Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066543.t1 | KHN04035.1 | 52.4 | 424 | 63 | 1 | 1 | 285 | 1 | 424 | 2.00E-103 | 385.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066543.t1 | Q32L78 | 47.5 | 139 | 55 | 1 | 36 | 174 | 35 | 155 | 4.9e-29 | 129.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066543.t1 | A2Q3F3 | 100.0 | 167 | 0 | 0 | 1 | 167 | 1 | 167 | 1.4e-90 | 342.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene066543 | 0.842556 | 2.41E-58 | -1.69E-46 |
| MS.gene049350 | MS.gene066543 | 0.802426 | 5.64E-49 | -1.69E-46 |
| MS.gene049756 | MS.gene066543 | 0.824548 | 7.60E-54 | -1.69E-46 |
| MS.gene04984 | MS.gene066543 | 0.81276 | 3.60E-51 | -1.69E-46 |
| MS.gene049887 | MS.gene066543 | 0.837221 | 5.91E-57 | -1.69E-46 |
| MS.gene050085 | MS.gene066543 | 0.811433 | 7.02E-51 | -1.69E-46 |
| MS.gene050277 | MS.gene066543 | 0.813295 | 2.75E-51 | -1.69E-46 |
| MS.gene050317 | MS.gene066543 | 0.821148 | 4.71E-53 | -1.69E-46 |
| MS.gene050437 | MS.gene066543 | 0.834887 | 2.31E-56 | -1.69E-46 |
| MS.gene050689 | MS.gene066543 | 0.801567 | 8.47E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene066543 | 0.800585 | 1.34E-48 | -1.69E-46 |
| MS.gene050721 | MS.gene066543 | 0.800242 | 1.58E-48 | -1.69E-46 |
| MS.gene050724 | MS.gene066543 | 0.805929 | 1.05E-49 | -1.69E-46 |
| MS.gene050735 | MS.gene066543 | 0.808415 | 3.13E-50 | -1.69E-46 |
| MS.gene050752 | MS.gene066543 | 0.812468 | 4.18E-51 | -1.69E-46 |
| MS.gene050762 | MS.gene066543 | 0.802396 | 5.72E-49 | -1.69E-46 |
| MS.gene050763 | MS.gene066543 | 0.801625 | 8.24E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene066543 | 0.817689 | 2.90E-52 | -1.69E-46 |
| MS.gene051003 | MS.gene066543 | 0.81896 | 1.49E-52 | -1.69E-46 |
| MS.gene051243 | MS.gene066543 | 0.809596 | 1.75E-50 | -1.69E-46 |
| MS.gene051245 | MS.gene066543 | 0.801529 | 8.63E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene066543 | 0.806836 | 6.78E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene066543 | 0.854089 | 1.55E-61 | -1.69E-46 |
| MS.gene051700 | MS.gene066543 | 0.802206 | 6.26E-49 | -1.69E-46 |
| MS.gene051757 | MS.gene066543 | 0.811858 | 5.67E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene066543 | 0.80452 | 2.08E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene066543 | 0.805915 | 1.06E-49 | -1.69E-46 |
| MS.gene052133 | MS.gene066543 | 0.801167 | 1.02E-48 | -1.69E-46 |
