Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022151.t1 | XP_003621684.1 | 95.3 | 344 | 11 | 1 | 1 | 344 | 1 | 339 | 1.60E-190 | 675.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022151.t1 | Q7XT99 | 76.4 | 347 | 72 | 4 | 2 | 343 | 9 | 350 | 2.6e-154 | 546.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022151.t1 | A2Q5A8 | 95.3 | 344 | 11 | 1 | 1 | 344 | 1 | 339 | 1.1e-190 | 675.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022151.t1 | MTR_7g021680 | 95.349 | 344 | 11 | 1 | 1 | 344 | 1 | 339 | 0.0 | 679 |
| MS.gene022151.t1 | MTR_7g021820 | 95.349 | 344 | 11 | 1 | 1 | 344 | 1 | 339 | 0.0 | 679 |
| MS.gene022151.t1 | MTR_7g021850 | 86.297 | 343 | 40 | 3 | 1 | 342 | 1 | 337 | 0.0 | 616 |
| MS.gene022151.t1 | MTR_7g114990 | 57.864 | 337 | 128 | 7 | 7 | 337 | 16 | 344 | 6.72e-138 | 395 |
| MS.gene022151.t1 | MTR_7g114980 | 58.480 | 342 | 126 | 7 | 6 | 337 | 13 | 348 | 1.44e-137 | 395 |
| MS.gene022151.t1 | MTR_1g102750 | 56.012 | 341 | 137 | 7 | 4 | 337 | 5 | 339 | 9.48e-130 | 374 |
| MS.gene022151.t1 | MTR_7g114970 | 55.425 | 341 | 139 | 7 | 6 | 339 | 9 | 343 | 3.81e-127 | 368 |
| MS.gene022151.t1 | MTR_7g115010 | 53.097 | 339 | 130 | 7 | 7 | 337 | 12 | 329 | 5.67e-122 | 354 |
| MS.gene022151.t1 | MTR_7g114980 | 60.839 | 286 | 100 | 5 | 6 | 285 | 13 | 292 | 3.37e-119 | 346 |
| MS.gene022151.t1 | MTR_7g114970 | 59.364 | 283 | 106 | 5 | 6 | 285 | 9 | 285 | 6.35e-115 | 335 |
| MS.gene022151.t1 | MTR_1g102750 | 58.188 | 287 | 111 | 5 | 4 | 287 | 5 | 285 | 1.47e-114 | 334 |
| MS.gene022151.t1 | MTR_7g114970 | 59.220 | 282 | 106 | 5 | 6 | 284 | 9 | 284 | 5.24e-114 | 332 |
| MS.gene022151.t1 | MTR_7g021825 | 89.404 | 151 | 11 | 1 | 157 | 307 | 15 | 160 | 1.27e-95 | 281 |
| MS.gene022151.t1 | MTR_7g114970 | 56.349 | 252 | 99 | 5 | 93 | 339 | 4 | 249 | 1.99e-92 | 276 |
| MS.gene022151.t1 | MTR_7g114970 | 63.590 | 195 | 69 | 2 | 6 | 198 | 9 | 203 | 1.34e-85 | 257 |
| MS.gene022151.t1 | MTR_7g021670 | 93.077 | 130 | 9 | 0 | 1 | 130 | 1 | 130 | 8.70e-85 | 257 |
| MS.gene022151.t1 | MTR_7g021670 | 88.889 | 108 | 12 | 0 | 236 | 343 | 145 | 252 | 8.52e-64 | 203 |
| MS.gene022151.t1 | MTR_7g114970 | 54.589 | 207 | 83 | 5 | 138 | 339 | 1 | 201 | 1.92e-69 | 216 |
| MS.gene022151.t1 | MTR_7g021685 | 89.855 | 69 | 7 | 0 | 1 | 69 | 1 | 69 | 1.57e-40 | 138 |
| MS.gene022151.t1 | MTR_3g449790 | 32.362 | 343 | 180 | 13 | 6 | 319 | 37 | 356 | 1.50e-31 | 122 |
| MS.gene022151.t1 | MTR_3g449790 | 31.778 | 343 | 176 | 13 | 6 | 319 | 37 | 350 | 6.28e-31 | 120 |
| MS.gene022151.t1 | MTR_1g102740 | 47.222 | 108 | 47 | 2 | 237 | 337 | 3 | 107 | 4.92e-28 | 105 |
| MS.gene022151.t1 | MTR_3g092140 | 27.575 | 301 | 173 | 13 | 38 | 315 | 71 | 349 | 2.71e-21 | 95.1 |
| MS.gene022151.t1 | MTR_1g047250 | 26.807 | 332 | 204 | 12 | 8 | 317 | 5 | 319 | 1.96e-19 | 88.2 |
| MS.gene022151.t1 | MTR_1g042730 | 28.125 | 352 | 199 | 13 | 8 | 314 | 65 | 407 | 2.48e-19 | 88.6 |
| MS.gene022151.t1 | MTR_4g092750 | 29.412 | 221 | 136 | 8 | 8 | 218 | 5 | 215 | 7.38e-14 | 71.6 |
| MS.gene022151.t1 | MTR_4g092750 | 29.412 | 221 | 136 | 8 | 8 | 218 | 5 | 215 | 8.60e-14 | 71.6 |
| MS.gene022151.t1 | MTR_4g092750 | 29.412 | 221 | 136 | 8 | 8 | 218 | 5 | 215 | 1.13e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022151.t1 | AT1G60710 | 75.510 | 343 | 76 | 3 | 4 | 343 | 7 | 344 | 0.0 | 533 |
