Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062546.t1 | XP_024635331.1 | 91.8 | 416 | 6 | 2 | 1 | 388 | 1 | 416 | 6.00E-200 | 707.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062546.t1 | Q9LP45 | 80.0 | 409 | 53 | 3 | 8 | 388 | 6 | 413 | 2.4e-173 | 610.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062546.t1 | G7J2W0 | 91.8 | 416 | 6 | 2 | 1 | 388 | 250 | 665 | 4.3e-200 | 707.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene062546.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062546.t1 | MTR_3g109300 | 91.827 | 416 | 6 | 2 | 1 | 388 | 250 | 665 | 0.0 | 757 |
| MS.gene062546.t1 | MTR_1g009010 | 85.507 | 414 | 32 | 2 | 3 | 388 | 2 | 415 | 0.0 | 683 |
| MS.gene062546.t1 | MTR_3g109310 | 89.412 | 170 | 14 | 1 | 388 | 557 | 130 | 295 | 9.28e-103 | 311 |
| MS.gene062546.t1 | MTR_3g110010 | 81.890 | 127 | 23 | 0 | 387 | 513 | 632 | 758 | 4.98e-54 | 196 |
| MS.gene062546.t1 | MTR_3g109982 | 60.417 | 192 | 60 | 3 | 338 | 513 | 583 | 774 | 8.36e-54 | 195 |
| MS.gene062546.t1 | MTR_1g008990 | 57.051 | 156 | 60 | 5 | 403 | 557 | 190 | 339 | 7.64e-44 | 159 |
| MS.gene062546.t1 | MTR_1g008990 | 74.074 | 54 | 14 | 0 | 403 | 456 | 190 | 243 | 1.40e-17 | 83.2 |
| MS.gene062546.t1 | MTR_1g080920 | 48.387 | 93 | 44 | 2 | 402 | 494 | 228 | 316 | 2.53e-15 | 78.6 |
| MS.gene062546.t1 | MTR_7g087530 | 22.872 | 376 | 244 | 9 | 14 | 351 | 33 | 400 | 5.41e-15 | 77.8 |
| MS.gene062546.t1 | MTR_7g115120 | 54.286 | 70 | 30 | 1 | 402 | 471 | 213 | 280 | 6.30e-14 | 73.9 |
| MS.gene062546.t1 | MTR_7g115140 | 47.826 | 69 | 36 | 0 | 388 | 456 | 138 | 206 | 5.99e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062546.t1 | AT1G29150 | 79.951 | 409 | 53 | 3 | 8 | 388 | 6 | 413 | 0.0 | 625 |
| MS.gene062546.t1 | AT1G29150 | 79.951 | 409 | 53 | 3 | 8 | 388 | 6 | 413 | 0.0 | 625 |
| MS.gene062546.t1 | AT5G24800 | 46.243 | 173 | 72 | 7 | 387 | 557 | 124 | 277 | 3.10e-30 | 120 |
| MS.gene062546.t1 | AT5G28770 | 49.462 | 93 | 43 | 2 | 402 | 494 | 171 | 259 | 3.48e-15 | 77.0 |
| MS.gene062546.t1 | AT5G28770 | 49.462 | 93 | 43 | 2 | 402 | 494 | 164 | 252 | 3.83e-15 | 77.0 |
| MS.gene062546.t1 | AT5G28770 | 57.143 | 56 | 24 | 0 | 402 | 457 | 171 | 226 | 1.73e-11 | 65.1 |
Find 120 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGCTTTGACTCTTCTTTC+TGG | 0.060830 | 8.1:+44244496 | MS.gene062546:CDS |
| GAAGATGTCTCAGATGATTT+TGG | 0.221126 | 8.1:+44245148 | MS.gene062546:CDS |
| AACACTATACAAACAGTTTA+TGG | 0.233451 | 8.1:+44246644 | MS.gene062546:CDS |
| TACACAACAACATATATTTC+AGG | 0.264578 | 8.1:-44244809 | None:intergenic |
| CTTAGGAATCAAAGAGAAAA+AGG | 0.267105 | 8.1:-44244287 | None:intergenic |
| GTGCGCAATTCGAATCTTGC+TGG | 0.282423 | 8.1:+44247029 | MS.gene062546:CDS |
| AAGCTTTGACTCTTCTTTCT+GGG | 0.296786 | 8.1:+44244497 | MS.gene062546:CDS |
| CTATGAGTGGTGTAACTATT+TGG | 0.306445 | 8.1:+44247111 | MS.gene062546:CDS |
| TCTTGCTGGGTTTGGAAACT+TGG | 0.308532 | 8.1:+44247043 | MS.gene062546:CDS |
| CAAGAAGTTTGCTGGGACAT+TGG | 0.347751 | 8.1:+44245172 | MS.gene062546:CDS |
| AATTCGAATCTTGCTGGGTT+TGG | 0.349242 | 8.1:+44247035 | MS.gene062546:CDS |
| ACCTTCTCAGGCAAGAGAAC+AGG | 0.350066 | 8.1:+44244227 | MS.gene062546:CDS |
| TCTTTCATACGCAGAGCTTC+TGG | 0.357829 | 8.1:-44244181 | None:intergenic |
| GAAATGGTCTCTAAAGTTGC+AGG | 0.361989 | 8.1:-44245251 | None:intergenic |
| ATCCCTGTATGATACCCTTC+TGG | 0.369495 | 8.1:+44245031 | MS.gene062546:CDS |
| TGGTTGACAGTCTTTATGTT+AGG | 0.381996 | 8.1:+44245288 | MS.gene062546:CDS |
| CACTTTCCCAACATTGGAAA+TGG | 0.391471 | 8.1:-44245267 | None:intergenic |
| ATTTCCCTGCAGGACATTGA+TGG | 0.395593 | 8.1:-44246976 | None:intergenic |
| GAAATGTGTCTGTGAACAAT+TGG | 0.398724 | 8.1:-44245008 | None:intergenic |
| CTGGGTTGGTCAAAGAGGTT+AGG | 0.401504 | 8.1:+44244515 | MS.gene062546:CDS |
| TAGAGACCATTTCCAATGTT+GGG | 0.407846 | 8.1:+44245261 | MS.gene062546:CDS |
| TTCCGCTCAACGTGATCAAT+TGG | 0.408482 | 8.1:-44245128 | None:intergenic |
| ATGTGGCATGCGGCGAATAC+TGG | 0.408973 | 8.1:-44246943 | None:intergenic |
| ACAATGATGTTGTCGACAAT+GGG | 0.410740 | 8.1:+44247075 | MS.gene062546:CDS |
| TTTGACTCTTCTTTCTGGGT+TGG | 0.413470 | 8.1:+44244501 | MS.gene062546:CDS |
| CAGGACTACAAGGCACAGTT+GGG | 0.423474 | 8.1:+44244978 | MS.gene062546:CDS |