| MS.gene052397 | MS.gene066543 | 0.804933 | 1.70E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene066543 | 0.811916 | 5.51E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene066543 | 0.805893 | 1.07E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene066543 | 0.804365 | 2.24E-49 | -1.69E-46 |
| MS.gene054403 | MS.gene066543 | 0.807332 | 5.32E-50 | -1.69E-46 |
| MS.gene054943 | MS.gene066543 | 0.80468 | 1.92E-49 | -1.69E-46 |
| MS.gene055311 | MS.gene066543 | 0.828256 | 9.95E-55 | -1.69E-46 |
| MS.gene055313 | MS.gene066543 | 0.81828 | 2.13E-52 | -1.69E-46 |
| MS.gene055314 | MS.gene066543 | 0.813382 | 2.63E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene066543 | 0.825349 | 4.92E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene066543 | 0.807706 | 4.43E-50 | -1.69E-46 |
| MS.gene055623 | MS.gene066543 | 0.803359 | 3.62E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene066543 | 0.80573 | 1.16E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene066543 | 0.815671 | 8.20E-52 | -1.69E-46 |
| MS.gene056432 | MS.gene066543 | 0.80486 | 1.76E-49 | -1.69E-46 |
| MS.gene056580 | MS.gene066543 | 0.809028 | 2.32E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene066543 | 0.817195 | 3.74E-52 | -1.69E-46 |
| MS.gene056760 | MS.gene066543 | 0.824377 | 8.34E-54 | -1.69E-46 |
| MS.gene056787 | MS.gene066543 | 0.843303 | 1.52E-58 | -1.69E-46 |
| MS.gene057057 | MS.gene066543 | 0.805574 | 1.25E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene066543 | 0.819764 | 9.78E-53 | -1.69E-46 |
| MS.gene057234 | MS.gene066543 | 0.815296 | 9.94E-52 | -1.69E-46 |
| MS.gene057360 | MS.gene066543 | 0.82033 | 7.26E-53 | -1.69E-46 |
| MS.gene057694 | MS.gene066543 | 0.800644 | 1.31E-48 | -1.69E-46 |
| MS.gene058055 | MS.gene066543 | 0.802391 | 5.74E-49 | -1.69E-46 |
| MS.gene058238 | MS.gene066543 | 0.824703 | 6.99E-54 | -1.69E-46 |
| MS.gene058638 | MS.gene066543 | 0.809026 | 2.32E-50 | -1.69E-46 |
| MS.gene058639 | MS.gene066543 | 0.830118 | 3.52E-55 | -1.69E-46 |
| MS.gene058646 | MS.gene066543 | 0.800322 | 1.52E-48 | -1.69E-46 |
| MS.gene058852 | MS.gene066543 | 0.821108 | 4.81E-53 | -1.69E-46 |
| MS.gene058906 | MS.gene066543 | 0.83233 | 1.01E-55 | -1.69E-46 |
| MS.gene059171 | MS.gene066543 | 0.838414 | 2.92E-57 | -1.69E-46 |
| MS.gene059965 | MS.gene066543 | 0.805161 | 1.53E-49 | -1.69E-46 |
| MS.gene06001 | MS.gene066543 | 0.822724 | 2.03E-53 | -1.69E-46 |
| MS.gene060296 | MS.gene066543 | 0.811267 | 7.62E-51 | -1.69E-46 |