| MS.gene022151.t1 | AT1G60730 | 75.219 | 343 | 77 | 3 | 4 | 343 | 7 | 344 | 0.0 | 530 |
| MS.gene022151.t1 | AT1G60690 | 72.965 | 344 | 85 | 3 | 4 | 344 | 7 | 345 | 0.0 | 525 |
| MS.gene022151.t1 | AT1G60730 | 71.074 | 363 | 77 | 4 | 4 | 343 | 7 | 364 | 0.0 | 518 |
| MS.gene022151.t1 | AT1G60680 | 73.623 | 345 | 82 | 4 | 4 | 344 | 7 | 346 | 0.0 | 517 |
| MS.gene022151.t1 | AT1G10810 | 71.014 | 345 | 92 | 3 | 2 | 343 | 5 | 344 | 1.79e-178 | 498 |
| MS.gene022151.t1 | AT1G60750 | 71.221 | 344 | 73 | 5 | 4 | 343 | 8 | 329 | 4.39e-175 | 489 |
| MS.gene022151.t1 | AT1G10810 | 70.397 | 277 | 74 | 3 | 70 | 343 | 21 | 292 | 5.76e-139 | 396 |
| MS.gene022151.t1 | AT1G60680 | 75.536 | 233 | 50 | 3 | 4 | 234 | 7 | 234 | 2.72e-124 | 357 |
| MS.gene022151.t1 | AT1G10810 | 72.385 | 239 | 60 | 2 | 2 | 239 | 5 | 238 | 3.95e-120 | 347 |
| MS.gene022151.t1 | AT1G60730 | 74.101 | 139 | 35 | 1 | 4 | 141 | 7 | 145 | 9.84e-71 | 218 |
| MS.gene022151.t1 | AT1G06690 | 28.614 | 339 | 198 | 11 | 6 | 319 | 48 | 367 | 4.33e-26 | 107 |
| MS.gene022151.t1 | AT5G53580 | 31.419 | 296 | 152 | 13 | 46 | 315 | 80 | 350 | 6.07e-26 | 107 |
| MS.gene022151.t1 | AT1G04690 | 27.389 | 314 | 191 | 11 | 8 | 301 | 5 | 301 | 2.78e-22 | 96.3 |
| MS.gene022151.t1 | AT4G33670 | 25.217 | 345 | 195 | 13 | 1 | 319 | 1 | 308 | 3.16e-19 | 87.4 |
| MS.gene022151.t1 | AT1G04420 | 25.978 | 358 | 209 | 14 | 8 | 319 | 60 | 407 | 1.13e-18 | 86.7 |
Find 79 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGATACCTCTGACATTTA+TGG | 0.106156 | 7.3:+77916843 | MS.gene022151:CDS |
| TTGATTCAAGTTCTCAATTT+TGG | 0.179947 | 7.3:-77918898 | None:intergenic |
| TCCAACTGCACAGCTGTTAT+TGG | 0.217840 | 7.3:-77917517 | None:intergenic |
| CATACCAATGAAGTTCTTCT+TGG | 0.226890 | 7.3:+77916870 | MS.gene022151:CDS |
| ATACTCCACCACTCTCTTCT+TGG | 0.280266 | 7.3:+77919039 | MS.gene022151:CDS |
| GTTGAATTGGCTACTAAGTT+TGG | 0.296790 | 7.3:+77917050 | MS.gene022151:CDS |
| ATGAGCATGTCTGCTTTCTA+TGG | 0.353634 | 7.3:+77916753 | MS.gene022151:CDS |
| ATTTGACAAAGTTAATGAAT+TGG | 0.354570 | 7.3:+77918788 | MS.gene022151:CDS |
| GTCTTTAGCAGATGCTGTTA+AGG | 0.356223 | 7.3:+77918974 | MS.gene022151:CDS |
| AGTGAGAGAGAAGGTTGAAT+TGG | 0.360017 | 7.3:+77917037 | MS.gene022151:CDS |
| TTTATTAGGGAACTGGGTAT+TGG | 0.362689 | 7.3:+77917834 | MS.gene022151:intron |
| TGAGCTCTTCTGATTGTTGC+AGG | 0.366246 | 7.3:-77917484 | None:intergenic |
| ATCATGTCAGGTTCAGGTTT+AGG | 0.367686 | 7.3:-77916780 | None:intergenic |
| GCTGTTAAGGGTGGTAGATA+TGG | 0.379383 | 7.3:+77918987 | MS.gene022151:CDS |
| AAACAAACCGTGACTTCAAT+TGG | 0.384532 | 7.3:-77917209 | None:intergenic |
| AGAGCAATCATGTCAGGTTC+AGG | 0.397066 | 7.3:-77916786 | None:intergenic |
| CTTTCCAAGAAGAACTTCAT+TGG | 0.408269 | 7.3:-77916874 | None:intergenic |
| CTGTTAAGGGTGGTAGATAT+GGG | 0.417262 | 7.3:+77918988 | MS.gene022151:CDS |
| CACCTCAGCTTGCACTAGCC+TGG | 0.427311 | 7.3:+77918832 | MS.gene022151:CDS |
| TAAACTAACACAAGAAGAAA+TGG | 0.436815 | 7.3:+77918941 | MS.gene022151:CDS |
| TCTTTAGCAGATGCTGTTAA+GGG | 0.437336 | 7.3:+77918975 | MS.gene022151:CDS |
| TTTGAGATCTGTGGTGATCC+AGG | 0.439708 | 7.3:+77917095 | MS.gene022151:CDS |
| ATATAGTCTGATTCTGCTGC+AGG | 0.450000 | 7.3:-77918767 | None:intergenic |
| GCAGTAGGAAGAATGAAGTT+AGG | 0.450787 | 7.3:+77916690 | MS.gene022151:CDS |
