419930 | 1.1:+30269600 | None:intergenic |
| CAGATAACTGACGAAACATT+AGG | 0.423044 | 1.1:+30269561 | None:intergenic |
| GGACAGGGTCCCAATGATAA+GGG | 0.429176 | 1.1:-30273768 | MS.gene061628:CDS |
| GTCAGCAGATTACTGAAGCT+TGG | 0.429632 | 1.1:-30273560 | MS.gene061628:CDS |
| CCCATGCTCCGTAGGAAAGT+TGG | 0.433619 | 1.1:+30273985 | None:intergenic |
| AAAGATCTTCTGGGGAGGAC+AGG | 0.440562 | 1.1:-30273784 | MS.gene061628:CDS |
| GGTTGATGATGTGCTCAAAA+AGG | 0.442188 | 1.1:-30269661 | MS.gene061628:CDS |
| ACTTGGAGTCCACTTGCGTC+TGG | 0.442488 | 1.1:-30270332 | MS.gene061628:CDS |
| AGGACAGGGTCCCAATGATA+AGG | 0.448157 | 1.1:-30273769 | MS.gene061628:CDS |
| CAATTCCATAACTAGAATAC+AGG | 0.449939 | 1.1:+30270363 | None:intergenic |
| CGGTCGTGCAGAGGAGATCA+TGG | 0.450509 | 1.1:-30273859 | MS.gene061628:CDS |
| TACTCAGGCTGTTCAACAAC+CGG | 0.454974 | 1.1:+30273507 | None:intergenic |
| TACAACAACTTAGGCCGGTC+AGG | 0.459881 | 1.1:-30274020 | MS.gene061628:CDS |
| TCAAAAGCCTTGACTGGAAA+CGG | 0.467921 | 1.1:-30273827 | MS.gene061628:CDS |
| TCAGCAGATTACTGAAGCTT+GGG | 0.470452 | 1.1:-30273559 | MS.gene061628:CDS |
| GAAAGCGTCGTTGAAGAGGC+TGG | 0.471216 | 1.1:-30273715 | MS.gene061628:CDS |
| TGTTTCGACAAAGATCTTCT+GGG | 0.471444 | 1.1:-30273793 | MS.gene061628:CDS |
| CTGAGTATAACCTCTTGAAC+AGG | 0.474892 | 1.1:-30273491 | MS.gene061628:CDS |
| TGGCGCTACAAAAGAGTCTC+AGG | 0.481315 | 1.1:-30269538 | MS.gene061628:intron |
| TAGGTTGGATTTGGTTGGAC+CGG | 0.483964 | 1.1:-30273526 | MS.gene061628:CDS |
| TTGCTTCTTTAACGTCGAGC+TGG | 0.490274 | 1.1:+30273949 | None:intergenic |
| GAGGCTGGGGATGGAGTATG+TGG | 0.500180 | 1.1:-30273700 | MS.gene061628:CDS |
| GCCAACTTTCCTACGGAGCA+TGG | 0.502151 | 1.1:-30273986 | MS.gene061628:CDS |
| GCTAATAGGTTGGATTTGGT+TGG | 0.504199 | 1.1:-30273531 | MS.gene061628:CDS |
| TTAGATTCATGAGAATATGA+AGG | 0.510165 | 1.1:-30268233 | MS.gene061628:intron |
| TTGGGCTGTTGCTAATAGGT+TGG | 0.517426 | 1.1:-30273541 | MS.gene061628:CDS |
| TTACCTTGTGCCTGTTCAAG+AGG | 0.520428 | 1.1:+30273481 | None:intergenic |
| AAAGCGTCGTTGAAGAGGCT+GGG | 0.522114 | 1.1:-30273714 | MS.gene061628:CDS |
| GAATCTTGCATCTCGGTCAC+TGG | 0.522615 | 1.1:-30269682 | MS.gene061628:CDS |
| AAGCAATCAAAAGCCTTGAC+TGG | 0.525793 | 1.1:-30273833 | MS.gene061628:CDS |
| ACTACTAACTCCTGCTGTGA+TGG | 0.528455 | 1.1:-30268194 | MS.gene061628:CDS |
| TGTCAGACCGTTTCCAGTCA+AGG | 0.529860 | 1.1:+30273820 | None:intergenic |
| AACTGACGAAACATTAGGAT+TGG | 0.534487 | 1.1:+30269566 | None:intergenic |
| TGGATGTTGTGTATTGTCAT+AGG | 0.535817 | 1.1:-30273680 | MS.gene061628:CDS |
| TCAATCTTCTCCATCACAGC+AGG | 0.538974 | 1.1:+30268184 | None:intergenic |
| CTTACTGGAAAATACAAGAA+AGG | 0.542569 | 1.1:-30270305 | MS.gene061628:CDS |
| AGAAGTTTACGCCGTGGTCG+CGG | 0.546157 | 1.1:+30273907 | None:intergenic |
| ATGGAATTGGTCTCACCACT+TGG | 0.547573 | 1.1:-30270349 | MS.gene061628:CDS |
| GGTCGCGGCAGCATTGGAGA+AGG | 0.547765 | 1.1:+30273922 | None:intergenic |
| CTCCAATGCTGCCGCGACCA+CGG | 0.550788 | 1.1:-30273918 | MS.gene061628:CDS |
| GATCTCCTCTGCACGACCGT+TGG | 0.555069 | 1.1:+30273863 | None:intergenic |
| GGACGAAAGCGTCGTTGAAG+AGG | 0.555165 | 1.1:-30273719 | MS.gene061628:CDS |
| TGCAATACAACAACTTAGGC+CGG | 0.558257 | 1.1:-30274025 | MS.gene061628:CDS |
| AAGATGCAATACAACAACTT+AGG | 0.560476 | 1.1:-30274029 | MS.gene061628:CDS |
| TGCTGTGATGGAGAAGATTG+AGG | 0.560987 | 1.1:-30268182 | MS.gene061628:CDS |
| TCAAGGAAGCATATTGTGGA+AGG | 0.565585 | 1.1:-30273741 | MS.gene061628:CDS |
| CAAAGCAAAACGGCTGTCTG+GGG | 0.571435 | 1.1:+30270274 | None:intergenic |
| CCAATGATAAGGGGCTGTCA+AGG | 0.576320 | 1.1:-30273758 | MS.gene061628:CDS |
| AAGATCTTCTGGGGAGGACA+GGG | 0.579543 | 1.1:-30273783 | MS.gene061628:CDS |
| GTCGTTGAAGAGGCTGGGGA+TGG | 0.582056 | 1.1:-30273709 | MS.gene061628:CDS |
| CCAACTTTCCTACGGAGCAT+GGG | 0.588169 | 1.1:-30273985 | MS.gene061628:CDS |
| GTCGCGGCAGCATTGGAGAA+GGG | 0.588190 | 1.1:+30273923 | None:intergenic |
| AAGCGTCGTTGAAGAGGCTG+GGG | 0.588685 | 1.1:-30273713 | MS.gene061628:CDS |
| TAGCACAGCTTTCAATTGCG+TGG | 0.595497 | 1.1:-30269596 | MS.gene061628:CDS |
| TCGATCGGCGTACAAACATC+CGG | 0.595941 | 1.1:+30273657 | None:intergenic |
| GCTCTTACAGTCTCCTCGAT+CGG | 0.600379 | 1.1:+30273642 | None:intergenic |
| TGTTGTAGAATCTTGCATCT+CGG | 0.602036 | 1.1:-30269689 | MS.gene061628:intron |
| GTTTCGACAAAGATCTTCTG+GGG | 0.610966 | 1.1:-30273792 | MS.gene061628:CDS |
| AAAGTCAGCCAACTTTCCTA+CGG | 0.613030 | 1.1:-30273993 | MS.gene061628:CDS |
| GGTCGTGCAGAGGAGATCAT+GGG | 0.615148 | 1.1:-30273858 | MS.gene061628:CDS |
| CTACGCCAACGGTCGTGCAG+AGG | 0.617875 | 1.1:-30273868 | MS.gene061628:CDS |
| TGTTGTGTATTGTCATAGGC+CGG | 0.619959 | 1.1:-30273676 | MS.gene061628:CDS |
| AAAGCAAAACGGCTGTCTGG+GGG | 0.620635 | 1.1:+30270275 | None:intergenic |
| AATGTTTCGTCAGTTATCTG+TGG | 0.624642 | 1.1:-30269558 | MS.gene061628:CDS |
| GAAACTTACCCATGCTCCGT+AGG | 0.626170 | 1.1:+30273977 | None:intergenic |
| GTAAGGACTCCAGACGCAAG+TGG | 0.627062 | 1.1:+30270323 | None:intergenic |
| GACAGGGTCCCAATGATAAG+GGG | 0.628521 | 1.1:-30273767 | MS.gene061628:CDS |
| AAGCCAATAGCAGATGAACT+GGG | 0.634352 | 1.1:-30269627 | MS.gene061628:CDS |
| GCTGTCAAGGAAGCATATTG+TGG | 0.641699 | 1.1:-30273745 | MS.gene061628:CDS |
| TCGACAAAGATCTTCTGGGG+AGG | 0.642624 | 1.1:-30273789 | MS.gene061628:CDS |
| CAAGGAAGCATATTGTGGAA+GGG | 0.642907 | 1.1:-30273740 | MS.gene061628:CDS |
| GGATGTTTGTACGCCGATCG+AGG | 0.647826 | 1.1:-30273655 | MS.gene061628:CDS |
| CTGTTCAAGAGGTTATACTC+AGG | 0.655970 | 1.1:+30273492 | None:intergenic |
| AACGCAGAAGTCTACGCCAA+CGG | 0.656202 | 1.1:-30273879 | MS.gene061628:CDS |
| TAACCTCTTGAACAGGCACA+AGG | 0.657377 | 1.1:-30273484 | MS.gene061628:intron |
| AGACGCAAGTGGACTCCAAG+TGG | 0.662326 | 1.1:+30270334 | None:intergenic |
| AATTCCATAACTAGAATACA+GGG | 0.664677 | 1.1:+30270364 | None:intergenic |
| TGTCGAAGAAGTTTACGCCG+TGG | 0.679789 | 1.1:+30273901 | None:intergenic |
| ATTCCATAACTAGAATACAG+GGG | 0.746347 | 1.1:+30270365 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATTAAATTTAAAA+AGG | - | chr1.1:30270191-30270210 | MS.gene061628:intron | 0.0% |
