Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063492.t1 | XP_013457987.1 | 93.7 | 605 | 34 | 3 | 1 | 601 | 1 | 605 | 4.40E-228 | 800.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063492.t1 | Q9C911 | 70.0 | 320 | 83 | 4 | 1 | 307 | 1 | 320 | 1.3e-98 | 362.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063492.t1 | A0A072USH1 | 93.7 | 605 | 34 | 3 | 1 | 601 | 1 | 605 | 3.2e-228 | 800.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene063492.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene063492 | 0.802693 | 4.97E-49 | -1.69E-46 |
| MS.gene049159 | MS.gene063492 | 0.800642 | 1.31E-48 | -1.69E-46 |
| MS.gene049411 | MS.gene063492 | 0.820472 | 6.74E-53 | -1.69E-46 |
| MS.gene049499 | MS.gene063492 | 0.803658 | 3.14E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene063492 | 0.808215 | 3.45E-50 | -1.69E-46 |
| MS.gene050085 | MS.gene063492 | 0.812437 | 4.24E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene063492 | 0.82854 | 8.49E-55 | -1.69E-46 |
| MS.gene050654 | MS.gene063492 | 0.831312 | 1.79E-55 | -1.69E-46 |
| MS.gene050689 | MS.gene063492 | 0.83923 | 1.79E-57 | -1.69E-46 |
| MS.gene050752 | MS.gene063492 | 0.803832 | 2.89E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene063492 | 0.82415 | 9.44E-54 | -1.69E-46 |
| MS.gene050941 | MS.gene063492 | 0.82203 | 2.95E-53 | -1.69E-46 |
| MS.gene051003 | MS.gene063492 | 0.852667 | 3.97E-61 | -1.69E-46 |
| MS.gene051234 | MS.gene063492 | 0.81966 | 1.03E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene063492 | 0.811505 | 6.77E-51 | -1.69E-46 |
| MS.gene051365 | MS.gene063492 | 0.80206 | 6.71E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene063492 | 0.810781 | 9.72E-51 | -1.69E-46 |
| MS.gene051902 | MS.gene063492 | 0.824787 | 6.68E-54 | -1.69E-46 |
| MS.gene052072 | MS.gene063492 | 0.832035 | 1.19E-55 | -1.69E-46 |
| MS.gene052307 | MS.gene063492 | 0.814913 | 1.21E-51 | -1.69E-46 |
| MS.gene052335 | MS.gene063492 | 0.817308 | 3.53E-52 | -1.69E-46 |
| MS.gene052342 | MS.gene063492 | 0.840056 | 1.09E-57 | -1.69E-46 |
| MS.gene052479 | MS.gene063492 | 0.810954 | 8.91E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene063492 | 0.80295 | 4.40E-49 | -1.69E-46 |
| MS.gene052518 | MS.gene063492 | 0.812011 | 5.25E-51 | -1.69E-46 |
| MS.gene053058 | MS.gene063492 | 0.803835 | 2.88E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene063492 | 0.810255 | 1.26E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene063492 | 0.8236 | 1.27E-53 | -1.69E-46 |
| MS.gene054004 | MS.gene063492 | 0.835336 | 1.78E-56 | -1.69E-46 |
| MS.gene054403 | MS.gene063492 | 0.804233 | 2.38E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene063492 | 0.804296 | 2.31E-49 | -1.69E-46 |
| MS.gene054709 | MS.gene063492 | 0.809241 | 2.09E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene063492 | 0.809914 | 1.50E-50 | -1.69E-46 |
| MS.gene055841 | MS.gene063492 | 0.805139 | 1.54E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene063492 | 0.801949 | 7.07E-49 | -1.69E-46 |
| MS.gene056578 | MS.gene063492 | 0.81933 | 1.23E-52 | -1.69E-46 |
| MS.gene056787 | MS.gene063492 | 0.806332 | 8.66E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene063492 | 0.831128 | 1.99E-55 | -1.69E-46 |
| MS.gene057208 | MS.gene063492 | 0.810657 | 1.03E-50 | -1.69E-46 |
| MS.gene057694 | MS.gene063492 | 0.82697 | 2.02E-54 | -1.69E-46 |
| MS.gene057705 | MS.gene063492 | 0.804243 | 2.37E-49 | -1.69E-46 |
| MS.gene05781 | MS.gene063492 | 0.830137 | 3.48E-55 | -1.69E-46 |
| MS.gene057890 | MS.gene063492 | -0.804923 | 1.71E-49 | -1.69E-46 |
| MS.gene058008 | MS.gene063492 | 0.831328 | 1.78E-55 | -1.69E-46 |
| MS.gene058009 | MS.gene063492 | 0.824352 | 8.45E-54 | -1.69E-46 |
| MS.gene058054 | MS.gene063492 | 0.809399 | 1.93E-50 | -1.69E-46 |
| MS.gene058646 | MS.gene063492 | 0.805918 | 1.06E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene063492 | 0.835875 | 1.30E-56 | -1.69E-46 |
| MS.gene058783 | MS.gene063492 | 0.848792 | 4.89E-60 | -1.69E-46 |
| MS.gene059146 | MS.gene063492 | 0.81475 | 1.31E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene063492 | 0.812457 | 4.20E-51 | -1.69E-46 |
| MS.gene060085 | MS.gene063492 | 0.8045 | 2.10E-49 | -1.69E-46 |
| MS.gene060296 | MS.gene063492 | 0.80042 | 1.45E-48 | -1.69E-46 |
| MS.gene060763 | MS.gene063492 | 0.815782 | 7.75E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene063492 | 0.806026 | 1.00E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene063492 | 0.832686 | 8.20E-56 | -1.69E-46 |