| ATAGTTGCATATAGTCCTCT+TGG | 0.466082 | 7.3:+77917858 | MS.gene022151:CDS |
| TAATGAATTGGCTACAAAGA+AGG | 0.471421 | 7.3:+77918800 | MS.gene022151:CDS |
| ACTTACCACAGGATGATTAC+CGG | 0.478397 | 7.3:+77917919 | MS.gene022151:CDS |
| AAAGATGTCTGCCCAATACC+TGG | 0.481454 | 7.3:+77918870 | MS.gene022151:CDS |
| TCCAATAACAGCTGTGCAGT+TGG | 0.490955 | 7.3:+77917516 | MS.gene022151:CDS |
| AGAAGAACTTCATTGGTATG+AGG | 0.491306 | 7.3:-77916867 | None:intergenic |
| CAAGCTTCTCTCACATAACC+TGG | 0.499607 | 7.3:-77917113 | None:intergenic |
| CAATGAAGTTCTTCTTGGAA+AGG | 0.506244 | 7.3:+77916875 | MS.gene022151:CDS |
| ATTCACCATGCTATACAATC+TGG | 0.506451 | 7.3:+77916810 | MS.gene022151:CDS |
| ATGGTTGCAAATCTGCAAGT+TGG | 0.506732 | 7.3:-77917580 | None:intergenic |
| GAAGTGTCCTTGCAAGGACT+TGG | 0.508887 | 7.3:+77916726 | MS.gene022151:CDS |
| TGCAGTTGGAGTGGTCACTC+TGG | 0.512586 | 7.3:+77917530 | MS.gene022151:CDS |
| CTTAAGAAACTTGTTGAAGA+GGG | 0.519358 | 7.3:+77917427 | MS.gene022151:CDS |
| TCTTCTGATTGTTGCAGGCG+AGG | 0.520048 | 7.3:-77917479 | None:intergenic |
| GAAGTTAGGATCACAAGGAA+TGG | 0.532873 | 7.3:+77916704 | MS.gene022151:CDS |
| AATGAATTGGCTACAAAGAA+GGG | 0.535628 | 7.3:+77918801 | MS.gene022151:CDS |
| ACTAAGTTTGGAGTCAGAGC+TGG | 0.539575 | 7.3:+77917062 | MS.gene022151:CDS |
| TAGTTGCATATAGTCCTCTT+GGG | 0.540181 | 7.3:+77917859 | MS.gene022151:CDS |
| TTTGAAGGGAGTGAGAGAGA+AGG | 0.541092 | 7.3:+77917028 | MS.gene022151:CDS |
| CAGGCTAGTGCAAGCTGAGG+TGG | 0.541943 | 7.3:-77918831 | None:intergenic |
| GCATATAGTCCTCTTGGGCG+AGG | 0.551187 | 7.3:+77917864 | MS.gene022151:CDS |
| TCGTCTTCCAATTGAAGTCA+CGG | 0.553776 | 7.3:+77917202 | MS.gene022151:CDS |
| TGAATGAGAGCAATCATGTC+AGG | 0.558885 | 7.3:-77916792 | None:intergenic |
| TTTGGAGTCAGAGCTGGTGA+TGG | 0.567905 | 7.3:+77917068 | MS.gene022151:CDS |
| GAGAACTTGAATCAAAACAT+TGG | 0.571832 | 7.3:+77918906 | MS.gene022151:CDS |
| TTGGAGTCAGAGCTGGTGAT+GGG | 0.573275 | 7.3:+77917069 | MS.gene022151:CDS |
| GTTAATTGACAACTTACCAC+AGG | 0.573348 | 7.3:+77917908 | MS.gene022151:CDS |
| GAAGAACTTCATTGGTATGA+GGG | 0.573616 | 7.3:-77916866 | None:intergenic |
| GCTTAAGAAACTTGTTGAAG+AGG | 0.577571 | 7.3:+77917426 | MS.gene022151:CDS |
| GTCACTCTGGTCAAGAGATG+TGG | 0.577946 | 7.3:+77917543 | MS.gene022151:CDS |
| ATGTCAGGTTCAGGTTTAGG+AGG | 0.578905 | 7.3:-77916777 | None:intergenic |
| CATGCAACCAAGTCCTTGCA+AGG | 0.590784 | 7.3:-77916733 | None:intergenic |
| GGAATGGAAGTGTCCTTGCA+AGG | 0.592055 | 7.3:+77916720 | MS.gene022151:CDS |
| TATGTGAGAGAAGCTTGTGA+GGG | 0.599905 | 7.3:+77917119 | MS.gene022151:CDS |
| TAACAGCTGTGCAGTTGGAG+TGG | 0.606322 | 7.3:+77917521 | MS.gene022151:CDS |
| TTATGTGAGAGAAGCTTGTG+AGG | 0.606963 | 7.3:+77917118 | MS.gene022151:CDS |
| ACCACAGGATGATTACCGGA+AGG | 0.619947 | 7.3:+77917923 | MS.gene022151:CDS |
| GTCATTGCAATGGCAGCAGT+AGG | 0.625802 | 7.3:+77916675 | None:intergenic |
| TGATACCAGATTGTATAGCA+TGG | 0.627951 | 7.3:-77916815 | None:intergenic |
| AAAATACATCGGTTTGTCTG+AGG | 0.628922 | 7.3:+77917456 | MS.gene022151:CDS |
| TTAAGAAACTTGTTGAAGAG+GGG | 0.630026 | 7.3:+77917428 | MS.gene022151:CDS |
| GAAAAGAATCCTCGCCCAAG+AGG | 0.639338 | 7.3:-77917873 | None:intergenic |
| AGAATGAAGTTAGGATCACA+AGG | 0.639560 | 7.3:+77916699 | MS.gene022151:CDS |
| TTAGCAGATGCTGTTAAGGG+TGG | 0.639881 | 7.3:+77918978 | MS.gene022151:CDS |