| !! | TTTAAAAAGAAAACTAAAAA+AGG | + | chr1.1:30271946-30271965 | None:intergenic | 10.0% |
| !!! | TTAACCTTTTTATATAAAAA+TGG | - | chr1.1:30269379-30269398 | MS.gene061628:intron | 10.0% |
| !! | AAAACACAAACATTAAATAA+AGG | - | chr1.1:30269702-30269721 | MS.gene061628:intron | 15.0% |
| !! | AAAATAAAAGCTTATTTAGT+TGG | - | chr1.1:30268921-30268940 | MS.gene061628:intron | 15.0% |
| !! | AAACACAAACATTAAATAAA+GGG | - | chr1.1:30269703-30269722 | MS.gene061628:intron | 15.0% |
| !! | ACAAGGTAATAAAAAATTTA+AGG | - | chr1.1:30271920-30271939 | MS.gene061628:intron | 15.0% |
| !! | AGATAAAAGTTACATATAAA+TGG | + | chr1.1:30273702-30273721 | None:intergenic | 15.0% |
| !! | ATACTAATAAATAATTGCAT+TGG | + | chr1.1:30269610-30269629 | None:intergenic | 15.0% |
| !! | TCATAAACTACATTTAAATT+TGG | + | chr1.1:30272036-30272055 | None:intergenic | 15.0% |
| !!! | AATTTTCTTATATATATGAC+CGG | - | chr1.1:30269805-30269824 | MS.gene061628:intron | 15.0% |
| !!! | ATTTGTTAAATTCCTTAAAT+GGG | + | chr1.1:30273218-30273237 | None:intergenic | 15.0% |
| !!! | TAAGCCATTTTTATATAAAA+AGG | + | chr1.1:30269386-30269405 | None:intergenic | 15.0% |
| !!! | TATTTGTTAAATTCCTTAAA+TGG | + | chr1.1:30273219-30273238 | None:intergenic | 15.0% |
| !!! | TGTGATATTTTCTTATAATT+TGG | - | chr1.1:30269764-30269783 | MS.gene061628:intron | 15.0% |
| !!! | TTTGTGTTTTTAATATTAGT+AGG | + | chr1.1:30269692-30269711 | None:intergenic | 15.0% |
| !! | AAACAGAACCATATATATAT+TGG | + | chr1.1:30269295-30269314 | None:intergenic | 20.0% |
| !! | AAAGATTAATCAACACTAAA+CGG | + | chr1.1:30270307-30270326 | None:intergenic | 20.0% |
| !! | AAATTATGTTGATATAAGGA+CGG | + | chr1.1:30273356-30273375 | None:intergenic | 20.0% |
| !! | ACAGAAATTATGTTGATATA+AGG | + | chr1.1:30273360-30273379 | None:intergenic | 20.0% |
| !! | ACTAATAAATACTGAGAATT+AGG | - | chr1.1:30272901-30272920 | MS.gene061628:intron | 20.0% |
| !! | ATAACATCGTTAAAATTGTT+GGG | + | chr1.1:30269932-30269951 | None:intergenic | 20.0% |
| !! | ATACATCAGCAATTTAAATT+TGG | + | chr1.1:30270165-30270184 | None:intergenic | 20.0% |
| !! | CAAGAAATTAAAACAAAGAA+TGG | - | chr1.1:30273033-30273052 | MS.gene061628:intron | 20.0% |
| !! | CTAATAAATACTGAGAATTA+GGG | - | chr1.1:30272902-30272921 | MS.gene061628:intron | 20.0% |
| !! | TAATAAATACTGAGAATTAG+GGG | - | chr1.1:30272903-30272922 | MS.gene061628:intron | 20.0% |
| !! | TACTTTCTCCAATATATATA+TGG | - | chr1.1:30269284-30269303 | MS.gene061628:intron | 20.0% |
| !! | TATAACATCGTTAAAATTGT+TGG | + | chr1.1:30269933-30269952 | None:intergenic | 20.0% |
| !! | TATTATGACCATAATAATGT+TGG | - | chr1.1:30268757-30268776 | MS.gene061628:intron | 20.0% |
| !!! | AATATATATATGGTTCTGTT+TGG | - | chr1.1:30269294-30269313 | MS.gene061628:intron | 20.0% |
| !!! | ATCAAAGTTGTTAGTTTTTT+TGG | - | chr1.1:30270253-30270272 | MS.gene061628:intron | 20.0% |
| !!! | ATGAATTTTGTTATTGATCA+AGG | - | chr1.1:30268546-30268565 | MS.gene061628:intron | 20.0% |
| !!! | ATGCATCATTTCATTTTAAT+TGG | - | chr1.1:30271714-30271733 | MS.gene061628:intron | 20.0% |
| !!! | ATGCTTTACAATTTTTTATG+AGG | + | chr1.1:30269661-30269680 | None:intergenic | 20.0% |
| !!! | ATTTAGTGAAGGATAAATTT+TGG | + | chr1.1:30271632-30271651 | None:intergenic | 20.0% |
| !!! | GAATAACATAGAAACTATTT+TGG | - | chr1.1:30272152-30272171 | MS.gene061628:intron | 20.0% |
| !!! | GCTTTTTTTTCTTTATTCTT+TGG | + | chr1.1:30273665-30273684 | None:intergenic | 20.0% |
| !!! | GTAACTTTTATCTTAATTTG+TGG | - | chr1.1:30273709-30273728 | MS.gene061628:CDS | 20.0% |
| !!! | GTTTTCACAAGTTTTTTTTT+TGG | - | chr1.1:30269251-30269270 | MS.gene061628:intron | 20.0% |
| !!! | TATCTTGTTTATTCTTTAGT+TGG | - | chr1.1:30271187-30271206 | MS.gene061628:intron | 20.0% |
| !!! | TGCTTTACAATTTTTTATGA+GGG | + | chr1.1:30269660-30269679 | None:intergenic | 20.0% |
| !!! | TGGTTTTTCTTCTTATATTA+AGG | + | chr1.1:30269573-30269592 | None:intergenic | 20.0% |
| !!! | TTGATGTCATTTTTAATTTG+AGG | - | chr1.1:30273842-30273861 | MS.gene061628:CDS | 20.0% |
| !!! | TTTTTTTATCAATAGCGTAA+AGG | + | chr1.1:30270136-30270155 | None:intergenic | 20.0% |
| ! | AACCTATATGTCAATTTAGA+AGG | + | chr1.1:30272358-30272377 | None:intergenic | 25.0% |
| ! | AAGATTCTTAGTGAAATCAA+AGG | - | chr1.1:30270870-30270889 | MS.gene061628:intron | 25.0% |
| ! | AATTCCATAACTAGAATACA+GGG | + | chr1.1:30271803-30271822 | None:intergenic | 25.0% |
| ! | AATTTCATTGATGTGAAGTT+TGG | - | chr1.1:30271317-30271336 | MS.gene061628:intron | 25.0% |
| ! | ACCATAATAATGTTGGATTT+AGG | - | chr1.1:30268764-30268783 | MS.gene061628:intron | 25.0% |
| ! | AGTACACAACATATCAAATA+TGG | + | chr1.1:30269093-30269112 | None:intergenic | 25.0% |
| ! | ATAAGGGGACAAAATTATAA+TGG | + | chr1.1:30273763-30273782 | None:intergenic | 25.0% |
| ! | ATAGAGATCATAATATGTGA+GGG | - | chr1.1:30272188-30272207 | MS.gene061628:intron | 25.0% |
| ! | ATCAATGAAATTTAGATTCG+TGG | + | chr1.1:30271309-30271328 | None:intergenic | 25.0% |
| ! | GTACACAACATATCAAATAT+GGG | + | chr1.1:30269092-30269111 | None:intergenic | 25.0% |
| ! | TAACATCGTTAAAATTGTTG+GGG | + | chr1.1:30269931-30269950 | None:intergenic | 25.0% |
| ! | TACCAATTTATCATCCATAA+GGG | + | chr1.1:30268996-30269015 | None:intergenic | 25.0% |
| ! | TCAACAAATCTCAACAAAAT+TGG | + | chr1.1:30268717-30268736 | None:intergenic | 25.0% |
| ! | TCCTAAATCCAACATTATTA+TGG | + | chr1.1:30268768-30268787 | None:intergenic | 25.0% |
| ! | TCTTACAAAGAGATACAAAT+GGG | + | chr1.1:30271060-30271079 | None:intergenic | 25.0% |
| ! | TGCAATAAAATAGAAGACAA+AGG | - | chr1.1:30273257-30273276 | MS.gene061628:intron | 25.0% |
| ! | TTAGATTCATGAGAATATGA+AGG | - | chr1.1:30273931-30273950 | MS.gene061628:CDS | 25.0% |
| ! | TTCTTACAAAGAGATACAAA+TGG | + | chr1.1:30271061-30271080 | None:intergenic | 25.0% |
| ! | TTTATTCTTTAGTTGGATTG+TGG | - | chr1.1:30271194-30271213 | MS.gene061628:intron | 25.0% |
| ! | TTTCTTCTTATATTAAGGAC+CGG | + | chr1.1:30269568-30269587 | None:intergenic | 25.0% |
| !! | ATTCTCAAGACATTTTTACA+AGG | - | chr1.1:30272660-30272679 | MS.gene061628:intron | 25.0% |
| !! | ATTTTCCTATGCTTAAATCT+AGG | - | chr1.1:30273804-30273823 | MS.gene061628:CDS | 25.0% |
| !! | ATTTTTACAAGGACATCATT+TGG | - | chr1.1:30272671-30272690 | MS.gene061628:intron | 25.0% |