| MS.gene060937 | MS.gene063492 | 0.834679 | 2.61E-56 | -1.69E-46 |
| MS.gene061100 | MS.gene063492 | 0.861424 | 1.04E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063492 | MS.gene73119 | PPI |
| MS.gene063492 | MS.gene35110 | PPI |
| MS.gene063492 | MS.gene35108 | PPI |
| MS.gene063492 | MS.gene028350 | PPI |
| MS.gene063492 | MS.gene28721 | PPI |
| MS.gene063492 | MS.gene064542 | PPI |
| MS.gene063492 | MS.gene36441 | PPI |
| MS.gene035805 | MS.gene063492 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063492.t1 | MTR_4g109510 | 97.025 | 605 | 14 | 3 | 1 | 601 | 1 | 605 | 0.0 | 1175 |
| MS.gene063492.t1 | MTR_3g070480 | 80.682 | 88 | 15 | 2 | 480 | 565 | 6 | 93 | 3.34e-26 | 104 |
| MS.gene063492.t1 | MTR_7g109430 | 30.380 | 237 | 113 | 9 | 9 | 230 | 97 | 296 | 1.38e-16 | 84.0 |
| MS.gene063492.t1 | MTR_3g113680 | 29.958 | 237 | 114 | 9 | 9 | 230 | 97 | 296 | 1.24e-15 | 80.9 |
| MS.gene063492.t1 | MTR_7g112360 | 45.588 | 68 | 37 | 0 | 8 | 75 | 16 | 83 | 1.86e-15 | 73.2 |
| MS.gene063492.t1 | MTR_7g112360 | 45.588 | 68 | 37 | 0 | 8 | 75 | 16 | 83 | 2.17e-15 | 74.7 |
| MS.gene063492.t1 | MTR_8g022310 | 53.731 | 67 | 29 | 1 | 10 | 74 | 12 | 78 | 1.93e-14 | 72.8 |
| MS.gene063492.t1 | MTR_8g022310 | 53.731 | 67 | 29 | 1 | 10 | 74 | 12 | 78 | 2.16e-14 | 72.8 |
| MS.gene063492.t1 | MTR_8g022310 | 52.941 | 68 | 30 | 1 | 9 | 74 | 11 | 78 | 2.69e-14 | 72.8 |
| MS.gene063492.t1 | MTR_8g022310 | 53.731 | 67 | 29 | 1 | 10 | 74 | 12 | 78 | 3.35e-14 | 72.8 |
| MS.gene063492.t1 | MTR_4g085070 | 50.000 | 62 | 31 | 0 | 14 | 75 | 18 | 79 | 6.20e-13 | 67.4 |
| MS.gene063492.t1 | MTR_1g110310 | 34.899 | 149 | 79 | 5 | 2 | 149 | 10 | 141 | 5.94e-12 | 68.6 |
| MS.gene063492.t1 | MTR_6g026940 | 50.000 | 64 | 31 | 1 | 9 | 71 | 3 | 66 | 7.27e-11 | 62.0 |
| MS.gene063492.t1 | MTR_2g104030 | 38.462 | 104 | 56 | 2 | 9 | 109 | 71 | 169 | 7.96e-11 | 65.1 |
| MS.gene063492.t1 | MTR_6g027110 | 46.269 | 67 | 35 | 1 | 9 | 74 | 3 | 69 | 8.39e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063492.t1 | AT1G74250 | 52.174 | 575 | 202 | 11 | 1 | 523 | 1 | 554 | 1.44e-163 | 482 |
| MS.gene063492.t1 | AT3G11450 | 28.099 | 242 | 126 | 7 | 2 | 230 | 93 | 299 | 5.27e-15 | 79.0 |
| MS.gene063492.t1 | AT3G14200 | 53.846 | 65 | 29 | 1 | 10 | 74 | 14 | 77 | 3.82e-13 | 69.7 |
| MS.gene063492.t1 | AT1G56300 | 38.356 | 73 | 45 | 0 | 2 | 74 | 7 | 79 | 1.05e-12 | 65.5 |
| MS.gene063492.t1 | AT1G56300 | 38.356 | 73 | 45 | 0 | 2 | 74 | 7 | 79 | 1.46e-12 | 66.2 |
| MS.gene063492.t1 | AT1G71000 | 41.892 | 74 | 43 | 0 | 1 | 74 | 1 | 74 | 6.21e-12 | 64.7 |
| MS.gene063492.t1 | AT1G71000 | 41.892 | 74 | 43 | 0 | 1 | 74 | 1 | 74 | 7.12e-12 | 64.7 |
| MS.gene063492.t1 | AT5G25530 | 35.345 | 116 | 59 | 5 | 9 | 112 | 5 | 116 | 1.20e-11 | 67.0 |
| MS.gene063492.t1 | AT5G06110 | 27.799 | 259 | 121 | 10 | 9 | 251 | 101 | 309 | 3.34e-11 | 66.6 |
| MS.gene063492.t1 | AT5G06110 | 27.799 | 259 | 121 | 10 | 9 | 251 | 101 | 309 | 3.34e-11 | 66.6 |
| MS.gene063492.t1 | AT1G59980 | 33.333 | 168 | 87 | 8 | 6 | 168 | 21 | 168 | 9.84e-11 | 64.7 |
Find 151 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTCCTCTTATGGGGAATT+TGG | 0.141158 | 8.4:+18079539 | MS.gene063492:CDS |
| ACGGAATTAGACTTTGAATT+TGG | 0.172659 | 8.4:-18079354 | None:intergenic |
| CGAAGCCACCGCTCAGTTTC+AGG | 0.199966 | 8.4:+18079245 | MS.gene063492:CDS |
| TATGAAGGTGAAGAAGAATT+TGG | 0.247762 | 8.4:+18079794 | MS.gene063492:CDS |
| TTGCTAAGAAATTAGGTTTA+GGG | 0.251194 | 8.4:+18079499 | MS.gene063492:CDS |
| TGTTAGACAGGCTCCTCTTA+TGG | 0.265835 | 8.4:+18079530 | MS.gene063492:CDS |
| GGCGTTGGAGAGCGAGTTTC+CGG | 0.265860 | 8.4:-18079185 | None:intergenic |
| TTTGCTAAGAAATTAGGTTT+AGG | 0.269838 | 8.4:+18079498 | MS.gene063492:CDS |
| TGGCGTTGGGGTTGATGATT+TGG | 0.280098 | 8.4:+18080178 | MS.gene063492:CDS |
| TGATGTGTTTGATAAAATTC+AGG | 0.297358 | 8.4:+18079461 | MS.gene063492:CDS |
| GAGAAGAATGTAATCAATAT+TGG | 0.312751 | 8.4:+18080692 | MS.gene063492:CDS |
| GTTCTTGAAACAATGGTATC+TGG | 0.319682 | 8.4:+18080371 | MS.gene063492:CDS |
| TTCCGGTAAGGGTTTCTATA+AGG | 0.322734 | 8.4:+18079431 | MS.gene063492:CDS |
| GATGTTGATGATGATGAAAT+TGG | 0.336996 | 8.4:+18080440 | MS.gene063492:CDS |
| CCTGATTTGACGAGCTTGTC+AGG | 0.337742 | 8.4:-18079210 | None:intergenic |
| GTTAGACAGGCTCCTCTTAT+GGG | 0.353059 | 8.4:+18079531 | MS.gene063492:CDS |
| AACCTCCGCGACTTCCTATT+CGG | 0.359713 | 8.4:-18079663 | None:intergenic |
| AAGAACTCCGATCAGCTTAC+CGG | 0.367180 | 8.4:+18079166 | MS.gene063492:CDS |
| GGGCTTGTGTGTTGAAGCAC+TGG | 0.368221 | 8.4:-18080504 | None:intergenic |