| ACTCTGGTCAAGAGATGTGG+AGG | 0.640036 | 7.3:+77917546 | MS.gene022151:CDS |
| GCTTTCCAAGAAGAGAGTGG+TGG | 0.651055 | 7.3:-77919044 | None:intergenic |
| ATGGGGATGAGATAAGTACA+TGG | 0.656484 | 7.3:+77919006 | MS.gene022151:CDS |
| ACCTTCCGGTAATCATCCTG+TGG | 0.664100 | 7.3:-77917924 | None:intergenic |
| ACAGCTTTCCAAGAAGAGAG+TGG | 0.666396 | 7.3:-77919047 | None:intergenic |
| ATGAGGGCCATAAATGTCAG+AGG | 0.669210 | 7.3:-77916850 | None:intergenic |
| AGCCAGGCTAGTGCAAGCTG+AGG | 0.684598 | 7.3:-77918834 | None:intergenic |
| GAGGGGAAGATAAAATACAT+CGG | 0.690929 | 7.3:+77917445 | MS.gene022151:CDS |
| TGTTAAGGGTGGTAGATATG+GGG | 0.698011 | 7.3:+77918989 | MS.gene022151:CDS |
| GATGGGAAATTTGAGATCTG+TGG | 0.703407 | 7.3:+77917086 | MS.gene022151:CDS |
| CTAGCCTGGCTTCATCACCA+AGG | 0.706704 | 7.3:+77918846 | MS.gene022151:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCAAATTATCAAAATAA+TGG | - | chr7.3:77916955-77916974 | None:intergenic | 10.0% |
| !! | TATACATATATATAAGATTA+AGG | - | chr7.3:77918703-77918722 | None:intergenic | 10.0% |
| !!! | ATTATTTTGATAATTTGATT+TGG | + | chr7.3:77916954-77916973 | MS.gene022151:intron | 10.0% |
| !!! | ATTTATGATTTTCTTTATTA+GGG | + | chr7.3:77917821-77917840 | MS.gene022151:intron | 10.0% |
| !! | AATCAAAAGAAAAACTAAAA+GGG | - | chr7.3:77916917-77916936 | None:intergenic | 15.0% |
| !! | ACAATTTAAACAAGTAAATT+TGG | - | chr7.3:77918110-77918129 | None:intergenic | 15.0% |
| !! | ATTCAAAGTAAATATATAGT+CGG | + | chr7.3:77918167-77918186 | MS.gene022151:intron | 15.0% |
| !! | TAATCAAAAGAAAAACTAAA+AGG | - | chr7.3:77916918-77916937 | None:intergenic | 15.0% |
| !! | TACTATATAACAAAACATAA+TGG | - | chr7.3:77917602-77917621 | None:intergenic | 15.0% |
| !!! | GATTTATGATTTTCTTTATT+AGG | + | chr7.3:77917820-77917839 | MS.gene022151:intron | 15.0% |
| !!! | TGATTGTGAATTTTTTATAT+AGG | + | chr7.3:77917004-77917023 | MS.gene022151:intron | 15.0% |
| !! | ATTTGACAAAGTTAATGAAT+TGG | + | chr7.3:77918788-77918807 | MS.gene022151:CDS | 20.0% |
| !! | TTATATAGTATTTCTCTTTC+TGG | + | chr7.3:77917612-77917631 | MS.gene022151:intron | 20.0% |
| !! | TTGAATGTAATTACATATGT+TGG | + | chr7.3:77917729-77917748 | MS.gene022151:intron | 20.0% |
| !!! | ACCAAAAGGTATAATAAATT+AGG | - | chr7.3:77917303-77917322 | None:intergenic | 20.0% |
| !!! | ATTTATTATACCTTTTGGTT+TGG | + | chr7.3:77917304-77917323 | MS.gene022151:intron | 20.0% |
| !!! | ATTTTTTATATAGGCTTTGA+AGG | + | chr7.3:77917013-77917032 | MS.gene022151:intron | 20.0% |
| !!! | TCCTAATTTATTATACCTTT+TGG | + | chr7.3:77917299-77917318 | MS.gene022151:intron | 20.0% |
| !!! | TTATGCGTATATGTATTTTT+CGG | - | chr7.3:77918467-77918486 | None:intergenic | 20.0% |
| !!! | TTCTTTTGATTAGAATTTCT+GGG | + | chr7.3:77916926-77916945 | MS.gene022151:intron | 20.0% |
| !!! | TTTCTTTTGATTAGAATTTC+TGG | + | chr7.3:77916925-77916944 | MS.gene022151:intron | 20.0% |
| !!! | TTTTTTATATAGGCTTTGAA+GGG | + | chr7.3:77917014-77917033 | MS.gene022151:intron | 20.0% |
| ! | AAATATTCAACCAAACCAAA+AGG | - | chr7.3:77917317-77917336 | None:intergenic | 25.0% |
| ! | AAGCTACCAAAATCAAATTA+GGG | - | chr7.3:77917251-77917270 | None:intergenic | 25.0% |
| ! | AAGTAATTCACATGAATTTC+TGG | - | chr7.3:77917969-77917988 | None:intergenic | 25.0% |
| ! | ATATACGCATAAATCAATCA+TGG | + | chr7.3:77918475-77918494 | MS.gene022151:intron | 25.0% |