| !! | GGATAAGATTTGTGTATTTT+GGG | - | chr1.1:30270515-30270534 | MS.gene061628:intron | 25.0% |
| !! | TGCTGATATGTGTAAATTTT+CGG | + | chr1.1:30272313-30272332 | None:intergenic | 25.0% |
| !! | TGTAATTTTCCAAAGCAAAA+CGG | + | chr1.1:30271903-30271922 | None:intergenic | 25.0% |
| !! | TTTTAGATACTAAAGGTTGA+GGG | - | chr1.1:30270680-30270699 | MS.gene061628:intron | 25.0% |
| !! | TTTTTACAAGGACATCATTT+GGG | - | chr1.1:30272672-30272691 | MS.gene061628:intron | 25.0% |
| !!! | AATGTTCTTTGTTTTCCTAA+TGG | - | chr1.1:30272847-30272866 | MS.gene061628:intron | 25.0% |
| !!! | AATTAGACTAGCTCTATATA+AGG | - | chr1.1:30273063-30273082 | MS.gene061628:intron | 25.0% |
| !!! | AGTACTTTTTGTTGGAAATT+GGG | - | chr1.1:30269832-30269851 | MS.gene061628:intron | 25.0% |
| !!! | ATCTTCTTGTTTTAGTTTAG+TGG | - | chr1.1:30269514-30269533 | MS.gene061628:intron | 25.0% |
| !!! | ATTAGACTAGCTCTATATAA+GGG | - | chr1.1:30273064-30273083 | MS.gene061628:intron | 25.0% |
| !!! | ATTTTGTTATTGATCAAGGT+TGG | - | chr1.1:30268550-30268569 | MS.gene061628:intron | 25.0% |
| !!! | CATTGGTTTTGATGTTTTTT+TGG | + | chr1.1:30269593-30269612 | None:intergenic | 25.0% |
| !!! | TTTAGGGTTTTAGATACTAA+AGG | - | chr1.1:30270673-30270692 | MS.gene061628:intron | 25.0% |
| !!! | TTTTAGTTTCCACTATATGA+TGG | - | chr1.1:30271481-30271500 | MS.gene061628:intron | 25.0% |
| !!! | TTTTGCTTTGGAAAATTACA+AGG | - | chr1.1:30271903-30271922 | MS.gene061628:intron | 25.0% |
| !!! | TTTTGTTATTGATCAAGGTT+GGG | - | chr1.1:30268551-30268570 | MS.gene061628:intron | 25.0% |
| AAAAAACTTGTGAAAACCAG+TGG | + | chr1.1:30269248-30269267 | None:intergenic | 30.0% | |
| AAATGACATCAATTGCTTTC+AGG | + | chr1.1:30273834-30273853 | None:intergenic | 30.0% | |
| AATTGGGTAACAGATATAAG+GGG | + | chr1.1:30273617-30273636 | None:intergenic | 30.0% | |
| ACTTGAGGAAAAATCAAACT+TGG | + | chr1.1:30273539-30273558 | None:intergenic | 30.0% | |
| ATAAGCATACAGTAACCAAT+TGG | + | chr1.1:30271672-30271691 | None:intergenic | 30.0% | |
| ATGAAGAGTTAGGTCAATTT+CGG | - | chr1.1:30272088-30272107 | MS.gene061628:intron | 30.0% | |
| ATTCCATAACTAGAATACAG+GGG | + | chr1.1:30271802-30271821 | None:intergenic | 30.0% | |
| CAATGTACGACTAAAATGTT+TGG | - | chr1.1:30269899-30269918 | MS.gene061628:intron | 30.0% | |
| CAATTCCATAACTAGAATAC+AGG | + | chr1.1:30271804-30271823 | None:intergenic | 30.0% | |
| CTAAATTGACATATAGGTTC+TGG | - | chr1.1:30272359-30272378 | MS.gene061628:intron | 30.0% | |
| CTTACTGGAAAATACAAGAA+AGG | - | chr1.1:30271859-30271878 | MS.gene061628:intron | 30.0% | |
| CTTCACTAAATCTCATTATC+CGG | - | chr1.1:30271641-30271660 | MS.gene061628:intron | 30.0% | |
| GAAACAATTGTAAACACCTT+GGG | - | chr1.1:30270933-30270952 | MS.gene061628:intron | 30.0% | |
| GAATTGGGTAACAGATATAA+GGG | + | chr1.1:30273618-30273637 | None:intergenic | 30.0% | |
| GATAGAAGATGGAATGATTT+GGG | - | chr1.1:30272062-30272081 | MS.gene061628:intron | 30.0% | |
| GATAGAGATCATAATATGTG+AGG | - | chr1.1:30272187-30272206 | MS.gene061628:intron | 30.0% | |
| GATTCTATTGACATGTTTAG+TGG | - | chr1.1:30270004-30270023 | MS.gene061628:intron | 30.0% | |
| GCAATCAATCATTACAGTTA+CGG | + | chr1.1:30272336-30272355 | None:intergenic | 30.0% | |
| GCACTTAAACCAACATATAT+CGG | + | chr1.1:30273517-30273536 | None:intergenic | 30.0% | |
| GTACCAATTTATCATCCATA+AGG | + | chr1.1:30268997-30269016 | None:intergenic | 30.0% | |
| GTCAGAAGGTTAAAACAAAT+AGG | + | chr1.1:30271537-30271556 | None:intergenic | 30.0% | |
| GTTATTGCTTGTGGTTAATT+TGG | - | chr1.1:30271258-30271277 | MS.gene061628:intron | 30.0% | |
| TAAAAAGGAACGATTGTTGA+GGG | - | chr1.1:30270206-30270225 | MS.gene061628:intron | 30.0% | |
| TAGAGATCATAATATGTGAG+GGG | - | chr1.1:30272189-30272208 | MS.gene061628:intron | 30.0% | |
| TGAATTGGGTAACAGATATA+AGG | + | chr1.1:30273619-30273638 | None:intergenic | 30.0% | |
| TGATAGAAGATGGAATGATT+TGG | - | chr1.1:30272061-30272080 | MS.gene061628:intron | 30.0% | |
| TGCCTTCTAAATTGACATAT+AGG | - | chr1.1:30272353-30272372 | MS.gene061628:intron | 30.0% | |
| TGGAAAAGAAGCTGATAATT+TGG | - | chr1.1:30271562-30271581 | MS.gene061628:intron | 30.0% | |
| TGTTGAGGGTAAAATTGTAT+AGG | - | chr1.1:30270220-30270239 | MS.gene061628:intron | 30.0% | |
| TTAAAAAGGAACGATTGTTG+AGG | - | chr1.1:30270205-30270224 | MS.gene061628:intron | 30.0% | |
| TTATCCATACCATCATATAG+TGG | + | chr1.1:30271493-30271512 | None:intergenic | 30.0% | |
| TTCCCTTATGGATGATAAAT+TGG | - | chr1.1:30268991-30269010 | MS.gene061628:intron | 30.0% | |
| TTCTTATATATATGACCGGA+GGG | - | chr1.1:30269809-30269828 | MS.gene061628:intron | 30.0% | |
| TTGTAAGAACTCATTGATAG+TGG | - | chr1.1:30271072-30271091 | MS.gene061628:intron | 30.0% | |
| TTTATTCTTTGGTCTAACCT+TGG | + | chr1.1:30273654-30273673 | None:intergenic | 30.0% | |
| TTTCTTATATATATGACCGG+AGG | - | chr1.1:30269808-30269827 | MS.gene061628:intron | 30.0% | |
| TTTGATATGTTGTGTACTGT+TGG | - | chr1.1:30269095-30269114 | MS.gene061628:intron | 30.0% | |
| ! | ACTGAAAGTACAACCAATTA+TGG | - | chr1.1:30273185-30273204 | MS.gene061628:intron | 30.0% |
| ! | AGTGACGTTTTCGTTATTAA+AGG | - | chr1.1:30273004-30273023 | MS.gene061628:intron | 30.0% |
| ! | ATTTGGGTTTATGAAGAGTT+AGG | - | chr1.1:30272078-30272097 | MS.gene061628:intron | 30.0% |
| ! | CGGATAAGATTTGTGTATTT+TGG | - | chr1.1:30270514-30270533 | MS.gene061628:intron | 30.0% |
| ! | CTGTATTCTAGTTATGGAAT+TGG | - | chr1.1:30271802-30271821 | MS.gene061628:intron | 30.0% |
| ! | CTTTCTTGTATTTTCCAGTA+AGG | + | chr1.1:30271861-30271880 | None:intergenic | 30.0% |
| ! | TACGGTTAGTGTTAATTTGA+TGG | - | chr1.1:30269186-30269205 | MS.gene061628:intron | 30.0% |
| ! | TAGATTGTTGTTATTGCTTG+TGG | - | chr1.1:30271249-30271268 | MS.gene061628:intron | 30.0% |
| ! | TCACTAAGAATCTTCTCTTT+TGG | + | chr1.1:30270864-30270883 | None:intergenic | 30.0% |
| ! | TGAAAAGTTTTCATGCCATT+AGG | + | chr1.1:30272865-30272884 | None:intergenic | 30.0% |
| ! | TTCATTAGTGTCTTGTTCAT+TGG | - | chr1.1:30270966-30270985 | MS.gene061628:intron | 30.0% |
| ! | TTCTTCACTGTTTCTTATGA+TGG | - | chr1.1:30271981-30272000 | MS.gene061628:intron | 30.0% |