| GGTGAAGTTAGCTGAGGATA+TGG | 0.427027 | 8.1:+44246830 | MS.gene062546:intron |
| TTCTGGAGCAGAATCTTTGT+AGG | 0.427259 | 8.1:+44245048 | MS.gene062546:CDS |
| GGGTATATTGCATCAGTCTT+GGG | 0.434505 | 8.1:-44245230 | None:intergenic |
| CATTTCCAATGTTGGGAAAG+TGG | 0.438184 | 8.1:+44245268 | MS.gene062546:CDS |
| CCCTGTTCTCTTGCCTGAGA+AGG | 0.446003 | 8.1:-44244228 | None:intergenic |
| AACCGCAACACCACCGTATG+AGG | 0.448822 | 8.1:-44247003 | None:intergenic |
| TTGGTCTGAACTTGAGTCTC+AGG | 0.450575 | 8.1:+44246373 | MS.gene062546:CDS |
| CAAATCTTACTGACCTTCTC+AGG | 0.450662 | 8.1:+44244215 | MS.gene062546:CDS |
| AGGGTATATTGCATCAGTCT+TGG | 0.452702 | 8.1:-44245231 | None:intergenic |
| TTCAGGCTGAAAATAGCCTT+AGG | 0.454754 | 8.1:-44244792 | None:intergenic |
| GGAATTATTTCTTCTAAAGC+AGG | 0.456178 | 8.1:+44244864 | MS.gene062546:CDS |
| GATTTCACTGTGTAAAGAAA+TGG | 0.466235 | 8.1:+44244381 | MS.gene062546:CDS |
| GGATTCAATTGCTCAGGCAT+TGG | 0.471759 | 8.1:+44244093 | MS.gene062546:CDS |
| ATCAAGTACACGATAAAGAA+TGG | 0.473844 | 8.1:-44244143 | None:intergenic |
| GCTCCAGAAGGGTATCATAC+AGG | 0.475823 | 8.1:-44245034 | None:intergenic |
| GCCAACCATCAATGTCCTGC+AGG | 0.476677 | 8.1:+44246971 | MS.gene062546:CDS |
| AAAGCAGGATTGCAATATGT+TGG | 0.477736 | 8.1:+44244879 | MS.gene062546:CDS |
| TGCGCAATTCGAATCTTGCT+GGG | 0.480163 | 8.1:+44247030 | MS.gene062546:CDS |
| GCTTTCATCGCATCCAAGTC+AGG | 0.487211 | 8.1:-44244903 | None:intergenic |
| TTAGAGACCATTTCCAATGT+TGG | 0.488579 | 8.1:+44245260 | MS.gene062546:CDS |
| GTCAACCACTTTCCCAACAT+TGG | 0.489301 | 8.1:-44245273 | None:intergenic |
| GCAGGACTACAAGGCACAGT+TGG | 0.489808 | 8.1:+44244977 | MS.gene062546:CDS |
| TTCAATTGCTCAGGCATTGG+AGG | 0.497862 | 8.1:+44244096 | MS.gene062546:CDS |
| AAGCAGGATTGCAATATGTT+GGG | 0.498799 | 8.1:+44244880 | MS.gene062546:CDS |
| AACTGCTTTGCAGGACTACA+AGG | 0.501162 | 8.1:+44244968 | MS.gene062546:CDS |
| CCCTGCAGGACATTGATGGT+TGG | 0.501779 | 8.1:-44246972 | None:intergenic |
| TACAATGATGTTGTCGACAA+TGG | 0.508346 | 8.1:+44247074 | MS.gene062546:CDS |
| ATTGAATATAACGAGGCATC+CGG | 0.509500 | 8.1:-44245204 | None:intergenic |
| CAATGCTCTTGAAGACCCTA+AGG | 0.511010 | 8.1:+44244776 | MS.gene062546:CDS |
| GCAATATGTTGGGCCTGACT+TGG | 0.511624 | 8.1:+44244890 | MS.gene062546:CDS |
| CCTTCTCAGGCAAGAGAACA+GGG | 0.514248 | 8.1:+44244228 | MS.gene062546:CDS |
| TTGTCGACAACATCATTGTA+AGG | 0.519538 | 8.1:-44247071 | None:intergenic |
| TCAGGCTGAAAATAGCCTTA+GGG | 0.519784 | 8.1:-44244791 | None:intergenic |
| GCAATCTCAACTCTTGAGAA+TGG | 0.520686 | 8.1:-44245080 | None:intergenic |
| GCAATTGAATCCGTTGTGGC+AGG | 0.520844 | 8.1:-44244082 | None:intergenic |
| GACTCAGTTGCTAAAATACC+AGG | 0.527380 | 8.1:+44244343 | MS.gene062546:CDS |
| CACAACGGATTCAATTGCTC+AGG | 0.533092 | 8.1:+44244087 | MS.gene062546:CDS |
| AAGAGCATTGAAAGACTCAA+AGG | 0.538169 | 8.1:-44244763 | None:intergenic |
| TGTAGAAGCTTTGAGAGCTA+AGG | 0.540256 | 8.1:+44246722 | MS.gene062546:CDS |
| AGCTCTGCGTATGAAAGAGC+AGG | 0.542904 | 8.1:+44244186 | MS.gene062546:CDS |
| CTCCAGAAGGGTATCATACA+GGG | 0.544409 | 8.1:-44245033 | None:intergenic |
| ATGAGGCACTATTTCCCTGC+AGG | 0.545708 | 8.1:-44246986 | None:intergenic |
| CACCACTCATAGCATTGCTT+AGG | 0.546328 | 8.1:-44247100 | None:intergenic |
| AGAGCTTCTGGTGAAGAAGA+TGG | 0.548989 | 8.1:-44244169 | None:intergenic |
| TATGTTGTTGTGTAAGATCA+TGG | 0.550906 | 8.1:+44244818 | MS.gene062546:CDS |
| TCTTTCTGGGTTGGTCAAAG+AGG | 0.554089 | 8.1:+44244510 | MS.gene062546:CDS |
| TTTGCTGGGACATTGGATCA+AGG | 0.555668 | 8.1:+44245179 | MS.gene062546:CDS |
| AAATGTGTCTGTGAACAATT+GGG | 0.557966 | 8.1:-44245007 | None:intergenic |
| AGAATGGATCTCGCATCAGA+AGG | 0.560828 | 8.1:-44244127 | None:intergenic |
| ATCTGTAGATCAGATGTCCC+TGG | 0.569702 | 8.1:-44244361 | None:intergenic |
| TACAAAGATTCTGCTCCAGA+AGG | 0.569886 | 8.1:-44245046 | None:intergenic |
| GCGAGTCAGCCAAGAGGTCA+AGG | 0.571020 | 8.1:+44246333 | MS.gene062546:CDS |
| AAACTGATTGTTTAGTGATG+TGG | 0.571542 | 8.1:-44246871 | None:intergenic |
| CAGGGAAATAGTGCCTCATA+CGG | 0.572012 | 8.1:+44246990 | MS.gene062546:CDS |
| TTCCAATTGATCACGTTGAG+CGG | 0.579853 | 8.1:+44245126 | MS.gene062546:CDS |
| GAATGGATCTCGCATCAGAA+GGG | 0.580110 | 8.1:-44244126 | None:intergenic |