| ! | ATATATAAAATGACAATGCG+TGG | + | chr7.3:77917363-77917382 | MS.gene022151:intron | 25.0% |
| ! | CTTAATAAGATACAAGATGT+CGG | - | chr7.3:77918392-77918411 | None:intergenic | 25.0% |
| ! | TAAACTAACACAAGAAGAAA+TGG | + | chr7.3:77918941-77918960 | MS.gene022151:CDS | 25.0% |
| ! | TAAGCTACCAAAATCAAATT+AGG | - | chr7.3:77917252-77917271 | None:intergenic | 25.0% |
| ! | TTAATAAGATACAAGATGTC+GGG | - | chr7.3:77918391-77918410 | None:intergenic | 25.0% |
| ! | TTTAAATTGTGTAATGTGTG+TGG | + | chr7.3:77918120-77918139 | MS.gene022151:intron | 25.0% |
| ! | TTTAGTCCATAAAACAGTTT+GGG | + | chr7.3:77918198-77918217 | MS.gene022151:intron | 25.0% |
| !! | ATTTTCTTTATTAGGGAACT+GGG | + | chr7.3:77917828-77917847 | MS.gene022151:intron | 25.0% |
| !! | TTTTAGTCCATAAAACAGTT+TGG | + | chr7.3:77918197-77918216 | MS.gene022151:intron | 25.0% |
| !!! | CATTCATTTTTTCTCAGTAT+CGG | - | chr7.3:77918441-77918460 | None:intergenic | 25.0% |
| !!! | TGATCACAATAATCGTTTTT+AGG | + | chr7.3:77918003-77918022 | MS.gene022151:intron | 25.0% |
| !!! | TTGATTCAAGTTCTCAATTT+TGG | - | chr7.3:77918901-77918920 | None:intergenic | 25.0% |
| AAATTAGGGAGAACTGAAAA+GGG | - | chr7.3:77917237-77917256 | None:intergenic | 30.0% | |
| AATGAATTGGCTACAAAGAA+GGG | + | chr7.3:77918801-77918820 | MS.gene022151:CDS | 30.0% | |
| ATACAAACAGGTCCATATTA+TGG | + | chr7.3:77918287-77918306 | MS.gene022151:intron | 30.0% | |
| CAATCTTCTCAAATTGTTAC+CGG | - | chr7.3:77917703-77917722 | None:intergenic | 30.0% | |
| CATCAAGTAGTTCATTTCAT+AGG | - | chr7.3:77917341-77917360 | None:intergenic | 30.0% | |
| GAGAACTTGAATCAAAACAT+TGG | + | chr7.3:77918906-77918925 | MS.gene022151:CDS | 30.0% | |
| TAATGAATTGGCTACAAAGA+AGG | + | chr7.3:77918800-77918819 | MS.gene022151:CDS | 30.0% | |
| TGATCAACGATGTAAGTTAA+GGG | - | chr7.3:77918522-77918541 | None:intergenic | 30.0% | |
| TTGATCAACGATGTAAGTTA+AGG | - | chr7.3:77918523-77918542 | None:intergenic | 30.0% | |
| ! | AAAACTTTTGCATCATGATG+TGG | + | chr7.3:77917271-77917290 | MS.gene022151:intron | 30.0% |
| ! | AAATTTGGTAATTCTGACCA+TGG | - | chr7.3:77918095-77918114 | None:intergenic | 30.0% |
| ! | GATTTTCTTTATTAGGGAAC+TGG | + | chr7.3:77917827-77917846 | MS.gene022151:intron | 30.0% |
| ! | TGGGTTTTCTTTGTAAGATT+GGG | + | chr7.3:77917401-77917420 | MS.gene022151:intron | 30.0% |
| ! | TTGGGTTTTCTTTGTAAGAT+TGG | + | chr7.3:77917400-77917419 | MS.gene022151:intron | 30.0% |
| !! | AGTTCTCCCTAATTTGATTT+TGG | + | chr7.3:77917242-77917261 | MS.gene022151:intron | 30.0% |
| !! | CTTAAGAAACTTGTTGAAGA+GGG | + | chr7.3:77917427-77917446 | MS.gene022151:CDS | 30.0% |
| !! | TTAAGAAACTTGTTGAAGAG+GGG | + | chr7.3:77917428-77917447 | MS.gene022151:CDS | 30.0% |
| AAACAAACCGTGACTTCAAT+TGG | - | chr7.3:77917212-77917231 | None:intergenic | 35.0% | |
| ACTAAAAGGGTAAGAGAAAG+TGG | - | chr7.3:77916904-77916923 | None:intergenic | 35.0% | |
| ACTTACATCGTTGATCAATC+AGG | + | chr7.3:77918525-77918544 | MS.gene022151:intron | 35.0% | |
| AGAAGAACTTCATTGGTATG+AGG | - | chr7.3:77916870-77916889 | None:intergenic | 35.0% | |
| AGAATGAAGTTAGGATCACA+AGG | + | chr7.3:77916699-77916718 | MS.gene022151:CDS | 35.0% | |
| ATAGTTGCATATAGTCCTCT+TGG | + | chr7.3:77917858-77917877 | MS.gene022151:CDS | 35.0% | |
| ATTCACCATGCTATACAATC+TGG | + | chr7.3:77916810-77916829 | MS.gene022151:CDS | 35.0% | |
