Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063563.t1 | XP_003590003.1 | 97.1 | 417 | 8 | 1 | 1 | 413 | 1 | 417 | 1.30E-228 | 802 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063563.t1 | P0A9T4 | 45.0 | 360 | 178 | 7 | 57 | 411 | 1 | 345 | 8.2e-78 | 292.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063563.t1 | G7I4M8 | 97.1 | 417 | 8 | 1 | 1 | 413 | 1 | 417 | 9.5e-229 | 802.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene063563 | 0.802383 | 5.76E-49 | -1.69E-46 |
| MS.gene049369 | MS.gene063563 | 0.80703 | 6.17E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene063563 | 0.85496 | 8.69E-62 | -1.69E-46 |
| MS.gene049491 | MS.gene063563 | 0.826168 | 3.15E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene063563 | 0.829706 | 4.43E-55 | -1.69E-46 |
| MS.gene050076 | MS.gene063563 | 0.806736 | 7.12E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene063563 | 0.821738 | 3.44E-53 | -1.69E-46 |
| MS.gene050432 | MS.gene063563 | 0.81463 | 1.40E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene063563 | 0.802735 | 4.87E-49 | -1.69E-46 |
| MS.gene050767 | MS.gene063563 | 0.847886 | 8.71E-60 | -1.69E-46 |
| MS.gene050770 | MS.gene063563 | 0.853369 | 2.50E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene063563 | 0.811859 | 5.67E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene063563 | 0.816469 | 5.44E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene063563 | 0.804474 | 2.12E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene063563 | 0.813183 | 2.91E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene063563 | 0.841897 | 3.60E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene063563 | 0.810334 | 1.21E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene063563 | 0.815946 | 7.12E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene063563 | 0.805975 | 1.03E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene063563 | 0.81442 | 1.56E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene063563 | 0.848038 | 7.90E-60 | -1.69E-46 |
| MS.gene052271 | MS.gene063563 | 0.820731 | 5.87E-53 | -1.69E-46 |
| MS.gene052290 | MS.gene063563 | 0.816429 | 5.56E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene063563 | 0.869358 | 3.29E-66 | -1.69E-46 |
| MS.gene052326 | MS.gene063563 | 0.804743 | 1.87E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene063563 | 0.806734 | 7.12E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene063563 | 0.843318 | 1.51E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene063563 | 0.803549 | 3.31E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene063563 | 0.807291 | 5.43E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene063563 | 0.830242 | 3.28E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene063563 | 0.82229 | 2.56E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene063563 | 0.804413 | 2.19E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene063563 | 0.83139 | 1.71E-55 | -1.69E-46 |
| MS.gene053104 | MS.gene063563 | 0.830597 | 2.68E-55 | -1.69E-46 |
| MS.gene053322 | MS.gene063563 | 0.839579 | 1.46E-57 | -1.69E-46 |
| MS.gene053384 | MS.gene063563 | 0.917092 | 8.09E-86 | -1.69E-46 |
| MS.gene054123 | MS.gene063563 | 0.815763 | 7.83E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene063563 | 0.845736 | 3.37E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene063563 | 0.806126 | 9.57E-50 | -1.69E-46 |
| MS.gene054802 | MS.gene063563 | 0.802659 | 5.05E-49 | -1.69E-46 |
| MS.gene054803 | MS.gene063563 | 0.808217 | 3.45E-50 | -1.69E-46 |
| MS.gene054804 | MS.gene063563 | 0.805904 | 1.07E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene063563 | 0.817034 | 4.06E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene063563 | 0.817328 | 3.49E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene063563 | 0.820793 | 5.68E-53 | -1.69E-46 |
| MS.gene055254 | MS.gene063563 | 0.801268 | 9.75E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene063563 | 0.818248 | 2.16E-52 | -1.69E-46 |
| MS.gene055397 | MS.gene063563 | 0.856812 | 2.50E-62 | -1.69E-46 |
| MS.gene055412 | MS.gene063563 | 0.840581 | 7.98E-58 | -1.69E-46 |
| MS.gene055636 | MS.gene063563 | 0.825551 | 4.41E-54 | -1.69E-46 |
| MS.gene055638 | MS.gene063563 | 0.803244 | 3.82E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene063563 | 0.832494 | 9.16E-56 | -1.69E-46 |
| MS.gene055722 | MS.gene063563 | 0.808143 | 3.58E-50 | -1.69E-46 |
| MS.gene055896 | MS.gene063563 | 0.815761 | 7.83E-52 | -1.69E-46 |
| MS.gene05592 | MS.gene063563 | 0.834888 | 2.31E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene063563 | 0.803803 | 2.93E-49 | -1.69E-46 |
| MS.gene056410 | MS.gene063563 | 0.806176 | 9.34E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene063563 | 0.817133 | 3.86E-52 | -1.69E-46 |
| MS.gene056549 | MS.gene063563 | 0.801559 | 8.51E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene063563 | 0.887375 | 1.51E-72 | -1.69E-46 |
| MS.gene056719 | MS.gene063563 | 0.812818 | 3.50E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene063563 | 0.820851 | 5.51E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene063563 | 0.846561 | 2.01E-59 | -1.69E-46 |
| MS.gene057123 | MS.gene063563 | 0.804019 | 2.64E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene063563 | 0.84174 | 3.96E-58 | -1.69E-46 |
| MS.gene057146 | MS.gene063563 | 0.817136 | 3.86E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene063563 | 0.806556 | 7.77E-50 | -1.69E-46 |
| MS.gene05735 | MS.gene063563 | 0.812622 | 3.86E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene063563 | 0.825869 | 3.71E-54 | -1.69E-46 |
| MS.gene057775 | MS.gene063563 | 0.804038 | 2.62E-49 | -1.69E-46 |