| ! | TTTTAACCTTCTGACTATGA+TGG | - | chr1.1:30271542-30271561 | MS.gene061628:intron | 30.0% |
| !! | ACTATTTTGGATCGTTAACT+AGG | - | chr1.1:30272165-30272184 | MS.gene061628:intron | 30.0% |
| !! | ATGACTCAAAATTTGGTGTT+TGG | - | chr1.1:30270376-30270395 | MS.gene061628:CDS | 30.0% |
| !! | ATTTGGTGTTTGGAAAATGT+TGG | - | chr1.1:30270386-30270405 | MS.gene061628:CDS | 30.0% |
| !! | GAGTACTTTTTGTTGGAAAT+TGG | - | chr1.1:30269831-30269850 | MS.gene061628:intron | 30.0% |
| !! | GTTTTAGATACTAAAGGTTG+AGG | - | chr1.1:30270679-30270698 | MS.gene061628:intron | 30.0% |
| !! | TGGTTTTTGTTTCGATTTTC+TGG | - | chr1.1:30272932-30272951 | MS.gene061628:intron | 30.0% |
| !!! | AATGTATTTTTTACTCCCTC+CGG | - | chr1.1:30269546-30269565 | MS.gene061628:CDS | 30.0% |
| !!! | ATTTTGGCTGAAACAATCAT+TGG | + | chr1.1:30271616-30271635 | None:intergenic | 30.0% |
| !!! | CATTTTTTGACCCATTTGTT+GGG | - | chr1.1:30270611-30270630 | MS.gene061628:intron | 30.0% |
| !!! | TCTTGTTTTAGTTTAGTGGT+TGG | - | chr1.1:30269518-30269537 | MS.gene061628:intron | 30.0% |
| AAAGATGCAAATAGACTGTG+AGG | - | chr1.1:30273122-30273141 | MS.gene061628:intron | 35.0% | |
| AACTGACGAAACATTAGGAT+TGG | + | chr1.1:30272601-30272620 | None:intergenic | 35.0% | |
| AAGCTTCAAGATGTGAATCT+TGG | - | chr1.1:30270720-30270739 | MS.gene061628:intron | 35.0% | |
| AATCTTGGAGAACCAAAAGA+GGG | - | chr1.1:30270735-30270754 | MS.gene061628:intron | 35.0% | |
| AATGGGTCATCATCCATAAT+TGG | + | chr1.1:30273201-30273220 | None:intergenic | 35.0% | |
| AATGTTTCGTCAGTTATCTG+TGG | - | chr1.1:30272606-30272625 | MS.gene061628:intron | 35.0% | |
| ACACACACACACACAAATAA+GGG | + | chr1.1:30273779-30273798 | None:intergenic | 35.0% | |
| AGAAACAGTGAAGAAAGACA+CGG | + | chr1.1:30271976-30271995 | None:intergenic | 35.0% | |
| ATCATCCATAAGGGAAAAAG+TGG | + | chr1.1:30268987-30269006 | None:intergenic | 35.0% | |
| ATCTTTATCAGAGAACCTGT+TGG | - | chr1.1:30270321-30270340 | MS.gene061628:CDS | 35.0% | |
| ATTGGGTAACAGATATAAGG+GGG | + | chr1.1:30273616-30273635 | None:intergenic | 35.0% | |
| ATTGGTGAGATTGGGAAAAT+GGG | - | chr1.1:30270984-30271003 | MS.gene061628:intron | 35.0% | |
| CAAACATGAGACTTTACTTG+AGG | + | chr1.1:30273554-30273573 | None:intergenic | 35.0% | |
| CAGATAACTGACGAAACATT+AGG | + | chr1.1:30272606-30272625 | None:intergenic | 35.0% | |
| CGGATAATGAGATTTAGTGA+AGG | + | chr1.1:30271643-30271662 | None:intergenic | 35.0% | |
| CTAATTAGCGTTTATCGAGT+TGG | - | chr1.1:30272214-30272233 | MS.gene061628:intron | 35.0% | |
| CTAGACAAAAAAGTTTGAGG+TGG | + | chr1.1:30269215-30269234 | None:intergenic | 35.0% | |
| GAGCTAGACAAAAAAGTTTG+AGG | + | chr1.1:30269218-30269237 | None:intergenic | 35.0% | |
| GATTAATCAACACTAAACGG+CGG | + | chr1.1:30270304-30270323 | None:intergenic | 35.0% | |
| GCTTGCGTATGCAAAAATAT+CGG | + | chr1.1:30271373-30271392 | None:intergenic | 35.0% | |
| GGAAACAATTGTAAACACCT+TGG | - | chr1.1:30270932-30270951 | MS.gene061628:intron | 35.0% | |
| GGGAAAATGGGTAGAAATTA+GGG | - | chr1.1:30270996-30271015 | MS.gene061628:intron | 35.0% | |
| GTTCTCCTAGATTTAAGCAT+AGG | + | chr1.1:30273812-30273831 | None:intergenic | 35.0% | |
| GTTTCCACTATATGATGGTA+TGG | - | chr1.1:30271486-30271505 | MS.gene061628:intron | 35.0% | |
| TAAGCGTGGAGATTAGATTT+CGG | - | chr1.1:30270065-30270084 | MS.gene061628:intron | 35.0% | |
| TATGGATGATGACCCATTTA+AGG | - | chr1.1:30273203-30273222 | MS.gene061628:intron | 35.0% | |
| TATTGACAATGCTTCTTCGA+AGG | + | chr1.1:30273463-30273482 | None:intergenic | 35.0% | |
| TCTTGTTCATTGGTGAGATT+GGG | - | chr1.1:30270976-30270995 | MS.gene061628:intron | 35.0% | |
| TCTTTATCAGAGAACCTGTT+GGG | - | chr1.1:30270322-30270341 | MS.gene061628:CDS | 35.0% | |
| TGAAATCAAAGGCTAAGTGT+TGG | - | chr1.1:30270881-30270900 | MS.gene061628:intron | 35.0% | |
| TGACATGTTTAGTGGTTAGT+GGG | - | chr1.1:30270012-30270031 | MS.gene061628:intron | 35.0% | |
| TGGATGTTGTGTATTGTCAT+AGG | - | chr1.1:30268484-30268503 | MS.gene061628:intron | 35.0% | |
| TGGGAAAATGGGTAGAAATT+AGG | - | chr1.1:30270995-30271014 | MS.gene061628:intron | 35.0% | |
| TGGGCAATGTATATGACTAT+TGG | - | chr1.1:30270031-30270050 | MS.gene061628:intron | 35.0% | |
| TGTTGTAGAATCTTGCATCT+CGG | - | chr1.1:30272475-30272494 | MS.gene061628:intron | 35.0% | |
| TGTTTCGACAAAGATCTTCT+GGG | - | chr1.1:30268371-30268390 | MS.gene061628:intron | 35.0% | |
| TTCCACATGTAACAGAAAGT+TGG | + | chr1.1:30272828-30272847 | None:intergenic | 35.0% | |
| TTCTTATATTAAGGACCGGA+GGG | + | chr1.1:30269564-30269583 | None:intergenic | 35.0% | |
| TTGACATGTTTAGTGGTTAG+TGG | - | chr1.1:30270011-30270030 | MS.gene061628:intron | 35.0% | |
| TTGAGGGATGACTCAAAATT+TGG | - | chr1.1:30270369-30270388 | MS.gene061628:CDS | 35.0% | |
| TTGGATAAATCCATTGTTGG+TGG | - | chr1.1:30271440-30271459 | MS.gene061628:intron | 35.0% | |
| TTGTTTCGACAAAGATCTTC+TGG | - | chr1.1:30268370-30268389 | MS.gene061628:intron | 35.0% | |
| ! | AAGCATTGTCAATAGCTCAA+CGG | - | chr1.1:30273469-30273488 | MS.gene061628:intron | 35.0% |
| ! | AATGAATTTTCACTCTCCCA+AGG | + | chr1.1:30270952-30270971 | None:intergenic | 35.0% |
| ! | AGTTTGAGACATGAGACTTT+GGG | - | chr1.1:30269964-30269983 | MS.gene061628:intron | 35.0% |
| ! | ATCAAGGTTGGGCTTTTTAT+TGG | - | chr1.1:30268562-30268581 | MS.gene061628:intron | 35.0% |
| ! | CAACAATGGATTTATCCAAG+CGG | + | chr1.1:30271439-30271458 | None:intergenic | 35.0% |
| ! | CGTATGCAAAAATATCGGTT+GGG | + | chr1.1:30271368-30271387 | None:intergenic | 35.0% |
| ! | CTTGTGGTTAATTTGGTTGT+TGG | - | chr1.1:30271265-30271284 | MS.gene061628:intron | 35.0% |
| ! | GAAGCTGATAATTTGGAGTT+CGG | - | chr1.1:30271569-30271588 | MS.gene061628:intron | 35.0% |
| ! | GGGTAGAAATGGAATTGTTT+TGG | - | chr1.1:30272399-30272418 | MS.gene061628:intron | 35.0% |
| ! | GGTTAGTGTTAATTTGATGG+CGG | - | chr1.1:30269189-30269208 | MS.gene061628:intron | 35.0% |
| ! | TATGAGAGCATGATAGAAGA+TGG | - | chr1.1:30272051-30272070 | MS.gene061628:intron | 35.0% |
| ! | TCAAGGTTGGGCTTTTTATT+GGG | - | chr1.1:30268563-30268582 | MS.gene061628:intron | 35.0% |
| ! | TCTTTTCCATCATAGTCAGA+AGG | + | chr1.1:30271551-30271570 | None:intergenic | 35.0% |
| ! | TGTTGCTAATAGGTTGGATT+TGG | - | chr1.1:30268629-30268648 | MS.gene061628:intron | 35.0% |
