Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057207.t1 | AES72571.2 | 98.1 | 365 | 5 | 2 | 1 | 365 | 1 | 363 | 1.20E-204 | 722.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057207.t1 | Q56Y42 | 73.5 | 366 | 92 | 2 | 1 | 365 | 3 | 364 | 1.3e-159 | 563.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057207.t1 | G7J873 | 98.1 | 365 | 5 | 2 | 1 | 365 | 1 | 363 | 8.7e-205 | 722.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052253 | MS.gene057207 | 0.820432 | 6.88E-53 | -1.69E-46 |
| MS.gene052322 | MS.gene057207 | 0.802691 | 4.98E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene057207 | 0.82146 | 3.99E-53 | -1.69E-46 |
| MS.gene056659 | MS.gene057207 | 0.803987 | 2.68E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene057207 | 0.817149 | 3.83E-52 | -1.69E-46 |
| MS.gene057207 | MS.gene059688 | 0.817732 | 2.83E-52 | -1.69E-46 |
| MS.gene057207 | MS.gene059692 | 0.816629 | 5.01E-52 | -1.69E-46 |
| MS.gene057207 | MS.gene059695 | 0.819897 | 9.13E-53 | -1.69E-46 |
| MS.gene057207 | MS.gene06704 | 0.801117 | 1.05E-48 | -1.69E-46 |
| MS.gene057207 | MS.gene067414 | 0.809166 | 2.16E-50 | -1.69E-46 |
| MS.gene057207 | MS.gene069395 | 0.804068 | 2.58E-49 | -1.69E-46 |
| MS.gene057207 | MS.gene069859 | 0.829935 | 3.90E-55 | -1.69E-46 |
| MS.gene057207 | MS.gene070266 | 0.802862 | 4.59E-49 | -1.69E-46 |
| MS.gene057207 | MS.gene072888 | 0.802287 | 6.03E-49 | -1.69E-46 |
| MS.gene057207 | MS.gene07311 | 0.804175 | 2.45E-49 | -1.69E-46 |
| MS.gene057207 | MS.gene07315 | 0.820533 | 6.52E-53 | -1.69E-46 |
| MS.gene057207 | MS.gene073295 | 0.815402 | 9.42E-52 | -1.69E-46 |
| MS.gene057207 | MS.gene07366 | 0.825884 | 3.67E-54 | -1.69E-46 |
| MS.gene057207 | MS.gene20866 | 0.804255 | 2.36E-49 | -1.69E-46 |
| MS.gene057207 | MS.gene20910 | 0.821261 | 4.44E-53 | -1.69E-46 |
| MS.gene057207 | MS.gene22985 | 0.828523 | 8.58E-55 | -1.69E-46 |
| MS.gene057207 | MS.gene23357 | 0.860092 | 2.63E-63 | -1.69E-46 |
| MS.gene057207 | MS.gene24098 | 0.802914 | 4.47E-49 | -1.69E-46 |
| MS.gene057207 | MS.gene25171 | 0.80538 | 1.37E-49 | -1.69E-46 |
| MS.gene057207 | MS.gene25693 | 0.817922 | 2.56E-52 | -1.69E-46 |
| MS.gene057207 | MS.gene28314 | 0.830851 | 2.33E-55 | -1.69E-46 |
| MS.gene057207 | MS.gene33961 | 0.801208 | 1.00E-48 | -1.69E-46 |
| MS.gene057207 | MS.gene34845 | 0.817075 | 3.98E-52 | -1.69E-46 |
| MS.gene057207 | MS.gene36507 | 0.804642 | 1.96E-49 | -1.69E-46 |
| MS.gene057207 | MS.gene36864 | 0.821728 | 3.46E-53 | -1.69E-46 |
| MS.gene057207 | MS.gene38802 | 0.804825 | 1.79E-49 | -1.69E-46 |
| MS.gene057207 | MS.gene47758 | 0.81197 | 5.36E-51 | -1.69E-46 |
| MS.gene057207 | MS.gene48151 | 0.80519 | 1.50E-49 | -1.69E-46 |
| MS.gene057207 | MS.gene49048 | 0.802823 | 4.67E-49 | -1.69E-46 |
| MS.gene057207 | MS.gene49050 | 0.832583 | 8.70E-56 | -1.69E-46 |
| MS.gene057207 | MS.gene52600 | 0.800978 | 1.12E-48 | -1.69E-46 |
| MS.gene057207 | MS.gene54210 | 0.813668 | 2.28E-51 | -1.69E-46 |
| MS.gene057207 | MS.gene54999 | 0.807893 | 4.05E-50 | -1.69E-46 |
| MS.gene057207 | MS.gene55270 | 0.820634 | 6.18E-53 | -1.69E-46 |
| MS.gene057207 | MS.gene56411 | 0.812907 | 3.35E-51 | -1.69E-46 |
| MS.gene057207 | MS.gene57561 | 0.82511 | 5.60E-54 | -1.69E-46 |
| MS.gene057207 | MS.gene58499 | 0.838544 | 2.70E-57 | -1.69E-46 |
| MS.gene057207 | MS.gene58500 | 0.839951 | 1.17E-57 | -1.69E-46 |
| MS.gene057207 | MS.gene58501 | 0.844333 | 8.07E-59 | -1.69E-46 |
| MS.gene057207 | MS.gene59608 | 0.82643 | 2.73E-54 | -1.69E-46 |
| MS.gene057207 | MS.gene63538 | 0.81619 | 6.28E-52 | -1.69E-46 |
| MS.gene057207 | MS.gene67875 | 0.801052 | 1.08E-48 | -1.69E-46 |
| MS.gene057207 | MS.gene70267 | 0.800321 | 1.52E-48 | -1.69E-46 |
| MS.gene057207 | MS.gene70352 | 0.821446 | 4.02E-53 | -1.69E-46 |
| MS.gene057207 | MS.gene74946 | 0.83402 | 3.82E-56 | -1.69E-46 |
| MS.gene057207 | MS.gene76634 | 0.821831 | 3.28E-53 | -1.69E-46 |
| MS.gene057207 | MS.gene77677 | 0.821077 | 4.89E-53 | -1.69E-46 |
| MS.gene057207 | MS.gene79179 | 0.801903 | 7.23E-49 | -1.69E-46 |
| MS.gene057207 | MS.gene82772 | 0.814033 | 1.89E-51 | -1.69E-46 |
| MS.gene057207 | MS.gene82939 | 0.805384 | 1.37E-49 | -1.69E-46 |
| MS.gene057207 | MS.gene85703 | 0.825428 | 4.71E-54 | -1.69E-46 |
| MS.gene057207 | MS.gene86413 | 0.814525 | 1.47E-51 | -1.69E-46 |
| MS.gene057207 | MS.gene92773 | 0.818918 | 1.53E-52 | -1.69E-46 |
| MS.gene057207 | MS.gene94785 | 0.809282 | 2.04E-50 | -1.69E-46 |
| MS.gene057207 | MS.gene97266 | 0.802978 | 4.34E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene057207 | MS.gene56146 | PPI |
| MS.gene93600 | MS.gene057207 | PPI |
| MS.gene057207 | MS.gene022151 | PPI |
| MS.gene057207 | MS.gene022150 | PPI |
| MS.gene057207 | MS.gene78373 | PPI |
| MS.gene53676 | MS.gene057207 | PPI |
| MS.gene057207 | MS.gene93616 | PPI |
| MS.gene057207 | MS.gene93601 | PPI |
| MS.gene057207 | MS.gene061628 | PPI |
| MS.gene45561 | MS.gene057207 | PPI |
| MS.gene057207 | MS.gene31081 | PPI |
| MS.gene057207 | MS.gene96904 | PPI |
| MS.gene052044 | MS.gene057207 | PPI |
| MS.gene057207 | MS.gene93602 | PPI |
| MS.gene057207 | MS.gene93623 | PPI |
| MS.gene43134 | MS.gene057207 | PPI |
| MS.gene057207 | MS.gene43135 | PPI |
| MS.gene057207 | MS.gene23855 | PPI |
| MS.gene56144 | MS.gene057207 | PPI |
| MS.gene43133 | MS.gene057207 | PPI |
| MS.gene057207 | MS.gene022153 | PPI |
| MS.gene057207 | MS.gene23854 | PPI |
| MS.gene057207 | MS.gene062500 | PPI |
| MS.gene057207 | MS.gene43136 | PPI |