| CAAATTAGGGAGAACTGAAA+AGG | - | chr7.3:77917238-77917257 | None:intergenic | 35.0% | |
| CAATGAAGTTCTTCTTGGAA+AGG | + | chr7.3:77916875-77916894 | MS.gene022151:CDS | 35.0% | |
| CAGAACTCTGTAATACAAAC+AGG | + | chr7.3:77918275-77918294 | MS.gene022151:intron | 35.0% | |
| CATACCAATGAAGTTCTTCT+TGG | + | chr7.3:77916870-77916889 | MS.gene022151:CDS | 35.0% | |
| CCATAAAACAGTTTGGGAAT+AGG | + | chr7.3:77918204-77918223 | MS.gene022151:intron | 35.0% | |
| CTACAGAACATGGTATGTTA+TGG | - | chr7.3:77918343-77918362 | None:intergenic | 35.0% | |
| CTCATAATAGCCTCTTTGTT+TGG | + | chr7.3:77918556-77918575 | MS.gene022151:intron | 35.0% | |
| CTTACATCGTTGATCAATCA+GGG | + | chr7.3:77918526-77918545 | MS.gene022151:intron | 35.0% | |
| CTTGATACCTCTGACATTTA+TGG | + | chr7.3:77916843-77916862 | MS.gene022151:CDS | 35.0% | |
| CTTTCCAAGAAGAACTTCAT+TGG | - | chr7.3:77916877-77916896 | None:intergenic | 35.0% | |
| GAAGAACTTCATTGGTATGA+GGG | - | chr7.3:77916869-77916888 | None:intergenic | 35.0% | |
| GAGGGGAAGATAAAATACAT+CGG | + | chr7.3:77917445-77917464 | MS.gene022151:CDS | 35.0% | |
| GTTAATTGACAACTTACCAC+AGG | + | chr7.3:77917908-77917927 | MS.gene022151:CDS | 35.0% | |
| GTTGAATTGGCTACTAAGTT+TGG | + | chr7.3:77917050-77917069 | MS.gene022151:CDS | 35.0% | |
| TAAAATGCAGCTACAGAACA+TGG | - | chr7.3:77918353-77918372 | None:intergenic | 35.0% | |
| TAGTTGCATATAGTCCTCTT+GGG | + | chr7.3:77917859-77917878 | MS.gene022151:CDS | 35.0% | |
| TCTTTAGCAGATGCTGTTAA+GGG | + | chr7.3:77918975-77918994 | MS.gene022151:CDS | 35.0% | |
| TGATACCAGATTGTATAGCA+TGG | - | chr7.3:77916818-77916837 | None:intergenic | 35.0% | |
| TTGTGATAGACCAAACAAAG+AGG | - | chr7.3:77918569-77918588 | None:intergenic | 35.0% | |
| TTTATTAGGGAACTGGGTAT+TGG | + | chr7.3:77917834-77917853 | MS.gene022151:intron | 35.0% | |
| ! | ATGTTCTGTAGCTGCATTTT+AGG | + | chr7.3:77918352-77918371 | MS.gene022151:intron | 35.0% |
| ! | CCTATTCCCAAACTGTTTTA+TGG | - | chr7.3:77918207-77918226 | None:intergenic | 35.0% |
| ! | GGGTTTTCTTTGTAAGATTG+GGG | + | chr7.3:77917402-77917421 | MS.gene022151:intron | 35.0% |
| !! | AAAATACATCGGTTTGTCTG+AGG | + | chr7.3:77917456-77917475 | MS.gene022151:CDS | 35.0% |
| !! | GCTTAAGAAACTTGTTGAAG+AGG | + | chr7.3:77917426-77917445 | MS.gene022151:CDS | 35.0% |
| !!! | CATTTTTTCCACAAACCTTC+CGG | - | chr7.3:77917941-77917960 | None:intergenic | 35.0% |
| !!! | GTGGTGACTTCAACTTTTTT+GGG | + | chr7.3:77917382-77917401 | MS.gene022151:intron | 35.0% |
| ACTTACCACAGGATGATTAC+CGG | + | chr7.3:77917919-77917938 | MS.gene022151:CDS | 40.0% | |
| AGCACAGACAATAACACGTT+TGG | - | chr7.3:77917775-77917794 | None:intergenic | 40.0% | |
| AGTGAGAGAGAAGGTTGAAT+TGG | + | chr7.3:77917037-77917056 | MS.gene022151:CDS | 40.0% | |
| ATATAGTCTGATTCTGCTGC+AGG | - | chr7.3:77918770-77918789 | None:intergenic | 40.0% | |
| ATGAGCATGTCTGCTTTCTA+TGG | + | chr7.3:77916753-77916772 | MS.gene022151:CDS | 40.0% | |
| ATGGGGATGAGATAAGTACA+TGG | + | chr7.3:77919006-77919025 | MS.gene022151:CDS | 40.0% | |
| ATGGTTGCAAATCTGCAAGT+TGG | - | chr7.3:77917583-77917602 | None:intergenic | 40.0% | |
| CTGTTAAGGGTGGTAGATAT+GGG | + | chr7.3:77918988-77919007 | MS.gene022151:CDS | 40.0% | |
| GAAGTTAGGATCACAAGGAA+TGG | + | chr7.3:77916704-77916723 | MS.gene022151:CDS | 40.0% | |