| MS.gene057927 | MS.gene063563 | 0.818921 | 1.52E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene063563 | 0.810222 | 1.28E-50 | -1.69E-46 |
| MS.gene058082 | MS.gene063563 | 0.806862 | 6.69E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene063563 | 0.829434 | 5.16E-55 | -1.69E-46 |
| MS.gene058660 | MS.gene063563 | 0.835611 | 1.52E-56 | -1.69E-46 |
| MS.gene058928 | MS.gene063563 | 0.818147 | 2.28E-52 | -1.69E-46 |
| MS.gene058993 | MS.gene063563 | 0.804278 | 2.33E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene063563 | 0.814835 | 1.26E-51 | -1.69E-46 |
| MS.gene059326 | MS.gene063563 | 0.821492 | 3.92E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene063563 | 0.813414 | 2.59E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene063563 | 0.835713 | 1.43E-56 | -1.69E-46 |
| MS.gene059597 | MS.gene063563 | 0.838134 | 3.44E-57 | -1.69E-46 |
| MS.gene05959 | MS.gene063563 | 0.838957 | 2.11E-57 | -1.69E-46 |
| MS.gene059676 | MS.gene063563 | 0.868102 | 8.38E-66 | -1.69E-46 |
| MS.gene059688 | MS.gene063563 | 0.816588 | 5.12E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene063563 | 0.817159 | 3.81E-52 | -1.69E-46 |
| MS.gene059695 | MS.gene063563 | 0.819899 | 9.12E-53 | -1.69E-46 |
| MS.gene059708 | MS.gene063563 | 0.829922 | 3.92E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene063563 | 0.83123 | 1.88E-55 | -1.69E-46 |
| MS.gene059894 | MS.gene063563 | 0.818037 | 2.42E-52 | -1.69E-46 |
| MS.gene059960 | MS.gene063563 | 0.876566 | 1.26E-68 | -1.69E-46 |
| MS.gene060804 | MS.gene063563 | 0.852052 | 5.95E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene063563 | 0.884375 | 2.02E-71 | -1.69E-46 |
| MS.gene060981 | MS.gene063563 | 0.812724 | 3.67E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene063563 | 0.847428 | 1.16E-59 | -1.69E-46 |
| MS.gene061051 | MS.gene063563 | -0.831953 | 1.25E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene063563 | 0.857071 | 2.10E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene53676 | MS.gene063563 | PPI |
| MS.gene061628 | MS.gene063563 | PPI |
| MS.gene022151 | MS.gene063563 | PPI |
| MS.gene063563 | MS.gene96904 | PPI |
| MS.gene039628 | MS.gene063563 | PPI |
| MS.gene063563 | MS.gene93616 | PPI |
| MS.gene56146 | MS.gene063563 | PPI |
| MS.gene022153 | MS.gene063563 | PPI |
| MS.gene23854 | MS.gene063563 | PPI |
| MS.gene43134 | MS.gene063563 | PPI |
| MS.gene43136 | MS.gene063563 | PPI |
| MS.gene063563 | MS.gene23855 | PPI |
| MS.gene61079 | MS.gene063563 | PPI |
| MS.gene063563 | MS.gene93729 | PPI |
| MS.gene063563 | MS.gene062500 | PPI |
| MS.gene56144 | MS.gene063563 | PPI |
| MS.gene43133 | MS.gene063563 | PPI |
| MS.gene063563 | MS.gene43135 | PPI |
| MS.gene63929 | MS.gene063563 | PPI |
| MS.gene046213 | MS.gene063563 | PPI |
| MS.gene063563 | MS.gene022150 | PPI |
| MS.gene93602 | MS.gene063563 | PPI |
| MS.gene93600 | MS.gene063563 | PPI |
| MS.gene88462 | MS.gene063563 | PPI |
| MS.gene93623 | MS.gene063563 | PPI |
| MS.gene063563 | MS.gene93601 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063563.t1 | MTR_1g042730 | 97.122 | 417 | 8 | 1 | 1 | 413 | 1 | 417 | 0.0 | 838 |
| MS.gene063563.t1 | MTR_8g088160 | 49.451 | 273 | 125 | 8 | 66 | 331 | 48 | 314 | 3.05e-81 | 253 |
| MS.gene063563.t1 | MTR_4g015040 | 88.679 | 53 | 6 | 0 | 178 | 230 | 21 | 73 | 9.20e-30 | 110 |
| MS.gene063563.t1 | MTR_7g114980 | 30.091 | 329 | 187 | 12 | 62 | 385 | 16 | 306 | 1.53e-27 | 112 |
| MS.gene063563.t1 | MTR_7g114980 | 31.023 | 303 | 166 | 12 | 62 | 359 | 16 | 280 | 2.70e-26 | 107 |
| MS.gene063563.t1 | MTR_1g047250 | 27.824 | 363 | 203 | 11 | 57 | 405 | 1 | 318 | 6.26e-26 | 107 |
| MS.gene063563.t1 | MTR_7g114990 | 27.844 | 334 | 182 | 12 | 62 | 385 | 18 | 302 | 4.38e-25 | 105 |
| MS.gene063563.t1 | MTR_7g021850 | 28.571 | 350 | 196 | 14 | 61 | 403 | 8 | 310 | 5.32e-25 | 105 |
| MS.gene063563.t1 | MTR_7g115010 | 27.666 | 347 | 188 | 12 | 62 | 404 | 14 | 301 | 2.17e-23 | 100 |
| MS.gene063563.t1 | MTR_7g114970 | 27.928 | 333 | 188 | 10 | 61 | 385 | 11 | 299 | 5.94e-23 | 99.4 |
| MS.gene063563.t1 | MTR_7g021680 | 28.000 | 350 | 197 | 15 | 61 | 403 | 8 | 309 | 1.24e-22 | 98.2 |
| MS.gene063563.t1 | MTR_7g021820 | 28.000 | 350 | 197 | 15 | 61 | 403 | 8 | 309 | 1.24e-22 | 98.2 |
| MS.gene063563.t1 | MTR_7g114970 | 28.339 | 307 | 168 | 10 | 61 | 359 | 11 | 273 | 5.01e-21 | 92.8 |
| MS.gene063563.t1 | MTR_7g114970 | 28.339 | 307 | 168 | 10 | 61 | 359 | 11 | 273 | 5.58e-21 | 92.8 |
| MS.gene063563.t1 | MTR_1g102750 | 25.826 | 333 | 195 | 14 | 61 | 385 | 9 | 297 | 2.52e-19 | 89.0 |
| MS.gene063563.t1 | MTR_1g102750 | 26.710 | 307 | 173 | 14 | 61 | 359 | 9 | 271 | 7.80e-19 | 87.0 |
| MS.gene063563.t1 | MTR_3g449790 | 24.925 | 333 | 197 | 10 | 61 | 380 | 39 | 331 | 1.86e-18 | 86.7 |
| MS.gene063563.t1 | MTR_3g092140 | 26.316 | 285 | 151 | 10 | 48 | 305 | 10 | 262 | 1.63e-17 | 84.7 |
| MS.gene063563.t1 | MTR_3g449790 | 24.625 | 333 | 192 | 10 | 61 | 380 | 39 | 325 | 9.40e-17 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063563.t1 | AT1G04420 | 75.781 | 384 | 90 | 1 | 33 | 413 | 29 | 412 | 0.0 | 623 |
| MS.gene063563.t1 | AT1G04690 | 28.916 | 332 | 198 | 8 | 57 | 384 | 1 | 298 | 1.62e-28 | 114 |
| MS.gene063563.t1 | AT1G60690 | 29.143 | 350 | 194 | 13 | 61 | 403 | 11 | 313 | 8.04e-25 | 104 |
| MS.gene063563.t1 | AT1G60710 | 29.513 | 349 | 194 | 14 | 61 | 403 | 11 | 313 | 9.68e-25 | 104 |
| MS.gene063563.t1 | AT1G60680 | 28.107 | 338 | 193 | 11 | 61 | 391 | 11 | 305 | 7.68e-24 | 102 |
| MS.gene063563.t1 | AT1G10810 | 27.507 | 349 | 201 | 12 | 61 | 403 | 11 | 313 | 1.10e-21 | 95.9 |
| MS.gene063563.t1 | AT1G60750 | 28.286 | 350 | 181 | 13 | 61 | 403 | 12 | 298 | 2.75e-21 | 94.4 |
| MS.gene063563.t1 | AT1G60730 | 27.714 | 350 | 199 | 14 | 61 | 403 | 11 | 313 | 4.72e-21 | 94.0 |