| MS.gene057207 | MS.gene46955 | PPI |
| MS.gene057207 | MS.gene22221 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057207.t1 | MTR_3g092140 | 98.082 | 365 | 5 | 2 | 1 | 365 | 1 | 363 | 0.0 | 731 |
| MS.gene057207.t1 | MTR_3g092140 | 63.636 | 66 | 12 | 1 | 312 | 365 | 445 | 510 | 3.65e-15 | 77.0 |
| MS.gene057207.t1 | MTR_3g449790 | 41.284 | 327 | 178 | 7 | 36 | 353 | 33 | 354 | 1.24e-78 | 246 |
| MS.gene057207.t1 | MTR_3g449790 | 40.673 | 327 | 174 | 7 | 36 | 353 | 33 | 348 | 4.20e-78 | 244 |
| MS.gene057207.t1 | MTR_7g114990 | 26.488 | 336 | 212 | 12 | 34 | 353 | 4 | 320 | 6.88e-26 | 107 |
| MS.gene057207.t1 | MTR_7g114980 | 28.615 | 325 | 190 | 11 | 46 | 351 | 21 | 322 | 1.13e-25 | 106 |
| MS.gene057207.t1 | MTR_7g115010 | 29.032 | 310 | 177 | 13 | 48 | 347 | 21 | 297 | 5.54e-25 | 104 |
| MS.gene057207.t1 | MTR_1g102750 | 27.761 | 335 | 197 | 14 | 37 | 351 | 4 | 313 | 8.39e-25 | 103 |
| MS.gene057207.t1 | MTR_7g021850 | 28.523 | 298 | 170 | 12 | 73 | 351 | 38 | 311 | 2.27e-24 | 102 |
| MS.gene057207.t1 | MTR_7g021680 | 27.703 | 296 | 174 | 12 | 73 | 351 | 38 | 310 | 4.58e-22 | 96.3 |
| MS.gene057207.t1 | MTR_7g021820 | 27.703 | 296 | 174 | 12 | 73 | 351 | 38 | 310 | 4.58e-22 | 96.3 |
| MS.gene057207.t1 | MTR_7g114970 | 25.526 | 333 | 201 | 14 | 40 | 351 | 9 | 315 | 8.05e-21 | 92.8 |
| MS.gene057207.t1 | MTR_1g102750 | 27.869 | 305 | 175 | 14 | 37 | 321 | 4 | 283 | 2.69e-19 | 87.8 |
| MS.gene057207.t1 | MTR_6g073110 | 25.763 | 295 | 170 | 8 | 73 | 352 | 34 | 294 | 2.62e-18 | 85.1 |
| MS.gene057207.t1 | MTR_1g047250 | 25.220 | 341 | 216 | 14 | 37 | 357 | 2 | 323 | 1.76e-17 | 82.8 |
| MS.gene057207.t1 | MTR_1g042730 | 24.931 | 361 | 202 | 12 | 16 | 335 | 57 | 389 | 9.02e-17 | 81.6 |
| MS.gene057207.t1 | MTR_4g072320 | 25.402 | 311 | 175 | 11 | 75 | 367 | 30 | 301 | 3.77e-16 | 79.0 |
| MS.gene057207.t1 | MTR_8g088160 | 29.545 | 264 | 145 | 11 | 46 | 279 | 49 | 301 | 4.06e-16 | 79.0 |
| MS.gene057207.t1 | MTR_7g114970 | 25.083 | 303 | 180 | 14 | 40 | 321 | 9 | 285 | 1.38e-14 | 73.9 |
| MS.gene057207.t1 | MTR_4g072350 | 23.492 | 315 | 183 | 11 | 74 | 370 | 35 | 309 | 7.42e-14 | 72.0 |
| MS.gene057207.t1 | MTR_7g114970 | 25.000 | 224 | 144 | 8 | 139 | 351 | 11 | 221 | 7.84e-14 | 71.2 |
| MS.gene057207.t1 | MTR_7g114970 | 24.834 | 302 | 180 | 14 | 40 | 320 | 9 | 284 | 8.87e-14 | 71.6 |
| MS.gene057207.t1 | MTR_7g070500 | 22.989 | 348 | 196 | 10 | 47 | 376 | 22 | 315 | 1.09e-13 | 71.6 |
| MS.gene057207.t1 | MTR_7g114970 | 26.667 | 180 | 111 | 6 | 183 | 351 | 4 | 173 | 6.29e-13 | 67.4 |
| MS.gene057207.t1 | MTR_4g021350 | 25.157 | 318 | 181 | 9 | 48 | 354 | 16 | 287 | 1.20e-12 | 68.2 |
| MS.gene057207.t1 | MTR_4g021350 | 29.891 | 184 | 99 | 6 | 180 | 363 | 140 | 293 | 1.61e-12 | 68.2 |
| MS.gene057207.t1 | MTR_4g092750 | 25.581 | 301 | 181 | 13 | 46 | 334 | 11 | 280 | 3.08e-12 | 67.4 |
| MS.gene057207.t1 | MTR_7g070500 | 22.910 | 323 | 181 | 8 | 47 | 353 | 22 | 292 | 4.32e-12 | 66.6 |
| MS.gene057207.t1 | MTR_3g083130 | 23.569 | 297 | 170 | 11 | 81 | 360 | 45 | 301 | 4.55e-12 | 66.6 |
| MS.gene057207.t1 | MTR_8g070095 | 24.478 | 335 | 184 | 14 | 48 | 363 | 16 | 300 | 1.68e-11 | 65.1 |
| MS.gene057207.t1 | MTR_0374s0050 | 23.793 | 290 | 166 | 9 | 81 | 352 | 45 | 297 | 1.69e-11 | 65.1 |
| MS.gene057207.t1 | MTR_4g072060 | 22.540 | 315 | 179 | 10 | 51 | 344 | 14 | 284 | 2.73e-11 | 64.3 |
| MS.gene057207.t1 | MTR_2g085125 | 22.541 | 244 | 160 | 7 | 85 | 312 | 93 | 323 | 4.63e-11 | 64.3 |
| MS.gene057207.t1 | MTR_4g021410 | 26.984 | 189 | 109 | 5 | 178 | 366 | 56 | 215 | 9.61e-11 | 61.6 |
| MS.gene057207.t1 | MTR_4g092750 | 25.168 | 298 | 180 | 13 | 46 | 331 | 11 | 277 | 9.94e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057207.t1 | AT5G53580 | 73.497 | 366 | 92 | 2 | 1 | 365 | 3 | 364 | 0.0 | 567 |
| MS.gene057207.t1 | AT1G06690 | 39.823 | 339 | 178 | 8 | 30 | 353 | 38 | 365 | 7.23e-79 | 247 |
| MS.gene057207.t1 | AT1G60680 | 27.528 | 356 | 210 | 16 | 39 | 370 | 8 | 339 | 1.01e-23 | 100 |
| MS.gene057207.t1 | AT1G60710 | 28.614 | 332 | 195 | 15 | 39 | 352 | 8 | 315 | 5.04e-23 | 99.0 |
| MS.gene057207.t1 | AT1G04690 | 27.273 | 341 | 209 | 15 | 37 | 357 | 2 | 323 | 7.90e-22 | 95.5 |
| MS.gene057207.t1 | AT1G10810 | 28.440 | 327 | 194 | 16 | 39 | 348 | 8 | 311 | 7.94e-22 | 95.5 |
| MS.gene057207.t1 | AT1G60750 | 27.795 | 331 | 193 | 15 | 34 | 352 | 4 | 300 | 3.73e-21 | 93.6 |
| MS.gene057207.t1 | AT1G60690 | 27.219 | 338 | 200 | 16 | 35 | 352 | 4 | 315 | 2.53e-20 | 91.3 |
| MS.gene057207.t1 | AT1G60730 | 26.807 | 332 | 201 | 15 | 39 | 352 | 8 | 315 | 1.52e-19 | 89.0 |
| MS.gene057207.t1 | AT1G04420 | 25.641 | 312 | 170 | 12 | 5 | 267 | 9 | 307 | 1.24e-15 | 78.2 |
| MS.gene057207.t1 | AT1G60680 | 28.755 | 233 | 136 | 11 | 39 | 262 | 8 | 219 | 1.38e-15 | 76.3 |
| MS.gene057207.t1 | AT1G10810 | 27.826 | 230 | 137 | 10 | 39 | 260 | 8 | 216 | 1.98e-14 | 72.8 |
| MS.gene057207.t1 | AT2G27680 | 27.692 | 195 | 123 | 6 | 85 | 274 | 91 | 272 | 7.98e-13 | 69.7 |
| MS.gene057207.t1 | AT2G37770 | 25.092 | 271 | 157 | 9 | 81 | 339 | 38 | 274 | 1.11e-12 | 68.6 |
| MS.gene057207.t1 | AT2G37760 | 23.826 | 298 | 179 | 11 | 81 | 365 | 34 | 296 | 1.12e-12 | 68.6 |
| MS.gene057207.t1 | AT2G37760 | 23.826 | 298 | 179 | 11 | 81 | 365 | 34 | 296 | 1.12e-12 | 68.6 |
| MS.gene057207.t1 | AT5G01670 | 23.032 | 343 | 200 | 10 | 48 | 376 | 24 | 316 | 1.57e-12 | 68.2 |
| MS.gene057207.t1 | AT2G37760 | 24.211 | 285 | 168 | 11 | 81 | 352 | 34 | 283 | 2.37e-12 | 67.4 |