| MS.gene060637 | MS.gene066543 | 0.811858 | 5.67E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066543.t1 | MTR_7g114210 | 100.000 | 167 | 0 | 0 | 1 | 167 | 1 | 167 | 1.67e-125 | 355 |
| MS.gene066543.t1 | MTR_7g114190 | 69.231 | 91 | 18 | 1 | 205 | 285 | 43 | 133 | 1.98e-34 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066543.t1 | AT3G05000 | 82.036 | 167 | 27 | 2 | 1 | 167 | 1 | 164 | 8.38e-99 | 287 |
Find 75 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATGGAGATTACGATAAT+TGG | 0.205655 | 7.1:+2410783 | MS.gene066543:CDS |
| ATTCACATGTTCCAATTTAT+AGG | 0.218618 | 7.1:-2412759 | None:intergenic |
| TTTCTTTGTCTGTGGATCTT+TGG | 0.261348 | 7.1:+2412688 | MS.gene066543:CDS |
| TCTACGGGATGCCTATAAAT+TGG | 0.278023 | 7.1:+2412748 | MS.gene066543:CDS |
| GCCTCGGTTTGGTGATCATT+TGG | 0.323253 | 7.1:+2408877 | MS.gene066543:CDS |
| CTATTAATAGCTCATTCTAT+TGG | 0.345139 | 7.1:+2412620 | MS.gene066543:CDS |
| GATCGAAGCCATTGGTTATC+AGG | 0.347972 | 7.1:+2408487 | MS.gene066543:CDS |
| CAACTTCTGTGTCCAAAGTT+TGG | 0.354956 | 7.1:+2412662 | MS.gene066543:CDS |
| ATCCTGCGAGCAGCGAGTTC+AGG | 0.362814 | 7.1:-2408467 | None:intergenic |
| CTATCAAGAGAAGGCAGGCC+AGG | 0.367650 | 7.1:-2412725 | None:intergenic |
| TTCCCATGCGGGATCATTAG+AGG | 0.368149 | 7.1:+2409241 | MS.gene066543:CDS |
| GATATACGATGGAGCGGCCT+CGG | 0.415640 | 7.1:+2408861 | MS.gene066543:intron |
| TGCCTTCTCTTGATAGTCTA+CGG | 0.416455 | 7.1:+2412732 | MS.gene066543:CDS |
| GGTCTGTTGCTCACATACTA+TGG | 0.417778 | 7.1:+2410804 | MS.gene066543:CDS |
| ACAAAGAAACCGCCAAACTT+TGG | 0.419497 | 7.1:-2412674 | None:intergenic |
| TAGAGGAGCTCTTTCCAACT+TGG | 0.425869 | 7.1:+2409258 | MS.gene066543:CDS |
| CATTCTCAGTGACATGGTTC+AGG | 0.428796 | 7.1:+2412105 | MS.gene066543:CDS |
| TGCACCTACGGCTGAAAGTA+AGG | 0.438829 | 7.1:+2409189 | MS.gene066543:CDS |
| AGAGAAGGCAGGCCAGGGAT+TGG | 0.451583 | 7.1:-2412719 | None:intergenic |
| GGCACAGGGTGCTGATATAG+TGG | 0.455519 | 7.1:+2412132 | MS.gene066543:CDS |
| GGCAATTAAGTTCATTTGCA+AGG | 0.458740 | 7.1:+2408901 | MS.gene066543:CDS |
| AGCAGCGAGTTCAGGTTTGT+TGG | 0.468848 | 7.1:-2408459 | None:intergenic |
| CAAACTTTGGACACAGAAGT+TGG | 0.474027 | 7.1:-2412661 | None:intergenic |
| TGCTGATATAGTGGAGTTCA+AGG | 0.476947 | 7.1:+2412141 | MS.gene066543:CDS |
| CTTCTGTGTCCAAAGTTTGG+CGG | 0.483215 | 7.1:+2412665 | MS.gene066543:CDS |
| CTGAGAATGAGCTCCACAAC+AGG | 0.486808 | 7.1:-2412091 | None:intergenic |
| GGCTGAAAGTAAGGCAGCAC+AGG | 0.488115 | 7.1:+2409198 | MS.gene066543:CDS |