| GGGACATTGGATCAAGGTGC+CGG | 0.586404 | 8.1:+44245185 | MS.gene062546:CDS |
| GCAGCCTTCTCACTTCATTG+AGG | 0.586407 | 8.1:+44244263 | MS.gene062546:CDS |
| CTCATTAAGAAACCTTCCAA+AGG | 0.587775 | 8.1:+44244594 | MS.gene062546:CDS |
| TCATACGGTGGTGTTGCGGT+TGG | 0.590129 | 8.1:+44247005 | MS.gene062546:CDS |
| AGCTGTTCTAGCAGCCGTGA+GGG | 0.592486 | 8.1:-44244626 | None:intergenic |
| CAGGCAAGAGAACAGGGGAG+AGG | 0.594061 | 8.1:+44244234 | MS.gene062546:CDS |
| ATCTTATCTTCCTGCCACAA+CGG | 0.596364 | 8.1:+44244072 | MS.gene062546:CDS |
| TGCCTCATACGGTGGTGTTG+CGG | 0.602335 | 8.1:+44247001 | MS.gene062546:CDS |
| AAGGTCAGTAAGATTTGTGA+TGG | 0.606087 | 8.1:-44244209 | None:intergenic |
| AGGGCCTCAATGAAGTGAGA+AGG | 0.611750 | 8.1:-44244267 | None:intergenic |
| ACAAAGATTCTGCTCCAGAA+GGG | 0.620348 | 8.1:-44245045 | None:intergenic |
| GGAAATAGTGCCTCATACGG+TGG | 0.626744 | 8.1:+44246993 | MS.gene062546:CDS |
| AAAACTGCAAAGATTGTAAG+GGG | 0.631797 | 8.1:+44244313 | MS.gene062546:CDS |
| CAGCTGTTCTAGCAGCCGTG+AGG | 0.638157 | 8.1:-44244627 | None:intergenic |
| AAATGGTCTCTAAAGTTGCA+GGG | 0.639902 | 8.1:-44245250 | None:intergenic |
| CCAACCATCAATGTCCTGCA+GGG | 0.644784 | 8.1:+44246972 | MS.gene062546:CDS |
| GGTGGAGAAAACAAGCACAT+TGG | 0.651702 | 8.1:+44246354 | MS.gene062546:CDS |
| GGTGAATCAAGCTGATGATG+TGG | 0.654166 | 8.1:+44244839 | MS.gene062546:CDS |
| TACTAGTCAACAATTTCATG+AGG | 0.659476 | 8.1:+44246668 | MS.gene062546:CDS |
| ATAATAGGTGAAGTTAGCTG+AGG | 0.671237 | 8.1:+44246824 | MS.gene062546:intron |
| AAAGGCAAAAGCTTCCCTCA+CGG | 0.672986 | 8.1:+44244612 | MS.gene062546:CDS |
| AGGAAGATAAGATGTAGACA+TGG | 0.676910 | 8.1:-44244062 | None:intergenic |
| GTGAATCAAGCTGATGATGT+GGG | 0.683700 | 8.1:+44244840 | MS.gene062546:CDS |
| GTCCTAAGCAATGCTATGAG+TGG | 0.683900 | 8.1:+44247098 | MS.gene062546:CDS |
| AGTCAGCCAAGAGGTCAAGG+TGG | 0.684615 | 8.1:+44246336 | MS.gene062546:CDS |
| AATCAAGCTGATGATGTGGG+TGG | 0.686446 | 8.1:+44244843 | MS.gene062546:CDS |
| AGGACTACAAGGCACAGTTG+GGG | 0.686447 | 8.1:+44244979 | MS.gene062546:CDS |
| GGACTACAAGGCACAGTTGG+GGG | 0.689123 | 8.1:+44244980 | MS.gene062546:CDS |
| CTGAGCAATTGAATCCGTTG+TGG | 0.699339 | 8.1:-44244086 | None:intergenic |
| CTGGTAGTCATGTTGAGTTG+TGG | 0.702154 | 8.1:-44246924 | None:intergenic |
| TGTGTAAAGAAATGGTGCAG+TGG | 0.703348 | 8.1:+44244389 | MS.gene062546:CDS |
| CTTCTCAGGCAAGAGAACAG+GGG | 0.711755 | 8.1:+44244229 | MS.gene062546:CDS |
| CTAATTGCGAGTCAGCCAAG+AGG | 0.711883 | 8.1:+44246327 | MS.gene062546:CDS |
| ACTCAGTTGCTAAAATACCA+GGG | 0.713806 | 8.1:+44244344 | MS.gene062546:CDS |
| CAATGATGTTGTCGACAATG+GGG | 0.725562 | 8.1:+44247076 | MS.gene062546:CDS |
| TTGGCGAAACATGTGGCATG+CGG | 0.727060 | 8.1:-44246953 | None:intergenic |
| TTGATGGTTGGCGAAACATG+TGG | 0.736785 | 8.1:-44246960 | None:intergenic |
| TGGGATCATTGAATATAACG+AGG | 0.749025 | 8.1:-44245211 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTAAAATTACATGTA+TGG | - | chr8.1:44245698-44245717 | None:intergenic | 10.0% |
| !! | TGATGTCATAATATAAATTA+TGG | + | chr8.1:44245844-44245863 | MS.gene062546:intron | 15.0% |
| !! | TTTACATATGCTATTATAAT+AGG | + | chr8.1:44246809-44246828 | MS.gene062546:intron | 15.0% |
| !!! | ATATGATTAATTTGAATGAT+TGG | + | chr8.1:44245889-44245908 | MS.gene062546:intron | 15.0% |
| !!! | TATGATTAATTTGAATGATT+GGG | + | chr8.1:44245890-44245909 | MS.gene062546:intron | 15.0% |
| !! | ATGACGTTTAAATAACTAAA+CGG | - | chr8.1:44245987-44246006 | None:intergenic | 20.0% |
| !! | ATGATGTTCAGAATAATTAA+CGG | - | chr8.1:44246019-44246038 | None:intergenic | 20.0% |
| !! | GAAACAAAAAAAAGATATGA+AGG | - | chr8.1:44245612-44245631 | None:intergenic | 20.0% |
| !!! | AACTTAACTAATCAATGTTT+TGG | + | chr8.1:44246397-44246416 | MS.gene062546:intron | 20.0% |
| !!! | AATTTAGTTTCTGAAATTGT+AGG | + | chr8.1:44246428-44246447 | MS.gene062546:intron | 20.0% |
| !!! | ACAACACTTTTTATTATATG+TGG | + | chr8.1:44246251-44246270 | MS.gene062546:intron | 20.0% |
| !!! | ACTTTTTATTATATGTGGTT+TGG | + | chr8.1:44246256-44246275 | MS.gene062546:intron | 20.0% |
| !!! | TCTTTTTTTTGTTTCTCTAT+CGG | + | chr8.1:44245617-44245636 | MS.gene062546:intron | 20.0% |
| ! | AAAAACTGCAAAGATTGTAA+GGG | + | chr8.1:44244312-44244331 | MS.gene062546:CDS | 25.0% |