| MS.gene057207.t1 | AT2G37760 | 24.211 | 285 | 168 | 11 | 81 | 352 | 34 | 283 | 2.37e-12 | 67.4 |
| MS.gene057207.t1 | AT2G37760 | 24.211 | 285 | 168 | 11 | 81 | 352 | 34 | 283 | 2.83e-12 | 67.0 |
| MS.gene057207.t1 | AT1G59950 | 23.750 | 320 | 189 | 10 | 74 | 376 | 33 | 314 | 1.91e-11 | 65.1 |
| MS.gene057207.t1 | AT2G21250 | 20.930 | 301 | 166 | 8 | 74 | 344 | 26 | 284 | 3.53e-11 | 63.9 |
| MS.gene057207.t1 | AT2G37760 | 23.297 | 279 | 167 | 10 | 99 | 365 | 7 | 250 | 3.78e-11 | 63.5 |
| MS.gene057207.t1 | AT2G37760 | 23.297 | 279 | 167 | 10 | 99 | 365 | 7 | 250 | 3.78e-11 | 63.5 |
Find 89 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGGGGTAATCAGCTTCTT+TGG | 0.177516 | 3.2:-77600413 | MS.gene057207:CDS |
| AACACAAGCAGAGGAAAATT+TGG | 0.222359 | 3.2:-77597218 | MS.gene057207:CDS |
| ATGGGGTAATCAGCTTCTTT+GGG | 0.232653 | 3.2:-77600412 | MS.gene057207:CDS |
| TATGGTACTGGAAGGTTTAA+TGG | 0.252604 | 3.2:-77600300 | MS.gene057207:CDS |
| CCTTGGTCCAGTTGGAAGTT+TGG | 0.261270 | 3.2:+77598584 | None:intergenic |
| TTTGATACTGCTGATTCTTA+TGG | 0.261312 | 3.2:-77600318 | MS.gene057207:CDS |
| GAGGTCCCATCTTGAGCTTT+TGG | 0.268027 | 3.2:+77600469 | None:intergenic |
| CAGTCTGCAACTTGTGCTGC+TGG | 0.289543 | 3.2:+77596974 | None:intergenic |
| ATTCACTTCCTCAGAGAAAA+AGG | 0.291423 | 3.2:-77599751 | MS.gene057207:intron |
| CTAGGACTTGGAATGCTTAC+TGG | 0.291744 | 3.2:-77598621 | MS.gene057207:CDS |
| CAAGAGTATTTGTGATTCTC+TGG | 0.314126 | 3.2:-77598670 | MS.gene057207:CDS |
| AGGATGCAGATTGAGCAAAT+TGG | 0.320844 | 3.2:-77599536 | MS.gene057207:CDS |
| CTATTTAAGCAAATACTTCC+AGG | 0.333869 | 3.2:-77598445 | MS.gene057207:CDS |
| GGTCAAAGTGAGAAACTTCT+TGG | 0.335668 | 3.2:-77600279 | MS.gene057207:CDS |
| AGAGGAAAATTTGGGTGCTC+TGG | 0.361866 | 3.2:-77597209 | MS.gene057207:CDS |
| ATTGACTTGACTCCAGGAAT+TGG | 0.370976 | 3.2:+77597241 | None:intergenic |
| TGTATCTTCAAAAGCTGCTT+TGG | 0.383259 | 3.2:+77599158 | None:intergenic |
| TATGTCAGGTTGCAATAAAT+TGG | 0.388740 | 3.2:-77597285 | MS.gene057207:intron |
| TCTCTCAGGGAACTCAATAA+AGG | 0.394660 | 3.2:+77598415 | None:intergenic |
| GGCAGTTCGTCGATGCTTGC+AGG | 0.397750 | 3.2:-77599665 | MS.gene057207:intron |
| AGCTCTTTGGGATGGTTTAG+TGG | 0.402880 | 3.2:-77599462 | MS.gene057207:CDS |
| AGTGTGTCTCCAATGGGTTT+TGG | 0.403932 | 3.2:-77600444 | MS.gene057207:CDS |
| GCTGTTGGAGTGAGTAATTA+TGG | 0.410867 | 3.2:-77599182 | MS.gene057207:CDS |
| CGACGAACTGCCCTGGTGTA+AGG | 0.426017 | 3.2:+77599676 | None:intergenic |
| AGTCTGCAACTTGTGCTGCT+GGG | 0.426650 | 3.2:+77596975 | None:intergenic |
| AAAGGTACAATTCCAATTCC+TGG | 0.430013 | 3.2:-77597253 | MS.gene057207:CDS |
| GGATGCAGATTGAGCAAATT+GGG | 0.430878 | 3.2:-77599535 | MS.gene057207:CDS |
| ACCTCTGAGTGTGTCTCCAA+TGG | 0.431891 | 3.2:-77600451 | MS.gene057207:CDS |
| CAAAGAGCTAATTCTTGAAA+AGG | 0.445627 | 3.2:+77599476 | None:intergenic |
| TTTAGTGGCAATGTATGATA+AGG | 0.450190 | 3.2:-77599447 | MS.gene057207:intron |
| AAAGGAAAAGATGATGGTAA+AGG | 0.455252 | 3.2:+77600528 | None:intergenic |
| CCTCTGAGTGTGTCTCCAAT+GGG | 0.457314 | 3.2:-77600450 | MS.gene057207:CDS |
| TAGGGTTTAGTTCAAGCTGT+TGG | 0.459684 | 3.2:-77599197 | MS.gene057207:CDS |
| ACACAAGCAGAGGAAAATTT+GGG | 0.461452 | 3.2:-77597217 | MS.gene057207:CDS |
| CAACTGAAGTAGCTCGTTTG+AGG | 0.463411 | 3.2:+77597174 | None:intergenic |
| GCTTATAGTCCTCTAGGACT+TGG | 0.463947 | 3.2:-77598633 | MS.gene057207:CDS |
| ACTGCTGATTCTTATGGTAC+TGG | 0.471003 | 3.2:-77600312 | MS.gene057207:CDS |
| TGTGTTATTGACTTGACTCC+AGG | 0.471797 | 3.2:+77597235 | None:intergenic |
| TGGGGTAATCAGCTTCTTTG+GGG | 0.474196 | 3.2:-77600411 | MS.gene057207:CDS |
| CTTTCAAATTCCCTTCCCTA+TGG | 0.474412 | 3.2:-77600509 | MS.gene057207:CDS |
| TCAGCATCCAAACTTCCAAC+TGG | 0.478271 | 3.2:-77598591 | MS.gene057207:CDS |
| CTCAATAAAGGATCCAGTCC+TGG | 0.487530 | 3.2:+77598427 | None:intergenic |
| CAGCACAGCAATCGCCTCGC+AGG | 0.488464 | 3.2:-77597144 | MS.gene057207:CDS |
| TATCCATGGCGCCTTACACC+AGG | 0.489325 | 3.2:-77599687 | MS.gene057207:CDS |
| CAAGCATCGACGAACTGCCC+TGG | 0.494104 | 3.2:+77599669 | None:intergenic |
| GAGGAAAATTTGGGTGCTCT+GGG | 0.495873 | 3.2:-77597208 | MS.gene057207:CDS |
| CTCAAACGAGCTACTTCAGT+TGG | 0.502646 | 3.2:-77597173 | MS.gene057207:CDS |
| GTCAAAGTGAGAAACTTCTT+GGG | 0.505278 | 3.2:-77600278 | MS.gene057207:CDS |
| TTTGGGTGGATGATGGCCAT+AGG | 0.506984 | 3.2:+77600493 | None:intergenic |
| AAGGAAAAGATGATGGTAAA+GGG | 0.509867 | 3.2:+77600529 | None:intergenic |
| TAAGCAAATACTTCCAGGAC+TGG | 0.510322 | 3.2:-77598440 | MS.gene057207:CDS |
| AAAATTTGGGTGCTCTGGGT+TGG | 0.513121 | 3.2:-77597204 | MS.gene057207:CDS |
| CAAAGTTTGCTGCTTATCCA+TGG | 0.513583 | 3.2:-77599701 | MS.gene057207:CDS |
| GTCTGCAACTTGTGCTGCTG+GGG | 0.518695 | 3.2:+77596976 | None:intergenic |
| GTAATTGCTTATAGTCCTCT+AGG | 0.521768 | 3.2:-77598639 | MS.gene057207:CDS |
| TTTATTTGCAATATCTCTCA+GGG | 0.524302 | 3.2:+77598402 | None:intergenic |
| TAGGACTTGGAATGCTTACT+GGG | 0.528436 | 3.2:-77598620 | MS.gene057207:CDS |
| GTGGATGATGGCCATAGGGA+AGG | 0.533632 | 3.2:+77600498 | None:intergenic |
| TTGGGTGGATGATGGCCATA+GGG | 0.533850 | 3.2:+77600494 | None:intergenic |
| TGGATGATGGCCATAGGGAA+GGG | 0.537699 | 3.2:+77600499 | None:intergenic |
| TTTAACACGGCTGTTGAGAA+TGG | 0.538207 | 3.2:-77600351 | MS.gene057207:CDS |
| TGCCCTGGTGTAAGGCGCCA+TGG | 0.540496 | 3.2:+77599684 | None:intergenic |
| CAAGAATTAGCTCTTTGGGA+TGG | 0.548031 | 3.2:-77599470 | MS.gene057207:CDS |
| TTGGGATAGGACAACTGCAT+TGG | 0.550671 | 3.2:-77599517 | MS.gene057207:CDS |