| MS.gene063563.t1 | AT1G60730 | 27.762 | 353 | 215 | 14 | 61 | 403 | 11 | 333 | 1.52e-20 | 92.8 |
| MS.gene063563.t1 | AT5G53580 | 27.507 | 349 | 184 | 16 | 56 | 385 | 36 | 334 | 2.26e-18 | 86.3 |
| MS.gene063563.t1 | AT1G10810 | 29.249 | 253 | 134 | 10 | 61 | 307 | 11 | 224 | 9.36e-18 | 82.8 |
| MS.gene063563.t1 | AT1G60680 | 28.862 | 246 | 133 | 9 | 61 | 302 | 11 | 218 | 7.00e-17 | 80.1 |
| MS.gene063563.t1 | AT1G10810 | 27.076 | 277 | 161 | 9 | 129 | 403 | 24 | 261 | 4.71e-16 | 78.6 |
| MS.gene063563.t1 | AT4G33670 | 24.791 | 359 | 211 | 13 | 57 | 409 | 4 | 309 | 2.70e-13 | 70.9 |
Find 85 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGTGTCTCTTTCTTCAT+TGG | 0.197248 | 1.1:+25095503 | None:intergenic |
| GGTCAGAGTCACCAAGTTTC+CGG | 0.264198 | 1.1:+25097417 | None:intergenic |
| CAAGCAAGCTATAGCTGTTC+TGG | 0.272185 | 1.1:+25094096 | None:intergenic |
| TTCTGGATACTGACAATCTT+TGG | 0.280723 | 1.1:+25094113 | None:intergenic |
| GTCTCTTTCTTCATTGGAAT+CGG | 0.294986 | 1.1:+25095509 | None:intergenic |
| AAGCCAATGTTGCAATTCTT+TGG | 0.310094 | 1.1:+25093259 | None:intergenic |
| GATCGCTACGTTGCATTGTT+TGG | 0.310293 | 1.1:-25094679 | MS.gene063563:CDS |
| GAGTGATTTCACTGATATTA+AGG | 0.318627 | 1.1:+25097396 | None:intergenic |
| AGGAGTTAAACCATGTTTCT+TGG | 0.319091 | 1.1:+25092814 | None:intergenic |
| CAATGTTTCAGATGACGTTT+GGG | 0.330727 | 1.1:-25096344 | MS.gene063563:intron |
| CTCAATTATGCATTTGAGAA+TGG | 0.362815 | 1.1:-25096288 | MS.gene063563:CDS |
| ATTCCTATGATCCTTCAAAA+TGG | 0.370091 | 1.1:-25094651 | MS.gene063563:CDS |
| AATCCAAGCGCGAGCTGAAC+AGG | 0.376331 | 1.1:+25092794 | None:intergenic |
| TTCTTACCCGTGAAAGTGAT+TGG | 0.390126 | 1.1:+25093119 | None:intergenic |
| TGTGAGAGATCGTCCATTCA+TGG | 0.397619 | 1.1:-25092771 | MS.gene063563:CDS |
| GCAATGTTTCAGATGACGTT+TGG | 0.398844 | 1.1:-25096345 | MS.gene063563:intron |
| TTTCAAGAACTTATCAATGA+AGG | 0.411788 | 1.1:-25094592 | MS.gene063563:CDS |
| CTAGGCGGCGGAACACTCTC+TGG | 0.422546 | 1.1:-25093220 | MS.gene063563:CDS |
| ATAATTGAACTCGCCATGAA+TGG | 0.430321 | 1.1:+25092758 | None:intergenic |
| ACTCCTGTTCAGCTCGCGCT+TGG | 0.430695 | 1.1:-25092797 | MS.gene063563:CDS |
| TTGATTTGTTGCAAATTCAT+TGG | 0.436665 | 1.1:-25095011 | MS.gene063563:intron |
| CCATTGCAGTACCGGAAACT+TGG | 0.436754 | 1.1:-25097428 | MS.gene063563:CDS |
| AGAAAAGCCTTAAGCGTCTT+GGG | 0.437982 | 1.1:-25095044 | MS.gene063563:CDS |
| GTTTCAAATGAGACTTCATA+TGG | 0.438985 | 1.1:-25094176 | MS.gene063563:CDS |
| TTCATGGCGAGTTCAATTAT+CGG | 0.446341 | 1.1:-25092755 | MS.gene063563:CDS |
| TCTCTTTCTTCATTGGAATC+GGG | 0.450697 | 1.1:+25095510 | None:intergenic |
| ATCATAGCAACAAAAGTTTG+CGG | 0.453007 | 1.1:-25095147 | MS.gene063563:CDS |
| CATCCAAAGAATTGCAACAT+TGG | 0.453546 | 1.1:-25093262 | MS.gene063563:CDS |
| CAATGTTGCAATTCTTTGGA+TGG | 0.454759 | 1.1:+25093263 | None:intergenic |
| ATTCCTGTCATGACTTCTGC+TGG | 0.463780 | 1.1:+25092668 | None:intergenic |
| AATCAATCCCAAGACGCTTA+AGG | 0.464110 | 1.1:+25095037 | None:intergenic |
| GAATCTCTTCCCTGGCTACA+TGG | 0.467731 | 1.1:-25093152 | MS.gene063563:CDS |
| GATATAACCAATCACTTTCA+CGG | 0.468306 | 1.1:-25093126 | MS.gene063563:CDS |
| AACAATGCAACGTAGCGATC+TGG | 0.476923 | 1.1:+25094682 | None:intergenic |
| TTATATCTTTCCATGTAGCC+AGG | 0.480910 | 1.1:+25093142 | None:intergenic |
| TCAACAATCCATTGCAGTAC+CGG | 0.485809 | 1.1:-25097436 | MS.gene063563:CDS |
| AGAGTGTTCCGCCGCCTAGT+GGG | 0.496927 | 1.1:+25093224 | None:intergenic |
| CTGATCTCTATATTGCTAGC+TGG | 0.498461 | 1.1:-25095475 | MS.gene063563:CDS |
| GAGAAAAGCCTTAAGCGTCT+TGG | 0.499990 | 1.1:-25095045 | MS.gene063563:CDS |
| AATATCAGTGAAATCACTCT+TGG | 0.502115 | 1.1:-25097392 | MS.gene063563:CDS |
| TGTTCAACAAACGGCACACT+AGG | 0.510409 | 1.1:+25094625 | None:intergenic |
| CTTGAGTTGGCCAAGAAACA+TGG | 0.517065 | 1.1:-25092824 | MS.gene063563:CDS |
| CCAAGTTTCCGGTACTGCAA+TGG | 0.518284 | 1.1:+25097428 | None:intergenic |
| GTCATGACTTCTGCTGGTAA+AGG | 0.518717 | 1.1:+25092674 | None:intergenic |
| TCCGCCGCCTAGTGGGGAAT+AGG | 0.518898 | 1.1:+25093231 | None:intergenic |
| GTCCATGCAGCTAAAGTTGA+GGG | 0.519118 | 1.1:-25094140 | MS.gene063563:CDS |
| TATAGTCTTTAAAGGATGCT+AGG | 0.527210 | 1.1:+25092617 | None:intergenic |
| AACTATTAAGTATCTTGAGT+TGG | 0.528848 | 1.1:-25092837 | MS.gene063563:CDS |
| GAGAGTGTTCCGCCGCCTAG+TGG | 0.531448 | 1.1:+25093223 | None:intergenic |
| GCTTGCAACTGTTCAACAAA+CGG | 0.537666 | 1.1:+25094616 | None:intergenic |
| GTACTGCAATGGATTGTTGA+TGG | 0.539963 | 1.1:+25097439 | None:intergenic |
| GTCCCTCAACTTTAGCTGCA+TGG | 0.544863 | 1.1:+25094138 | None:intergenic |
| TGAGACTTCATATGGGGTGA+TGG | 0.550845 | 1.1:-25094168 | MS.gene063563:CDS |
| TTTCAAATGAGACTTCATAT+GGG | 0.551244 | 1.1:-25094175 | MS.gene063563:CDS |
| TCCTATTCCCCACTAGGCGG+CGG | 0.552022 | 1.1:-25093232 | MS.gene063563:CDS |
| AGCTGCTAAGAAGCCATGGC+CGG | 0.553641 | 1.1:-25097608 | None:intergenic |
| ATATAACCAATCACTTTCAC+GGG | 0.562310 | 1.1:-25093125 | MS.gene063563:intron |
| AGAACTTATCAATGAAGGAA+AGG | 0.566138 | 1.1:-25094587 | MS.gene063563:intron |
| TTGCTATCCTATTCCCCACT+AGG | 0.566323 | 1.1:-25093238 | MS.gene063563:CDS |
| GGAAGACTGAATCTCTTCCC+TGG | 0.567807 | 1.1:-25093160 | MS.gene063563:CDS |
| ATGCATCAGGTACGTTACAT+AGG | 0.569919 | 1.1:-25094200 | MS.gene063563:intron |
| TGGTGTGAGAGAATGAGAAA+TGG | 0.573879 | 1.1:+25097556 | None:intergenic |
| CGTCCATGCAGCTAAAGTTG+AGG | 0.578730 | 1.1:-25094141 | MS.gene063563:CDS |
| TATATCTTTCCATGTAGCCA+GGG | 0.587281 | 1.1:+25093143 | None:intergenic |
| GAAAGAGCAGACACCGGCCA+TGG | 0.588039 | 1.1:+25097595 | None:intergenic |
| AATTATCGGTGCAACATCTG+TGG | 0.606607 | 1.1:-25092741 | MS.gene063563:CDS |
| TTACCAGCAGAAGTCATGAC+AGG | 0.613222 | 1.1:-25092671 | MS.gene063563:CDS |
| AGAGGAGAAAGAGCAGACAC+CGG | 0.613819 | 1.1:+25097589 | None:intergenic |