| ! | AACACTATACAAACAGTTTA+TGG | + | chr8.1:44246644-44246663 | MS.gene062546:CDS | 25.0% |
| ! | AATTTGTGTACCTTTGAATT+AGG | - | chr8.1:44246124-44246143 | None:intergenic | 25.0% |
| ! | AGAATAATTAACGGTCTAAT+GGG | - | chr8.1:44246010-44246029 | None:intergenic | 25.0% |
| ! | AGATCACTAGATACAAATTA+TGG | - | chr8.1:44246176-44246195 | None:intergenic | 25.0% |
| ! | ATTGAGTCGAATGTTTAAAA+GGG | + | chr8.1:44245436-44245455 | MS.gene062546:intron | 25.0% |
| ! | CATATCATCAATAATAGAGA+AGG | - | chr8.1:44246153-44246172 | None:intergenic | 25.0% |
| ! | TACACAACAACATATATTTC+AGG | - | chr8.1:44244812-44244831 | None:intergenic | 25.0% |
| ! | TATTGAGTCGAATGTTTAAA+AGG | + | chr8.1:44245435-44245454 | MS.gene062546:intron | 25.0% |
| ! | TGAGAGATCAAAATTCAAAT+GGG | - | chr8.1:44246597-44246616 | None:intergenic | 25.0% |
| ! | TTAAATAACTAAACGGTTGA+GGG | - | chr8.1:44245980-44245999 | None:intergenic | 25.0% |
| ! | TTAGGAATCAAAGAGAAAAA+GGG | - | chr8.1:44244289-44244308 | None:intergenic | 25.0% |
| ! | TTTAAATAACTAAACGGTTG+AGG | - | chr8.1:44245981-44246000 | None:intergenic | 25.0% |
| !! | TAATTCTGAGAGAAAATTCT+AGG | + | chr8.1:44246492-44246511 | MS.gene062546:intron | 25.0% |
| !!! | AAGCTTACTTCTTTTTTGAA+TGG | + | chr8.1:44245660-44245679 | MS.gene062546:intron | 25.0% |
| !!! | TTTTAATTAGGTGTTCTCTT+TGG | + | chr8.1:44245495-44245514 | MS.gene062546:intron | 25.0% |
| AAAACTGCAAAGATTGTAAG+GGG | + | chr8.1:44244313-44244332 | MS.gene062546:CDS | 30.0% | |
| AAACTGATTGTTTAGTGATG+TGG | - | chr8.1:44246874-44246893 | None:intergenic | 30.0% | |
| AAATGATATACCAGTCAGAA+TGG | - | chr8.1:44245385-44245404 | None:intergenic | 30.0% | |
| AAATGTGTCTGTGAACAATT+GGG | - | chr8.1:44245010-44245029 | None:intergenic | 30.0% | |
| AAGCAGTTTCGAAAAACTTA+AGG | - | chr8.1:44244956-44244975 | None:intergenic | 30.0% | |
| AATGTTTAAAAGGGCTTATG+CGG | + | chr8.1:44245445-44245464 | MS.gene062546:intron | 30.0% | |
| AGCAGTTTCGAAAAACTTAA+GGG | - | chr8.1:44244955-44244974 | None:intergenic | 30.0% | |
| ATCAAGTACACGATAAAGAA+TGG | - | chr8.1:44244146-44244165 | None:intergenic | 30.0% | |
| ATTGGGCTATTGTTACTAAA+TGG | + | chr8.1:44245907-44245926 | MS.gene062546:intron | 30.0% | |
| ATTTAGATAAGCTCAATGAG+AGG | + | chr8.1:44245948-44245967 | MS.gene062546:intron | 30.0% | |
| CAAAAACTGCAAAGATTGTA+AGG | + | chr8.1:44244311-44244330 | MS.gene062546:CDS | 30.0% | |
| CAGAATAATTAACGGTCTAA+TGG | - | chr8.1:44246011-44246030 | None:intergenic | 30.0% | |
| CATGCTTCAATTGAAATAGT+AGG | - | chr8.1:44246521-44246540 | None:intergenic | 30.0% | |
| CTGAGAGATCAAAATTCAAA+TGG | - | chr8.1:44246598-44246617 | None:intergenic | 30.0% | |
| CTTAGGAATCAAAGAGAAAA+AGG | - | chr8.1:44244290-44244309 | None:intergenic | 30.0% | |
| GATTTCACTGTGTAAAGAAA+TGG | + | chr8.1:44244381-44244400 | MS.gene062546:CDS | 30.0% | |
| TACTAGTCAACAATTTCATG+AGG | + | chr8.1:44246668-44246687 | MS.gene062546:CDS | 30.0% | |
| TATGTTGTTGTGTAAGATCA+TGG | + | chr8.1:44244818-44244837 | MS.gene062546:CDS | 30.0% | |
| TCTCATTGAGCTTATCTAAA+TGG | - | chr8.1:44245949-44245968 | None:intergenic | 30.0% | |
| TGATATAATGATTCCTGACA+TGG | + | chr8.1:44246290-44246309 | MS.gene062546:intron | 30.0% | |
| ! | CTTTTTCTCTTTGATTCCTA+AGG | + | chr8.1:44244288-44244307 | MS.gene062546:CDS | 30.0% |
| ! | TAGTTTCCTTTGAACCTTTT+CGG | + | chr8.1:44245408-44245427 | MS.gene062546:intron | 30.0% |
| !! | CATTTGAATTTTGATCTCTC+AGG | + | chr8.1:44246596-44246615 | MS.gene062546:intron | 30.0% |
| !! | GGAATTATTTCTTCTAAAGC+AGG | + | chr8.1:44244864-44244883 | MS.gene062546:CDS | 30.0% |
| AAAGCAGGATTGCAATATGT+TGG | + | chr8.1:44244879-44244898 | MS.gene062546:CDS | 35.0% | |
| AAGCAGGATTGCAATATGTT+GGG | + | chr8.1:44244880-44244899 | MS.gene062546:CDS | 35.0% | |
| AAGGTCAGTAAGATTTGTGA+TGG | - | chr8.1:44244212-44244231 | None:intergenic | 35.0% | |
| AATTAAAATCACACCCTTCC+TGG | - | chr8.1:44245483-44245502 | None:intergenic | 35.0% | |
| AATTAGGTGTTCTCTTTGGT+TGG | + | chr8.1:44245499-44245518 | MS.gene062546:intron | 35.0% | |
| ACAATGATGTTGTCGACAAT+GGG | + | chr8.1:44247075-44247094 | MS.gene062546:CDS | 35.0% | |
| ACTCAGTTGCTAAAATACCA+GGG | + | chr8.1:44244344-44244363 | MS.gene062546:CDS | 35.0% | |
| ATAATAGGTGAAGTTAGCTG+AGG | + | chr8.1:44246824-44246843 | MS.gene062546:intron | 35.0% | |