| AAGAGTATTTGTGATTCTCT+GGG | 0.553509 | 3.2:-77598669 | MS.gene057207:CDS |
| CAGATTGAGCAAATTGGGAT+AGG | 0.555313 | 3.2:-77599530 | MS.gene057207:CDS |
| CCAAAACCAAAAGCTCAAGA+TGG | 0.558116 | 3.2:-77600475 | MS.gene057207:CDS |
| CTGATTCTTATGGTACTGGA+AGG | 0.564524 | 3.2:-77600308 | MS.gene057207:CDS |
| AAACGAGCTACTTCAGTTGG+AGG | 0.564890 | 3.2:-77597170 | MS.gene057207:CDS |
| GCCCAAGTTCCAAAACCCAT+TGG | 0.565398 | 3.2:+77600435 | None:intergenic |
| GGGGTAATCAGCTTCTTTGG+GGG | 0.567179 | 3.2:-77600410 | MS.gene057207:CDS |
| TCAACACACCTTGGTCCAGT+TGG | 0.576474 | 3.2:+77598576 | None:intergenic |
| CATAGGGAAGGGAATTTGAA+AGG | 0.580453 | 3.2:+77600510 | None:intergenic |
| TTGCTGTAGATCATCATCCA+TGG | 0.587813 | 3.2:+77600377 | None:intergenic |
| TATACCTGGGCTGAGCATAA+CGG | 0.590430 | 3.2:+77599110 | None:intergenic |
| AATTTGAAAGGAAAAGATGA+TGG | 0.594603 | 3.2:+77600522 | None:intergenic |
| ATAAATTGGTGCATATGCAA+AGG | 0.597596 | 3.2:-77597271 | MS.gene057207:CDS |
| CAAAACCAAAAGCTCAAGAT+GGG | 0.598155 | 3.2:-77600474 | MS.gene057207:CDS |
| AAGACGCAAAACCATGTCAC+AGG | 0.598290 | 3.2:-77598380 | MS.gene057207:intron |
| CAAGTCAATAACACAAGCAG+AGG | 0.602257 | 3.2:-77597227 | MS.gene057207:CDS |
| AGTTCCGTTATGCTCAGCCC+AGG | 0.606490 | 3.2:-77599114 | MS.gene057207:intron |
| ATCCATGGCGCCTTACACCA+GGG | 0.616890 | 3.2:-77599686 | MS.gene057207:CDS |
| TAGCAATCACAATTTCACTC+CGG | 0.618717 | 3.2:+77599724 | None:intergenic |
| CCAAACTTCCAACTGGACCA+AGG | 0.674362 | 3.2:-77598584 | MS.gene057207:intron |
| CCCATTGGAGACACACTCAG+AGG | 0.704747 | 3.2:+77600450 | None:intergenic |
| CATGATTACTTGAAAGACCG+CGG | 0.705238 | 3.2:-77599137 | MS.gene057207:CDS |
| GTAAGCATTCCAAGTCCTAG+AGG | 0.710131 | 3.2:+77598624 | None:intergenic |
| CTGAGCATAACGGAACTCCG+CGG | 0.744710 | 3.2:+77599120 | None:intergenic |
| TCTACAGCAAGTGTTTAACA+CGG | 0.750193 | 3.2:-77600364 | MS.gene057207:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAGATTATTCAATTAA+AGG | - | chr3.2:77599971-77599990 | MS.gene057207:intron | 10.0% |
| !! | TAATTCCAAATTAAATAAAA+TGG | + | chr3.2:77599547-77599566 | None:intergenic | 10.0% |
| !!! | AATTATTTGCTTTATTAATT+TGG | - | chr3.2:77597948-77597967 | MS.gene057207:intron | 10.0% |
| !!! | TTAATCCATTTTATTTAATT+TGG | - | chr3.2:77599539-77599558 | MS.gene057207:CDS | 10.0% |
| !! | AATAAAGCAAATAATTGTAA+TGG | + | chr3.2:77597944-77597963 | None:intergenic | 15.0% |
| !! | TATATTTATATTGTCATCTA+GGG | - | chr3.2:77598340-77598359 | MS.gene057207:intron | 15.0% |
| !! | TTATATTTATATTGTCATCT+AGG | - | chr3.2:77598339-77598358 | MS.gene057207:intron | 15.0% |
| !!! | TGTAATAATTTTGACATTTA+AGG | - | chr3.2:77598819-77598838 | MS.gene057207:intron | 15.0% |
| !! | AGACAATGAATTTATTTGAT+TGG | + | chr3.2:77600235-77600254 | None:intergenic | 20.0% |
| !! | ATAAAAAAAACGAAAGTAGT+AGG | + | chr3.2:77599221-77599240 | None:intergenic | 20.0% |
| !! | GACAATGAATTTATTTGATT+GGG | + | chr3.2:77600234-77600253 | None:intergenic | 20.0% |
| !! | TTATCCAGTTTATCAATTAT+AGG | - | chr3.2:77600469-77600488 | MS.gene057207:CDS | 20.0% |
| !! | TTTATTAACCTTGAAATATC+TGG | + | chr3.2:77600495-77600514 | None:intergenic | 20.0% |
| !!! | ATAATTCACGTTTTAATAGT+AGG | - | chr3.2:77598136-77598155 | MS.gene057207:intron | 20.0% |
| !!! | TGATTTGGAATTAATAACAA+AGG | + | chr3.2:77599080-77599099 | None:intergenic | 20.0% |
| !!! | TTATGCTGAGTTTTTAATAT+TGG | + | chr3.2:77599907-77599926 | None:intergenic | 20.0% |
| !!! | TTGAATGAAATGAATTTTCA+GGG | - | chr3.2:77597985-77598004 | MS.gene057207:intron | 20.0% |
| ! | AAATACACACAGAAATGAAA+AGG | + | chr3.2:77597353-77597372 | None:intergenic | 25.0% |
| ! | AATTTGAAAGGAAAAGATGA+TGG | + | chr3.2:77597036-77597055 | None:intergenic | 25.0% |
| ! | ACGACATTAAAAAATGAAGT+GGG | + | chr3.2:77600078-77600097 | None:intergenic | 25.0% |
| ! | ATACATTCAAATATTGCCTT+TGG | - | chr3.2:77598492-77598511 | MS.gene057207:intron | 25.0% |
| ! | GTTATTAATTCCAAATCACA+GGG | - | chr3.2:77599082-77599101 | MS.gene057207:intron | 25.0% |
| ! | TAATGTGCTAGTAAAAGAAA+AGG | + | chr3.2:77597658-77597677 | None:intergenic | 25.0% |
| ! | TATTCACTACTGAGATTAAA+AGG | + | chr3.2:77598525-77598544 | None:intergenic | 25.0% |
| ! | TCTAATTTGACAATAAACCA+TGG | + | chr3.2:77598552-77598571 | None:intergenic | 25.0% |
| ! | TGTTATTAATTCCAAATCAC+AGG | - | chr3.2:77599081-77599100 | MS.gene057207:intron | 25.0% |
| ! | TTATTAATTCCAAATCACAG+GGG | - | chr3.2:77599083-77599102 | MS.gene057207:intron | 25.0% |
| ! | TTGATTAATGTGAAAACTAC+AGG | + | chr3.2:77599702-77599721 | None:intergenic | 25.0% |
| ! | TTTAAAGAATGGTTCACTTA+AGG | + | chr3.2:77598173-77598192 | None:intergenic | 25.0% |
| ! | TTTATTTGCAATATCTCTCA+GGG | + | chr3.2:77599156-77599175 | None:intergenic | 25.0% |
| !! | CTTGAATGAAATGAATTTTC+AGG | - | chr3.2:77597984-77598003 | MS.gene057207:intron | 25.0% |
| !! | GAGTTTTTAATATTGGCATT+TGG | + | chr3.2:77599900-77599919 | None:intergenic | 25.0% |
| !! | GCACTTATAGTATAACTTTT+TGG | + | chr3.2:77597561-77597580 | None:intergenic | 25.0% |
| !! | TTCATTTCATTCAAGTTCAA+CGG | + | chr3.2:77597979-77597998 | None:intergenic | 25.0% |
| !!! | ACCTGGTTTGAAAAATATTT+TGG | + | chr3.2:77600442-77600461 | None:intergenic | 25.0% |
| !!! | ATGCAAACATTGACTTAATA+TGG | - | chr3.2:77597596-77597615 | MS.gene057207:intron | 25.0% |
| !!! | TAAGGCATTTTTTTATCAGT+AGG | - | chr3.2:77599408-77599427 | MS.gene057207:intron | 25.0% |
| !!! | TCCAAAATATTTTTCAAACC+AGG | - | chr3.2:77600438-77600457 | MS.gene057207:CDS | 25.0% |