| GATGGAGGAAGAGAATAATA+AGG | 0.374112 | 8.4:+18079686 | MS.gene063492:CDS |
| TAGGAAGTCGCGGAGGTTGA+TGG | 0.374440 | 8.4:+18079668 | MS.gene063492:CDS |
| ATGTTGATGATGATGAAATT+GGG | 0.378497 | 8.4:+18080441 | MS.gene063492:CDS |
| CCTGACAAGCTCGTCAAATC+AGG | 0.380161 | 8.4:+18079210 | MS.gene063492:CDS |
| TAAGCTGATCGGAGTTCTTC+CGG | 0.384438 | 8.4:-18079162 | None:intergenic |
| TCATCAACCTTAGCCCAATC+AGG | 0.385687 | 8.4:-18079903 | None:intergenic |
| CTGAAACTGAGCGGTGGCTT+CGG | 0.388334 | 8.4:-18079244 | None:intergenic |
| GAAGGAGAGGAAGAGGAAGT+TGG | 0.396116 | 8.4:+18079842 | MS.gene063492:CDS |
| AGGAGGAGAAGGAGAGGAAG+AGG | 0.399336 | 8.4:+18079835 | MS.gene063492:CDS |
| TCGTACCAAGCTCGTTCCTT+TGG | 0.399711 | 8.4:-18079300 | None:intergenic |
| GAAGAAGATTTCAAATCAAC+CGG | 0.408421 | 8.4:+18080811 | MS.gene063492:CDS |
| TGGCTTATGAGGAGCCTGAT+TGG | 0.409460 | 8.4:+18079889 | MS.gene063492:CDS |
| GAAACTAATGTGCCTACTAA+TGG | 0.414627 | 8.4:+18080662 | MS.gene063492:CDS |
| AAAGTGAGGAGGATGGCGTT+GGG | 0.416761 | 8.4:+18080165 | MS.gene063492:CDS |
| GGTGAGGAGGAAGGCGAAGA+GGG | 0.422169 | 8.4:+18079707 | MS.gene063492:CDS |
| TAAGAGAGTGATTGATATGA+AGG | 0.428180 | 8.4:+18079779 | MS.gene063492:CDS |
| TTCTCACTCTCAATTTGAGT+TGG | 0.428513 | 8.4:-18080542 | None:intergenic |
| GGAGAAAGTTGCTGAGTTCA+AGG | 0.429185 | 8.4:+18080061 | MS.gene063492:CDS |
| ATCCGAAAACCCCGAAAATA+CGG | 0.430044 | 8.4:-18079409 | None:intergenic |
| TAGTCCTTATGCGCAGGTTA+CGG | 0.433863 | 8.4:+18079563 | MS.gene063492:CDS |
| AGGGATTGATTCTGTTAGAC+AGG | 0.434136 | 8.4:+18079518 | MS.gene063492:CDS |
| GAAGTTGGAGATGGAGAGGA+AGG | 0.434700 | 8.4:+18079857 | MS.gene063492:CDS |
| TTCGAGGAAAATGAGGATAA+TGG | 0.435391 | 8.4:+18080755 | MS.gene063492:CDS |
| GCAGAAGACGAGAGTGCAAA+TGG | 0.435707 | 8.4:+18080230 | MS.gene063492:CDS |
| GGAGAGGGCTATGGCTTATG+AGG | 0.439385 | 8.4:+18079878 | MS.gene063492:CDS |
| AAAGCCGTAACCTGCGCATA+AGG | 0.439715 | 8.4:-18079567 | None:intergenic |
| AGAAGTTGAGGATTTGTATG+AGG | 0.441764 | 8.4:+18079929 | MS.gene063492:CDS |
| AACCTTATAGAAACCCTTAC+CGG | 0.442360 | 8.4:-18079433 | None:intergenic |
| ATGCGATGGCAGGTCCGAAT+AGG | 0.442745 | 8.4:+18079649 | MS.gene063492:CDS |
| CGATGCCACTACGAAGTTCT+CGG | 0.443193 | 8.4:+18079120 | MS.gene063492:CDS |
| GGCTTATGAGGAGCCTGATT+GGG | 0.449241 | 8.4:+18079890 | MS.gene063492:CDS |
| GAAGAAGAAAGAGGAGGAGA+AGG | 0.462080 | 8.4:+18079824 | MS.gene063492:CDS |
| TTCTCATATTTGCCATTAGT+AGG | 0.462771 | 8.4:-18080674 | None:intergenic |
| TGGTATCTGGGCACAAGGGC+CGG | 0.463969 | 8.4:+18080384 | MS.gene063492:CDS |
| CGAGCTTGTCAGGGTGGCGT+TGG | 0.466381 | 8.4:-18079200 | None:intergenic |
| AGTTTAAGAGTGAGAAGCAA+TGG | 0.469035 | 8.4:+18080009 | MS.gene063492:CDS |
| TGAAAGTGAAGGGGTTGGAG+AGG | 0.470038 | 8.4:+18080133 | MS.gene063492:CDS |
| GAAGGTGAAAGTGAAGGGGT+TGG | 0.476024 | 8.4:+18080128 | MS.gene063492:CDS |
| CTATCCAAATTCCCCATAAG+AGG | 0.477965 | 8.4:-18079543 | None:intergenic |
| GAATGATGGGGTTGGTGCTA+TGG | 0.478029 | 8.4:+18080568 | MS.gene063492:CDS |
| GTCTAGTTCCCAATATTTCG+AGG | 0.480169 | 8.4:+18080739 | MS.gene063492:CDS |
| CCAATATTTCGAGGAAAATG+AGG | 0.482316 | 8.4:+18080748 | MS.gene063492:CDS |
| GTTCTTGAAGCAATGCTGGC+TGG | 0.482368 | 8.4:+18080464 | MS.gene063492:CDS |
| TGGGGTTCTTGAAGCAATGC+TGG | 0.483544 | 8.4:+18080460 | MS.gene063492:CDS |
| GAGGAAGAGGAAGTTGGAGA+TGG | 0.484765 | 8.4:+18079848 | MS.gene063492:CDS |
| GAAAGTGAGGAGGATGGCGT+TGG | 0.484850 | 8.4:+18080164 | MS.gene063492:CDS |
| CAGTAGTCATGGCACAATAC+AGG | 0.489724 | 8.4:-18080939 | None:intergenic |
| GAATAATAAGGTGAGGAGGA+AGG | 0.491971 | 8.4:+18079698 | MS.gene063492:CDS |
| AGTTGGAGTTTCAGAAGCCT+CGG | 0.497718 | 8.4:-18080525 | None:intergenic |
| TCATTGTCACCATCATCATT+CGG | 0.500186 | 8.4:-18080260 | None:intergenic |
| GGCTTGTGTGTTGAAGCACT+GGG | 0.501875 | 8.4:-18080503 | None:intergenic |
| CAGAAGACGAGAGTGCAAAT+GGG | 0.506677 | 8.4:+18080231 | MS.gene063492:CDS |
| AGAAAGAGGAGGAGAAGGAG+AGG | 0.506886 | 8.4:+18079829 | MS.gene063492:CDS |
| AGAGGAAGTTGGAGATGGAG+AGG | 0.510470 | 8.4:+18079853 | MS.gene063492:CDS |
| GCACAATACAGGAACAGAAC+AGG | 0.510659 | 8.4:-18080928 | None:intergenic |
| AGAGGAGAGATTAGAAAGTG+AGG | 0.511041 | 8.4:+18080151 | MS.gene063492:CDS |
| ACGAGGAAGGTGAAAGTGAA+GGG | 0.517150 | 8.4:+18080123 | MS.gene063492:CDS |
| GACGAGGAAGGTGAAAGTGA+AGG | 0.520922 | 8.4:+18080122 | MS.gene063492:CDS |
| GAGAGTGAGAATGAGAATGA+TGG | 0.521962 | 8.4:+18080554 | MS.gene063492:CDS |
| GTTTGAGAAGAAAGATGAGA+AGG | 0.522115 | 8.4:+18079959 | MS.gene063492:CDS |