| GAAGAAGATGCATTCTGAGG+AGG | 0.616503 | 1.1:-25097493 | MS.gene063563:CDS |
| GAGTGTTCCGCCGCCTAGTG+GGG | 0.617674 | 1.1:+25093225 | None:intergenic |
| AGAAATGGCAACAACGTCAG+AGG | 0.619163 | 1.1:+25097571 | None:intergenic |
| GACGTTTGGGGAGCAAAACA+CGG | 0.625843 | 1.1:-25096331 | MS.gene063563:CDS |
| GTAGAAGAAGATGCATTCTG+AGG | 0.626526 | 1.1:-25097496 | MS.gene063563:CDS |
| GGCAAATATCAAAGAAAGTG+TGG | 0.631997 | 1.1:-25095067 | MS.gene063563:CDS |
| TTCAAATGAGACTTCATATG+GGG | 0.645850 | 1.1:-25094174 | MS.gene063563:CDS |
| TTGATGGCGGCACAAACAAG+AGG | 0.649025 | 1.1:+25097455 | None:intergenic |
| CCTATGATCCTTCAAAATGG+CGG | 0.666502 | 1.1:-25094648 | MS.gene063563:CDS |
| GAAGTCTCAATCTCGTGACA+AGG | 0.666696 | 1.1:-25095450 | MS.gene063563:intron |
| CCAATGAAGAAAGAGACACA+AGG | 0.681685 | 1.1:-25095503 | MS.gene063563:CDS |
| TAATGCTCTTGATACTGCTG+AGG | 0.693085 | 1.1:-25096262 | MS.gene063563:CDS |
| TGAGGAGGACGAGAACTGTG+AGG | 0.701626 | 1.1:-25097478 | MS.gene063563:CDS |
| AATGTTTCAGATGACGTTTG+GGG | 0.705815 | 1.1:-25096343 | MS.gene063563:intron |
| CTGCAATGGATTGTTGATGG+CGG | 0.723159 | 1.1:+25097442 | None:intergenic |
| CTATCCTATTCCCCACTAGG+CGG | 0.752007 | 1.1:-25093235 | MS.gene063563:CDS |
| GTGTTGTTGAGAGACAGTGA+TGG | 0.758761 | 1.1:+25097536 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTAATGTTCTTTTT+AGG | - | chr1.1:25094824-25094843 | MS.gene063563:intron | 10.0% |
| !! | AACCTATACATTTATATAAA+AGG | + | chr1.1:25093764-25093783 | None:intergenic | 15.0% |
| !! | AATAAAGGAAAATTCTTAAT+TGG | + | chr1.1:25097336-25097355 | None:intergenic | 15.0% |
| !! | ACCTATACATTTATATAAAA+GGG | + | chr1.1:25093763-25093782 | None:intergenic | 15.0% |
| !! | AGGAAAAAAAACATAAAAAT+CGG | + | chr1.1:25094510-25094529 | None:intergenic | 15.0% |
| !!! | AATGTAATACTTTTAAAACT+TGG | + | chr1.1:25096320-25096339 | None:intergenic | 15.0% |
| !!! | AATGTGATTTTTATTGTATT+AGG | - | chr1.1:25095414-25095433 | MS.gene063563:intron | 15.0% |
| !!! | ATGTAATACTTTTAAAACTT+GGG | + | chr1.1:25096319-25096338 | None:intergenic | 15.0% |
| !!! | ATTTTATTTGTTACTTTCAT+TGG | - | chr1.1:25095268-25095287 | MS.gene063563:intron | 15.0% |
| !!! | TATTTTTGCAAATTTCTTAA+TGG | + | chr1.1:25096832-25096851 | None:intergenic | 15.0% |
| !!! | TTCTTTGAAATTGTTATTAA+GGG | - | chr1.1:25093703-25093722 | MS.gene063563:intron | 15.0% |
| !!! | TTTCTTTGAAATTGTTATTA+AGG | - | chr1.1:25093702-25093721 | MS.gene063563:intron | 15.0% |
| !! | AACCAAACATGAAAAAATAA+AGG | + | chr1.1:25097351-25097370 | None:intergenic | 20.0% |
| !! | AATTGATTATACTTGAAACT+AGG | + | chr1.1:25093147-25093166 | None:intergenic | 20.0% |
| !! | CAATATATTAAAAGTTCCAT+AGG | + | chr1.1:25094850-25094869 | None:intergenic | 20.0% |
| !! | CTAGACATAAGTTTATAAAT+GGG | + | chr1.1:25093525-25093544 | None:intergenic | 20.0% |
| !! | TAGACATAAGTTTATAAATG+GGG | + | chr1.1:25093524-25093543 | None:intergenic | 20.0% |
| !!! | AAAATTGATTTCAACATGTT+TGG | + | chr1.1:25093202-25093221 | None:intergenic | 20.0% |
| !!! | AATCTGAAACAAATTATGAT+TGG | + | chr1.1:25094218-25094237 | None:intergenic | 20.0% |
| !!! | AATTTTGTGATTAGATGTAA+TGG | - | chr1.1:25094100-25094119 | MS.gene063563:CDS | 20.0% |
| !!! | ATCTGAAACAAATTATGATT+GGG | + | chr1.1:25094217-25094236 | None:intergenic | 20.0% |
| !!! | TCCCTTTTATATAAATGTAT+AGG | - | chr1.1:25093759-25093778 | MS.gene063563:intron | 20.0% |
| !!! | TGTAATACTTTTAAAACTTG+GGG | + | chr1.1:25096318-25096337 | None:intergenic | 20.0% |
| !!! | TGTTAAATTTTTTGTGAATG+AGG | - | chr1.1:25094242-25094261 | MS.gene063563:intron | 20.0% |
| !!! | TTCCTTTATTTTTTCATGTT+TGG | - | chr1.1:25097346-25097365 | MS.gene063563:intron | 20.0% |
| ! | AACACGAATCATATACTATA+AGG | + | chr1.1:25096257-25096276 | None:intergenic | 25.0% |
| ! | AACCATACACTAAAAGTTTA+CGG | + | chr1.1:25096696-25096715 | None:intergenic | 25.0% |
| ! | AACTATTAAGTATCTTGAGT+TGG | - | chr1.1:25097381-25097400 | MS.gene063563:intron | 25.0% |
| ! | ACAAATGATTACAGATAACA+TGG | - | chr1.1:25096450-25096469 | MS.gene063563:intron | 25.0% |
| ! | CCATTTATAAACTTATGTCT+AGG | - | chr1.1:25093523-25093542 | MS.gene063563:intron | 25.0% |
| ! | CCTAGACATAAGTTTATAAA+TGG | + | chr1.1:25093526-25093545 | None:intergenic | 25.0% |
| ! | TAGAAAAGATAAAGCATGTT+AGG | + | chr1.1:25095666-25095685 | None:intergenic | 25.0% |
| ! | TAGAGAGTCCAAAATAAAAA+AGG | - | chr1.1:25096348-25096367 | MS.gene063563:intron | 25.0% |
| ! | TAGATTGCAAGAATAGAATT+AGG | + | chr1.1:25094554-25094573 | None:intergenic | 25.0% |
| ! | TGAAATTCAAGTATTTCGAT+TGG | - | chr1.1:25094053-25094072 | MS.gene063563:intron | 25.0% |
| ! | TGAGTTTCTTTATCTTACAA+GGG | - | chr1.1:25096531-25096550 | MS.gene063563:intron | 25.0% |
| ! | TTACTATTAGTACAGATTGA+AGG | + | chr1.1:25095810-25095829 | None:intergenic | 25.0% |
| ! | TTATAATAACCAAACTGAAC+TGG | + | chr1.1:25097271-25097290 | None:intergenic | 25.0% |
| ! | TTGAGTTTCTTTATCTTACA+AGG | - | chr1.1:25096530-25096549 | MS.gene063563:intron | 25.0% |
| ! | TTTCAAATGAGACTTCATAT+GGG | - | chr1.1:25096043-25096062 | MS.gene063563:intron | 25.0% |
| ! | TTTCAAGAACTTATCAATGA+AGG | - | chr1.1:25095626-25095645 | MS.gene063563:intron | 25.0% |
| !! | GTTTCAAGTATAATCAATTC+TGG | - | chr1.1:25093148-25093167 | MS.gene063563:CDS | 25.0% |
| !! | TGATTTTCTGCTTTCATTAT+AGG | - | chr1.1:25095513-25095532 | MS.gene063563:CDS | 25.0% |
| !!! | TAATTCGGTTTTGAAAAAGA+CGG | + | chr1.1:25097156-25097175 | None:intergenic | 25.0% |
| !!! | TTATTTGTTACTTTCATTGG+TGG | - | chr1.1:25095271-25095290 | MS.gene063563:intron | 25.0% |
| !!! | TTGATTTGTTGCAAATTCAT+TGG | - | chr1.1:25095207-25095226 | MS.gene063563:intron | 25.0% |
| !!! | TTTTTTATTTTGGACTCTCT+AGG | + | chr1.1:25096349-25096368 | None:intergenic | 25.0% |
| !!! | TTTTTTCATGTTTGGTTTTC+AGG | - | chr1.1:25097354-25097373 | MS.gene063563:intron | 25.0% |