| !!! | TTAGCATCAATAGCTTTTTT+CGG | - | chr3.2:77599050-77599069 | MS.gene057207:intron | 25.0% |
| !!! | TTTTATTTGCAATATCTCTC+AGG | + | chr3.2:77599157-77599176 | None:intergenic | 25.0% |
| !!! | TTTTCAAGAATTAGCTCTTT+GGG | - | chr3.2:77598081-77598100 | MS.gene057207:intron | 25.0% |
| !!! | TTTTTTTTAATATGCCATCG+TGG | - | chr3.2:77597401-77597420 | MS.gene057207:intron | 25.0% |
| AAACAGCTATGAAACAACTA+AGG | + | chr3.2:77597489-77597508 | None:intergenic | 30.0% | |
| AACAGAAAAGGAAAACGATA+AGG | - | chr3.2:77598595-77598614 | MS.gene057207:CDS | 30.0% | |
| AAGGATGAATGGAAAAGTAA+GGG | - | chr3.2:77597689-77597708 | MS.gene057207:intron | 30.0% | |
| AAGTTATGTTCTCCAAAAGA+TGG | + | chr3.2:77599779-77599798 | None:intergenic | 30.0% | |
| AGTTATGTTCTCCAAAAGAT+GGG | + | chr3.2:77599778-77599797 | None:intergenic | 30.0% | |
| AGTTGTAGTGTACAAAAGAT+TGG | + | chr3.2:77599857-77599876 | None:intergenic | 30.0% | |
| ATAAATTGGTGCATATGCAA+AGG | - | chr3.2:77600284-77600303 | MS.gene057207:CDS | 30.0% | |
| ATACTGACAGCATAATTTCA+AGG | + | chr3.2:77598746-77598765 | None:intergenic | 30.0% | |
| ATTATAGGCCAGATATTTCA+AGG | - | chr3.2:77600484-77600503 | MS.gene057207:CDS | 30.0% | |
| ATTATGCAAAACACTATACC+TGG | + | chr3.2:77598462-77598481 | None:intergenic | 30.0% | |
| CAAAGAGCTAATTCTTGAAA+AGG | + | chr3.2:77598082-77598101 | None:intergenic | 30.0% | |
| CACGACATTAAAAAATGAAG+TGG | + | chr3.2:77600079-77600098 | None:intergenic | 30.0% | |
| CATGTGATTAAACTGTTGTA+AGG | + | chr3.2:77597442-77597461 | None:intergenic | 30.0% | |
| CGAAAGTAGTAGGTAAAAAT+AGG | + | chr3.2:77599211-77599230 | None:intergenic | 30.0% | |
| CGAGGAAAATATCTACAAAA+TGG | + | chr3.2:77599645-77599664 | None:intergenic | 30.0% | |
| CTATTTAAGCAAATACTTCC+AGG | - | chr3.2:77599110-77599129 | MS.gene057207:intron | 30.0% | |
| TCAGTAGTGAATAATAACCA+TGG | - | chr3.2:77598532-77598551 | MS.gene057207:intron | 30.0% | |
| TGAATTTATTTGATTGGGCA+AGG | + | chr3.2:77600229-77600248 | None:intergenic | 30.0% | |
| TTATGCAAAACACTATACCT+GGG | + | chr3.2:77598461-77598480 | None:intergenic | 30.0% | |
| TTGAGAAACTACAACAGAAA+AGG | - | chr3.2:77598583-77598602 | MS.gene057207:intron | 30.0% | |
| TTTAATAGTAGGATCGCATA+AGG | - | chr3.2:77598147-77598166 | MS.gene057207:intron | 30.0% | |
| TTTAGTGGCAATGTATGATA+AGG | - | chr3.2:77598108-77598127 | MS.gene057207:intron | 30.0% | |
| TTTGACTGTCAATTCATTTG+AGG | - | chr3.2:77599314-77599333 | MS.gene057207:intron | 30.0% | |
| ! | AAAGGAAAAGATGATGGTAA+AGG | + | chr3.2:77597030-77597049 | None:intergenic | 30.0% |
| ! | AAGGAAAAGATGATGGTAAA+GGG | + | chr3.2:77597029-77597048 | None:intergenic | 30.0% |
| ! | AATGTGAAAACTACAGGTTT+TGG | + | chr3.2:77599696-77599715 | None:intergenic | 30.0% |
| ! | AATTTTCTTTGCTAAGCATG+GGG | - | chr3.2:77598845-77598864 | MS.gene057207:intron | 30.0% |
| ! | ACCATTCTTTAAAGACATTC+AGG | - | chr3.2:77598180-77598199 | MS.gene057207:intron | 30.0% |
| ! | CAATTTTCTTTGCTAAGCAT+GGG | - | chr3.2:77598844-77598863 | MS.gene057207:intron | 30.0% |
| ! | CCATTCTTTAAAGACATTCA+GGG | - | chr3.2:77598181-77598200 | MS.gene057207:intron | 30.0% |
| ! | TATGTCAGGTTGCAATAAAT+TGG | - | chr3.2:77600270-77600289 | MS.gene057207:CDS | 30.0% |
| ! | TTTTCTGTTGTAGTTTCTCA+AGG | + | chr3.2:77598584-77598603 | None:intergenic | 30.0% |
| !! | AACACAGCTTACTTTTGTAA+AGG | - | chr3.2:77600105-77600124 | MS.gene057207:intron | 30.0% |
| !! | AAGAGTATTTGTGATTCTCT+GGG | - | chr3.2:77598886-77598905 | MS.gene057207:intron | 30.0% |
| !! | ATTAAAAGGCATTTCTCCAA+AGG | + | chr3.2:77598511-77598530 | None:intergenic | 30.0% |
| !! | CACTTTTCTTTGAGTTATTC+TGG | + | chr3.2:77598720-77598739 | None:intergenic | 30.0% |
| !! | CTTTTCAAGAATTAGCTCTT+TGG | - | chr3.2:77598080-77598099 | MS.gene057207:intron | 30.0% |
| !! | GAATAGTTCTGATGTTGTTA+TGG | + | chr3.2:77600056-77600075 | None:intergenic | 30.0% |
| !! | TTGGTTGGTCTTTCTTTAAA+GGG | + | chr3.2:77600141-77600160 | None:intergenic | 30.0% |
| !! | TTTGATACTGCTGATTCTTA+TGG | - | chr3.2:77597237-77597256 | MS.gene057207:CDS | 30.0% |
| AAAGGAAGCAGACAATAAGT+TGG | + | chr3.2:77597335-77597354 | None:intergenic | 35.0% | |
| AAATATGTTCCAAGCCTGAA+GGG | - | chr3.2:77599342-77599361 | MS.gene057207:intron | 35.0% | |
| AACAATAGTGCTAGTGAATG+GGG | - | chr3.2:77599587-77599606 | MS.gene057207:intron | 35.0% | |
| AACACAAGCAGAGGAAAATT+TGG | - | chr3.2:77600337-77600356 | MS.gene057207:CDS | 35.0% | |
| AACTGGATAACATGTATACC+TGG | + | chr3.2:77600459-77600478 | None:intergenic | 35.0% | |
| ACACAAGCAGAGGAAAATTT+GGG | - | chr3.2:77600338-77600357 | MS.gene057207:CDS | 35.0% | |
| ACACAATTGGTGAAAACATG+AGG | + | chr3.2:77597784-77597803 | None:intergenic | 35.0% | |
| AGACCATGACCATAAATGAA+TGG | + | chr3.2:77598776-77598795 | None:intergenic | 35.0% | |
| AGTAGTATATCTTGCATGAG+TGG | - | chr3.2:77599383-77599402 | MS.gene057207:intron | 35.0% | |
| ATGCCACAACCATTCATTTA+TGG | - | chr3.2:77598764-77598783 | MS.gene057207:intron | 35.0% | |
| ATTCACTTCCTCAGAGAAAA+AGG | - | chr3.2:77597804-77597823 | MS.gene057207:intron | 35.0% | |
| CAAAACCAAAAGCTCAAGAT+GGG | - | chr3.2:77597081-77597100 | MS.gene057207:intron | 35.0% | |
| CAACAATAGTGCTAGTGAAT+GGG | - | chr3.2:77599586-77599605 | MS.gene057207:intron | 35.0% | |
| CAACCATTCATTTATGGTCA+TGG | - | chr3.2:77598770-77598789 | MS.gene057207:intron | 35.0% | |
| CTCCTTGATACATGTTTGAT+GGG | - | chr3.2:77597725-77597744 | MS.gene057207:intron | 35.0% | |