| TGGATCGGAGAGTACCTCAT+AGG | 0.522444 | 8.4:-18079280 | None:intergenic |
| TGAGCAGAGTAAGAAGCATA+AGG | 0.522481 | 8.4:+18080040 | MS.gene063492:CDS |
| TGGAGATGGAGAGGAAGGAG+AGG | 0.522737 | 8.4:+18079862 | MS.gene063492:CDS |
| AGATTAGAAAGTGAGGAGGA+TGG | 0.523209 | 8.4:+18080158 | MS.gene063492:CDS |
| GGTTGATGAAGAAGAAGTTG+AGG | 0.524241 | 8.4:+18079917 | MS.gene063492:CDS |
| CGAAGCAACAATGGCATCGA+CGG | 0.524518 | 8.4:+18079092 | None:intergenic |
| CATTCTCATCAAAATCAAAC+CGG | 0.526287 | 8.4:-18080403 | None:intergenic |
| CGAGTTTCCGGTAAGCTGAT+CGG | 0.532549 | 8.4:-18079173 | None:intergenic |
| ATTAGACTTTGAATTTGGAT+CGG | 0.533157 | 8.4:-18079349 | None:intergenic |
| TGAGGAGCCTGATTGGGCTA+AGG | 0.533690 | 8.4:+18079896 | MS.gene063492:CDS |
| AGGTGAGGAGGAAGGCGAAG+AGG | 0.534213 | 8.4:+18079706 | MS.gene063492:CDS |
| TTCTTGAAACAATGGTATCT+GGG | 0.534518 | 8.4:+18080372 | MS.gene063492:CDS |
| GGTGAAGAAGAATTTGGAGA+TGG | 0.534575 | 8.4:+18079800 | MS.gene063492:CDS |
| AGAGTGAGAATGAGAATGAT+GGG | 0.534818 | 8.4:+18080555 | MS.gene063492:CDS |
| GGAGAGGAAGGAGAGGGCTA+TGG | 0.537823 | 8.4:+18079869 | MS.gene063492:CDS |
| AGAGGAGTTAGAAGCTGAAG+TGG | 0.540411 | 8.4:+18080100 | MS.gene063492:CDS |
| GGAGATGGAGAAGAAGAAAG+AGG | 0.547787 | 8.4:+18079815 | MS.gene063492:CDS |
| TTGAATTTGGATCGGAGAAG+AGG | 0.548637 | 8.4:-18079341 | None:intergenic |
| AATGTAATCAATATTGGAGA+TGG | 0.550622 | 8.4:+18080698 | MS.gene063492:CDS |
| GATGAGTATGATGCGATGGC+AGG | 0.551327 | 8.4:+18079639 | MS.gene063492:CDS |
| GGAGATGGAGAGGAAGGAGA+GGG | 0.552905 | 8.4:+18079863 | MS.gene063492:CDS |
| GAAGAGGATTTGAGAACGAT+GGG | 0.554440 | 8.4:-18079325 | None:intergenic |
| CCAAGCTCGTTCCTTTGGAT+CGG | 0.555573 | 8.4:-18079295 | None:intergenic |
| CGATGATGTTCTTGAAACAA+TGG | 0.555739 | 8.4:+18080364 | MS.gene063492:CDS |
| GTTGGAGTTTCAGAAGCCTC+GGG | 0.557564 | 8.4:-18080524 | None:intergenic |
| AGAAGAGGATTTGAGAACGA+TGG | 0.558151 | 8.4:-18079326 | None:intergenic |
| CCGATCCAAAGGAACGAGCT+TGG | 0.558363 | 8.4:+18079295 | MS.gene063492:CDS |
| GGAGAGATTAGAAAGTGAGG+AGG | 0.558505 | 8.4:+18080154 | MS.gene063492:CDS |
| GTTAGAAGCTGAAGTGGACG+AGG | 0.565424 | 8.4:+18080106 | MS.gene063492:CDS |
| CGAAAACAGGTCAGGGACAA+CGG | 0.566006 | 8.4:-18079373 | None:intergenic |
| TTTGGATAGTCCTTATGCGC+AGG | 0.567782 | 8.4:+18079557 | MS.gene063492:CDS |
| GAGCAAAGAAAGAGAAGGGT+GGG | 0.568242 | 8.4:+18080627 | MS.gene063492:CDS |
| AACAATGGTATCTGGGCACA+AGG | 0.568483 | 8.4:+18080379 | MS.gene063492:CDS |
| AAGAGAATAATAAGGTGAGG+AGG | 0.569009 | 8.4:+18079694 | MS.gene063492:CDS |
| TCTACCTCGCGAATGCTCAC+CGG | 0.571563 | 8.4:+18079143 | MS.gene063492:CDS |
| CTGATTTGACGAGCTTGTCA+GGG | 0.572375 | 8.4:-18079209 | None:intergenic |
| GGATTCACTTGATGATGAAG+AGG | 0.574101 | 8.4:+18080082 | MS.gene063492:CDS |
| GGAGCTACAACACGCCTATG+AGG | 0.575033 | 8.4:+18079266 | MS.gene063492:CDS |
| CGGTGGCTTCGGATTGAGAG+AGG | 0.580013 | 8.4:-18079233 | None:intergenic |
| ACGTAGAGCAAAGAAAGAGA+AGG | 0.595059 | 8.4:+18080622 | MS.gene063492:CDS |
| GGGGTTGAGCCGAATGATGA+TGG | 0.597019 | 8.4:+18080251 | MS.gene063492:CDS |
| TGAGGTACTCTCCGATCCAA+AGG | 0.600261 | 8.4:+18079284 | MS.gene063492:CDS |
| AGGAAGAGAATAATAAGGTG+AGG | 0.601773 | 8.4:+18079691 | MS.gene063492:CDS |
| AAGTGAGGAGGATGGCGTTG+GGG | 0.606066 | 8.4:+18080166 | MS.gene063492:CDS |
| CGGTAAAGAGAATGAGCAGG+TGG | 0.606870 | 8.4:+18080778 | MS.gene063492:CDS |
| GGCGGATGAGTATGATGCGA+TGG | 0.610486 | 8.4:+18079635 | MS.gene063492:CDS |
| CGAGGAAGGTGAAAGTGAAG+GGG | 0.611247 | 8.4:+18080124 | MS.gene063492:CDS |
| TTAGACAGGCTCCTCTTATG+GGG | 0.611836 | 8.4:+18079532 | MS.gene063492:CDS |
| TAATGATACTGTGAGAAAGT+TGG | 0.612128 | 8.4:+18079734 | MS.gene063492:CDS |
| TGGCGGTAAAGAGAATGAGC+AGG | 0.613961 | 8.4:+18080775 | MS.gene063492:CDS |
| GAAGCTGAAGTGGACGAGGA+AGG | 0.614178 | 8.4:+18080110 | MS.gene063492:CDS |
| CGTAGAGCAAAGAAAGAGAA+GGG | 0.619612 | 8.4:+18080623 | MS.gene063492:CDS |
| TGTTGATGATGATGAAATTG+GGG | 0.621284 | 8.4:+18080442 | MS.gene063492:CDS |
| GAGAATGAGAATGATGGGGT+TGG | 0.635119 | 8.4:+18080560 | MS.gene063492:CDS |
| ATTTGACGAGCTTGTCAGGG+TGG | 0.643119 | 8.4:-18079206 | None:intergenic |
| GATGGAGAAGAAGAAAGAGG+AGG | 0.648465 | 8.4:+18079818 | MS.gene063492:CDS |
| AGAAGACGAGAGTGCAAATG+GGG | 0.651811 | 8.4:+18080232 | MS.gene063492:CDS |
| TGCTGAGCATGCAGAAGATG+AGG | 0.654863 | 8.4:+18080295 | MS.gene063492:CDS |
| AGAGCAAAGAAAGAGAAGGG+TGG | 0.655964 | 8.4:+18080626 | MS.gene063492:CDS |
| TGCTTCAACACACAAGCCCG+AGG | 0.660773 | 8.4:+18080508 | MS.gene063492:CDS |