| AAACAGACTAATAAACTCGA+GGG | + | chr1.1:25094143-25094162 | None:intergenic | 30.0% | |
| AACATAAAAATCGGTCACAT+AGG | + | chr1.1:25094501-25094520 | None:intergenic | 30.0% | |
| AATATCAGTGAAATCACTCT+TGG | - | chr1.1:25092826-25092845 | MS.gene063563:CDS | 30.0% | |
| AGAACTTATCAATGAAGGAA+AGG | - | chr1.1:25095631-25095650 | MS.gene063563:intron | 30.0% | |
| AGATAAAGCATGTTAGGAAT+AGG | + | chr1.1:25095660-25095679 | None:intergenic | 30.0% | |
| AGGTATCAAAACATGAACTT+TGG | - | chr1.1:25094903-25094922 | MS.gene063563:intron | 30.0% | |
| ATATAACCAATCACTTTCAC+GGG | - | chr1.1:25097093-25097112 | MS.gene063563:intron | 30.0% | |
| ATCACTTAATTCTGTATTGC+TGG | - | chr1.1:25096207-25096226 | MS.gene063563:intron | 30.0% | |
| ATCATAGCAACAAAAGTTTG+CGG | - | chr1.1:25095071-25095090 | MS.gene063563:CDS | 30.0% | |
| ATGATAATCTATGCACAAAG+AGG | + | chr1.1:25095056-25095075 | None:intergenic | 30.0% | |
| ATTCCTATGATCCTTCAAAA+TGG | - | chr1.1:25095567-25095586 | MS.gene063563:intron | 30.0% | |
| ATTGGTTATCTTGTTAACCA+TGG | + | chr1.1:25097318-25097337 | None:intergenic | 30.0% | |
| CAAGAGAGAATAAATCACTT+AGG | + | chr1.1:25094530-25094549 | None:intergenic | 30.0% | |
| CAGTTTGGTTATTATAACAC+TGG | - | chr1.1:25097274-25097293 | MS.gene063563:intron | 30.0% | |
| CATTTCCAACATTATAGAAG+TGG | + | chr1.1:25094437-25094456 | None:intergenic | 30.0% | |
| CTCAATTATGCATTTGAGAA+TGG | - | chr1.1:25093930-25093949 | MS.gene063563:intron | 30.0% | |
| CTTTACTTTCAACTCACTTT+CGG | + | chr1.1:25093038-25093057 | None:intergenic | 30.0% | |
| GAGTGATTTCACTGATATTA+AGG | + | chr1.1:25092825-25092844 | None:intergenic | 30.0% | |
| GATATAACCAATCACTTTCA+CGG | - | chr1.1:25097092-25097111 | MS.gene063563:intron | 30.0% | |
| GATCATATTCATATGCACTT+TGG | - | chr1.1:25096640-25096659 | MS.gene063563:intron | 30.0% | |
| GATTACAGATAACATGGTTT+AGG | - | chr1.1:25096456-25096475 | MS.gene063563:intron | 30.0% | |
| GTAAAAATGAGATAGAACGA+AGG | + | chr1.1:25094013-25094032 | None:intergenic | 30.0% | |
| GTATTATAACCTCAACTCAA+GGG | - | chr1.1:25094289-25094308 | MS.gene063563:intron | 30.0% | |
| GTTTCAAATGAGACTTCATA+TGG | - | chr1.1:25096042-25096061 | MS.gene063563:intron | 30.0% | |
| TAAAAGTTTACGGATCACAT+TGG | + | chr1.1:25096686-25096705 | None:intergenic | 30.0% | |
| TCAAACCAAAGATATGAAAG+CGG | + | chr1.1:25094385-25094404 | None:intergenic | 30.0% | |
| TCATATACTATAAGGACAAC+AGG | + | chr1.1:25096249-25096268 | None:intergenic | 30.0% | |
| TCTCACAATCAGCAATTTAT+AGG | - | chr1.1:25096555-25096574 | MS.gene063563:intron | 30.0% | |
| TGACTTAGTAGGATAATGTT+TGG | - | chr1.1:25095300-25095319 | MS.gene063563:intron | 30.0% | |
| TGATAATCTATGCACAAAGA+GGG | + | chr1.1:25095055-25095074 | None:intergenic | 30.0% | |
| TTAGACAAGTTAGACTCAAT+AGG | + | chr1.1:25092947-25092966 | None:intergenic | 30.0% | |
| TTATTTGAGCAGTTCAATTG+CGG | + | chr1.1:25097239-25097258 | None:intergenic | 30.0% | |
| TTCAAATGAGACTTCATATG+GGG | - | chr1.1:25096044-25096063 | MS.gene063563:intron | 30.0% | |
| TTCAATGACTTTAAACCACT+CGG | - | chr1.1:25097207-25097226 | MS.gene063563:intron | 30.0% | |
| TTGAAGTACATTTAACGACA+AGG | - | chr1.1:25094883-25094902 | MS.gene063563:intron | 30.0% | |
| TTTCACTAGTTAATCCCATA+TGG | + | chr1.1:25094644-25094663 | None:intergenic | 30.0% | |
| ! | ACACCTCCAGAATTAATTTT+GGG | - | chr1.1:25093222-25093241 | MS.gene063563:CDS | 30.0% |
| ! | AGTTTTACTCTGACTTCAAT+TGG | - | chr1.1:25093397-25093416 | MS.gene063563:intron | 30.0% |
| ! | ATCCGTAAACTTTTAGTGTA+TGG | - | chr1.1:25096691-25096710 | MS.gene063563:intron | 30.0% |
| ! | ATGCTTTTACAACAACTGAA+CGG | - | chr1.1:25097521-25097540 | MS.gene063563:CDS | 30.0% |
| ! | CATCAATGTCTTCTTTTAGT+TGG | + | chr1.1:25097504-25097523 | None:intergenic | 30.0% |
| ! | GTTTTACTCTGACTTCAATT+GGG | - | chr1.1:25093398-25093417 | MS.gene063563:intron | 30.0% |
| ! | TACACCTCCAGAATTAATTT+TGG | - | chr1.1:25093221-25093240 | MS.gene063563:CDS | 30.0% |
| !! | AATTCTAAAGCTGCAAAAAG+TGG | - | chr1.1:25097037-25097056 | MS.gene063563:intron | 30.0% |
| !! | TAATGTTCTTTTTAGGCCTA+TGG | - | chr1.1:25094831-25094850 | MS.gene063563:intron | 30.0% |
| !! | TTAGTGCATGTTTTGTTCTA+TGG | - | chr1.1:25092968-25092987 | MS.gene063563:intron | 30.0% |
| !! | TTTGTATTTTTGCATGCATC+AGG | - | chr1.1:25096005-25096024 | MS.gene063563:intron | 30.0% |
| !!! | CAGGAAAGCCTTTTTTATTT+TGG | + | chr1.1:25096359-25096378 | None:intergenic | 30.0% |
| !!! | CATGCTGGTTTTTTGTTTTA+AGG | + | chr1.1:25093283-25093302 | None:intergenic | 30.0% |
| !!! | TTGGACGTTTTTGAAGTTTA+AGG | + | chr1.1:25096667-25096686 | None:intergenic | 30.0% |
| AAGCCAATGTTGCAATTCTT+TGG | + | chr1.1:25096962-25096981 | None:intergenic | 35.0% | |
| AATAACCAAACTGAACTGGA+TGG | + | chr1.1:25097267-25097286 | None:intergenic | 35.0% | |
| AATGTTTCAGATGACGTTTG+GGG | - | chr1.1:25093875-25093894 | MS.gene063563:intron | 35.0% | |
| ACACTTTGCTACATATAACG+AGG | - | chr1.1:25094927-25094946 | MS.gene063563:intron | 35.0% | |
| AGCTTCTTCATGTTCTTAGT+TGG | - | chr1.1:25096897-25096916 | MS.gene063563:intron | 35.0% | |
| AGGAGTTAAACCATGTTTCT+TGG | + | chr1.1:25097407-25097426 | None:intergenic | 35.0% | |
| AGGTCAATCTCATTCAATGT+GGG | - | chr1.1:25093543-25093562 | MS.gene063563:intron | 35.0% | |
| AGTTTATGCTAATTGACGTG+TGG | + | chr1.1:25095948-25095967 | None:intergenic | 35.0% | |
| ATAATTGAACTCGCCATGAA+TGG | + | chr1.1:25097463-25097482 | None:intergenic | 35.0% | |
| ATATGAAAGCGGCAATAATG+AGG | + | chr1.1:25094374-25094393 | None:intergenic | 35.0% | |
| CAATGTTGCAATTCTTTGGA+TGG | + | chr1.1:25096958-25096977 | None:intergenic | 35.0% | |
| CAATGTTTCAGATGACGTTT+GGG | - | chr1.1:25093874-25093893 | MS.gene063563:intron | 35.0% | |
| CATCCAAAGAATTGCAACAT+TGG | - | chr1.1:25096956-25096975 | MS.gene063563:intron | 35.0% | |