| CTGGCCTATAATTGATAAAC+TGG | + | chr3.2:77600476-77600495 | None:intergenic | 35.0% | |
| GAAAAAGATTACCTGTGACA+TGG | + | chr3.2:77599189-77599208 | None:intergenic | 35.0% | |
| GAAGGATGAATGGAAAAGTA+AGG | - | chr3.2:77597688-77597707 | MS.gene057207:intron | 35.0% | |
| GTAATTGCTTATAGTCCTCT+AGG | - | chr3.2:77598916-77598935 | MS.gene057207:intron | 35.0% | |
| GTCAAAGTGAGAAACTTCTT+GGG | - | chr3.2:77597277-77597296 | MS.gene057207:CDS | 35.0% | |
| TAAATATGTTCCAAGCCTGA+AGG | - | chr3.2:77599341-77599360 | MS.gene057207:intron | 35.0% | |
| TAGCAATCACAATTTCACTC+CGG | + | chr3.2:77597834-77597853 | None:intergenic | 35.0% | |
| TATCTTGCATGAGTGGTTTA+AGG | - | chr3.2:77599390-77599409 | MS.gene057207:intron | 35.0% | |
| TCTACAGCAAGTGTTTAACA+CGG | - | chr3.2:77597191-77597210 | MS.gene057207:CDS | 35.0% | |
| TGACCATAAATGAATGGTTG+TGG | + | chr3.2:77598770-77598789 | None:intergenic | 35.0% | |
| TGAGGAAGTGAATACACAAT+TGG | + | chr3.2:77597797-77597816 | None:intergenic | 35.0% | |
| TGTATCTTCAAAAGCTGCTT+TGG | + | chr3.2:77598400-77598419 | None:intergenic | 35.0% | |
| TTATCAGTAGGATTCGAACT+TGG | - | chr3.2:77599420-77599439 | MS.gene057207:intron | 35.0% | |
| TTCACTTCCTCAGAGAAAAA+GGG | - | chr3.2:77597805-77597824 | MS.gene057207:intron | 35.0% | |
| TTCCCATCAAACATGTATCA+AGG | + | chr3.2:77597730-77597749 | None:intergenic | 35.0% | |
| TTTATTTGATTGGGCAAGGT+TGG | + | chr3.2:77600225-77600244 | None:intergenic | 35.0% | |
| ! | AAAAGGCACATACATATAGC+GGG | + | chr3.2:77597641-77597660 | None:intergenic | 35.0% |
| ! | AAACTAAAACCAAGCTCTGA+TGG | - | chr3.2:77599931-77599950 | MS.gene057207:intron | 35.0% |
| ! | AAAGGTACAATTCCAATTCC+TGG | - | chr3.2:77600302-77600321 | MS.gene057207:CDS | 35.0% |
| ! | AAGTTCATTCGAGATTTTCG+AGG | - | chr3.2:77597300-77597319 | MS.gene057207:intron | 35.0% |
| ! | ATTTTCTTTGCTAAGCATGG+GGG | - | chr3.2:77598846-77598865 | MS.gene057207:intron | 35.0% |
| ! | CCCTGAATGTCTTTAAAGAA+TGG | + | chr3.2:77598184-77598203 | None:intergenic | 35.0% |
| ! | GAAAAGGCACATACATATAG+CGG | + | chr3.2:77597642-77597661 | None:intergenic | 35.0% |
| ! | GCAATTTTCTTTGCTAAGCA+TGG | - | chr3.2:77598843-77598862 | MS.gene057207:intron | 35.0% |
| ! | TATGGTACTGGAAGGTTTAA+TGG | - | chr3.2:77597255-77597274 | MS.gene057207:CDS | 35.0% |
| ! | TATTTTCATAGACTCCACGA+TGG | + | chr3.2:77597418-77597437 | None:intergenic | 35.0% |
| !! | AAACTACAGGTTTTGGTAGT+TGG | + | chr3.2:77599689-77599708 | None:intergenic | 35.0% |
| !! | CAAGAGTATTTGTGATTCTC+TGG | - | chr3.2:77598885-77598904 | MS.gene057207:intron | 35.0% |
| !! | GTTGGTTGGTCTTTCTTTAA+AGG | + | chr3.2:77600142-77600161 | None:intergenic | 35.0% |
| !!! | CATCTTGAGCTTTTGGTTTT+GGG | + | chr3.2:77597082-77597101 | None:intergenic | 35.0% |
| !!! | TAGACTTTGGTAGTGGTTTT+AGG | - | chr3.2:77599493-77599512 | MS.gene057207:CDS | 35.0% |
| !!! | TGTTTTTTCCTAGCAAGAAC+CGG | + | chr3.2:77598277-77598296 | None:intergenic | 35.0% |
| AATAGCAATCCCCTGTGATT+TGG | + | chr3.2:77599095-77599114 | None:intergenic | 40.0% | |
| AATATCACTCAGTTGCTCAG+AGG | - | chr3.2:77599266-77599285 | MS.gene057207:intron | 40.0% | |
| ACGCATCACATTGTTATGTC+AGG | - | chr3.2:77600256-77600275 | MS.gene057207:CDS | 40.0% | |
| AGATTGGATCAGAAGACCAA+AGG | + | chr3.2:77599841-77599860 | None:intergenic | 40.0% | |
| AGCGTAAAAGACAAGTTCAC+CGG | - | chr3.2:77598255-77598274 | MS.gene057207:intron | 40.0% | |
| AGGATGCAGATTGAGCAAAT+TGG | - | chr3.2:77598019-77598038 | MS.gene057207:intron | 40.0% | |
| AGTTCCATCTACTTTGGCAA+AGG | - | chr3.2:77599734-77599753 | MS.gene057207:CDS | 40.0% | |
| ATGGGGTAATCAGCTTCTTT+GGG | - | chr3.2:77597143-77597162 | MS.gene057207:CDS | 40.0% | |
| ATGTGACTGTGAAGGATGAA+TGG | - | chr3.2:77597678-77597697 | MS.gene057207:intron | 40.0% | |
| CAAGTCAATAACACAAGCAG+AGG | - | chr3.2:77600328-77600347 | MS.gene057207:CDS | 40.0% | |
| CAGATTGAGCAAATTGGGAT+AGG | - | chr3.2:77598025-77598044 | MS.gene057207:intron | 40.0% | |
| CATAGGGAAGGGAATTTGAA+AGG | + | chr3.2:77597048-77597067 | None:intergenic | 40.0% | |
| CATGATTACTTGAAAGACCG+CGG | - | chr3.2:77598418-77598437 | MS.gene057207:CDS | 40.0% | |
| CATTTATGGTCATGGTCTTC+TGG | - | chr3.2:77598778-77598797 | MS.gene057207:intron | 40.0% | |
| CCAAAACCAAAAGCTCAAGA+TGG | - | chr3.2:77597080-77597099 | MS.gene057207:intron | 40.0% | |
| CCAACAATAGTGCTAGTGAA+TGG | - | chr3.2:77599585-77599604 | MS.gene057207:intron | 40.0% | |
| CCATTCACTAGCACTATTGT+TGG | + | chr3.2:77599588-77599607 | None:intergenic | 40.0% | |
| CCTATTCTTCTGTCATACTC+AGG | - | chr3.2:77599802-77599821 | MS.gene057207:intron | 40.0% | |
| CCTGAGTATGACAGAAGAAT+AGG | + | chr3.2:77599805-77599824 | None:intergenic | 40.0% | |
| CTTTCAAATTCCCTTCCCTA+TGG | - | chr3.2:77597046-77597065 | MS.gene057207:intron | 40.0% | |
| GCACATTAATGTGACTGTGA+AGG | - | chr3.2:77597670-77597689 | MS.gene057207:intron | 40.0% | |
| GCTCCTTGATACATGTTTGA+TGG | - | chr3.2:77597724-77597743 | MS.gene057207:intron | 40.0% | |
| GCTGTTGGAGTGAGTAATTA+TGG | - | chr3.2:77598373-77598392 | MS.gene057207:intron | 40.0% | |
| GCTTACAGTTCCATCTACTT+TGG | - | chr3.2:77599728-77599747 | MS.gene057207:CDS | 40.0% | |
| GGATGCAGATTGAGCAAATT+GGG | - | chr3.2:77598020-77598039 | MS.gene057207:intron | 40.0% | |
| GGTCAAAGTGAGAAACTTCT+TGG | - | chr3.2:77597276-77597295 | MS.gene057207:CDS | 40.0% | |
| TAAGCAAATACTTCCAGGAC+TGG | - | chr3.2:77599115-77599134 | MS.gene057207:CDS | 40.0% | |
| TAGATGGAACTGTAAGCATG+CGG | + | chr3.2:77599725-77599744 | None:intergenic | 40.0% | |