| ACGATGGAGCGGCCTCGGTT+TGG | 0.496970 | 7.1:+2408866 | MS.gene066543:CDS |
| ATAAATTTCCGTGGCTTGCA+CGG | 0.497008 | 7.1:+2409116 | MS.gene066543:CDS |
| AGAGGAGCTCTTTCCAACTT+GGG | 0.498177 | 7.1:+2409259 | MS.gene066543:CDS |
| CATGGTTCAGGCAAAGGCAC+AGG | 0.504185 | 7.1:+2412117 | MS.gene066543:CDS |
| GCCTTCTCTTGATAGTCTAC+GGG | 0.508927 | 7.1:+2412733 | MS.gene066543:CDS |
| TGCATCTTTATTTCCCATGC+GGG | 0.509752 | 7.1:+2409230 | MS.gene066543:CDS |
| TCCGTGGCTTGCACGGATGT+CGG | 0.520572 | 7.1:+2409123 | MS.gene066543:CDS |
| TCGGTTTGGTGATCATTTGG+AGG | 0.520959 | 7.1:+2408880 | MS.gene066543:CDS |
| CAGTGACATGGTTCAGGCAA+AGG | 0.525377 | 7.1:+2412111 | MS.gene066543:CDS |
| ACAACTTGAAAACTAACCAT+AGG | 0.528003 | 7.1:+2408957 | MS.gene066543:CDS |
| AACCTGAACTCGCTGCTCGC+AGG | 0.543806 | 7.1:+2408465 | MS.gene066543:CDS |
| CAACTTGAAAACTAACCATA+GGG | 0.547452 | 7.1:+2408958 | MS.gene066543:CDS |
| TTGGCAAGAAATCCAATCCC+TGG | 0.548937 | 7.1:+2412707 | MS.gene066543:CDS |
| TGATAATGTTAGTTCAGTTG+AGG | 0.553497 | 7.1:+2409159 | MS.gene066543:CDS |
| TGCACAGGGAATTCCCAAGT+TGG | 0.556321 | 7.1:-2409272 | None:intergenic |
| TGAGGATTATTCTGCACCTA+CGG | 0.558019 | 7.1:+2409177 | MS.gene066543:CDS |
| GCTGCCTTACTTTCAGCCGT+AGG | 0.558260 | 7.1:-2409193 | None:intergenic |
| ACCGACATCCGTGCAAGCCA+CGG | 0.566327 | 7.1:-2409124 | None:intergenic |
| TATGTCTGCAGAAACTGCAC+AGG | 0.568585 | 7.1:-2409287 | None:intergenic |
| TTCAGAGAGTGAAAATGGTG+AGG | 0.569906 | 7.1:+2408366 | None:intergenic |
| GAACTAACATTATCAGTGGA+TGG | 0.571137 | 7.1:-2409151 | None:intergenic |
| TTTGGCGGTTTCTTTGTCTG+TGG | 0.571348 | 7.1:+2412680 | MS.gene066543:CDS |
| TATCAAGAGAAGGCAGGCCA+GGG | 0.582217 | 7.1:-2412724 | None:intergenic |
| GCTCATTCTATTGGAGAAAG+CGG | 0.584405 | 7.1:+2412629 | MS.gene066543:CDS |
| CACAGTTCAACAACCTGTTG+TGG | 0.586275 | 7.1:+2412078 | MS.gene066543:intron |
| TTGCGTTGATAGCTTGATGA+CGG | 0.587460 | 7.1:+2408403 | MS.gene066543:CDS |
| GGAGCTCATTCTCAGTGACA+TGG | 0.589823 | 7.1:+2412099 | MS.gene066543:CDS |
| GCTCCTCTAATGATCCCGCA+TGG | 0.591236 | 7.1:-2409244 | None:intergenic |
| GTGCACTGTTGAAAGACAAT+GGG | 0.593198 | 7.1:+2410826 | MS.gene066543:CDS |
| CTCCTCTAATGATCCCGCAT+GGG | 0.596153 | 7.1:-2409243 | None:intergenic |
| TGCAAGATAATAAATTTCCG+TGG | 0.603647 | 7.1:+2409107 | MS.gene066543:CDS |
| TCAGAGAGTGAAAATGGTGA+GGG | 0.605160 | 7.1:+2408367 | None:intergenic |
| TCGGTCAACAGCTCTCTGAA+AGG | 0.608978 | 7.1:+2408510 | MS.gene066543:CDS |