| CCAAGTATTCAAAGATCTAC+AGG | + | chr1.1:25096378-25096397 | None:intergenic | 35.0% | |
| CCTGTAGATCTTTGAATACT+TGG | - | chr1.1:25096375-25096394 | MS.gene063563:intron | 35.0% | |
| GAAACAGACTAATAAACTCG+AGG | + | chr1.1:25094144-25094163 | None:intergenic | 35.0% | |
| GAATATGATCCCAAGTTTGA+AGG | + | chr1.1:25096630-25096649 | None:intergenic | 35.0% | |
| GGCAAATATCAAAGAAAGTG+TGG | - | chr1.1:25095151-25095170 | MS.gene063563:CDS | 35.0% | |
| GGTATTATAACCTCAACTCA+AGG | - | chr1.1:25094288-25094307 | MS.gene063563:intron | 35.0% | |
| GTCTCTTTCTTCATTGGAAT+CGG | + | chr1.1:25094712-25094731 | None:intergenic | 35.0% | |
| GTGCTAACAATTCCTTTGTT+GGG | - | chr1.1:25093361-25093380 | MS.gene063563:intron | 35.0% | |
| GTTCAAAAACAAGTTTAGCC+TGG | + | chr1.1:25095469-25095488 | None:intergenic | 35.0% | |
| TAGGTCAATCTCATTCAATG+TGG | - | chr1.1:25093542-25093561 | MS.gene063563:intron | 35.0% | |
| TATATCTTTCCATGTAGCCA+GGG | + | chr1.1:25097078-25097097 | None:intergenic | 35.0% | |
| TCACAGACTTATGAATCACA+AGG | + | chr1.1:25095904-25095923 | None:intergenic | 35.0% | |
| TCACATACACATGTACAAGA+AGG | + | chr1.1:25095976-25095995 | None:intergenic | 35.0% | |
| TCACTGTGATGATTTACGTA+CGG | - | chr1.1:25093827-25093846 | MS.gene063563:intron | 35.0% | |
| TCTCTTTCTTCATTGGAATC+GGG | + | chr1.1:25094711-25094730 | None:intergenic | 35.0% | |
| TTATATCTTTCCATGTAGCC+AGG | + | chr1.1:25097079-25097098 | None:intergenic | 35.0% | |
| TTCATGGCGAGTTCAATTAT+CGG | - | chr1.1:25097463-25097482 | MS.gene063563:CDS | 35.0% | |
| TTCTGGATACTGACAATCTT+TGG | + | chr1.1:25096108-25096127 | None:intergenic | 35.0% | |
| ! | AGAAATAGTGATGATGAACC+AGG | - | chr1.1:25095448-25095467 | MS.gene063563:intron | 35.0% |
| ! | AGCAAATACAAAGTACTCCT+CGG | + | chr1.1:25095738-25095757 | None:intergenic | 35.0% |
| ! | CAAATCTCAATCTAGCTTCA+GGG | + | chr1.1:25094963-25094982 | None:intergenic | 35.0% |
| ! | GTGTGTTTTACATGCCATAT+GGG | - | chr1.1:25094627-25094646 | MS.gene063563:CDS | 35.0% |
| ! | GTTAACCATGGTTTAGAGTA+TGG | + | chr1.1:25097306-25097325 | None:intergenic | 35.0% |
| ! | TGTGTGTTTTACATGCCATA+TGG | - | chr1.1:25094626-25094645 | MS.gene063563:CDS | 35.0% |
| ! | TGTTGCTGTTGTTGTTGTAT+CGG | - | chr1.1:25095324-25095343 | MS.gene063563:intron | 35.0% |
| !! | CTTGTAAGAAGTCGTTTTGA+AGG | - | chr1.1:25096141-25096160 | MS.gene063563:intron | 35.0% |
| !! | TATTGCCGCTTTCATATCTT+TGG | - | chr1.1:25094377-25094396 | MS.gene063563:intron | 35.0% |
| !! | TGTTTTGTTCCACTTCTAGA+GGG | + | chr1.1:25093248-25093267 | None:intergenic | 35.0% |
| !! | TTGTTTTGTTCCACTTCTAG+AGG | + | chr1.1:25093249-25093268 | None:intergenic | 35.0% |
| !!! | TTTAGGATTTTAGTTGCCAG+AGG | - | chr1.1:25096473-25096492 | MS.gene063563:intron | 35.0% |
| AAAAAACCAGCATGTAACCC+AGG | - | chr1.1:25093289-25093308 | MS.gene063563:intron | 40.0% | |
| AAAAACCAGCATGTAACCCA+GGG | - | chr1.1:25093290-25093309 | MS.gene063563:intron | 40.0% | |
| AAAGGAATTGTTAGCACCTG+GGG | + | chr1.1:25093358-25093377 | None:intergenic | 40.0% | |
| AAGTGGCGAGAATGATACAT+AGG | + | chr1.1:25094420-25094439 | None:intergenic | 40.0% | |
| AATCAATCCCAAGACGCTTA+AGG | + | chr1.1:25095184-25095203 | None:intergenic | 40.0% | |
| AATTATCGGTGCAACATCTG+TGG | - | chr1.1:25097477-25097496 | MS.gene063563:CDS | 40.0% | |
| AATTGTGTGCAGGGATAACT+TGG | + | chr1.1:25094593-25094612 | None:intergenic | 40.0% | |
| AATTTACCCCACTCCAAGTT+AGG | + | chr1.1:25096800-25096819 | None:intergenic | 40.0% | |
| ACAAAGGAATTGTTAGCACC+TGG | + | chr1.1:25093360-25093379 | None:intergenic | 40.0% | |
| AGAAAAGCCTTAAGCGTCTT+GGG | - | chr1.1:25095174-25095193 | MS.gene063563:intron | 40.0% | |
| AGAGGGCCCAAAATTAATTC+TGG | + | chr1.1:25093231-25093250 | None:intergenic | 40.0% | |
| AGATTGCAAGAATTGTGTGC+AGG | + | chr1.1:25094603-25094622 | None:intergenic | 40.0% | |
| ATGCATCAGGTACGTTACAT+AGG | - | chr1.1:25096018-25096037 | MS.gene063563:intron | 40.0% | |
| ATGGAGTTCAAATCTCCTTC+GGG | - | chr1.1:25094312-25094331 | MS.gene063563:intron | 40.0% | |
| ATTTACCCCACTCCAAGTTA+GGG | + | chr1.1:25096799-25096818 | None:intergenic | 40.0% | |
| CAAAGGAATTGTTAGCACCT+GGG | + | chr1.1:25093359-25093378 | None:intergenic | 40.0% | |
| CCAATGAAGAAAGAGACACA+AGG | - | chr1.1:25094715-25094734 | MS.gene063563:intron | 40.0% | |
| CCTATGATCCTTCAAAATGG+CGG | - | chr1.1:25095570-25095589 | MS.gene063563:intron | 40.0% | |
| CCTGAAGCTAGATTGAGATT+TGG | - | chr1.1:25094961-25094980 | MS.gene063563:intron | 40.0% | |
| CCTTGTGTCTCTTTCTTCAT+TGG | + | chr1.1:25094718-25094737 | None:intergenic | 40.0% | |
| CTGATCTCTATATTGCTAGC+TGG | - | chr1.1:25094743-25094762 | MS.gene063563:intron | 40.0% | |
| GATATGCAAGCTTCACTCTT+TGG | - | chr1.1:25094180-25094199 | MS.gene063563:CDS | 40.0% | |
| GATGGAGTTCAAATCTCCTT+CGG | - | chr1.1:25094311-25094330 | MS.gene063563:intron | 40.0% | |
| GATTGCAAGAATTGTGTGCA+GGG | + | chr1.1:25094602-25094621 | None:intergenic | 40.0% | |
| GCAATGTTTCAGATGACGTT+TGG | - | chr1.1:25093873-25093892 | MS.gene063563:intron | 40.0% | |
| GCTAAAAATTCCCCAAAAGC+AGG | + | chr1.1:25096591-25096610 | None:intergenic | 40.0% | |
| GCTTGCAACTGTTCAACAAA+CGG | + | chr1.1:25095605-25095624 | None:intergenic | 40.0% | |
| GGTCAATCTCATTCAATGTG+GGG | - | chr1.1:25093544-25093563 | MS.gene063563:intron | 40.0% | |
| GGTGCTAACAATTCCTTTGT+TGG | - | chr1.1:25093360-25093379 | MS.gene063563:intron | 40.0% | |
| GGTGGTGTATATGACTTAGT+AGG | - | chr1.1:25095289-25095308 | MS.gene063563:intron | 40.0% | |
| GTAGAAGAAGATGCATTCTG+AGG | - | chr1.1:25092722-25092741 | MS.gene063563:CDS | 40.0% | |
| TAATGCTCTTGATACTGCTG+AGG | - | chr1.1:25093956-25093975 | MS.gene063563:intron | 40.0% | |
| TATAACCTCAACTCAAGGGA+TGG | - | chr1.1:25094293-25094312 | MS.gene063563:intron | 40.0% | |