| TAGGACAAGGACAGTTATGT+GGG | + | chr3.2:77600164-77600183 | None:intergenic | 40.0% | |
| TAGGACTTGGAATGCTTACT+GGG | - | chr3.2:77598935-77598954 | MS.gene057207:intron | 40.0% | |
| TCACTTCCTCAGAGAAAAAG+GGG | - | chr3.2:77597806-77597825 | MS.gene057207:intron | 40.0% | |
| TCTCATTCAGCAACTCAATG+AGG | + | chr3.2:77598673-77598692 | None:intergenic | 40.0% | |
| TCTCTCAGGGAACTCAATAA+AGG | + | chr3.2:77599143-77599162 | None:intergenic | 40.0% | |
| TTGCTGTAGATCATCATCCA+TGG | + | chr3.2:77597181-77597200 | None:intergenic | 40.0% | |
| TTGTCAGTTGTAACACACCT+AGG | + | chr3.2:77600183-77600202 | None:intergenic | 40.0% | |
| TTTAACACGGCTGTTGAGAA+TGG | - | chr3.2:77597204-77597223 | MS.gene057207:CDS | 40.0% | |
| TTTCTATGACCATCAGAGCT+TGG | + | chr3.2:77599943-77599962 | None:intergenic | 40.0% | |
| ! | CAAGAATTAGCTCTTTGGGA+TGG | - | chr3.2:77598085-77598104 | MS.gene057207:intron | 40.0% |
| ! | CTGATTCTTATGGTACTGGA+AGG | - | chr3.2:77597247-77597266 | MS.gene057207:CDS | 40.0% |
| ! | TAGGGTTTAGTTCAAGCTGT+TGG | - | chr3.2:77598358-77598377 | MS.gene057207:intron | 40.0% |
| !! | ACTGCTGATTCTTATGGTAC+TGG | - | chr3.2:77597243-77597262 | MS.gene057207:CDS | 40.0% |
| !! | ATATTTTGGATCATCCTGCG+AGG | + | chr3.2:77600428-77600447 | None:intergenic | 40.0% |
| !! | ATTGACTTGACTCCAGGAAT+TGG | + | chr3.2:77600317-77600336 | None:intergenic | 40.0% |
| !! | CAAAGTTTGCTGCTTATCCA+TGG | - | chr3.2:77597854-77597873 | MS.gene057207:intron | 40.0% |
| !! | TGTGTTATTGACTTGACTCC+AGG | + | chr3.2:77600323-77600342 | None:intergenic | 40.0% |
| !! | TTTTCAGGGCATCACTAGAT+AGG | - | chr3.2:77597999-77598018 | MS.gene057207:intron | 40.0% |
| !!! | CCATCTTGAGCTTTTGGTTT+TGG | + | chr3.2:77597083-77597102 | None:intergenic | 40.0% |
| !!! | TCCAATGGGTTTTGGAACTT+GGG | - | chr3.2:77597119-77597138 | MS.gene057207:CDS | 40.0% |
| !!! | TCTTGCTGCAGTTTTGTTGT+TGG | - | chr3.2:77596985-77597004 | MS.gene057207:CDS | 40.0% |
| !!! | TTTTGGTTTTGGGTGGATGA+TGG | + | chr3.2:77597072-77597091 | None:intergenic | 40.0% |
| AAACGAGCTACTTCAGTTGG+AGG | - | chr3.2:77600385-77600404 | MS.gene057207:CDS | 45.0% | |
| AAGACGCAAAACCATGTCAC+AGG | - | chr3.2:77599175-77599194 | MS.gene057207:CDS | 45.0% | |
| ACAAGGACAGTTATGTGGGT+TGG | + | chr3.2:77600160-77600179 | None:intergenic | 45.0% | |
| AGAGGAAAATTTGGGTGCTC+TGG | - | chr3.2:77600346-77600365 | MS.gene057207:CDS | 45.0% | |
| AGGCTCTATGCATCTTCCTT+TGG | - | chr3.2:77599822-77599841 | MS.gene057207:intron | 45.0% | |
| CAACTGAAGTAGCTCGTTTG+AGG | + | chr3.2:77600384-77600403 | None:intergenic | 45.0% | |
| CACATAACTGTCCTTGTCCT+AGG | - | chr3.2:77600163-77600182 | MS.gene057207:intron | 45.0% | |
| CATGGGGTAATCAGCTTCTT+TGG | - | chr3.2:77597142-77597161 | MS.gene057207:CDS | 45.0% | |
| CCATCTACTTTGGCAAAGGT+AGG | - | chr3.2:77599738-77599757 | MS.gene057207:CDS | 45.0% | |
| CCTACCTTTGCCAAAGTAGA+TGG | + | chr3.2:77599741-77599760 | None:intergenic | 45.0% | |
| CTACTACACAGTACACCTTC+AGG | + | chr3.2:77599368-77599387 | None:intergenic | 45.0% | |
| CTAGGACAAGGACAGTTATG+TGG | + | chr3.2:77600165-77600184 | None:intergenic | 45.0% | |
| CTAGGACTTGGAATGCTTAC+TGG | - | chr3.2:77598934-77598953 | MS.gene057207:intron | 45.0% | |
| CTCAAACGAGCTACTTCAGT+TGG | - | chr3.2:77600382-77600401 | MS.gene057207:CDS | 45.0% | |
| CTCAATAAAGGATCCAGTCC+TGG | + | chr3.2:77599131-77599150 | None:intergenic | 45.0% | |
| GAGGAAAATTTGGGTGCTCT+GGG | - | chr3.2:77600347-77600366 | MS.gene057207:CDS | 45.0% | |
| GATTGCACATCAACGCAGAA+AGG | + | chr3.2:77597919-77597938 | None:intergenic | 45.0% | |
| GCGTAAATGTCAACACACCT+TGG | + | chr3.2:77598991-77599010 | None:intergenic | 45.0% | |
| GTAAGCATTCCAAGTCCTAG+AGG | + | chr3.2:77598934-77598953 | None:intergenic | 45.0% | |
| GTTGTAACACACCTAGGACA+AGG | + | chr3.2:77600177-77600196 | None:intergenic | 45.0% | |
| TATACCTGGGCTGAGCATAA+CGG | + | chr3.2:77598448-77598467 | None:intergenic | 45.0% | |
| TCAGCATCCAAACTTCCAAC+TGG | - | chr3.2:77598964-77598983 | MS.gene057207:intron | 45.0% | |
| TGGGGTAATCAGCTTCTTTG+GGG | - | chr3.2:77597144-77597163 | MS.gene057207:CDS | 45.0% | |
| TTCAGCAACTCAATGAGGCA+TGG | + | chr3.2:77598668-77598687 | None:intergenic | 45.0% | |
| TTGGGATAGGACAACTGCAT+TGG | - | chr3.2:77598038-77598057 | MS.gene057207:intron | 45.0% | |
| ! | AAAATTTGGGTGCTCTGGGT+TGG | - | chr3.2:77600351-77600370 | MS.gene057207:CDS | 45.0% |
| !! | AGCTCTTTGGGATGGTTTAG+TGG | - | chr3.2:77598093-77598112 | MS.gene057207:intron | 45.0% |
| !! | AGTGTGTCTCCAATGGGTTT+TGG | - | chr3.2:77597111-77597130 | MS.gene057207:intron | 45.0% |
| !! | GCTTATAGTCCTCTAGGACT+TGG | - | chr3.2:77598922-77598941 | MS.gene057207:intron | 45.0% |
| !! | TTGGGGGTATCAAGAATCCA+TGG | - | chr3.2:77597161-77597180 | MS.gene057207:CDS | 45.0% |
| !!! | CTCCAATGGGTTTTGGAACT+TGG | - | chr3.2:77597118-77597137 | MS.gene057207:CDS | 45.0% |
| !!! | CTTGAGCTTTTGGTTTTGGG+TGG | + | chr3.2:77597079-77597098 | None:intergenic | 45.0% |
| ACCTCTGAGTGTGTCTCCAA+TGG | - | chr3.2:77597104-77597123 | MS.gene057207:intron | 50.0% | |
| CAACCACTTGCGCTAGACTT+TGG | - | chr3.2:77599480-77599499 | MS.gene057207:CDS | 50.0% | |
| CCAAACTTCCAACTGGACCA+AGG | - | chr3.2:77598971-77598990 | MS.gene057207:intron | 50.0% | |
| CCTCTGAGTGTGTCTCCAAT+GGG | - | chr3.2:77597105-77597124 | MS.gene057207:intron | 50.0% | |
| CCTTGGTCCAGTTGGAAGTT+TGG | + | chr3.2:77598974-77598993 | None:intergenic | 50.0% | |
| CTACCAAAGTCTAGCGCAAG+TGG | + | chr3.2:77599486-77599505 | None:intergenic | 50.0% | |