| TCCCGTAGACTATCAAGAGA+AGG | 0.610553 | 7.1:-2412734 | None:intergenic |
| GCTCGCAGGATCGAAGCCAT+TGG | 0.613190 | 7.1:+2408479 | MS.gene066543:CDS |
| GTAGACTATCAAGAGAAGGC+AGG | 0.613961 | 7.1:-2412730 | None:intergenic |
| GGGGATACACACATGCTGGA+AGG | 0.619761 | 7.1:-2409315 | None:intergenic |
| GAAGCCATTGGTTATCAGGT+CGG | 0.622295 | 7.1:+2408491 | MS.gene066543:CDS |
| AACTGAACTAACATTATCAG+TGG | 0.624516 | 7.1:-2409155 | None:intergenic |
| TTGACCGACCTGATAACCAA+TGG | 0.626958 | 7.1:-2408495 | None:intergenic |
| TGTGTAATTCAGATATACGA+TGG | 0.627817 | 7.1:+2408850 | MS.gene066543:intron |
| TGATAGCTTGATGACGGAGA+TGG | 0.641800 | 7.1:+2408409 | MS.gene066543:CDS |
| ATGGTTCAGGCAAAGGCACA+GGG | 0.644734 | 7.1:+2412118 | MS.gene066543:CDS |
| ATGCATCTTTATTTCCCATG+CGG | 0.650443 | 7.1:+2409229 | MS.gene066543:CDS |
| GGTGCACTGTTGAAAGACAA+TGG | 0.652678 | 7.1:+2410825 | MS.gene066543:CDS |
| AATTCAGATATACGATGGAG+CGG | 0.678919 | 7.1:+2408855 | MS.gene066543:intron |
| TCCAAATGATCACCAAACCG+AGG | 0.695841 | 7.1:-2408878 | None:intergenic |
| ATGTCTGCAGAAACTGCACA+GGG | 0.724210 | 7.1:-2409286 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+TGG | + | chr7.1:2409002-2409021 | MS.gene066543:intron | 0.0% |
| !! | ATTAGATTAAATTTATATGT+CGG | + | chr7.1:2410980-2410999 | MS.gene066543:intron | 10.0% |
| !!! | ATAAAATTACTTTTTTTTAG+CGG | + | chr7.1:2411229-2411248 | MS.gene066543:intron | 10.0% |
| !!! | TTCTTGATATTAATTATTTT+TGG | + | chr7.1:2408608-2408627 | MS.gene066543:intron | 10.0% |
| !!! | TTTTTTTTATAAAAAACTTC+AGG | - | chr7.1:2409931-2409950 | None:intergenic | 10.0% |
| !! | AAAAAGATTACTATTGTTAA+AGG | + | chr7.1:2411525-2411544 | MS.gene066543:intron | 15.0% |
| !! | AAATATGTAAACAAGATAAA+TGG | - | chr7.1:2410494-2410513 | None:intergenic | 15.0% |
| !! | AACTTCAATAATTTATTTGT+GGG | + | chr7.1:2411979-2411998 | MS.gene066543:intron | 15.0% |
| !! | ATGGAATAAAATTATTCAAA+AGG | + | chr7.1:2410041-2410060 | MS.gene066543:intron | 15.0% |
| !! | TATAATTATATAGCAGATAA+TGG | + | chr7.1:2411298-2411317 | MS.gene066543:intron | 15.0% |
| !!! | TGAATAATTTTATTCCATAA+TGG | - | chr7.1:2410039-2410058 | None:intergenic | 15.0% |
| !!! | TGATATTAATTATTTTTGGT+AGG | + | chr7.1:2408612-2408631 | MS.gene066543:intron | 15.0% |
| !! | AAAAACATCTTAAATGGATA+AGG | - | chr7.1:2411611-2411630 | None:intergenic | 20.0% |
| !! | ACGTTTATTATTAAACCAAA+AGG | - | chr7.1:2411054-2411073 | None:intergenic | 20.0% |
| !! | ATTTATCAAAACACTTCATT+TGG | - | chr7.1:2410734-2410753 | None:intergenic | 20.0% |