| CACAATTTGATATCTCATGC+AGG | + | chr8.1:44246454-44246473 | MS.gene062546:intron | 35.0% | |
| CCTTCATCAACCTAATTCAA+AGG | + | chr8.1:44246111-44246130 | MS.gene062546:intron | 35.0% | |
| CTATGAGTGGTGTAACTATT+TGG | + | chr8.1:44247111-44247130 | MS.gene062546:CDS | 35.0% | |
| CTCATTAAGAAACCTTCCAA+AGG | + | chr8.1:44244594-44244613 | MS.gene062546:CDS | 35.0% | |
| GAAATGTGTCTGTGAACAAT+TGG | - | chr8.1:44245011-44245030 | None:intergenic | 35.0% | |
| TACAATGATGTTGTCGACAA+TGG | + | chr8.1:44247074-44247093 | MS.gene062546:CDS | 35.0% | |
| TAGAGACCATTTCCAATGTT+GGG | + | chr8.1:44245261-44245280 | MS.gene062546:CDS | 35.0% | |
| TGGGATCATTGAATATAACG+AGG | - | chr8.1:44245214-44245233 | None:intergenic | 35.0% | |
| TGGTTGACAGTCTTTATGTT+AGG | + | chr8.1:44245288-44245307 | MS.gene062546:CDS | 35.0% | |
| TGTGAAAACCTAAAGCTAGA+CGG | + | chr8.1:44246039-44246058 | MS.gene062546:intron | 35.0% | |
| TTAGAGACCATTTCCAATGT+TGG | + | chr8.1:44245260-44245279 | MS.gene062546:CDS | 35.0% | |
| TTGTCGACAACATCATTGTA+AGG | - | chr8.1:44247074-44247093 | None:intergenic | 35.0% | |
| ! | AAGCTTTGACTCTTCTTTCT+GGG | + | chr8.1:44244497-44244516 | MS.gene062546:CDS | 35.0% |
| ! | AGCACTTTTGATGGAAACTA+AGG | + | chr8.1:44244465-44244484 | MS.gene062546:CDS | 35.0% |
| ! | AGTTTCCTTTGAACCTTTTC+GGG | + | chr8.1:44245409-44245428 | MS.gene062546:intron | 35.0% |
| ! | ATCTTTGCAGTTTTTGCCTT+AGG | - | chr8.1:44244307-44244326 | None:intergenic | 35.0% |
| ! | ATTGAATATAACGAGGCATC+CGG | - | chr8.1:44245207-44245226 | None:intergenic | 35.0% |
| ! | ATTGAGTATTGTCATCCAAG+TGG | + | chr8.1:44245757-44245776 | MS.gene062546:intron | 35.0% |
| ! | ATTTTGGACAAGAAGTTTGC+TGG | + | chr8.1:44245164-44245183 | MS.gene062546:CDS | 35.0% |
| ! | GAAGATGTCTCAGATGATTT+TGG | + | chr8.1:44245148-44245167 | MS.gene062546:CDS | 35.0% |
| ! | GGAAAACCACTCTCATTTTA+TGG | + | chr8.1:44245552-44245571 | MS.gene062546:intron | 35.0% |
| ! | GTTTTCTTTTCCATTCTGAC+TGG | + | chr8.1:44245372-44245391 | MS.gene062546:intron | 35.0% |
| ! | TATTCCACTCTGAAGATCTA+TGG | - | chr8.1:44244691-44244710 | None:intergenic | 35.0% |
| ! | TTGAGTATTGTCATCCAAGT+GGG | + | chr8.1:44245758-44245777 | MS.gene062546:intron | 35.0% |
| !! | AAATGGTCTCTAAAGTTGCA+GGG | - | chr8.1:44245253-44245272 | None:intergenic | 35.0% |
| !! | AAGAGCATTGAAAGACTCAA+AGG | - | chr8.1:44244766-44244785 | None:intergenic | 35.0% |
| !! | CCTTTGAATTAGGTTGATGA+AGG | - | chr8.1:44246114-44246133 | None:intergenic | 35.0% |
| !! | CTACATCTGATTTTAGCACT+CGG | - | chr8.1:44246707-44246726 | None:intergenic | 35.0% |
| !! | TTTTGGACAAGAAGTTTGCT+GGG | + | chr8.1:44245165-44245184 | MS.gene062546:CDS | 35.0% |
| !!! | GGAAGGGTGTGATTTTAATT+AGG | + | chr8.1:44245483-44245502 | MS.gene062546:intron | 35.0% |
| AACAGCAAGTAATGTAGCAC+TGG | - | chr8.1:44245355-44245374 | None:intergenic | 40.0% | |
| AATACTTCATGCTGAGGAGA+AGG | + | chr8.1:44244707-44244726 | MS.gene062546:intron | 40.0% | |
| AATTCGAATCTTGCTGGGTT+TGG | + | chr8.1:44247035-44247054 | MS.gene062546:CDS | 40.0% | |
| ACAAAGATTCTGCTCCAGAA+GGG | - | chr8.1:44245048-44245067 | None:intergenic | 40.0% | |
| AGGGTATATTGCATCAGTCT+TGG | - | chr8.1:44245234-44245253 | None:intergenic | 40.0% | |
| ATAGTTGTCGACGTTGTCTA+CGG | + | chr8.1:44246084-44246103 | MS.gene062546:intron | 40.0% | |
| ATCTTATCTTCCTGCCACAA+CGG | + | chr8.1:44244072-44244091 | MS.gene062546:CDS | 40.0% | |
| ATTCCTGACATGGTTTCAGA+AGG | + | chr8.1:44246300-44246319 | MS.gene062546:intron | 40.0% | |
| CAAATCTTACTGACCTTCTC+AGG | + | chr8.1:44244215-44244234 | MS.gene062546:CDS | 40.0% | |
| CAATGATGTTGTCGACAATG+GGG | + | chr8.1:44247076-44247095 | MS.gene062546:CDS | 40.0% | |
| CACTTTCCCAACATTGGAAA+TGG | - | chr8.1:44245270-44245289 | None:intergenic | 40.0% | |
| CATTTCCAATGTTGGGAAAG+TGG | + | chr8.1:44245268-44245287 | MS.gene062546:CDS | 40.0% | |
| GACTCAGTTGCTAAAATACC+AGG | + | chr8.1:44244343-44244362 | MS.gene062546:CDS | 40.0% | |
| GCAATCTCAACTCTTGAGAA+TGG | - | chr8.1:44245083-44245102 | None:intergenic | 40.0% | |
| GGGTATATTGCATCAGTCTT+GGG | - | chr8.1:44245233-44245252 | None:intergenic | 40.0% | |
| GTGTTATGAAGAACCAGGAA+GGG | + | chr8.1:44245467-44245486 | MS.gene062546:intron | 40.0% | |