| TAGCTCCTGAAACTGAGCGG+TGG | 0.662261 | 8.4:-18079250 | None:intergenic |
| CAGGTCCGAATAGGAAGTCG+CGG | 0.662770 | 8.4:+18079658 | MS.gene063492:CDS |
| GAAGTCGCGGAGGTTGATGG+AGG | 0.669800 | 8.4:+18079671 | MS.gene063492:CDS |
| AGATCAAAACTTTCAACCAG+AGG | 0.672866 | 8.4:+18080869 | MS.gene063492:CDS |
| ACAATGGTATCTGGGCACAA+GGG | 0.680825 | 8.4:+18080380 | MS.gene063492:CDS |
| TCTTCCGGTGAGCATTCGCG+AGG | 0.687306 | 8.4:-18079147 | None:intergenic |
| GGTAAAGAGAATGAGCAGGT+GGG | 0.690040 | 8.4:+18080779 | MS.gene063492:CDS |
| GAGGAAAATGAGGATAATGG+CGG | 0.690575 | 8.4:+18080758 | MS.gene063492:CDS |
| GAGTGAGAATGAGAATGATG+GGG | 0.711594 | 8.4:+18080556 | MS.gene063492:CDS |
| GTCCGAATAGGAAGTCGCGG+AGG | 0.733839 | 8.4:+18079661 | MS.gene063492:CDS |
| GTAGACCGAGAACTTCGTAG+TGG | 0.735555 | 8.4:-18079125 | None:intergenic |
| TTGTAGCTCCTGAAACTGAG+CGG | 0.736164 | 8.4:-18079253 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTCATAAAAACATACATT+TGG | - | chr8.4:18080902-18080921 | None:intergenic | 15.0% |
| !!! | ATTAATTTTGCTAAGAAATT+AGG | + | chr8.4:18079492-18079511 | MS.gene063492:CDS | 15.0% |
| ! | AATGTAATCAATATTGGAGA+TGG | + | chr8.4:18080698-18080717 | MS.gene063492:CDS | 25.0% |
| ! | ATTAGACTTTGAATTTGGAT+CGG | - | chr8.4:18079352-18079371 | None:intergenic | 25.0% |
| ! | GAGAAGAATGTAATCAATAT+TGG | + | chr8.4:18080692-18080711 | MS.gene063492:CDS | 25.0% |
| ! | TGATGTGTTTGATAAAATTC+AGG | + | chr8.4:18079461-18079480 | MS.gene063492:CDS | 25.0% |
| ! | TTGCTAAGAAATTAGGTTTA+GGG | + | chr8.4:18079499-18079518 | MS.gene063492:CDS | 25.0% |
| ! | TTTGCTAAGAAATTAGGTTT+AGG | + | chr8.4:18079498-18079517 | MS.gene063492:CDS | 25.0% |
| !! | TTACGGCTTTTTATAGTTAT+TGG | + | chr8.4:18079580-18079599 | MS.gene063492:CDS | 25.0% |
| !!! | ATGTTGATGATGATGAAATT+GGG | + | chr8.4:18080441-18080460 | MS.gene063492:CDS | 25.0% |
| !!! | GCTTTTTATAGTTATTGGTT+GGG | + | chr8.4:18079585-18079604 | MS.gene063492:CDS | 25.0% |
| !!! | TTTGATTTTGATGAGAATGA+TGG | + | chr8.4:18080407-18080426 | MS.gene063492:CDS | 25.0% |
| ACGGAATTAGACTTTGAATT+TGG | - | chr8.4:18079357-18079376 | None:intergenic | 30.0% | |
| CATTCTCATCAAAATCAAAC+CGG | - | chr8.4:18080406-18080425 | None:intergenic | 30.0% | |
| GAAGAAGATTTCAAATCAAC+CGG | + | chr8.4:18080811-18080830 | MS.gene063492:CDS | 30.0% | |
| TAAGAGAGTGATTGATATGA+AGG | + | chr8.4:18079779-18079798 | MS.gene063492:CDS | 30.0% | |
| TAATGATACTGTGAGAAAGT+TGG | + | chr8.4:18079734-18079753 | MS.gene063492:CDS | 30.0% | |
| TATGAAGGTGAAGAAGAATT+TGG | + | chr8.4:18079794-18079813 | MS.gene063492:CDS | 30.0% | |
| TATTCGAGAAAAACGAAAAC+AGG | - | chr8.4:18079389-18079408 | None:intergenic | 30.0% | |
| TTCTCATATTTGCCATTAGT+AGG | - | chr8.4:18080677-18080696 | None:intergenic | 30.0% | |
| TTCTTGAAACAATGGTATCT+GGG | + | chr8.4:18080372-18080391 | MS.gene063492:CDS | 30.0% | |
| ! | CTCATTTTCCTCGAAATATT+GGG | - | chr8.4:18080750-18080769 | None:intergenic | 30.0% |
| ! | GACTGTTATGGATTTTTGTT+GGG | + | chr8.4:18079614-18079633 | MS.gene063492:CDS | 30.0% |
| ! | GGCTTTTTATAGTTATTGGT+TGG | + | chr8.4:18079584-18079603 | MS.gene063492:CDS | 30.0% |
| ! | TTTCTCGAATACCGTATTTT+CGG | + | chr8.4:18079398-18079417 | MS.gene063492:CDS | 30.0% |
| !! | AATCAACCGGTTGATAAAAA+AGG | + | chr8.4:18080824-18080843 | MS.gene063492:CDS | 30.0% |
| !! | GATGTTGATGATGATGAAAT+TGG | + | chr8.4:18080440-18080459 | MS.gene063492:CDS | 30.0% |
| !! | TGTTGATGATGATGAAATTG+GGG | + | chr8.4:18080442-18080461 | MS.gene063492:CDS | 30.0% |
| !!! | AGTTTTATTGTGTGTTGTGT+GGG | + | chr8.4:18079982-18080001 | MS.gene063492:CDS | 30.0% |
| !!! | GAAGTTCCTTTTTTATCAAC+CGG | - | chr8.4:18080833-18080852 | None:intergenic | 30.0% |
| !!! | GTTTCTTTTTTGCAGGTTTT+CGG | - | chr8.4:18080604-18080623 | None:intergenic | 30.0% |
| AACCTTATAGAAACCCTTAC+CGG | - | chr8.4:18079436-18079455 | None:intergenic | 35.0% | |
| AAGAGAATAATAAGGTGAGG+AGG | + | chr8.4:18079694-18079713 | MS.gene063492:CDS | 35.0% | |
| AGAAAAACGAAAACAGGTCA+GGG | - | chr8.4:18079383-18079402 | None:intergenic | 35.0% | |
| AGAAGTTGAGGATTTGTATG+AGG | + | chr8.4:18079929-18079948 | MS.gene063492:CDS | 35.0% | |
| AGAGTGAGAATGAGAATGAT+GGG | + | chr8.4:18080555-18080574 | MS.gene063492:CDS | 35.0% | |
| AGATCAAAACTTTCAACCAG+AGG | + | chr8.4:18080869-18080888 | MS.gene063492:CDS | 35.0% | |
| AGGAAGAGAATAATAAGGTG+AGG | + | chr8.4:18079691-18079710 | MS.gene063492:CDS | 35.0% | |
| AGTTTAAGAGTGAGAAGCAA+TGG | + | chr8.4:18080009-18080028 | MS.gene063492:CDS | 35.0% | |