| TATATGAACTCGCCCAACAA+AGG | + | chr1.1:25093376-25093395 | None:intergenic | 40.0% | |
| TCAACAATCCATTGCAGTAC+CGG | - | chr1.1:25092782-25092801 | MS.gene063563:CDS | 40.0% | |
| TCAGACCATACTCTAAACCA+TGG | - | chr1.1:25097298-25097317 | MS.gene063563:intron | 40.0% | |
| TCTCGCCACTTCTATAATGT+TGG | - | chr1.1:25094429-25094448 | MS.gene063563:intron | 40.0% | |
| TGCTGGTACGATGTCTAATT+CGG | + | chr1.1:25097171-25097190 | None:intergenic | 40.0% | |
| TGGTCCAAGAACCAACTAAT+CGG | + | chr1.1:25093453-25093472 | None:intergenic | 40.0% | |
| TGGTGTGAGAGAATGAGAAA+TGG | + | chr1.1:25092665-25092684 | None:intergenic | 40.0% | |
| TTCGAACTTGACACCTAAAG+AGG | + | chr1.1:25093333-25093352 | None:intergenic | 40.0% | |
| TTCTTACCCGTGAAAGTGAT+TGG | + | chr1.1:25097102-25097121 | None:intergenic | 40.0% | |
| TTGAAGGTGGCAAGAGAAAT+AGG | - | chr1.1:25096503-25096522 | MS.gene063563:intron | 40.0% | |
| ! | AGTACAGTTCTTTTCTGACG+TGG | - | chr1.1:25096166-25096185 | MS.gene063563:intron | 40.0% |
| ! | CCAAATCTCAATCTAGCTTC+AGG | + | chr1.1:25094964-25094983 | None:intergenic | 40.0% |
| ! | TTCACCGATTAGTTGGTTCT+TGG | - | chr1.1:25093446-25093465 | MS.gene063563:intron | 40.0% |
| !! | CATACATTCTCCTGCTTTTG+GGG | - | chr1.1:25096578-25096597 | MS.gene063563:intron | 40.0% |
| !! | GCATACATTCTCCTGCTTTT+GGG | - | chr1.1:25096577-25096596 | MS.gene063563:intron | 40.0% |
| !! | GTACTGCAATGGATTGTTGA+TGG | + | chr1.1:25092782-25092801 | None:intergenic | 40.0% |
| !! | TGTTTTTGCAGTTGATCTCG+TGG | - | chr1.1:25096925-25096944 | MS.gene063563:intron | 40.0% |
| AACAATGCAACGTAGCGATC+TGG | + | chr1.1:25095539-25095558 | None:intergenic | 45.0% | |
| AACTTCACACCCGCTAACTT+AGG | + | chr1.1:25096874-25096893 | None:intergenic | 45.0% | |
| AAGGAATTGTTAGCACCTGG+GGG | + | chr1.1:25093357-25093376 | None:intergenic | 45.0% | |
| AATCCTATCATCCACTAGCG+AGG | + | chr1.1:25093424-25093443 | None:intergenic | 45.0% | |
| ACTCCAAGTTAGGGTTCAAC+TGG | + | chr1.1:25096790-25096809 | None:intergenic | 45.0% | |
| ACTTCACACCCGCTAACTTA+GGG | + | chr1.1:25096873-25096892 | None:intergenic | 45.0% | |
| AGAAATGGCAACAACGTCAG+AGG | + | chr1.1:25092650-25092669 | None:intergenic | 45.0% | |
| AGTCCAGTTGAACCCTAACT+TGG | - | chr1.1:25096784-25096803 | MS.gene063563:intron | 45.0% | |
| AGTTGAACCCTAACTTGGAG+TGG | - | chr1.1:25096789-25096808 | MS.gene063563:intron | 45.0% | |
| ATCGTACCAGCATGACTTCT+GGG | - | chr1.1:25097179-25097198 | MS.gene063563:intron | 45.0% | |
| ATTCCTGTCATGACTTCTGC+TGG | + | chr1.1:25097553-25097572 | None:intergenic | 45.0% | |
| CAAATCTCCTTCGGGATATG+TGG | - | chr1.1:25094320-25094339 | MS.gene063563:intron | 45.0% | |
| CAAGCAAGCTATAGCTGTTC+TGG | + | chr1.1:25096125-25096144 | None:intergenic | 45.0% | |
| CTGAACCATCCAGTTCAGTT+TGG | - | chr1.1:25097259-25097278 | MS.gene063563:intron | 45.0% | |
| GAAGTCTCAATCTCGTGACA+AGG | - | chr1.1:25094768-25094787 | MS.gene063563:intron | 45.0% | |
| GAGAAAAGCCTTAAGCGTCT+TGG | - | chr1.1:25095173-25095192 | MS.gene063563:intron | 45.0% | |
| GATCGCTACGTTGCATTGTT+TGG | - | chr1.1:25095539-25095558 | MS.gene063563:intron | 45.0% | |
| GGGCCCAAAATTAATTCTGG+AGG | + | chr1.1:25093228-25093247 | None:intergenic | 45.0% | |
| GTCATGACTTCTGCTGGTAA+AGG | + | chr1.1:25097547-25097566 | None:intergenic | 45.0% | |
| GTCCATGCAGCTAAAGTTGA+GGG | - | chr1.1:25096078-25096097 | MS.gene063563:intron | 45.0% | |
| GTTGAACCCTAACTTGGAGT+GGG | - | chr1.1:25096790-25096809 | MS.gene063563:intron | 45.0% | |
| TGAGACTTCATATGGGGTGA+TGG | - | chr1.1:25096050-25096069 | MS.gene063563:intron | 45.0% | |
| TGTGAGAGATCGTCCATTCA+TGG | - | chr1.1:25097447-25097466 | MS.gene063563:CDS | 45.0% | |
| TGTTCAACAAACGGCACACT+AGG | + | chr1.1:25095596-25095615 | None:intergenic | 45.0% | |
| TTACCAGCAGAAGTCATGAC+AGG | - | chr1.1:25097547-25097566 | MS.gene063563:CDS | 45.0% | |
| TTCAGAACCACATATCCCGA+AGG | + | chr1.1:25094330-25094349 | None:intergenic | 45.0% | |
| TTGAACCCTAACTTGGAGTG+GGG | - | chr1.1:25096791-25096810 | MS.gene063563:intron | 45.0% | |
| TTGCTATCCTATTCCCCACT+AGG | - | chr1.1:25096980-25096999 | MS.gene063563:intron | 45.0% | |
| TTTGCTCAGTGGTAAGAGCT+TGG | - | chr1.1:25094267-25094286 | MS.gene063563:intron | 45.0% | |
| ! | ACCTAAAGAGGCATACTCCT+AGG | + | chr1.1:25093321-25093340 | None:intergenic | 45.0% |
| ! | CGACAATGCAGACATTTTGC+GGG | - | chr1.1:25095121-25095140 | MS.gene063563:CDS | 45.0% |
| ! | GAAGAAGATGCATTCTGAGG+AGG | - | chr1.1:25092725-25092744 | MS.gene063563:CDS | 45.0% |
| ! | GCGACAATGCAGACATTTTG+CGG | - | chr1.1:25095120-25095139 | MS.gene063563:CDS | 45.0% |
| ! | GGCATACATTCTCCTGCTTT+TGG | - | chr1.1:25096576-25096595 | MS.gene063563:intron | 45.0% |
| ! | GTGTTGTTGAGAGACAGTGA+TGG | + | chr1.1:25092685-25092704 | None:intergenic | 45.0% |
| ! | TCGCTAGTGGATGATAGGAT+TGG | - | chr1.1:25093423-25093442 | MS.gene063563:intron | 45.0% |
| ! | TGAATGAGGTGTTTGCTCAG+TGG | - | chr1.1:25094256-25094275 | MS.gene063563:intron | 45.0% |
| ! | TGCTGTTGTTGTTGTATCGG+TGG | - | chr1.1:25095327-25095346 | MS.gene063563:intron | 45.0% |
| !! | AATTTTGGGCCCTCTAGAAG+TGG | - | chr1.1:25093236-25093255 | MS.gene063563:CDS | 45.0% |
| !! | CCGCCATTTTGAAGGATCAT+AGG | + | chr1.1:25095573-25095592 | None:intergenic | 45.0% |
| !! | CTGCAATGGATTGTTGATGG+CGG | + | chr1.1:25092779-25092798 | None:intergenic | 45.0% |
| !! | CTTGAGTTGGCCAAGAAACA+TGG | - | chr1.1:25097394-25097413 | MS.gene063563:CDS | 45.0% |
| !! | GGATTGGTTCACCGATTAGT+TGG | - | chr1.1:25093439-25093458 | MS.gene063563:intron | 45.0% |
| !! | TTTTAGTTGCCAGAGGTGCA+AGG | - | chr1.1:25096480-25096499 | MS.gene063563:intron | 45.0% |
| !!! | AGACATTTTGCGGGTTGATG+CGG | - | chr1.1:25095130-25095149 | MS.gene063563:CDS | 45.0% |
| !!! | GTTTTGACTTAGAGAAGCCG+AGG | - | chr1.1:25095718-25095737 | MS.gene063563:intron | 45.0% |