| !! | CAACTTCAATAATTTATTTG+TGG | + | chr7.1:2411978-2411997 | MS.gene066543:intron | 20.0% |
| !! | TAAGTTAAATATGACTATCA+TGG | - | chr7.1:2411814-2411833 | None:intergenic | 20.0% |
| !! | TCATGAAATTGTAATCAAAT+TGG | + | chr7.1:2408657-2408676 | MS.gene066543:intron | 20.0% |
| !! | TTATAAAGAAAAGTTCCATT+TGG | + | chr7.1:2411761-2411780 | MS.gene066543:intron | 20.0% |
| !!! | AAAGTTTCTTTGTTAGATTT+TGG | + | chr7.1:2409598-2409617 | MS.gene066543:intron | 20.0% |
| !!! | ACTTTTCTTTATAAATGACA+AGG | - | chr7.1:2411755-2411774 | None:intergenic | 20.0% |
| !!! | ATATCCTTTTACACATTATT+TGG | + | chr7.1:2410525-2410544 | MS.gene066543:intron | 20.0% |
| !!! | ATGAAGTGTTTTGATAAATT+AGG | + | chr7.1:2410735-2410754 | MS.gene066543:intron | 20.0% |
| !!! | TATGTCGGAAATATTTTATT+CGG | + | chr7.1:2410995-2411014 | MS.gene066543:intron | 20.0% |
| !!! | TTTTCATTTTTAGTGTTTTC+TGG | + | chr7.1:2409440-2409459 | MS.gene066543:intron | 20.0% |
| !!! | TTTTGATAAATTAGGACTTT+TGG | + | chr7.1:2410743-2410762 | MS.gene066543:intron | 20.0% |
| ! | AATGGTAAGAAATTCGTATA+TGG | + | chr7.1:2411496-2411515 | MS.gene066543:intron | 25.0% |
| ! | ACATAAAGTATAACTGTATG+AGG | + | chr7.1:2412558-2412577 | MS.gene066543:intron | 25.0% |
| ! | ACGTTGAATTTATCATTTCA+AGG | - | chr7.1:2411732-2411751 | None:intergenic | 25.0% |
| ! | AGATTACTATTGTTAAAGGA+TGG | + | chr7.1:2411529-2411548 | MS.gene066543:intron | 25.0% |
| ! | ATGAAACATAACTTCACTAT+TGG | + | chr7.1:2410222-2410241 | MS.gene066543:intron | 25.0% |
| ! | ATTCACATGTTCCAATTTAT+AGG | - | chr7.1:2412762-2412781 | None:intergenic | 25.0% |
| ! | CTATATATCTCTTTCCATTA+TGG | + | chr7.1:2410022-2410041 | MS.gene066543:intron | 25.0% |
| ! | CTATTAATAGCTCATTCTAT+TGG | + | chr7.1:2412620-2412639 | MS.gene066543:CDS | 25.0% |
| ! | CTTGATATGATATTCCTAAT+GGG | + | chr7.1:2411669-2411688 | MS.gene066543:intron | 25.0% |
| ! | GAATTGTTGAATGAAGAAAA+TGG | - | chr7.1:2411170-2411189 | None:intergenic | 25.0% |
| ! | GGTTGTAAAAACATCTTAAA+TGG | - | chr7.1:2411617-2411636 | None:intergenic | 25.0% |
| ! | TCACATATTCAATTTATACC+TGG | + | chr7.1:2410314-2410333 | MS.gene066543:intron | 25.0% |
| ! | TGTGAATAATTTGATCTGTT+TGG | + | chr7.1:2409491-2409510 | MS.gene066543:intron | 25.0% |
| ! | TGTTTGGAAATGTTTAAACA+GGG | + | chr7.1:2409507-2409526 | MS.gene066543:intron | 25.0% |
| ! | TTATTGATCAAATCTCTGTT+AGG | + | chr7.1:2409629-2409648 | MS.gene066543:intron | 25.0% |