| ! | TTGGAATCGTGACACAATTT+TGG | - | chr1.1:30270405-30270424 | MS.gene061628:intron | 35.0% |
| !! | AGAACTCATTGATAGTGGAT+TGG | - | chr1.1:30271077-30271096 | MS.gene061628:intron | 35.0% |
| !! | CATCATAGTTTCAAGTTGGT+TGG | + | chr1.1:30269069-30269088 | None:intergenic | 35.0% |
| !!! | AAAAGCCACTTTTTCCCTTA+TGG | - | chr1.1:30268979-30268998 | MS.gene061628:intron | 35.0% |
| !!! | GCATTTTTTGACCCATTTGT+TGG | - | chr1.1:30270610-30270629 | MS.gene061628:intron | 35.0% |
| AAAGTCAGCCAACTTTCCTA+CGG | - | chr1.1:30268171-30268190 | MS.gene061628:CDS | 40.0% | |
| AAGCAATCAAAAGCCTTGAC+TGG | - | chr1.1:30268331-30268350 | MS.gene061628:intron | 40.0% | |
| AAGCCAATAGCAGATGAACT+GGG | - | chr1.1:30272537-30272556 | MS.gene061628:intron | 40.0% | |
| AATCTCATGGAAACCAAAGG+AGG | - | chr1.1:30270645-30270664 | MS.gene061628:intron | 40.0% | |
| ACCAAGCTTACCCAACAAAT+GGG | + | chr1.1:30270624-30270643 | None:intergenic | 40.0% | |
| ACTAAAGGTTGAGGGTCTTT+GGG | - | chr1.1:30270688-30270707 | MS.gene061628:intron | 40.0% | |
| AGAAACAAGCCAATCCAAAC+GGG | + | chr1.1:30268791-30268810 | None:intergenic | 40.0% | |
| AGGAATGTGGTAGAGAAGAA+AGG | + | chr1.1:30273385-30273404 | None:intergenic | 40.0% | |
| AGTGTGTAAATGTGTGTTGC+AGG | - | chr1.1:30271759-30271778 | MS.gene061628:intron | 40.0% | |
| AGTTGGTTGGCAGTGTTAAT+AGG | + | chr1.1:30269056-30269075 | None:intergenic | 40.0% | |
| ATAGGAAGGACATCCTACAA+TGG | + | chr1.1:30269038-30269057 | None:intergenic | 40.0% | |
| ATCCCTTAAGCAAGTGATCA+GGG | + | chr1.1:30271410-30271429 | None:intergenic | 40.0% | |
| ATCTCATGGAAACCAAAGGA+GGG | - | chr1.1:30270646-30270665 | MS.gene061628:intron | 40.0% | |
| ATCTTGGAGAACCAAAAGAG+GGG | - | chr1.1:30270736-30270755 | MS.gene061628:intron | 40.0% | |
| ATGGATTTATCCAAGCGGTA+AGG | + | chr1.1:30271434-30271453 | None:intergenic | 40.0% | |
| ATGGTAAAGTGCATTGTTGC+AGG | + | chr1.1:30273744-30273763 | None:intergenic | 40.0% | |
| ATTCACCTCAGATTATGCCA+AGG | - | chr1.1:30273634-30273653 | MS.gene061628:CDS | 40.0% | |
| ATTCGAGCAAAATCGTGTCA+CGG | + | chr1.1:30270575-30270594 | None:intergenic | 40.0% | |
| ATTCGTGGAGCAAGTATCAA+TGG | + | chr1.1:30271294-30271313 | None:intergenic | 40.0% | |
| CAAGAAATACTTGTAGCAGC+TGG | - | chr1.1:30272759-30272778 | MS.gene061628:intron | 40.0% | |
| CAAGAAATGTTCACCCAGTT+CGG | + | chr1.1:30271140-30271159 | None:intergenic | 40.0% | |
| CACACACACACACAAATAAG+GGG | + | chr1.1:30273778-30273797 | None:intergenic | 40.0% | |
| CACACACACACACACAAATA+AGG | + | chr1.1:30273780-30273799 | None:intergenic | 40.0% | |
| CAGAAACAAGCCAATCCAAA+CGG | + | chr1.1:30268792-30268811 | None:intergenic | 40.0% | |
| CATTGGTGAGATTGGGAAAA+TGG | - | chr1.1:30270983-30271002 | MS.gene061628:intron | 40.0% | |
| CGCTTGGATAAATCCATTGT+TGG | - | chr1.1:30271437-30271456 | MS.gene061628:intron | 40.0% | |
| CTCCAACTTTCTGTTACATG+TGG | - | chr1.1:30272823-30272842 | MS.gene061628:intron | 40.0% | |
| CTGAGTATAACCTCTTGAAC+AGG | - | chr1.1:30268673-30268692 | MS.gene061628:intron | 40.0% | |
| CTGTTCAAGAGGTTATACTC+AGG | + | chr1.1:30268675-30268694 | None:intergenic | 40.0% | |
| CTTCTTATATTAAGGACCGG+AGG | + | chr1.1:30269565-30269584 | None:intergenic | 40.0% | |
| GAATCTTGGAGAACCAAAAG+AGG | - | chr1.1:30270734-30270753 | MS.gene061628:intron | 40.0% | |
| GAGTACTAGAGAGAGAGAAA+GGG | - | chr1.1:30273290-30273309 | MS.gene061628:intron | 40.0% | |
| GATGTGCTCAAAAAGGTTGA+TGG | - | chr1.1:30272510-30272529 | MS.gene061628:intron | 40.0% | |
| GCAATTGAAAGCTGTGCTAA+TGG | + | chr1.1:30272567-30272586 | None:intergenic | 40.0% | |
| GCGTATGCAAAAATATCGGT+TGG | + | chr1.1:30271369-30271388 | None:intergenic | 40.0% | |
| GGGATTGAACCGATATATGT+TGG | - | chr1.1:30273505-30273524 | MS.gene061628:CDS | 40.0% | |
| GTGAATCTCATGGAAACCAA+AGG | - | chr1.1:30270642-30270661 | MS.gene061628:intron | 40.0% | |
| GTTTCGACAAAGATCTTCTG+GGG | - | chr1.1:30268372-30268391 | MS.gene061628:intron | 40.0% | |
| TAACAGGTTACGTTCAATCC+AGG | + | chr1.1:30273424-30273443 | None:intergenic | 40.0% | |
| TACAACACACGAGGAAAAGT+GGG | + | chr1.1:30272462-30272481 | None:intergenic | 40.0% | |
| TACTAAAGGTTGAGGGTCTT+TGG | - | chr1.1:30270687-30270706 | MS.gene061628:intron | 40.0% | |
| TATAAGGGGGCAAAACTATC+TGG | + | chr1.1:30273603-30273622 | None:intergenic | 40.0% | |
| TCAAAAGCCTTGACTGGAAA+CGG | - | chr1.1:30268337-30268356 | MS.gene061628:intron | 40.0% | |
| TCAACGGTCGTACTATTGAA+GGG | - | chr1.1:30273485-30273504 | MS.gene061628:CDS | 40.0% | |
| TCAGCAGATTACTGAAGCTT+GGG | - | chr1.1:30268605-30268624 | MS.gene061628:intron | 40.0% | |
| TCTAACCTTGGCATAATCTG+AGG | + | chr1.1:30273642-30273661 | None:intergenic | 40.0% | |
| TGAGTACTAGAGAGAGAGAA+AGG | - | chr1.1:30273289-30273308 | MS.gene061628:intron | 40.0% | |
| TGATGCTCAGATTCTGTGTA+CGG | - | chr1.1:30269168-30269187 | MS.gene061628:intron | 40.0% | |
| TGCAATACAACAACTTAGGC+CGG | - | chr1.1:30268139-30268158 | MS.gene061628:CDS | 40.0% | |
| TGGATTGAACGTAACCTGTT+AGG | - | chr1.1:30273423-30273442 | MS.gene061628:intron | 40.0% | |
| TGGATTTATCCAAGCGGTAA+GGG | + | chr1.1:30271433-30271452 | None:intergenic | 40.0% | |
| TGTTGTGTATTGTCATAGGC+CGG | - | chr1.1:30268488-30268507 | MS.gene061628:intron | 40.0% | |
| TTCTACCCATCATACAGCAA+TGG | + | chr1.1:30272387-30272406 | None:intergenic | 40.0% | |
| TTTCGGCTAGAAGAGTTTAG+TGG | - | chr1.1:30270082-30270101 | MS.gene061628:intron | 40.0% | |
| TTTGAGTCATCCCTCAACAA+GGG | + | chr1.1:30270366-30270385 | None:intergenic | 40.0% | |
| TTTGCAGCATCTTCCATTGT+AGG | - | chr1.1:30269022-30269041 | MS.gene061628:intron | 40.0% | |
| ! | AACCAAAGGAGGGAACTTTT+AGG | - | chr1.1:30270656-30270675 | MS.gene061628:intron | 40.0% |
| ! | AAGGAATCGTGACACGATTT+TGG | - | chr1.1:30270546-30270565 | MS.gene061628:intron | 40.0% |
| ! | AAGGTTGGGCTTTTTATTGG+GGG | - | chr1.1:30268565-30268584 | MS.gene061628:intron | 40.0% |
| ! | ACCAAAGGAGGGAACTTTTA+GGG | - | chr1.1:30270657-30270676 | MS.gene061628:intron | 40.0% |
| ! | AGAGTCTTTTGTGAGCAACT+TGG | - | chr1.1:30270823-30270842 | MS.gene061628:intron | 40.0% |