| GCAGTAGGAAGAATGAAGTT+AGG | + | chr7.3:77916690-77916709 | MS.gene022151:CDS | 40.0% | |
| GTCTTTAGCAGATGCTGTTA+AGG | + | chr7.3:77918974-77918993 | MS.gene022151:CDS | 40.0% | |
| TATGTGAGAGAAGCTTGTGA+GGG | + | chr7.3:77917119-77917138 | MS.gene022151:CDS | 40.0% | |
| TCACACATAGCGCCATAATA+TGG | - | chr7.3:77918302-77918321 | None:intergenic | 40.0% | |
| TCGTCTTCCAATTGAAGTCA+CGG | + | chr7.3:77917202-77917221 | MS.gene022151:CDS | 40.0% | |
| TGAATGAGAGCAATCATGTC+AGG | - | chr7.3:77916795-77916814 | None:intergenic | 40.0% | |
| TGTTAAGGGTGGTAGATATG+GGG | + | chr7.3:77918989-77919008 | MS.gene022151:CDS | 40.0% | |
| TTATGTGAGAGAAGCTTGTG+AGG | + | chr7.3:77917118-77917137 | MS.gene022151:CDS | 40.0% | |
| ! | ATCATGTCAGGTTCAGGTTT+AGG | - | chr7.3:77916783-77916802 | None:intergenic | 40.0% |
| ! | GATGGGAAATTTGAGATCTG+TGG | + | chr7.3:77917086-77917105 | MS.gene022151:CDS | 40.0% |
| ! | TGAAGCACTTACATAGACAC+TGG | + | chr7.3:77917667-77917686 | MS.gene022151:intron | 40.0% |
| ! | TTTTGGTCGTTCCAGGTATT+GGG | - | chr7.3:77918884-77918903 | None:intergenic | 40.0% |
| !! | ATTTTGGTCGTTCCAGGTAT+TGG | - | chr7.3:77918885-77918904 | None:intergenic | 40.0% |
| !! | TTCTCAATTTTGGTCGTTCC+AGG | - | chr7.3:77918891-77918910 | None:intergenic | 40.0% |
| !!! | AGGTTTTCAGGTTGAAATCG+AGG | - | chr7.3:77918750-77918769 | None:intergenic | 40.0% |
| !!! | CGTGGTGACTTCAACTTTTT+TGG | + | chr7.3:77917381-77917400 | MS.gene022151:intron | 40.0% |
| AAAGATGTCTGCCCAATACC+TGG | + | chr7.3:77918870-77918889 | MS.gene022151:CDS | 45.0% | |
| ACAGCTTTCCAAGAAGAGAG+TGG | - | chr7.3:77919050-77919069 | None:intergenic | 45.0% | |
| AGAGCAATCATGTCAGGTTC+AGG | - | chr7.3:77916789-77916808 | None:intergenic | 45.0% | |
| ATACTCCACCACTCTCTTCT+TGG | + | chr7.3:77919039-77919058 | MS.gene022151:CDS | 45.0% | |
| ATGAGGGCCATAAATGTCAG+AGG | - | chr7.3:77916853-77916872 | None:intergenic | 45.0% | |
| CAAGCTTCTCTCACATAACC+TGG | - | chr7.3:77917116-77917135 | None:intergenic | 45.0% | |
| GATGATTACCGGAAGGTTTG+TGG | + | chr7.3:77917930-77917949 | MS.gene022151:intron | 45.0% | |
| GCTGTTAAGGGTGGTAGATA+TGG | + | chr7.3:77918987-77919006 | MS.gene022151:CDS | 45.0% | |
| GTTGTATCCAGTGTCTGTGT+TGG | - | chr7.3:77918417-77918436 | None:intergenic | 45.0% | |
| TCCAACTGCACAGCTGTTAT+TGG | - | chr7.3:77917520-77917539 | None:intergenic | 45.0% | |
| TCCAATAACAGCTGTGCAGT+TGG | + | chr7.3:77917516-77917535 | MS.gene022151:CDS | 45.0% | |
| TGAGCTCTTCTGATTGTTGC+AGG | - | chr7.3:77917487-77917506 | None:intergenic | 45.0% | |
| TTAAGCACCAACACAGACAC+TGG | + | chr7.3:77918407-77918426 | MS.gene022151:intron | 45.0% | |
| TTAGCAGATGCTGTTAAGGG+TGG | + | chr7.3:77918978-77918997 | MS.gene022151:CDS | 45.0% | |
| TTTGAAGGGAGTGAGAGAGA+AGG | + | chr7.3:77917028-77917047 | MS.gene022151:CDS | 45.0% | |
| ! | ACTAAGTTTGGAGTCAGAGC+TGG | + | chr7.3:77917062-77917081 | MS.gene022151:CDS | 45.0% |
| ! | ATGTCAGGTTCAGGTTTAGG+AGG | - | chr7.3:77916780-77916799 | None:intergenic | 45.0% |
| ! | TGATTCTGCTGCAGGTTTTC+AGG | - | chr7.3:77918762-77918781 | None:intergenic | 45.0% |
| ! | TTGGGCAGACATCTTTTCCT+TGG | - | chr7.3:77918866-77918885 | None:intergenic | 45.0% |
| ! | TTTGAGATCTGTGGTGATCC+AGG | + | chr7.3:77917095-77917114 | MS.gene022151:CDS | 45.0% |
| !! | TGTTGGTGTCGTCTTAGTGT+CGG | + | chr7.3:77917746-77917765 | MS.gene022151:intron | 45.0% |