| !! | AAATCTTCTTTTCAGACATA+TGG | + | chr7.1:2412008-2412027 | MS.gene066543:intron | 25.0% |
| !! | ACTATCAAATACTATTGACT+TGG | + | chr7.1:2410692-2410711 | MS.gene066543:intron | 25.0% |
| !! | ATTTTCTCGAATTACTACAT+AGG | - | chr7.1:2408725-2408744 | None:intergenic | 25.0% |
| !! | CATAGAAGAGAAGATTTTTA+AGG | + | chr7.1:2409402-2409421 | MS.gene066543:intron | 25.0% |
| !! | GAACTTATCATGCTTTTATA+CGG | - | chr7.1:2410567-2410586 | None:intergenic | 25.0% |
| !! | TAGTCATATTTAACTTATCG+TGG | + | chr7.1:2411817-2411836 | MS.gene066543:intron | 25.0% |
| !! | TTATTCTTTAGCAAACCTTT+TGG | + | chr7.1:2411036-2411055 | MS.gene066543:intron | 25.0% |
| !!! | GAACATGTAATTGGTTTTAA+TGG | + | chr7.1:2411478-2411497 | MS.gene066543:intron | 25.0% |
| !!! | TTTTTGTGTTTTGATTTCCA+TGG | + | chr7.1:2409047-2409066 | MS.gene066543:intron | 25.0% |
| AACTGAACTAACATTATCAG+TGG | - | chr7.1:2409158-2409177 | None:intergenic | 30.0% | |
| AATGTTATATCCCTCTTGTA+TGG | + | chr7.1:2410864-2410883 | MS.gene066543:intron | 30.0% | |
| ACAACTTGAAAACTAACCAT+AGG | + | chr7.1:2408957-2408976 | MS.gene066543:CDS | 30.0% | |
| AGATGAAGAAAGAGAGAATT+AGG | - | chr7.1:2408551-2408570 | None:intergenic | 30.0% | |
| AGCAAATATCCGATAACTAA+CGG | + | chr7.1:2411335-2411354 | MS.gene066543:intron | 30.0% | |
| ATGCTATTAGTGACAAAGAT+TGG | - | chr7.1:2412262-2412281 | None:intergenic | 30.0% | |
| CAAATTGTTACTGTGATTTG+TGG | + | chr7.1:2412049-2412068 | MS.gene066543:intron | 30.0% | |
| CAACTTGAAAACTAACCATA+GGG | + | chr7.1:2408958-2408977 | MS.gene066543:CDS | 30.0% | |
| CCTTCAATTTGTGTCAAATA+CGG | + | chr7.1:2410421-2410440 | MS.gene066543:intron | 30.0% | |
| CTATGGTAAATAACCAAGAA+GGG | + | chr7.1:2409740-2409759 | MS.gene066543:intron | 30.0% | |
| CTGTTTGGAAATGTTTAAAC+AGG | + | chr7.1:2409506-2409525 | MS.gene066543:intron | 30.0% | |
| CTTAGTGACATGATTATCAT+TGG | - | chr7.1:2409979-2409998 | None:intergenic | 30.0% | |
| GATGAAGAAAGAGAGAATTA+GGG | - | chr7.1:2408550-2408569 | None:intergenic | 30.0% | |
| GCTTGATATGATATTCCTAA+TGG | + | chr7.1:2411668-2411687 | MS.gene066543:intron | 30.0% | |
| TAGAGTAGTTCATACTCAAT+GGG | + | chr7.1:2409532-2409551 | MS.gene066543:intron | 30.0% | |
| TATGGTAAATAACCAAGAAG+GGG | + | chr7.1:2409741-2409760 | MS.gene066543:intron | 30.0% | |
| TCGCAACAAACACTTTAATA+AGG | - | chr7.1:2411460-2411479 | None:intergenic | 30.0% | |
| TCTATGGTAAATAACCAAGA+AGG | + | chr7.1:2409739-2409758 | MS.gene066543:intron | 30.0% | |