| ! | ATGCAAAAATATCGGTTGGG+AGG | + | chr1.1:30271365-30271384 | None:intergenic | 40.0% |
| ! | CAAGGAAGCATATTGTGGAA+GGG | - | chr1.1:30268424-30268443 | MS.gene061628:intron | 40.0% |
| ! | CAAGGTTGGGCTTTTTATTG+GGG | - | chr1.1:30268564-30268583 | MS.gene061628:intron | 40.0% |
| ! | CTGAGAATTAGGGGACTTTT+TGG | - | chr1.1:30272912-30272931 | MS.gene061628:intron | 40.0% |
| ! | CTTCCCCTGTATTCTAGTTA+TGG | - | chr1.1:30271796-30271815 | MS.gene061628:intron | 40.0% |
| ! | GAGTCTTTTGTGAGCAACTT+GGG | - | chr1.1:30270824-30270843 | MS.gene061628:intron | 40.0% |
| ! | GAGTTTGAGACATGAGACTT+TGG | - | chr1.1:30269963-30269982 | MS.gene061628:intron | 40.0% |
| ! | GCTAATAGGTTGGATTTGGT+TGG | - | chr1.1:30268633-30268652 | MS.gene061628:intron | 40.0% |
| ! | GGCATAATCTGAGGTGAATT+GGG | + | chr1.1:30273633-30273652 | None:intergenic | 40.0% |
| ! | GTCTTGTTCATTGGTGAGAT+TGG | - | chr1.1:30270975-30270994 | MS.gene061628:intron | 40.0% |
| ! | TCAAGGAAGCATATTGTGGA+AGG | - | chr1.1:30268423-30268442 | MS.gene061628:intron | 40.0% |
| ! | TGCAAAAATATCGGTTGGGA+GGG | + | chr1.1:30271364-30271383 | None:intergenic | 40.0% |
| ! | TGGCATAATCTGAGGTGAAT+TGG | + | chr1.1:30273634-30273653 | None:intergenic | 40.0% |
| ! | TGGGCATCATAGTTTCAAGT+TGG | + | chr1.1:30269073-30269092 | None:intergenic | 40.0% |
| !! | CTCTATAGTTGACTTGCATG+TGG | + | chr1.1:30269864-30269883 | None:intergenic | 40.0% |
| !! | GGTTGATGATGTGCTCAAAA+AGG | - | chr1.1:30272503-30272522 | MS.gene061628:intron | 40.0% |
| !! | GTGACACAATTTTGGTATCG+TGG | - | chr1.1:30270413-30270432 | MS.gene061628:intron | 40.0% |
| !! | TATAGTTGACTTGCATGTGG+AGG | + | chr1.1:30269861-30269880 | None:intergenic | 40.0% |
| !! | TGCTGTATGATGGGTAGAAA+TGG | - | chr1.1:30272388-30272407 | MS.gene061628:intron | 40.0% |
| !! | TTAGTCGTACATTGACTCGA+GGG | + | chr1.1:30269893-30269912 | None:intergenic | 40.0% |
| !! | TTGTGGTTTTGCTATGCACT+TGG | - | chr1.1:30271211-30271230 | MS.gene061628:intron | 40.0% |
| !! | TTTAGTCGTACATTGACTCG+AGG | + | chr1.1:30269894-30269913 | None:intergenic | 40.0% |
| !! | TTTGGATTGGCTTGTTTCTG+AGG | - | chr1.1:30268792-30268811 | MS.gene061628:intron | 40.0% |
| !! | TTTTGAGTCATCCCTCAACA+AGG | + | chr1.1:30270367-30270386 | None:intergenic | 40.0% |
| AACCAAAAGAGGGGGTTCTT+GGG | - | chr1.1:30270745-30270764 | MS.gene061628:intron | 45.0% | |
| AACCCCTGATCACTTGCTTA+AGG | - | chr1.1:30271404-30271423 | MS.gene061628:intron | 45.0% | |
| AAGCTTGGGCTGTTGCTAAT+AGG | - | chr1.1:30268619-30268638 | MS.gene061628:intron | 45.0% | |
| ACCCCTGATCACTTGCTTAA+GGG | - | chr1.1:30271405-30271424 | MS.gene061628:intron | 45.0% | |
| ACCCTAAAAGTTCCCTCCTT+TGG | + | chr1.1:30270661-30270680 | None:intergenic | 45.0% | |
| ACTACTAACTCCTGCTGTGA+TGG | - | chr1.1:30273970-30273989 | MS.gene061628:CDS | 45.0% | |
| AGCCAAATCGTGACACGATT+TGG | - | chr1.1:30270472-30270491 | MS.gene061628:intron | 45.0% | |
| ATCAATCTCTCCCCCATAGT+AGG | - | chr1.1:30271104-30271123 | MS.gene061628:intron | 45.0% | |
| ATCCAGGAACTCAAGAACCA+CGG | + | chr1.1:30273408-30273427 | None:intergenic | 45.0% | |
| ATTGAACCAGGTGACCTAAC+AGG | + | chr1.1:30273440-30273459 | None:intergenic | 45.0% | |
| CACCAAGCTTACCCAACAAA+TGG | + | chr1.1:30270625-30270644 | None:intergenic | 45.0% | |
| CATTATCCGGTTGAGCCAAT+TGG | - | chr1.1:30271654-30271673 | MS.gene061628:intron | 45.0% | |
| CGAACTGGGTGAACATTTCT+TGG | - | chr1.1:30271138-30271157 | MS.gene061628:intron | 45.0% | |
| CTACAACACACGAGGAAAAG+TGG | + | chr1.1:30272463-30272482 | None:intergenic | 45.0% | |
| CTCAACGGTCGTACTATTGA+AGG | - | chr1.1:30273484-30273503 | MS.gene061628:intron | 45.0% | |
| CTTCTTCGAAGGATTGAACC+AGG | + | chr1.1:30273452-30273471 | None:intergenic | 45.0% | |
| CTTGACAGCCCCTTATCATT+GGG | + | chr1.1:30268408-30268427 | None:intergenic | 45.0% | |
| GAAGCCAATAGCAGATGAAC+TGG | - | chr1.1:30272536-30272555 | MS.gene061628:intron | 45.0% | |
| GATCCCTTAAGCAAGTGATC+AGG | + | chr1.1:30271411-30271430 | None:intergenic | 45.0% | |
| GCAAGATTCTACAACACACG+AGG | + | chr1.1:30272471-30272490 | None:intergenic | 45.0% | |
| GCAGAAGGAATTACTGGGTA+TGG | + | chr1.1:30273334-30273353 | None:intergenic | 45.0% | |
| GCCAAATCGTGACACGATTT+GGG | - | chr1.1:30270473-30270492 | MS.gene061628:intron | 45.0% | |
| GGCTAGAAGAGTTTAGTGGT+TGG | - | chr1.1:30270086-30270105 | MS.gene061628:intron | 45.0% | |
| GGCTGGAGGTAAGTAAAGTT+TGG | - | chr1.1:30271590-30271609 | MS.gene061628:intron | 45.0% | |
| GGTCCAACTTGACCTACTAT+GGG | + | chr1.1:30271119-30271138 | None:intergenic | 45.0% | |
| GGTTGGCAGTGTTAATAGGA+AGG | + | chr1.1:30269052-30269071 | None:intergenic | 45.0% | |
| GTCAGCAGATTACTGAAGCT+TGG | - | chr1.1:30268604-30268623 | MS.gene061628:intron | 45.0% | |
| GTCCAACTTGACCTACTATG+GGG | + | chr1.1:30271118-30271137 | None:intergenic | 45.0% | |
| GTTGATATAAGGACGGCAGA+AGG | + | chr1.1:30273349-30273368 | None:intergenic | 45.0% | |
| TAACCTCTTGAACAGGCACA+AGG | - | chr1.1:30268680-30268699 | MS.gene061628:intron | 45.0% | |
| TAATCAACACTAAACGGCGG+TGG | + | chr1.1:30270301-30270320 | None:intergenic | 45.0% | |
| TACGGAGCATGGGTAAGTTT+CGG | - | chr1.1:30268189-30268208 | MS.gene061628:CDS | 45.0% | |
| TACTCAGGCTGTTCAACAAC+CGG | + | chr1.1:30268660-30268679 | None:intergenic | 45.0% | |
| TAGCACAGCTTTCAATTGCG+TGG | - | chr1.1:30272568-30272587 | MS.gene061628:intron | 45.0% | |
| TCAATCTTCTCCATCACAGC+AGG | + | chr1.1:30273983-30274002 | None:intergenic | 45.0% | |
| TCCAACTTGACCTACTATGG+GGG | + | chr1.1:30271117-30271136 | None:intergenic | 45.0% | |
| TCCCAAATCGTGTCACGATT+TGG | + | chr1.1:30270477-30270496 | None:intergenic | 45.0% | |
| TCCCTTAAGCAAGTGATCAG+GGG | + | chr1.1:30271409-30271428 | None:intergenic | 45.0% | |
| TCTTGGAGAACCAAAAGAGG+GGG | - | chr1.1:30270737-30270756 | MS.gene061628:intron | 45.0% | |
| TGGCACCATTGCTGTATGAT+GGG | - | chr1.1:30272379-30272398 | MS.gene061628:intron | 45.0% | |
| TGGTGTGCAATGTATAAGCG+TGG | - | chr1.1:30270051-30270070 | MS.gene061628:intron | 45.0% | |
| TTACCTTGTGCCTGTTCAAG+AGG | + | chr1.1:30268686-30268705 | None:intergenic | 45.0% | |
| TTCCAGAACACACCCATTCA+CGG | + | chr1.1:30270453-30270472 | None:intergenic | 45.0% | |