| !! | AAAATTAATGTAAAAATAAA+AGG | - | chr1.1:25093591-25093610 | MS.gene063563:intron | 5.0% |
| !!! | TTTTTTAAAAATTTGATATA+TGG | + | chr1.1:25093473-25093492 | None:intergenic | 5.0% |
| AGAGGAGAAAGAGCAGACAC+CGG | + | chr1.1:25092632-25092651 | None:intergenic | 50.0% | |
| ATACTCCTAGGCCAATCCCT+GGG | + | chr1.1:25093309-25093328 | None:intergenic | 50.0% | |
| CACCATGACCCTAAGTTAGC+GGG | - | chr1.1:25096862-25096881 | MS.gene063563:intron | 50.0% | |
| CATCGTACCAGCATGACTTC+TGG | - | chr1.1:25097178-25097197 | MS.gene063563:intron | 50.0% | |
| CCAAGTTTCCGGTACTGCAA+TGG | + | chr1.1:25092793-25092812 | None:intergenic | 50.0% | |
| CGTCCATGCAGCTAAAGTTG+AGG | - | chr1.1:25096077-25096096 | MS.gene063563:intron | 50.0% | |
| CTATCCTATTCCCCACTAGG+CGG | - | chr1.1:25096983-25097002 | MS.gene063563:intron | 50.0% | |
| GAATCTCTTCCCTGGCTACA+TGG | - | chr1.1:25097066-25097085 | MS.gene063563:intron | 50.0% | |
| GACGTTTGGGGAGCAAAACA+CGG | - | chr1.1:25093887-25093906 | MS.gene063563:intron | 50.0% | |
| GCACCATGACCCTAAGTTAG+CGG | - | chr1.1:25096861-25096880 | MS.gene063563:intron | 50.0% | |
| GGAAGACTGAATCTCTTCCC+TGG | - | chr1.1:25097058-25097077 | MS.gene063563:intron | 50.0% | |
| GGTCAGAGTCACCAAGTTTC+CGG | + | chr1.1:25092804-25092823 | None:intergenic | 50.0% | |
| GTCCCTCAACTTTAGCTGCA+TGG | + | chr1.1:25096083-25096102 | None:intergenic | 50.0% | |
| ! | CCATTGCAGTACCGGAAACT+TGG | - | chr1.1:25092790-25092809 | MS.gene063563:CDS | 50.0% |
| ! | GAACTCCATCCCTTGAGTTG+AGG | + | chr1.1:25094301-25094320 | None:intergenic | 50.0% |
| ! | GCCTAGGAGTATGCCTCTTT+AGG | - | chr1.1:25093317-25093336 | MS.gene063563:intron | 50.0% |
| !! | ACACTAGGCCGCCATTTTGA+AGG | + | chr1.1:25095581-25095600 | None:intergenic | 50.0% |
| !! | CAATTGCGGTTTTGTCCGAG+TGG | + | chr1.1:25097225-25097244 | None:intergenic | 50.0% |
| !! | TTGATGGCGGCACAAACAAG+AGG | + | chr1.1:25092766-25092785 | None:intergenic | 50.0% |
| AATCCAAGCGCGAGCTGAAC+AGG | + | chr1.1:25097427-25097446 | None:intergenic | 55.0% | |
| ACCAGCATGACTTCTGGGTC+AGG | - | chr1.1:25097184-25097203 | MS.gene063563:intron | 55.0% | |
| ACCTGACCCAGAAGTCATGC+TGG | + | chr1.1:25097188-25097207 | None:intergenic | 55.0% | |
| CACCCGCTAACTTAGGGTCA+TGG | + | chr1.1:25096867-25096886 | None:intergenic | 55.0% | |
| CACCTTCAACCTTGCACCTC+TGG | + | chr1.1:25096492-25096511 | None:intergenic | 55.0% | |
| CATACTCCTAGGCCAATCCC+TGG | + | chr1.1:25093310-25093329 | None:intergenic | 55.0% | |
| CCAATCCCTGGGTTACATGC+TGG | + | chr1.1:25093298-25093317 | None:intergenic | 55.0% | |
| CCAGCATGTAACCCAGGGAT+TGG | - | chr1.1:25093295-25093314 | MS.gene063563:intron | 55.0% | |
| CTTCAATTGGGCCTCGCTAG+TGG | - | chr1.1:25093410-25093429 | MS.gene063563:intron | 55.0% | |
| GTGTCAAGTTCGAATCCCCC+AGG | - | chr1.1:25093339-25093358 | MS.gene063563:intron | 55.0% | |
| TGAGGAGGACGAGAACTGTG+AGG | - | chr1.1:25092740-25092759 | MS.gene063563:CDS | 55.0% | |
| ! | CAGAGGTGCAAGGTTGAAGG+TGG | - | chr1.1:25096490-25096509 | MS.gene063563:intron | 55.0% |
| ! | TGCCAGAGGTGCAAGGTTGA+AGG | - | chr1.1:25096487-25096506 | MS.gene063563:intron | 55.0% |
| !! | TGTAACCCAGGGATTGGCCT+AGG | - | chr1.1:25093301-25093320 | MS.gene063563:intron | 55.0% |
| ACTCCTGTTCAGCTCGCGCT+TGG | - | chr1.1:25097421-25097440 | MS.gene063563:CDS | 60.0% | |
| TCCTATTCCCCACTAGGCGG+CGG | - | chr1.1:25096986-25097005 | MS.gene063563:intron | 60.0% | |
| ! | AGAGTGTTCCGCCGCCTAGT+GGG | + | chr1.1:25096997-25097016 | None:intergenic | 60.0% |
| ! | GGGCCTCGCTAGTGGATGAT+AGG | - | chr1.1:25093418-25093437 | MS.gene063563:intron | 60.0% |
| CTAGGCGGCGGAACACTCTC+TGG | - | chr1.1:25096998-25097017 | MS.gene063563:intron | 65.0% | |
| GAGTGTTCCGCCGCCTAGTG+GGG | + | chr1.1:25096996-25097015 | None:intergenic | 65.0% | |
| TCCGCCGCCTAGTGGGGAAT+AGG | + | chr1.1:25096990-25097009 | None:intergenic | 65.0% | |
| !! | GAGAGTGTTCCGCCGCCTAG+TGG | + | chr1.1:25096998-25097017 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 25092625 | 25097615 | 25092625 | ID=MS.gene063563 |
| chr1.1 | mRNA | 25092625 | 25097615 | 25092625 | ID=MS.gene063563.t1;Parent=MS.gene063563 |
| chr1.1 | exon | 25097388 | 25097615 | 25097388 | ID=MS.gene063563.t1.exon1;Parent=MS.gene063563.t1 |
| chr1.1 | CDS | 25097388 | 25097615 | 25097388 | ID=cds.MS.gene063563.t1;Parent=MS.gene063563.t1 |
| chr1.1 | exon | 25096260 | 25096355 | 25096260 | ID=MS.gene063563.t1.exon2;Parent=MS.gene063563.t1 |
| chr1.1 | CDS | 25096260 | 25096355 | 25096260 | ID=cds.MS.gene063563.t1;Parent=MS.gene063563.t1 |
| chr1.1 | exon | 25095451 | 25095534 | 25095451 | ID=MS.gene063563.t1.exon3;Parent=MS.gene063563.t1 |
| chr1.1 | CDS | 25095451 | 25095534 | 25095451 | ID=cds.MS.gene063563.t1;Parent=MS.gene063563.t1 |
| chr1.1 | exon | 25095012 | 25095172 | 25095012 | ID=MS.gene063563.t1.exon4;Parent=MS.gene063563.t1 |
| chr1.1 | CDS | 25095012 | 25095172 | 25095012 | ID=cds.MS.gene063563.t1;Parent=MS.gene063563.t1 |
| chr1.1 | exon | 25094588 | 25094705 | 25094588 | ID=MS.gene063563.t1.exon5;Parent=MS.gene063563.t1 |
| chr1.1 | CDS | 25094588 | 25094705 | 25094588 | ID=cds.MS.gene063563.t1;Parent=MS.gene063563.t1 |
| chr1.1 | exon | 25094078 | 25094213 | 25094078 | ID=MS.gene063563.t1.exon6;Parent=MS.gene063563.t1 |
| chr1.1 | CDS | 25094078 | 25094213 | 25094078 | ID=cds.MS.gene063563.t1;Parent=MS.gene063563.t1 |
| chr1.1 | exon | 25093126 | 25093304 | 25093126 | ID=MS.gene063563.t1.exon7;Parent=MS.gene063563.t1 |
| chr1.1 | CDS | 25093126 | 25093304 | 25093126 | ID=cds.MS.gene063563.t1;Parent=MS.gene063563.t1 |
| chr1.1 | exon | 25092625 | 25092864 | 25092625 | ID=MS.gene063563.t1.exon8;Parent=MS.gene063563.t1 |
| chr1.1 | CDS | 25092625 | 25092864 | 25092625 | ID=cds.MS.gene063563.t1;Parent=MS.gene063563.t1 |
| Gene Sequence |
| Protein sequence |