| CCAATATTTCGAGGAAAATG+AGG | + | chr8.4:18080748-18080767 | MS.gene063492:CDS | 35.0% | |
| CGATGATGTTCTTGAAACAA+TGG | + | chr8.4:18080364-18080383 | MS.gene063492:CDS | 35.0% | |
| GAAACTAATGTGCCTACTAA+TGG | + | chr8.4:18080662-18080681 | MS.gene063492:CDS | 35.0% | |
| GATGGAGGAAGAGAATAATA+AGG | + | chr8.4:18079686-18079705 | MS.gene063492:CDS | 35.0% | |
| GTTCTTGAAACAATGGTATC+TGG | + | chr8.4:18080371-18080390 | MS.gene063492:CDS | 35.0% | |
| GTTTGAGAAGAAAGATGAGA+AGG | + | chr8.4:18079959-18079978 | MS.gene063492:CDS | 35.0% | |
| TCATTGTCACCATCATCATT+CGG | - | chr8.4:18080263-18080282 | None:intergenic | 35.0% | |
| TTCGAGGAAAATGAGGATAA+TGG | + | chr8.4:18080755-18080774 | MS.gene063492:CDS | 35.0% | |
| TTCTCACTCTCAATTTGAGT+TGG | - | chr8.4:18080545-18080564 | None:intergenic | 35.0% | |
| ! | CCTCATTTTCCTCGAAATAT+TGG | - | chr8.4:18080751-18080770 | None:intergenic | 35.0% |
| ! | CGACTGTTATGGATTTTTGT+TGG | + | chr8.4:18079613-18079632 | MS.gene063492:CDS | 35.0% |
| ! | TGTTATGGATTTTTGTTGGG+CGG | + | chr8.4:18079617-18079636 | MS.gene063492:CDS | 35.0% |
| ! | TTCTCGAATACCGTATTTTC+GGG | + | chr8.4:18079399-18079418 | MS.gene063492:CDS | 35.0% |
| !! | CTGGTTGAAAGTTTTGATCT+GGG | - | chr8.4:18080869-18080888 | None:intergenic | 35.0% |
| !! | TCTGGTTGAAAGTTTTGATC+TGG | - | chr8.4:18080870-18080889 | None:intergenic | 35.0% |
| !!! | GAGTTTTATTGTGTGTTGTG+TGG | + | chr8.4:18079981-18080000 | MS.gene063492:CDS | 35.0% |
| !!! | TACATTTGGTTTTCTTCCTC+TGG | - | chr8.4:18080888-18080907 | None:intergenic | 35.0% |
| AAAGAGAAGGGTGGGAAAAA+TGG | + | chr8.4:18080635-18080654 | MS.gene063492:CDS | 40.0% | |
| AAGAGAAGGGTGGGAAAAAT+GGG | + | chr8.4:18080636-18080655 | MS.gene063492:CDS | 40.0% | |
| ACGTAGAGCAAAGAAAGAGA+AGG | + | chr8.4:18080622-18080641 | MS.gene063492:CDS | 40.0% | |
| AGAAGAGGATTTGAGAACGA+TGG | - | chr8.4:18079329-18079348 | None:intergenic | 40.0% | |
| AGAGGAGAGATTAGAAAGTG+AGG | + | chr8.4:18080151-18080170 | MS.gene063492:CDS | 40.0% | |
| AGATTAGAAAGTGAGGAGGA+TGG | + | chr8.4:18080158-18080177 | MS.gene063492:CDS | 40.0% | |
| ATCCGAAAACCCCGAAAATA+CGG | - | chr8.4:18079412-18079431 | None:intergenic | 40.0% | |
| CGTAGAGCAAAGAAAGAGAA+GGG | + | chr8.4:18080623-18080642 | MS.gene063492:CDS | 40.0% | |
| CTATCCAAATTCCCCATAAG+AGG | - | chr8.4:18079546-18079565 | None:intergenic | 40.0% | |
| GAAGAGGATTTGAGAACGAT+GGG | - | chr8.4:18079328-18079347 | None:intergenic | 40.0% | |
| GAATAATAAGGTGAGGAGGA+AGG | + | chr8.4:18079698-18079717 | MS.gene063492:CDS | 40.0% | |
| GAGAAAAACGAAAACAGGTC+AGG | - | chr8.4:18079384-18079403 | None:intergenic | 40.0% | |
| GAGAGTGAGAATGAGAATGA+TGG | + | chr8.4:18080554-18080573 | MS.gene063492:CDS | 40.0% | |
| GAGTGAGAATGAGAATGATG+GGG | + | chr8.4:18080556-18080575 | MS.gene063492:CDS | 40.0% | |
| GGTGAAGAAGAATTTGGAGA+TGG | + | chr8.4:18079800-18079819 | MS.gene063492:CDS | 40.0% | |
| TTCCGGTAAGGGTTTCTATA+AGG | + | chr8.4:18079431-18079450 | MS.gene063492:CDS | 40.0% | |
| TTGAATTTGGATCGGAGAAG+AGG | - | chr8.4:18079344-18079363 | None:intergenic | 40.0% | |
| ! | AGGGATTGATTCTGTTAGAC+AGG | + | chr8.4:18079518-18079537 | MS.gene063492:CDS | 40.0% |
| ! | GAGGAAAATGAGGATAATGG+CGG | + | chr8.4:18080758-18080777 | MS.gene063492:CDS | 40.0% |
| ! | GTCTAGTTCCCAATATTTCG+AGG | + | chr8.4:18080739-18080758 | MS.gene063492:CDS | 40.0% |
| ! | GTTGGGATTTTCGACTGTTA+TGG | + | chr8.4:18079602-18079621 | MS.gene063492:CDS | 40.0% |
| ! | TCTCGAATACCGTATTTTCG+GGG | + | chr8.4:18079400-18079419 | MS.gene063492:CDS | 40.0% |
| ! | TGAGCAGAGTAAGAAGCATA+AGG | + | chr8.4:18080040-18080059 | MS.gene063492:CDS | 40.0% |
| !! | GGATTCACTTGATGATGAAG+AGG | + | chr8.4:18080082-18080101 | MS.gene063492:CDS | 40.0% |
| !! | GGCTGATTTTGTGAAGAAGA+GGG | + | chr8.4:18079755-18079774 | MS.gene063492:CDS | 40.0% |
| !! | GGTTGATGAAGAAGAAGTTG+AGG | + | chr8.4:18079917-18079936 | MS.gene063492:CDS | 40.0% |
| !! | TACCGTATTTTCGGGGTTTT+CGG | + | chr8.4:18079407-18079426 | MS.gene063492:CDS | 40.0% |
| !! | TGGCTGATTTTGTGAAGAAG+AGG | + | chr8.4:18079754-18079773 | MS.gene063492:CDS | 40.0% |
| !!! | GCTCTACGTTTCTTTTTTGC+AGG | - | chr8.4:18080611-18080630 | None:intergenic | 40.0% |
| AACAATGGTATCTGGGCACA+AGG | + | chr8.4:18080379-18080398 | MS.gene063492:CDS | 45.0% | |
| AAGAACTCCGATCAGCTTAC+CGG | + | chr8.4:18079166-18079185 | MS.gene063492:CDS | 45.0% | |
| ACAATGGTATCTGGGCACAA+GGG | + | chr8.4:18080380-18080399 | MS.gene063492:CDS | 45.0% | |
| ACGAGGAAGGTGAAAGTGAA+GGG | + | chr8.4:18080123-18080142 | MS.gene063492:CDS | 45.0% | |