| TTGAGTCATCCCTCAACAAG+GGG | + | chr1.1:30270365-30270384 | None:intergenic | 45.0% | |
| TTGCTTCTTTAACGTCGAGC+TGG | + | chr1.1:30268218-30268237 | None:intergenic | 45.0% | |
| TTGGGCTGTTGCTAATAGGT+TGG | - | chr1.1:30268623-30268642 | MS.gene061628:intron | 45.0% | |
| ! | ACCCATTTGTTGGGTAAGCT+TGG | - | chr1.1:30270620-30270639 | MS.gene061628:intron | 45.0% |
| ! | ATAATTTGGAGTTCGGCTGG+AGG | - | chr1.1:30271576-30271595 | MS.gene061628:intron | 45.0% |
| ! | ATGGAATTGGTCTCACCACT+TGG | - | chr1.1:30271815-30271834 | MS.gene061628:intron | 45.0% |
| ! | CAGTAACCAATTGGCTCAAC+CGG | + | chr1.1:30271663-30271682 | None:intergenic | 45.0% |
| ! | CTGATAATTTGGAGTTCGGC+TGG | - | chr1.1:30271573-30271592 | MS.gene061628:intron | 45.0% |
| ! | GATTTAGGACCCGTTTGGAT+TGG | - | chr1.1:30268779-30268798 | MS.gene061628:intron | 45.0% |
| ! | GCAAAAATATCGGTTGGGAG+GGG | + | chr1.1:30271363-30271382 | None:intergenic | 45.0% |
| ! | GCTGTCAAGGAAGCATATTG+TGG | - | chr1.1:30268419-30268438 | MS.gene061628:intron | 45.0% |
| ! | GGTAAGCTTGGTGAATCTCA+TGG | - | chr1.1:30270632-30270651 | MS.gene061628:intron | 45.0% |
| ! | GTATCGTGGCACGATTTTCA+AGG | - | chr1.1:30270427-30270446 | MS.gene061628:intron | 45.0% |
| ! | TAGGTTGGATTTGGTTGGAC+CGG | - | chr1.1:30268638-30268657 | MS.gene061628:intron | 45.0% |
| ! | TGACACGATTTGGGAAAACG+TGG | - | chr1.1:30270482-30270501 | MS.gene061628:intron | 45.0% |
| ! | TGCTGTGATGGAGAAGATTG+AGG | - | chr1.1:30273982-30274001 | MS.gene061628:CDS | 45.0% |
| ! | TGTTGGATTTAGGACCCGTT+TGG | - | chr1.1:30268774-30268793 | MS.gene061628:intron | 45.0% |
| ! | TTTATTGGGGGACTAGTGAG+TGG | - | chr1.1:30268577-30268596 | MS.gene061628:intron | 45.0% |
| !! | ACGATTTTCAAGGCCGTGAA+TGG | - | chr1.1:30270437-30270456 | MS.gene061628:intron | 45.0% |
| !! | AGGCTAAGTGTTGGTTCTCT+TGG | - | chr1.1:30270890-30270909 | MS.gene061628:intron | 45.0% |
| !! | CCAACAAAAAGTACTCCCTC+CGG | + | chr1.1:30269827-30269846 | None:intergenic | 45.0% |
| !! | CCTTTTGGGGAAGATTCATG+GGG | - | chr1.1:30270781-30270800 | MS.gene061628:intron | 45.0% |
| !! | CGATTTTCAAGGCCGTGAAT+GGG | - | chr1.1:30270438-30270457 | MS.gene061628:intron | 45.0% |
| !! | CTAAGTGTTGGTTCTCTTGG+GGG | - | chr1.1:30270893-30270912 | MS.gene061628:intron | 45.0% |
| !! | GCATAACTTGCTTGCAAGAG+TGG | - | chr1.1:30273864-30273883 | MS.gene061628:CDS | 45.0% |
| !! | GCCTTTTGGGGAAGATTCAT+GGG | - | chr1.1:30270780-30270799 | MS.gene061628:intron | 45.0% |
| !! | GCTAAGTGTTGGTTCTCTTG+GGG | - | chr1.1:30270892-30270911 | MS.gene061628:intron | 45.0% |
| !! | GGCTAAGTGTTGGTTCTCTT+GGG | - | chr1.1:30270891-30270910 | MS.gene061628:intron | 45.0% |
| !! | GGGGGTTAGATTCTAGAGTT+GGG | - | chr1.1:30270911-30270930 | MS.gene061628:intron | 45.0% |
| !! | TGCCTTTTGGGGAAGATTCA+TGG | - | chr1.1:30270779-30270798 | MS.gene061628:intron | 45.0% |
| !! | TGGGGGTTAGATTCTAGAGT+TGG | - | chr1.1:30270910-30270929 | MS.gene061628:intron | 45.0% |
| !! | TGTATTTTGGGTCGTACGCA+AGG | - | chr1.1:30270527-30270546 | MS.gene061628:intron | 45.0% |
| !!! | AAAAGGGTTGGTGCCTTTTG+GGG | - | chr1.1:30270768-30270787 | MS.gene061628:intron | 45.0% |
| !!! | GAAAAGGGTTGGTGCCTTTT+GGG | - | chr1.1:30270767-30270786 | MS.gene061628:intron | 45.0% |
| !!! | AAAATTTTCAAAAAAAAATT+TGG | + | chr1.1:30269791-30269810 | None:intergenic | 5.0% |
| AAAGCAAAACGGCTGTCTGG+GGG | + | chr1.1:30271892-30271911 | None:intergenic | 50.0% | |
| AACGCAGAAGTCTACGCCAA+CGG | - | chr1.1:30268285-30268304 | MS.gene061628:intron | 50.0% | |
| AAGAGGGGGTTCTTGGGAAA+AGG | - | chr1.1:30270751-30270770 | MS.gene061628:intron | 50.0% | |
| ACGCCCAGTTCATCTGCTAT+TGG | + | chr1.1:30272543-30272562 | None:intergenic | 50.0% | |
| ACGTAACCTGTTAGGTCACC+TGG | - | chr1.1:30273431-30273450 | MS.gene061628:intron | 50.0% | |
| AGAGGGGGTTCTTGGGAAAA+GGG | - | chr1.1:30270752-30270771 | MS.gene061628:intron | 50.0% | |
| AGGACAGGGTCCCAATGATA+AGG | - | chr1.1:30268395-30268414 | MS.gene061628:intron | 50.0% | |
| AGGACGGCAGAAGGAATTAC+TGG | + | chr1.1:30273340-30273359 | None:intergenic | 50.0% | |
| CAAAGCAAAACGGCTGTCTG+GGG | + | chr1.1:30271893-30271912 | None:intergenic | 50.0% | |
| CCAAAGCAAAACGGCTGTCT+GGG | + | chr1.1:30271894-30271913 | None:intergenic | 50.0% | |
| CCAACTTTCCTACGGAGCAT+GGG | - | chr1.1:30268179-30268198 | MS.gene061628:CDS | 50.0% | |
| CCAATGATAAGGGGCTGTCA+AGG | - | chr1.1:30268406-30268425 | MS.gene061628:intron | 50.0% | |
| CCCCATGAATCTTCCCCAAA+AGG | + | chr1.1:30270784-30270803 | None:intergenic | 50.0% | |
| CCTTGACAGCCCCTTATCAT+TGG | + | chr1.1:30268409-30268428 | None:intergenic | 50.0% | |
| CGGTCCAACTTGACCTACTA+TGG | + | chr1.1:30271120-30271139 | None:intergenic | 50.0% | |
| CTGGCACCATTGCTGTATGA+TGG | - | chr1.1:30272378-30272397 | MS.gene061628:intron | 50.0% | |
| CTGTATGAATCAGCGCGCTT+TGG | + | chr1.1:30274025-30274044 | None:intergenic | 50.0% | |
| GAAACTTACCCATGCTCCGT+AGG | + | chr1.1:30268190-30268209 | None:intergenic | 50.0% | |
| GAACCAAAAGAGGGGGTTCT+TGG | - | chr1.1:30270744-30270763 | MS.gene061628:intron | 50.0% | |
| GAATCTTGCATCTCGGTCAC+TGG | - | chr1.1:30272482-30272501 | MS.gene061628:intron | 50.0% | |
| GACAGGGTCCCAATGATAAG+GGG | - | chr1.1:30268397-30268416 | MS.gene061628:intron | 50.0% | |
| GAGCAACTTGGGTGAGTCTT+GGG | - | chr1.1:30270835-30270854 | MS.gene061628:intron | 50.0% | |
| GCACTTTGCACCACCAACAA+TGG | + | chr1.1:30271453-30271472 | None:intergenic | 50.0% | |
| GCTCTTACAGTCTCCTCGAT+CGG | + | chr1.1:30268525-30268544 | None:intergenic | 50.0% | |
| GGAAAACGTGGCACGATTTG+CGG | - | chr1.1:30270494-30270513 | MS.gene061628:intron | 50.0% | |
| GGACAGGGTCCCAATGATAA+GGG | - | chr1.1:30268396-30268415 | MS.gene061628:intron | 50.0% | |
| GGACGGCAGAAGGAATTACT+GGG | + | chr1.1:30273339-30273358 | None:intergenic | 50.0% | |
| TACAACAACTTAGGCCGGTC+AGG | - | chr1.1:30268144-30268163 | MS.gene061628:CDS | 50.0% | |
| TCAAGAACCACGGAGGAATG+TGG | + | chr1.1:30273398-30273417 | None:intergenic | 50.0% | |
| TCCAAAGCAAAACGGCTGTC+TGG | + | chr1.1:30271895-30271914 | None:intergenic | 50.0% | |
| TCCCCCATAGTAGGTCAAGT+TGG | - | chr1.1:30271113-30271132 | MS.gene061628:intron | 50.0% | |