| GTTACTAAATGGACCGTGAT+GGG | + | chr8.1:44245918-44245937 | MS.gene062546:intron | 40.0% | |
| GTTGAGATGCGAGGATAAAA+GGG | + | chr8.1:44245521-44245540 | MS.gene062546:intron | 40.0% | |
| TAACACCCGAAAAGGTTCAA+AGG | - | chr8.1:44245417-44245436 | None:intergenic | 40.0% | |
| TAATCCAACAATCTCCCACT+TGG | - | chr8.1:44245775-44245794 | None:intergenic | 40.0% | |
| TACAAAGATTCTGCTCCAGA+AGG | - | chr8.1:44245049-44245068 | None:intergenic | 40.0% | |
| TGTGAGCCATAAAATGAGAG+TGG | - | chr8.1:44245561-44245580 | None:intergenic | 40.0% | |
| TGTGTAAAGAAATGGTGCAG+TGG | + | chr8.1:44244389-44244408 | MS.gene062546:CDS | 40.0% | |
| TGTTACTAAATGGACCGTGA+TGG | + | chr8.1:44245917-44245936 | MS.gene062546:intron | 40.0% | |
| TTCAGGCTGAAAATAGCCTT+AGG | - | chr8.1:44244795-44244814 | None:intergenic | 40.0% | |
| TTCCAATTGATCACGTTGAG+CGG | + | chr8.1:44245126-44245145 | MS.gene062546:CDS | 40.0% | |
| TTCCTGACATGGTTTCAGAA+GGG | + | chr8.1:44246301-44246320 | MS.gene062546:intron | 40.0% | |
| TTGAGATGCGAGGATAAAAG+GGG | + | chr8.1:44245522-44245541 | MS.gene062546:intron | 40.0% | |
| TTTGACTCTTCTTTCTGGGT+TGG | + | chr8.1:44244501-44244520 | MS.gene062546:CDS | 40.0% | |
| ! | AAGACTTGCAGCACTTTTGA+TGG | + | chr8.1:44244456-44244475 | MS.gene062546:CDS | 40.0% |
| ! | ACTCTCATTTTATGGCTCAC+AGG | + | chr8.1:44245560-44245579 | MS.gene062546:intron | 40.0% |
| ! | ATTTTATGGCTCACAGGAGA+TGG | + | chr8.1:44245566-44245585 | MS.gene062546:intron | 40.0% |
| ! | GAAGCTTTGACTCTTCTTTC+TGG | + | chr8.1:44244496-44244515 | MS.gene062546:CDS | 40.0% |
| ! | GTGAATCAAGCTGATGATGT+GGG | + | chr8.1:44244840-44244859 | MS.gene062546:CDS | 40.0% |
| ! | TCAGGCTGAAAATAGCCTTA+GGG | - | chr8.1:44244794-44244813 | None:intergenic | 40.0% |
| !! | CTGAAAAGCGTACTTTTCTG+AGG | + | chr8.1:44244419-44244438 | MS.gene062546:CDS | 40.0% |
| !! | GAAATGGTCTCTAAAGTTGC+AGG | - | chr8.1:44245254-44245273 | None:intergenic | 40.0% |
| !! | GTTTTTCGAAACTGCTTTGC+AGG | + | chr8.1:44244959-44244978 | MS.gene062546:CDS | 40.0% |
| !! | TCAGGTTGAAAAACTGACAC+TGG | + | chr8.1:44246614-44246633 | MS.gene062546:intron | 40.0% |
| !! | TGTAGAAGCTTTGAGAGCTA+AGG | + | chr8.1:44246722-44246741 | MS.gene062546:CDS | 40.0% |
| !! | TTCTGGAGCAGAATCTTTGT+AGG | + | chr8.1:44245048-44245067 | MS.gene062546:CDS | 40.0% |
| !!! | TTTTCTGAGGCAACGAATTG+AGG | + | chr8.1:44244432-44244451 | MS.gene062546:CDS | 40.0% |
| AAAGGCAAAAGCTTCCCTCA+CGG | + | chr8.1:44244612-44244631 | MS.gene062546:CDS | 45.0% | |
| AACTGCTTTGCAGGACTACA+AGG | + | chr8.1:44244968-44244987 | MS.gene062546:CDS | 45.0% | |
| ACAACGTCGACAACTATGAG+AGG | - | chr8.1:44246081-44246100 | None:intergenic | 45.0% | |
| ACCTAAAGCTAGACGGAATG+AGG | + | chr8.1:44246046-44246065 | MS.gene062546:intron | 45.0% | |
| AGAATGGATCTCGCATCAGA+AGG | - | chr8.1:44244130-44244149 | None:intergenic | 45.0% | |
| AGAGCTTCTGGTGAAGAAGA+TGG | - | chr8.1:44244172-44244191 | None:intergenic | 45.0% | |
| ATAACTAAACGGTTGAGGGC+AGG | - | chr8.1:44245976-44245995 | None:intergenic | 45.0% | |
| ATCCCTGTATGATACCCTTC+TGG | + | chr8.1:44245031-44245050 | MS.gene062546:CDS | 45.0% | |
| ATCTGTAGATCAGATGTCCC+TGG | - | chr8.1:44244364-44244383 | None:intergenic | 45.0% | |
| ATTTCCCTGCAGGACATTGA+TGG | - | chr8.1:44246979-44246998 | None:intergenic | 45.0% | |
| CAACGTCGACAACTATGAGA+GGG | - | chr8.1:44246080-44246099 | None:intergenic | 45.0% | |
| CAATGCTCTTGAAGACCCTA+AGG | + | chr8.1:44244776-44244795 | MS.gene062546:CDS | 45.0% | |
| CACCACTCATAGCATTGCTT+AGG | - | chr8.1:44247103-44247122 | None:intergenic | 45.0% | |
| CAGGGAAATAGTGCCTCATA+CGG | + | chr8.1:44246990-44247009 | MS.gene062546:CDS | 45.0% | |
| CCTAAAGCTAGACGGAATGA+GGG | + | chr8.1:44246047-44246066 | MS.gene062546:intron | 45.0% | |
| CGACTCAATAACACCCGAAA+AGG | - | chr8.1:44245425-44245444 | None:intergenic | 45.0% | |
| CTAAATGGTCCAACCCATCA+CGG | - | chr8.1:44245934-44245953 | None:intergenic | 45.0% | |
| CTGAGCAATTGAATCCGTTG+TGG | - | chr8.1:44244089-44244108 | None:intergenic | 45.0% | |
| GAATGGATCTCGCATCAGAA+GGG | - | chr8.1:44244129-44244148 | None:intergenic | 45.0% | |
| GAGTGGAATACTTCATGCTG+AGG | + | chr8.1:44244701-44244720 | MS.gene062546:intron | 45.0% | |
| GGATTCAATTGCTCAGGCAT+TGG | + | chr8.1:44244093-44244112 | MS.gene062546:CDS | 45.0% | |