| !!! | TTTTCCTTGGTGATGAAGCC+AGG | - | chr7.3:77918853-77918872 | None:intergenic | 45.0% |
| ACCACAGGATGATTACCGGA+AGG | + | chr7.3:77917923-77917942 | MS.gene022151:CDS | 50.0% | |
| ACCTTCCGGTAATCATCCTG+TGG | - | chr7.3:77917927-77917946 | None:intergenic | 50.0% | |
| ACTCTGGTCAAGAGATGTGG+AGG | + | chr7.3:77917546-77917565 | MS.gene022151:CDS | 50.0% | |
| CATGCAACCAAGTCCTTGCA+AGG | - | chr7.3:77916736-77916755 | None:intergenic | 50.0% | |
| GAAAAGAATCCTCGCCCAAG+AGG | - | chr7.3:77917876-77917895 | None:intergenic | 50.0% | |
| GCTTTCCAAGAAGAGAGTGG+TGG | - | chr7.3:77919047-77919066 | None:intergenic | 50.0% | |
| GTCACTCTGGTCAAGAGATG+TGG | + | chr7.3:77917543-77917562 | MS.gene022151:CDS | 50.0% | |
| TAACAGCTGTGCAGTTGGAG+TGG | + | chr7.3:77917521-77917540 | MS.gene022151:CDS | 50.0% | |
| TCTTCTGATTGTTGCAGGCG+AGG | - | chr7.3:77917482-77917501 | None:intergenic | 50.0% | |
| TTGGAGTCAGAGCTGGTGAT+GGG | + | chr7.3:77917069-77917088 | MS.gene022151:CDS | 50.0% | |
| ! | GAAGTGTCCTTGCAAGGACT+TGG | + | chr7.3:77916726-77916745 | MS.gene022151:CDS | 50.0% |
| ! | GGGCGAGGATTCTTTTCAAC+AGG | + | chr7.3:77917879-77917898 | MS.gene022151:CDS | 50.0% |
| ! | TTTGGAGTCAGAGCTGGTGA+TGG | + | chr7.3:77917068-77917087 | MS.gene022151:CDS | 50.0% |
| !! | GGAATGGAAGTGTCCTTGCA+AGG | + | chr7.3:77916720-77916739 | MS.gene022151:CDS | 50.0% |
| !! | GTTCACAGACTGATTCGCCA+TGG | + | chr7.3:77918075-77918094 | MS.gene022151:intron | 50.0% |
| AGACACTGGACACGACACTC+CGG | + | chr7.3:77917681-77917700 | MS.gene022151:intron | 55.0% | |
| CTAGCCTGGCTTCATCACCA+AGG | + | chr7.3:77918846-77918865 | MS.gene022151:CDS | 55.0% | |
| GCATATAGTCCTCTTGGGCG+AGG | + | chr7.3:77917864-77917883 | MS.gene022151:CDS | 55.0% | |
| TGCAGTTGGAGTGGTCACTC+TGG | + | chr7.3:77917530-77917549 | MS.gene022151:CDS | 55.0% | |
| AGCCAGGCTAGTGCAAGCTG+AGG | - | chr7.3:77918837-77918856 | None:intergenic | 60.0% | |
| CACCTCAGCTTGCACTAGCC+TGG | + | chr7.3:77918832-77918851 | MS.gene022151:CDS | 60.0% | |
| CAGGCTAGTGCAAGCTGAGG+TGG | - | chr7.3:77918834-77918853 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 77916684 | 77919073 | 77916684 | ID=MS.gene022151 |
| chr7.3 | mRNA | 77916684 | 77919073 | 77916684 | ID=MS.gene022151.t1;Parent=MS.gene022151 |
| chr7.3 | exon | 77916684 | 77916896 | 77916684 | ID=MS.gene022151.t1.exon1;Parent=MS.gene022151.t1 |
| chr7.3 | CDS | 77916684 | 77916896 | 77916684 | ID=cds.MS.gene022151.t1;Parent=MS.gene022151.t1 |
| chr7.3 | exon | 77917026 | 77917223 | 77917026 | ID=MS.gene022151.t1.exon2;Parent=MS.gene022151.t1 |
| chr7.3 | CDS | 77917026 | 77917223 | 77917026 | ID=cds.MS.gene022151.t1;Parent=MS.gene022151.t1 |
| chr7.3 | exon | 77917418 | 77917605 | 77917418 | ID=MS.gene022151.t1.exon3;Parent=MS.gene022151.t1 |
| chr7.3 | CDS | 77917418 | 77917605 | 77917418 | ID=cds.MS.gene022151.t1;Parent=MS.gene022151.t1 |
| chr7.3 | exon | 77917842 | 77917944 | 77917842 | ID=MS.gene022151.t1.exon4;Parent=MS.gene022151.t1 |
| chr7.3 | CDS | 77917842 | 77917944 | 77917842 | ID=cds.MS.gene022151.t1;Parent=MS.gene022151.t1 |
| chr7.3 | exon | 77918741 | 77919073 | 77918741 | ID=MS.gene022151.t1.exon5;Parent=MS.gene022151.t1 |
| chr7.3 | CDS | 77918741 | 77919073 | 77918741 | ID=cds.MS.gene022151.t1;Parent=MS.gene022151.t1 |
| Gene Sequence |
| Protein sequence |