| TCGATCGGCGTACAAACATC+CGG | + | chr1.1:30268510-30268529 | None:intergenic | 50.0% | |
| TGAGCAACTTGGGTGAGTCT+TGG | - | chr1.1:30270834-30270853 | MS.gene061628:intron | 50.0% | |
| TGGCGCTACAAAAGAGTCTC+AGG | - | chr1.1:30272626-30272645 | MS.gene061628:intron | 50.0% | |
| TGGGGAAGATTCATGGGGTT+GGG | - | chr1.1:30270786-30270805 | MS.gene061628:intron | 50.0% | |
| TGTCAGACCGTTTCCAGTCA+AGG | + | chr1.1:30268347-30268366 | None:intergenic | 50.0% | |
| TGTCGAAGAAGTTTACGCCG+TGG | + | chr1.1:30268266-30268285 | None:intergenic | 50.0% | |
| TTAAGGGATCCCTTACCGCT+TGG | - | chr1.1:30271421-30271440 | MS.gene061628:intron | 50.0% | |
| TTCTCTACCACATTCCTCCG+TGG | - | chr1.1:30273388-30273407 | MS.gene061628:intron | 50.0% | |
| TTGGGGAAGATTCATGGGGT+TGG | - | chr1.1:30270785-30270804 | MS.gene061628:intron | 50.0% | |
| ! | AAAGATCTTCTGGGGAGGAC+AGG | - | chr1.1:30268380-30268399 | MS.gene061628:intron | 50.0% |
| ! | AAGATCTTCTGGGGAGGACA+GGG | - | chr1.1:30268381-30268400 | MS.gene061628:intron | 50.0% |
| ! | TCGACAAAGATCTTCTGGGG+AGG | - | chr1.1:30268375-30268394 | MS.gene061628:intron | 50.0% |
| ! | TTCCCAAGAACCCCCTCTTT+TGG | + | chr1.1:30270750-30270769 | None:intergenic | 50.0% |
| !! | AAAGCGTCGTTGAAGAGGCT+GGG | - | chr1.1:30268450-30268469 | MS.gene061628:intron | 50.0% |
| !! | AGGTCAAGTTGGACCGAACT+GGG | - | chr1.1:30271124-30271143 | MS.gene061628:intron | 50.0% |
| !! | GGCTGACTTTTAGACCTGAC+CGG | + | chr1.1:30268161-30268180 | None:intergenic | 50.0% |
| !! | TAGGTCAAGTTGGACCGAAC+TGG | - | chr1.1:30271123-30271142 | MS.gene061628:intron | 50.0% |
| !! | TGGGAGGGGTGTTGTGAATT+CGG | + | chr1.1:30271349-30271368 | None:intergenic | 50.0% |
| !!! | CCGGAGGGAGTACTTTTTGT+TGG | - | chr1.1:30269824-30269843 | MS.gene061628:intron | 50.0% |
| !!! | GGAAAAGGGTTGGTGCCTTT+TGG | - | chr1.1:30270766-30270785 | MS.gene061628:intron | 50.0% |
| AACCTGTTGGGCACACATGG+TGG | - | chr1.1:30270334-30270353 | MS.gene061628:CDS | 55.0% | |
| ACCTGTTGGGCACACATGGT+GGG | - | chr1.1:30270335-30270354 | MS.gene061628:CDS | 55.0% | |
| ACTTGGAGTCCACTTGCGTC+TGG | - | chr1.1:30271832-30271851 | MS.gene061628:intron | 55.0% | |
| AGAAGTTTACGCCGTGGTCG+CGG | + | chr1.1:30268260-30268279 | None:intergenic | 55.0% | |
| AGGTTGAGGGTCTTTGGGTG+AGG | - | chr1.1:30270693-30270712 | MS.gene061628:intron | 55.0% | |
| CAGGAACTCAAGAACCACGG+AGG | + | chr1.1:30273405-30273424 | None:intergenic | 55.0% | |
| CCCATGCTCCGTAGGAAAGT+TGG | + | chr1.1:30268182-30268201 | None:intergenic | 55.0% | |
| CTCCGTGGTTCTTGAGTTCC+TGG | - | chr1.1:30273403-30273422 | MS.gene061628:intron | 55.0% | |
| GAGAACCTGTTGGGCACACA+TGG | - | chr1.1:30270331-30270350 | MS.gene061628:CDS | 55.0% | |
| GCCAACTTTCCTACGGAGCA+TGG | - | chr1.1:30268178-30268197 | MS.gene061628:CDS | 55.0% | |
| GGATGTTTGTACGCCGATCG+AGG | - | chr1.1:30268509-30268528 | MS.gene061628:intron | 55.0% | |
| GGGGTTCTTGGGAAAAGGGT+TGG | - | chr1.1:30270756-30270775 | MS.gene061628:intron | 55.0% | |
| GGGGTTGGGAAACACATGAG+TGG | - | chr1.1:30270800-30270819 | MS.gene061628:intron | 55.0% | |
| GGTCGTGCAGAGGAGATCAT+GGG | - | chr1.1:30268306-30268325 | MS.gene061628:intron | 55.0% | |
| GTAAGGACTCCAGACGCAAG+TGG | + | chr1.1:30271844-30271863 | None:intergenic | 55.0% | |
| GTGGGTTCTCCCCTTGTTGA+GGG | - | chr1.1:30270353-30270372 | MS.gene061628:CDS | 55.0% | |
| ! | AAGCGTCGTTGAAGAGGCTG+GGG | - | chr1.1:30268451-30268470 | MS.gene061628:intron | 55.0% |
| ! | AGACGCAAGTGGACTCCAAG+TGG | + | chr1.1:30271833-30271852 | None:intergenic | 55.0% |
| ! | CTTGCGTCTGGAGTCCTTAC+TGG | - | chr1.1:30271844-30271863 | MS.gene061628:intron | 55.0% |
| !! | CCCAGACAGCCGTTTTGCTT+TGG | - | chr1.1:30271891-30271910 | MS.gene061628:intron | 55.0% |
| !! | GAAAGCGTCGTTGAAGAGGC+TGG | - | chr1.1:30268449-30268468 | MS.gene061628:intron | 55.0% |
| !! | GGACGAAAGCGTCGTTGAAG+AGG | - | chr1.1:30268445-30268464 | MS.gene061628:intron | 55.0% |
| ACCCACCATGTGTGCCCAAC+AGG | + | chr1.1:30270339-30270358 | None:intergenic | 60.0% | |
| CGGTCGTGCAGAGGAGATCA+TGG | - | chr1.1:30268305-30268324 | MS.gene061628:intron | 60.0% | |
| GAGGCTGGGGATGGAGTATG+TGG | - | chr1.1:30268464-30268483 | MS.gene061628:intron | 60.0% | |
| GATCTCCTCTGCACGACCGT+TGG | + | chr1.1:30268304-30268323 | None:intergenic | 60.0% | |
| GGCCGTGAATGGGTGTGTTC+TGG | - | chr1.1:30270448-30270467 | MS.gene061628:intron | 60.0% | |
| GTCGTTGAAGAGGCTGGGGA+TGG | - | chr1.1:30268455-30268474 | MS.gene061628:intron | 60.0% | |
| ! | GGTGGGTTCTCCCCTTGTTG+AGG | - | chr1.1:30270352-30270371 | MS.gene061628:CDS | 60.0% |
| ! | GTCGCGGCAGCATTGGAGAA+GGG | + | chr1.1:30268244-30268263 | None:intergenic | 60.0% |
| !! | GTCTAGCTCTGCTCTGCCAC+TGG | - | chr1.1:30269229-30269248 | MS.gene061628:intron | 60.0% |
| CTACGCCAACGGTCGTGCAG+AGG | - | chr1.1:30268296-30268315 | MS.gene061628:intron | 65.0% | |
| CTCCAATGCTGCCGCGACCA+CGG | - | chr1.1:30268246-30268265 | MS.gene061628:intron | 65.0% | |
| ! | GGTCGCGGCAGCATTGGAGA+AGG | + | chr1.1:30268245-30268264 | None:intergenic | 65.0% |
| CGCCGTGGTCGCGGCAGCAT+TGG | + | chr1.1:30268251-30268270 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 30268138 | 30274048 | 30268138 | ID=MS.gene061628 |
| chr1.1 | mRNA | 30268138 | 30274048 | 30268138 | ID=MS.gene061628.t1;Parent=MS.gene061628 |
| chr1.1 | exon | 30273485 | 30274048 | 30273485 | ID=MS.gene061628.t1.exon1;Parent=MS.gene061628.t1 |
| chr1.1 | CDS | 30273485 | 30274048 | 30273485 | ID=cds.MS.gene061628.t1;Parent=MS.gene061628.t1 |
| chr1.1 | exon | 30270262 | 30270405 | 30270262 | ID=MS.gene061628.t1.exon2;Parent=MS.gene061628.t1 |
| chr1.1 | CDS | 30270262 | 30270405 | 30270262 | ID=cds.MS.gene061628.t1;Parent=MS.gene061628.t1 |
| chr1.1 | exon | 30269539 | 30269703 | 30269539 | ID=MS.gene061628.t1.exon3;Parent=MS.gene061628.t1 |
| chr1.1 | CDS | 30269539 | 30269703 | 30269539 | ID=cds.MS.gene061628.t1;Parent=MS.gene061628.t1 |
| chr1.1 | exon | 30268138 | 30268251 | 30268138 | ID=MS.gene061628.t1.exon4;Parent=MS.gene061628.t1 |
| chr1.1 | CDS | 30268138 | 30268251 | 30268138 | ID=cds.MS.gene061628.t1;Parent=MS.gene061628.t1 |
| Gene Sequence |
| Protein sequence |