| CTTGCGCTAGACTTTGGTAG+TGG | - | chr3.2:77599486-77599505 | MS.gene057207:CDS | 50.0% | |
| GCCCAAGTTCCAAAACCCAT+TGG | + | chr3.2:77597123-77597142 | None:intergenic | 50.0% | |
| GCTCTTGTCAAACAAGTGCG+AGG | + | chr3.2:77599663-77599682 | None:intergenic | 50.0% | |
| GGGGTAATCAGCTTCTTTGG+GGG | - | chr3.2:77597145-77597164 | MS.gene057207:CDS | 50.0% | |
| TCAACACACCTTGGTCCAGT+TGG | + | chr3.2:77598982-77599001 | None:intergenic | 50.0% | |
| TGGAGCTCAGAACAAGGACA+CGG | + | chr3.2:77599880-77599899 | None:intergenic | 50.0% | |
| ! | AGTCTGCAACTTGTGCTGCT+GGG | + | chr3.2:77600583-77600602 | None:intergenic | 50.0% |
| ! | GAGGTCCCATCTTGAGCTTT+TGG | + | chr3.2:77597089-77597108 | None:intergenic | 50.0% |
| ! | GGCATTTGGAGCTCAGAACA+AGG | + | chr3.2:77599886-77599905 | None:intergenic | 50.0% |
| ! | TGGATGATGGCCATAGGGAA+GGG | + | chr3.2:77597059-77597078 | None:intergenic | 50.0% |
| ! | TTGGGTGGATGATGGCCATA+GGG | + | chr3.2:77597064-77597083 | None:intergenic | 50.0% |
| ! | TTTGGGTGGATGATGGCCAT+AGG | + | chr3.2:77597065-77597084 | None:intergenic | 50.0% |
| !! | CAAGTTCACCGGTTCTTGCT+AGG | - | chr3.2:77598266-77598285 | MS.gene057207:intron | 50.0% |
| !! | GGACAGTTATGTGGGTTGGT+TGG | + | chr3.2:77600156-77600175 | None:intergenic | 50.0% |
| !!! | GGGTTTTGGAACTTGGGCAT+GGG | - | chr3.2:77597125-77597144 | MS.gene057207:CDS | 50.0% |
| !!! | GGTTTTGGAACTTGGGCATG+GGG | - | chr3.2:77597126-77597145 | MS.gene057207:CDS | 50.0% |
| !!! | TGGGTTTTGGAACTTGGGCA+TGG | - | chr3.2:77597124-77597143 | MS.gene057207:CDS | 50.0% |
| AAAAGATGGGCCAAGCCTGC+AGG | + | chr3.2:77599765-77599784 | None:intergenic | 55.0% | |
| AAAGATGGGCCAAGCCTGCA+GGG | + | chr3.2:77599764-77599783 | None:intergenic | 55.0% | |
| AGTACACCTTCAGGCCCTTC+AGG | + | chr3.2:77599359-77599378 | None:intergenic | 55.0% | |
| AGTTCCGTTATGCTCAGCCC+AGG | - | chr3.2:77598441-77598460 | MS.gene057207:CDS | 55.0% | |
| ATCCATGGCGCCTTACACCA+GGG | - | chr3.2:77597869-77597888 | MS.gene057207:intron | 55.0% | |
| CAGTCTGCAACTTGTGCTGC+TGG | + | chr3.2:77600584-77600603 | None:intergenic | 55.0% | |
| CCCATTGGAGACACACTCAG+AGG | + | chr3.2:77597108-77597127 | None:intergenic | 55.0% | |
| CCTCAGAGAAAAAGGGGAGC+CGG | - | chr3.2:77597812-77597831 | MS.gene057207:intron | 55.0% | |
| TATCCATGGCGCCTTACACC+AGG | - | chr3.2:77597868-77597887 | MS.gene057207:intron | 55.0% | |
| ! | CTGAGCATAACGGAACTCCG+CGG | + | chr3.2:77598438-77598457 | None:intergenic | 55.0% |
| ! | GTCTGCAACTTGTGCTGCTG+GGG | + | chr3.2:77600582-77600601 | None:intergenic | 55.0% |
| ! | GTGGATGATGGCCATAGGGA+AGG | + | chr3.2:77597060-77597079 | None:intergenic | 55.0% |
| ! | TGCAGGCTTGGCCCATCTTT+TGG | - | chr3.2:77599764-77599783 | MS.gene057207:intron | 55.0% |
| AAAGGTAGGCCCTGCAGGCT+TGG | - | chr3.2:77599752-77599771 | MS.gene057207:intron | 60.0% | |
| ACCTTCAGGCCCTTCAGGCT+TGG | + | chr3.2:77599354-77599373 | None:intergenic | 60.0% | |
| CGACGAACTGCCCTGGTGTA+AGG | + | chr3.2:77597882-77597901 | None:intergenic | 60.0% | |
| GGCAGTTCGTCGATGCTTGC+AGG | - | chr3.2:77597890-77597909 | MS.gene057207:intron | 60.0% | |
| TCCAAGCCTGAAGGGCCTGA+AGG | - | chr3.2:77599350-77599369 | MS.gene057207:intron | 60.0% | |
| TTGGCAAAGGTAGGCCCTGC+AGG | - | chr3.2:77599747-77599766 | MS.gene057207:intron | 60.0% | |
| ! | CCGGCTCCCCTTTTTCTCTG+AGG | + | chr3.2:77597815-77597834 | None:intergenic | 60.0% |
| !! | CAAGCATCGACGAACTGCCC+TGG | + | chr3.2:77597889-77597908 | None:intergenic | 60.0% |
| CAGCACAGCAATCGCCTCGC+AGG | - | chr3.2:77600411-77600430 | MS.gene057207:CDS | 65.0% | |
| ! | TGCCCTGGTGTAAGGCGCCA+TGG | + | chr3.2:77597874-77597893 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 77596973 | 77600604 | 77596973 | ID=MS.gene057207 |
| chr3.2 | mRNA | 77596973 | 77600604 | 77596973 | ID=MS.gene057207.t1;Parent=MS.gene057207 |
| chr3.2 | exon | 77600256 | 77600604 | 77600256 | ID=MS.gene057207.t1.exon1;Parent=MS.gene057207.t1 |
| chr3.2 | CDS | 77600256 | 77600604 | 77600256 | ID=cds.MS.gene057207.t1;Parent=MS.gene057207.t1 |
| chr3.2 | exon | 77599666 | 77599759 | 77599666 | ID=MS.gene057207.t1.exon2;Parent=MS.gene057207.t1 |
| chr3.2 | CDS | 77599666 | 77599759 | 77599666 | ID=cds.MS.gene057207.t1;Parent=MS.gene057207.t1 |
| chr3.2 | exon | 77599448 | 77599571 | 77599448 | ID=MS.gene057207.t1.exon3;Parent=MS.gene057207.t1 |
| chr3.2 | CDS | 77599448 | 77599571 | 77599448 | ID=cds.MS.gene057207.t1;Parent=MS.gene057207.t1 |
| chr3.2 | exon | 77599115 | 77599216 | 77599115 | ID=MS.gene057207.t1.exon4;Parent=MS.gene057207.t1 |
| chr3.2 | CDS | 77599115 | 77599216 | 77599115 | ID=cds.MS.gene057207.t1;Parent=MS.gene057207.t1 |
| chr3.2 | exon | 77598585 | 77598736 | 77598585 | ID=MS.gene057207.t1.exon5;Parent=MS.gene057207.t1 |
| chr3.2 | CDS | 77598585 | 77598736 | 77598585 | ID=cds.MS.gene057207.t1;Parent=MS.gene057207.t1 |
| chr3.2 | exon | 77598381 | 77598474 | 77598381 | ID=MS.gene057207.t1.exon6;Parent=MS.gene057207.t1 |
| chr3.2 | CDS | 77598381 | 77598474 | 77598381 | ID=cds.MS.gene057207.t1;Parent=MS.gene057207.t1 |
| chr3.2 | exon | 77597118 | 77597299 | 77597118 | ID=MS.gene057207.t1.exon7;Parent=MS.gene057207.t1 |
| chr3.2 | CDS | 77597118 | 77597299 | 77597118 | ID=cds.MS.gene057207.t1;Parent=MS.gene057207.t1 |
| chr3.2 | exon | 77596973 | 77597006 | 77596973 | ID=MS.gene057207.t1.exon8;Parent=MS.gene057207.t1 |
| chr3.2 | CDS | 77596973 | 77597006 | 77596973 | ID=cds.MS.gene057207.t1;Parent=MS.gene057207.t1 |
| Gene Sequence |
| Protein sequence |