| GGTGAAGTTAGCTGAGGATA+TGG | + | chr8.1:44246830-44246849 | MS.gene062546:intron | 45.0% | |
| GGTGGAGAAAACAAGCACAT+TGG | + | chr8.1:44246354-44246373 | MS.gene062546:CDS | 45.0% | |
| GGTTGAGATGCGAGGATAAA+AGG | + | chr8.1:44245520-44245539 | MS.gene062546:intron | 45.0% | |
| GTCAACCACTTTCCCAACAT+TGG | - | chr8.1:44245276-44245295 | None:intergenic | 45.0% | |
| GTCCTAAGCAATGCTATGAG+TGG | + | chr8.1:44247098-44247117 | MS.gene062546:CDS | 45.0% | |
| TAACTAAACGGTTGAGGGCA+GGG | - | chr8.1:44245975-44245994 | None:intergenic | 45.0% | |
| TCATCCAAGTGGGAGATTGT+TGG | + | chr8.1:44245768-44245787 | MS.gene062546:intron | 45.0% | |
| TCTTGCTGGGTTTGGAAACT+TGG | + | chr8.1:44247043-44247062 | MS.gene062546:CDS | 45.0% | |
| TCTTTCATACGCAGAGCTTC+TGG | - | chr8.1:44244184-44244203 | None:intergenic | 45.0% | |
| TGCGCAATTCGAATCTTGCT+GGG | + | chr8.1:44247030-44247049 | MS.gene062546:CDS | 45.0% | |
| TGTTAGGTCTGCCAAGATCA+TGG | + | chr8.1:44245304-44245323 | MS.gene062546:intron | 45.0% | |
| TTCCGCTCAACGTGATCAAT+TGG | - | chr8.1:44245131-44245150 | None:intergenic | 45.0% | |
| TTGGTCTGAACTTGAGTCTC+AGG | + | chr8.1:44246373-44246392 | MS.gene062546:CDS | 45.0% | |
| TTTGCTGGGACATTGGATCA+AGG | + | chr8.1:44245179-44245198 | MS.gene062546:CDS | 45.0% | |
| ! | AATCAAGCTGATGATGTGGG+TGG | + | chr8.1:44244843-44244862 | MS.gene062546:CDS | 45.0% |
| ! | CACAACGGATTCAATTGCTC+AGG | + | chr8.1:44244087-44244106 | MS.gene062546:CDS | 45.0% |
| ! | CTGGTAGTCATGTTGAGTTG+TGG | - | chr8.1:44246927-44246946 | None:intergenic | 45.0% |
| ! | GGTGAATCAAGCTGATGATG+TGG | + | chr8.1:44244839-44244858 | MS.gene062546:CDS | 45.0% |
| ! | GGTGTTATGAAGAACCAGGA+AGG | + | chr8.1:44245466-44245485 | MS.gene062546:intron | 45.0% |
| ! | TTGATGGTTGGCGAAACATG+TGG | - | chr8.1:44246963-44246982 | None:intergenic | 45.0% |
| ! | TTTTCTCCACCTTGACCTCT+TGG | - | chr8.1:44246345-44246364 | None:intergenic | 45.0% |
| !! | AACCCTTCTGAAACCATGTC+AGG | - | chr8.1:44246306-44246325 | None:intergenic | 45.0% |
| !! | ATGCGGTGTTATGAAGAACC+AGG | + | chr8.1:44245462-44245481 | MS.gene062546:intron | 45.0% |
| !! | CAAGAAGTTTGCTGGGACAT+TGG | + | chr8.1:44245172-44245191 | MS.gene062546:CDS | 45.0% |
| !! | CTCCAGAAGGGTATCATACA+GGG | - | chr8.1:44245036-44245055 | None:intergenic | 45.0% |
| !! | TCTTTCTGGGTTGGTCAAAG+AGG | + | chr8.1:44244510-44244529 | MS.gene062546:CDS | 45.0% |
| !! | TTCAATTGCTCAGGCATTGG+AGG | + | chr8.1:44244096-44244115 | MS.gene062546:CDS | 45.0% |
| !! | ATTATTTAATTAATCAATTA+TGG | + | chr8.1:44245795-44245814 | MS.gene062546:intron | 5.0% |
| ACCTTCTCAGGCAAGAGAAC+AGG | + | chr8.1:44244227-44244246 | MS.gene062546:CDS | 50.0% | |
| AGATGCGAGGATAAAAGGGG+AGG | + | chr8.1:44245525-44245544 | MS.gene062546:intron | 50.0% | |
| AGCTCTGCGTATGAAAGAGC+AGG | + | chr8.1:44244186-44244205 | MS.gene062546:CDS | 50.0% | |
| AGGACTACAAGGCACAGTTG+GGG | + | chr8.1:44244979-44244998 | MS.gene062546:CDS | 50.0% | |
| AGGGCCTCAATGAAGTGAGA+AGG | - | chr8.1:44244270-44244289 | None:intergenic | 50.0% | |
| ATGTGCCTCCTGCTCAACAA+GGG | + | chr8.1:44244664-44244683 | MS.gene062546:intron | 50.0% | |
| CAGGACTACAAGGCACAGTT+GGG | + | chr8.1:44244978-44244997 | MS.gene062546:CDS | 50.0% | |
| CCAACCATCAATGTCCTGCA+GGG | + | chr8.1:44246972-44246991 | MS.gene062546:CDS | 50.0% | |
| CCTTCTCAGGCAAGAGAACA+GGG | + | chr8.1:44244228-44244247 | MS.gene062546:CDS | 50.0% | |
| CTAATTGCGAGTCAGCCAAG+AGG | + | chr8.1:44246327-44246346 | MS.gene062546:CDS | 50.0% | |
| CTTCTCAGGCAAGAGAACAG+GGG | + | chr8.1:44244229-44244248 | MS.gene062546:CDS | 50.0% | |
| GAGAGCTCATGCCATGATCT+TGG | - | chr8.1:44245318-44245337 | None:intergenic | 50.0% | |
| GATGCGAGGATAAAAGGGGA+GGG | + | chr8.1:44245526-44245545 | MS.gene062546:intron | 50.0% | |
| GCAATATGTTGGGCCTGACT+TGG | + | chr8.1:44244890-44244909 | MS.gene062546:CDS | 50.0% | |
| GCAATTGAATCCGTTGTGGC+AGG | - | chr8.1:44244085-44244104 | None:intergenic | 50.0% | |
| GCAGCCTTCTCACTTCATTG+AGG | + | chr8.1:44244263-44244282 | MS.gene062546:CDS | 50.0% | |
| GCTTTCATCGCATCCAAGTC+AGG | - | chr8.1:44244906-44244925 | None:intergenic | 50.0% | |
| GGAAATAGTGCCTCATACGG+TGG | + | chr8.1:44246993-44247012 | MS.gene062546:CDS | 50.0% | |