| AGAGAAGGGTGGGAAAAATG+GGG | + | chr8.4:18080637-18080656 | MS.gene063492:CDS | 45.0% | |
| AGAGCAAAGAAAGAGAAGGG+TGG | + | chr8.4:18080626-18080645 | MS.gene063492:CDS | 45.0% | |
| AGAGGAGTTAGAAGCTGAAG+TGG | + | chr8.4:18080100-18080119 | MS.gene063492:CDS | 45.0% | |
| AGTTGGAGTTTCAGAAGCCT+CGG | - | chr8.4:18080528-18080547 | None:intergenic | 45.0% | |
| GAAGAAGAAAGAGGAGGAGA+AGG | + | chr8.4:18079824-18079843 | MS.gene063492:CDS | 45.0% | |
| GAGCAAAGAAAGAGAAGGGT+GGG | + | chr8.4:18080627-18080646 | MS.gene063492:CDS | 45.0% | |
| GATGGAGAAGAAGAAAGAGG+AGG | + | chr8.4:18079818-18079837 | MS.gene063492:CDS | 45.0% | |
| GCACAATACAGGAACAGAAC+AGG | - | chr8.4:18080931-18080950 | None:intergenic | 45.0% | |
| GGAGAAAGTTGCTGAGTTCA+AGG | + | chr8.4:18080061-18080080 | MS.gene063492:CDS | 45.0% | |
| GGAGAGATTAGAAAGTGAGG+AGG | + | chr8.4:18080154-18080173 | MS.gene063492:CDS | 45.0% | |
| GGAGATGGAGAAGAAGAAAG+AGG | + | chr8.4:18079815-18079834 | MS.gene063492:CDS | 45.0% | |
| GGTAAAGAGAATGAGCAGGT+GGG | + | chr8.4:18080779-18080798 | MS.gene063492:CDS | 45.0% | |
| GTTAGACAGGCTCCTCTTAT+GGG | + | chr8.4:18079531-18079550 | MS.gene063492:CDS | 45.0% | |
| TAAGCTGATCGGAGTTCTTC+CGG | - | chr8.4:18079165-18079184 | None:intergenic | 45.0% | |
| TAGTCCTTATGCGCAGGTTA+CGG | + | chr8.4:18079563-18079582 | MS.gene063492:CDS | 45.0% | |
| TCATCAACCTTAGCCCAATC+AGG | - | chr8.4:18079906-18079925 | None:intergenic | 45.0% | |
| TGTTAGACAGGCTCCTCTTA+TGG | + | chr8.4:18079530-18079549 | MS.gene063492:CDS | 45.0% | |
| TTAGACAGGCTCCTCTTATG+GGG | + | chr8.4:18079532-18079551 | MS.gene063492:CDS | 45.0% | |
| TTGTAGCTCCTGAAACTGAG+CGG | - | chr8.4:18079256-18079275 | None:intergenic | 45.0% | |
| TTTGGATAGTCCTTATGCGC+AGG | + | chr8.4:18079557-18079576 | MS.gene063492:CDS | 45.0% | |
| ! | AGAAGACGAGAGTGCAAATG+GGG | + | chr8.4:18080232-18080251 | MS.gene063492:CDS | 45.0% |
| ! | CAGAAGACGAGAGTGCAAAT+GGG | + | chr8.4:18080231-18080250 | MS.gene063492:CDS | 45.0% |
| ! | CTGATTTGACGAGCTTGTCA+GGG | - | chr8.4:18079212-18079231 | None:intergenic | 45.0% |
| ! | GAGAATGAGAATGATGGGGT+TGG | + | chr8.4:18080560-18080579 | MS.gene063492:CDS | 45.0% |
| !! | TTTTCGGGGTTTTCGGATTC+CGG | + | chr8.4:18079414-18079433 | MS.gene063492:CDS | 45.0% |
| AAAGCCGTAACCTGCGCATA+AGG | - | chr8.4:18079570-18079589 | None:intergenic | 50.0% | |
| AAAGTGAGGAGGATGGCGTT+GGG | + | chr8.4:18080165-18080184 | MS.gene063492:CDS | 50.0% | |
| AACCTCCGCGACTTCCTATT+CGG | - | chr8.4:18079666-18079685 | None:intergenic | 50.0% | |
| AGAAAGAGGAGGAGAAGGAG+AGG | + | chr8.4:18079829-18079848 | MS.gene063492:CDS | 50.0% | |
| AGAGGAAGTTGGAGATGGAG+AGG | + | chr8.4:18079853-18079872 | MS.gene063492:CDS | 50.0% | |
| ATTTGACGAGCTTGTCAGGG+TGG | - | chr8.4:18079209-18079228 | None:intergenic | 50.0% | |
| CCAAGCTCGTTCCTTTGGAT+CGG | - | chr8.4:18079298-18079317 | None:intergenic | 50.0% | |
| CCTGACAAGCTCGTCAAATC+AGG | + | chr8.4:18079210-18079229 | MS.gene063492:CDS | 50.0% | |
| CGAAAACAGGTCAGGGACAA+CGG | - | chr8.4:18079376-18079395 | None:intergenic | 50.0% | |
| CGAGGAAGGTGAAAGTGAAG+GGG | + | chr8.4:18080124-18080143 | MS.gene063492:CDS | 50.0% | |
| CGAGTTTCCGGTAAGCTGAT+CGG | - | chr8.4:18079176-18079195 | None:intergenic | 50.0% | |
| CGATGCCACTACGAAGTTCT+CGG | + | chr8.4:18079120-18079139 | MS.gene063492:CDS | 50.0% | |
| CGGTAAAGAGAATGAGCAGG+TGG | + | chr8.4:18080778-18080797 | MS.gene063492:CDS | 50.0% | |
| GAAGGAGAGGAAGAGGAAGT+TGG | + | chr8.4:18079842-18079861 | MS.gene063492:CDS | 50.0% | |
| GAAGGTGAAAGTGAAGGGGT+TGG | + | chr8.4:18080128-18080147 | MS.gene063492:CDS | 50.0% | |
| GAAGTTGGAGATGGAGAGGA+AGG | + | chr8.4:18079857-18079876 | MS.gene063492:CDS | 50.0% | |
| GACGAGGAAGGTGAAAGTGA+AGG | + | chr8.4:18080122-18080141 | MS.gene063492:CDS | 50.0% | |
| GAGGAAGAGGAAGTTGGAGA+TGG | + | chr8.4:18079848-18079867 | MS.gene063492:CDS | 50.0% | |
| GATGAGTATGATGCGATGGC+AGG | + | chr8.4:18079639-18079658 | MS.gene063492:CDS | 50.0% | |
| GGCTCCTCTTATGGGGAATT+TGG | + | chr8.4:18079539-18079558 | MS.gene063492:CDS | 50.0% | |
| GGCTTATGAGGAGCCTGATT+GGG | + | chr8.4:18079890-18079909 | MS.gene063492:CDS | 50.0% | |
| GTAGACCGAGAACTTCGTAG+TGG | - | chr8.4:18079128-18079147 | None:intergenic | 50.0% | |
| GTTAGAAGCTGAAGTGGACG+AGG | + | chr8.4:18080106-18080125 | MS.gene063492:CDS | 50.0% | |
| GTTCTTGAAGCAATGCTGGC+TGG | + | chr8.4:18080464-18080483 | MS.gene063492:CDS | 50.0% | |
| GTTGGAGTTTCAGAAGCCTC+GGG | - | chr8.4:18080527-18080546 | None:intergenic | 50.0% | |