| GTGCGCAATTCGAATCTTGC+TGG | + | chr8.1:44247029-44247048 | MS.gene062546:CDS | 50.0% | |
| TATGTGCCTCCTGCTCAACA+AGG | + | chr8.1:44244663-44244682 | MS.gene062546:intron | 50.0% | |
| TTGGCGAAACATGTGGCATG+CGG | - | chr8.1:44246956-44246975 | None:intergenic | 50.0% | |
| ! | ATGAGGCACTATTTCCCTGC+AGG | - | chr8.1:44246989-44247008 | None:intergenic | 50.0% |
| ! | CTTTGGTTGGTTGAGATGCG+AGG | + | chr8.1:44245512-44245531 | MS.gene062546:intron | 50.0% |
| ! | GGGAAGCTTTTGCCTTTGGA+AGG | - | chr8.1:44244609-44244628 | None:intergenic | 50.0% |
| ! | GTGAGGGAAGCTTTTGCCTT+TGG | - | chr8.1:44244613-44244632 | None:intergenic | 50.0% |
| !! | CCCTCATTCCGTCTAGCTTT+AGG | - | chr8.1:44246050-44246069 | None:intergenic | 50.0% |
| !! | CTAAATGGACCGTGATGGGT+TGG | + | chr8.1:44245922-44245941 | MS.gene062546:intron | 50.0% |
| !! | CTGGGTTGGTCAAAGAGGTT+AGG | + | chr8.1:44244515-44244534 | MS.gene062546:CDS | 50.0% |
| !! | GCTCCAGAAGGGTATCATAC+AGG | - | chr8.1:44245037-44245056 | None:intergenic | 50.0% |
| AACCGCAACACCACCGTATG+AGG | - | chr8.1:44247006-44247025 | None:intergenic | 55.0% | |
| AGCTGTTCTAGCAGCCGTGA+GGG | - | chr8.1:44244629-44244648 | None:intergenic | 55.0% | |
| AGTCAGCCAAGAGGTCAAGG+TGG | + | chr8.1:44246336-44246355 | MS.gene062546:CDS | 55.0% | |
| ATGTGGCATGCGGCGAATAC+TGG | - | chr8.1:44246946-44246965 | None:intergenic | 55.0% | |
| CCCTGTTCTCTTGCCTGAGA+AGG | - | chr8.1:44244231-44244250 | None:intergenic | 55.0% | |
| CGAGGATAAAAGGGGAGGGA+GGG | + | chr8.1:44245530-44245549 | MS.gene062546:intron | 55.0% | |
| GAGGATAAAAGGGGAGGGAG+GGG | + | chr8.1:44245531-44245550 | MS.gene062546:intron | 55.0% | |
| GCAGGACTACAAGGCACAGT+TGG | + | chr8.1:44244977-44244996 | MS.gene062546:CDS | 55.0% | |
| GCCAACCATCAATGTCCTGC+AGG | + | chr8.1:44246971-44246990 | MS.gene062546:CDS | 55.0% | |
| GGACTACAAGGCACAGTTGG+GGG | + | chr8.1:44244980-44244999 | MS.gene062546:CDS | 55.0% | |
| GGGACATTGGATCAAGGTGC+CGG | + | chr8.1:44245185-44245204 | MS.gene062546:CDS | 55.0% | |
| GGGGCCATAGATCTTCAGAG+TGG | + | chr8.1:44244684-44244703 | MS.gene062546:intron | 55.0% | |
| TCTATGGCCCCTTGTTGAGC+AGG | - | chr8.1:44244675-44244694 | None:intergenic | 55.0% | |
| TGTGCCTCCTGCTCAACAAG+GGG | + | chr8.1:44244665-44244684 | MS.gene062546:intron | 55.0% | |
| ! | CCCTGCAGGACATTGATGGT+TGG | - | chr8.1:44246975-44246994 | None:intergenic | 55.0% |
| ! | TGCCTCATACGGTGGTGTTG+CGG | + | chr8.1:44247001-44247020 | MS.gene062546:CDS | 55.0% |
| !! | TCATACGGTGGTGTTGCGGT+TGG | + | chr8.1:44247005-44247024 | MS.gene062546:CDS | 55.0% |
| ATGGCCCCTTGTTGAGCAGG+AGG | - | chr8.1:44244672-44244691 | None:intergenic | 60.0% | |
| CAGCTGTTCTAGCAGCCGTG+AGG | - | chr8.1:44244630-44244649 | None:intergenic | 60.0% | |
| CAGGCAAGAGAACAGGGGAG+AGG | + | chr8.1:44244234-44244253 | MS.gene062546:CDS | 60.0% | |
| GCGAGGATAAAAGGGGAGGG+AGG | + | chr8.1:44245529-44245548 | MS.gene062546:intron | 60.0% | |
| GCGAGTCAGCCAAGAGGTCA+AGG | + | chr8.1:44246333-44246352 | MS.gene062546:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 44244064 | 44247139 | 44244064 | ID=MS.gene062546 |
| chr8.1 | mRNA | 44244064 | 44247139 | 44244064 | ID=MS.gene062546.t1;Parent=MS.gene062546 |
| chr8.1 | exon | 44244064 | 44244665 | 44244064 | ID=MS.gene062546.t1.exon1;Parent=MS.gene062546.t1 |
| chr8.1 | CDS | 44244064 | 44244665 | 44244064 | ID=cds.MS.gene062546.t1;Parent=MS.gene062546.t1 |
| chr8.1 | exon | 44244749 | 44245309 | 44244749 | ID=MS.gene062546.t1.exon2;Parent=MS.gene062546.t1 |
| chr8.1 | CDS | 44244749 | 44245309 | 44244749 | ID=cds.MS.gene062546.t1;Parent=MS.gene062546.t1 |
| chr8.1 | exon | 44246319 | 44246394 | 44246319 | ID=MS.gene062546.t1.exon3;Parent=MS.gene062546.t1 |
| chr8.1 | CDS | 44246319 | 44246394 | 44246319 | ID=cds.MS.gene062546.t1;Parent=MS.gene062546.t1 |
| chr8.1 | exon | 44246618 | 44246743 | 44246618 | ID=MS.gene062546.t1.exon4;Parent=MS.gene062546.t1 |
| chr8.1 | CDS | 44246618 | 44246743 | 44246618 | ID=cds.MS.gene062546.t1;Parent=MS.gene062546.t1 |
| chr8.1 | exon | 44246831 | 44247139 | 44246831 | ID=MS.gene062546.t1.exon5;Parent=MS.gene062546.t1 |
| chr8.1 | CDS | 44246831 | 44247139 | 44246831 | ID=cds.MS.gene062546.t1;Parent=MS.gene062546.t1 |
| Gene Sequence |
| Protein sequence |