| TCGTACCAAGCTCGTTCCTT+TGG | - | chr8.4:18079303-18079322 | None:intergenic | 50.0% | |
| TGAAAGTGAAGGGGTTGGAG+AGG | + | chr8.4:18080133-18080152 | MS.gene063492:CDS | 50.0% | |
| TGCTGAGCATGCAGAAGATG+AGG | + | chr8.4:18080295-18080314 | MS.gene063492:CDS | 50.0% | |
| TGGCGGTAAAGAGAATGAGC+AGG | + | chr8.4:18080775-18080794 | MS.gene063492:CDS | 50.0% | |
| TGGCTTATGAGGAGCCTGAT+TGG | + | chr8.4:18079889-18079908 | MS.gene063492:CDS | 50.0% | |
| TGGGGTTCTTGAAGCAATGC+TGG | + | chr8.4:18080460-18080479 | MS.gene063492:CDS | 50.0% | |
| ! | CCTGATTTGACGAGCTTGTC+AGG | - | chr8.4:18079213-18079232 | None:intergenic | 50.0% |
| ! | GCAGAAGACGAGAGTGCAAA+TGG | + | chr8.4:18080230-18080249 | MS.gene063492:CDS | 50.0% |
| ! | GGCTTGTGTGTTGAAGCACT+GGG | - | chr8.4:18080506-18080525 | None:intergenic | 50.0% |
| ! | GGGTTTTCGGATTCCGGTAA+GGG | + | chr8.4:18079420-18079439 | MS.gene063492:CDS | 50.0% |
| ! | TGAGGTACTCTCCGATCCAA+AGG | + | chr8.4:18079284-18079303 | MS.gene063492:CDS | 50.0% |
| !! | GAATGATGGGGTTGGTGCTA+TGG | + | chr8.4:18080568-18080587 | MS.gene063492:CDS | 50.0% |
| !! | TGGATCGGAGAGTACCTCAT+AGG | - | chr8.4:18079283-18079302 | None:intergenic | 50.0% |
| !! | TGGCGTTGGGGTTGATGATT+TGG | + | chr8.4:18080178-18080197 | MS.gene063492:CDS | 50.0% |
| AAGTGAGGAGGATGGCGTTG+GGG | + | chr8.4:18080166-18080185 | MS.gene063492:CDS | 55.0% | |
| AGGAGGAGAAGGAGAGGAAG+AGG | + | chr8.4:18079835-18079854 | MS.gene063492:CDS | 55.0% | |
| ATGCGATGGCAGGTCCGAAT+AGG | + | chr8.4:18079649-18079668 | MS.gene063492:CDS | 55.0% | |
| CAGGTCCGAATAGGAAGTCG+CGG | + | chr8.4:18079658-18079677 | MS.gene063492:CDS | 55.0% | |
| CCGATCCAAAGGAACGAGCT+TGG | + | chr8.4:18079295-18079314 | MS.gene063492:CDS | 55.0% | |
| CTGAAACTGAGCGGTGGCTT+CGG | - | chr8.4:18079247-18079266 | None:intergenic | 55.0% | |
| GAAAGTGAGGAGGATGGCGT+TGG | + | chr8.4:18080164-18080183 | MS.gene063492:CDS | 55.0% | |
| GAAGCTGAAGTGGACGAGGA+AGG | + | chr8.4:18080110-18080129 | MS.gene063492:CDS | 55.0% | |
| GGAGAGGGCTATGGCTTATG+AGG | + | chr8.4:18079878-18079897 | MS.gene063492:CDS | 55.0% | |
| GGAGATGGAGAGGAAGGAGA+GGG | + | chr8.4:18079863-18079882 | MS.gene063492:CDS | 55.0% | |
| GGAGCTACAACACGCCTATG+AGG | + | chr8.4:18079266-18079285 | MS.gene063492:CDS | 55.0% | |
| GGCGGATGAGTATGATGCGA+TGG | + | chr8.4:18079635-18079654 | MS.gene063492:CDS | 55.0% | |
| GGGCTTGTGTGTTGAAGCAC+TGG | - | chr8.4:18080507-18080526 | None:intergenic | 55.0% | |
| GGGGTTGAGCCGAATGATGA+TGG | + | chr8.4:18080251-18080270 | MS.gene063492:CDS | 55.0% | |
| TAGCTCCTGAAACTGAGCGG+TGG | - | chr8.4:18079253-18079272 | None:intergenic | 55.0% | |
| TAGGAAGTCGCGGAGGTTGA+TGG | + | chr8.4:18079668-18079687 | MS.gene063492:CDS | 55.0% | |
| TCTACCTCGCGAATGCTCAC+CGG | + | chr8.4:18079143-18079162 | MS.gene063492:CDS | 55.0% | |
| TGAGGAGCCTGATTGGGCTA+AGG | + | chr8.4:18079896-18079915 | MS.gene063492:CDS | 55.0% | |
| TGCTTCAACACACAAGCCCG+AGG | + | chr8.4:18080508-18080527 | MS.gene063492:CDS | 55.0% | |
| TGGAGATGGAGAGGAAGGAG+AGG | + | chr8.4:18079862-18079881 | MS.gene063492:CDS | 55.0% | |
| ! | GGGGTTTTCGGATTCCGGTA+AGG | + | chr8.4:18079419-18079438 | MS.gene063492:CDS | 55.0% |
| AGGTGAGGAGGAAGGCGAAG+AGG | + | chr8.4:18079706-18079725 | MS.gene063492:CDS | 60.0% | |
| CGAAGCCACCGCTCAGTTTC+AGG | + | chr8.4:18079245-18079264 | MS.gene063492:CDS | 60.0% | |
| CGGTGGCTTCGGATTGAGAG+AGG | - | chr8.4:18079236-18079255 | None:intergenic | 60.0% | |
| GGAGAGGAAGGAGAGGGCTA+TGG | + | chr8.4:18079869-18079888 | MS.gene063492:CDS | 60.0% | |
| GGTGAGGAGGAAGGCGAAGA+GGG | + | chr8.4:18079707-18079726 | MS.gene063492:CDS | 60.0% | |
| GTCCGAATAGGAAGTCGCGG+AGG | + | chr8.4:18079661-18079680 | MS.gene063492:CDS | 60.0% | |
| TCTTCCGGTGAGCATTCGCG+AGG | - | chr8.4:18079150-18079169 | None:intergenic | 60.0% | |
| TGGTATCTGGGCACAAGGGC+CGG | + | chr8.4:18080384-18080403 | MS.gene063492:CDS | 60.0% | |
| ! | GGCGTTGGAGAGCGAGTTTC+CGG | - | chr8.4:18079188-18079207 | None:intergenic | 60.0% |
| !! | GAAGTCGCGGAGGTTGATGG+AGG | + | chr8.4:18079671-18079690 | MS.gene063492:CDS | 60.0% |
| CGAGCTTGTCAGGGTGGCGT+TGG | - | chr8.4:18079203-18079222 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 18079102 | 18080955 | 18079102 | ID=MS.gene063492 |
| chr8.4 | mRNA | 18079102 | 18080955 | 18079102 | ID=MS.gene063492.t1;Parent=MS.gene063492 |
| chr8.4 | exon | 18079102 | 18080955 | 18079102 | ID=MS.gene063492.t1.exon1;Parent=MS.gene063492.t1 |
| chr8.4 | CDS | 18079102 | 18080955 | 18079102 | ID=cds.MS.gene063492.t1;Parent=MS.gene063492.t1 |
| Gene Sequence |
| Protein sequence |