| TCTGTATGATGATCATATGT+TGG | - | chr7.1:2411952-2411971 | None:intergenic | 30.0% | |
| TGAAATACACCGTTAGTTAT+CGG | - | chr7.1:2411347-2411366 | None:intergenic | 30.0% | |
| TGCAAGATAATAAATTTCCG+TGG | + | chr7.1:2409107-2409126 | MS.gene066543:CDS | 30.0% | |
| TGTGTAATTCAGATATACGA+TGG | + | chr7.1:2408850-2408869 | MS.gene066543:intron | 30.0% | |
| TTAGATGAGTCCAAAAACTT+TGG | - | chr7.1:2412792-2412811 | None:intergenic | 30.0% | |
| TTCAGACATATGGAAAGTTA+TGG | + | chr7.1:2412018-2412037 | MS.gene066543:intron | 30.0% | |
| TTCATGGAGATTACGATAAT+TGG | + | chr7.1:2410783-2410802 | MS.gene066543:CDS | 30.0% | |
| ! | AAGAGCTTAGCAGAAATTTT+CGG | - | chr7.1:2411638-2411657 | None:intergenic | 30.0% |
| ! | AATGCGAATACCAAAGTTTT+TGG | + | chr7.1:2412779-2412798 | MS.gene066543:CDS | 30.0% |
| ! | AGTTCATTTGCAAGGATTTT+TGG | + | chr7.1:2408909-2408928 | MS.gene066543:CDS | 30.0% |
| ! | ATTTCCATGGTTGTGTTATT+TGG | + | chr7.1:2409060-2409079 | MS.gene066543:intron | 30.0% |
| ! | TGATAATGTTAGTTCAGTTG+AGG | + | chr7.1:2409159-2409178 | MS.gene066543:CDS | 30.0% |
| ! | TGTTACTTGTGTTTCTTTAC+AGG | + | chr7.1:2410918-2410937 | MS.gene066543:intron | 30.0% |
| ! | TTTTCCTTTTCCTTTTTGTC+TGG | + | chr7.1:2410954-2410973 | MS.gene066543:intron | 30.0% |
| !! | AATTATTCAAAAGGTGCTGA+TGG | + | chr7.1:2410050-2410069 | MS.gene066543:intron | 30.0% |
| !! | ACTTCAGGTTTATTTCTAAC+TGG | - | chr7.1:2409916-2409935 | None:intergenic | 30.0% |
| !!! | ATTAGGACTTTTGGTTCTTT+TGG | + | chr7.1:2410752-2410771 | MS.gene066543:intron | 30.0% |
| AACATAACTTCACTATTGGC+AGG | + | chr7.1:2410226-2410245 | MS.gene066543:intron | 35.0% | |
| AAGAAAATGTATCAGCACAC+AGG | + | chr7.1:2412283-2412302 | MS.gene066543:intron | 35.0% | |
| AATGCTTATGCCTGACAATA+AGG | - | chr7.1:2412498-2412517 | None:intergenic | 35.0% | |
| AATTCAGATATACGATGGAG+CGG | + | chr7.1:2408855-2408874 | MS.gene066543:intron | 35.0% | |
| ACAATAACAACATGTACTCC+AGG | - | chr7.1:2410335-2410354 | None:intergenic | 35.0% | |
| ACAGTCTGTCATGAATAGAT+AGG | - | chr7.1:2410380-2410399 | None:intergenic | 35.0% | |
| ACATGATCAAGACATCAAGT+TGG | - | chr7.1:2411791-2411810 | None:intergenic | 35.0% | |
| ACTTGAATTACTGATGTGAG+GGG | + | chr7.1:2410587-2410606 | MS.gene066543:intron | 35.0% | |
| AGAACCAAATAACACAACCA+TGG | - | chr7.1:2409067-2409086 | None:intergenic | 35.0% | |
| AGAGCAAATAGAAAGATGCT+TGG | - | chr7.1:2410449-2410468 | None:intergenic | 35.0% | |
| AGGCATAAGCATTTCTTTAG+AGG | + | chr7.1:2412505-2412524 | MS.gene066543:intron | 35.0% | |
| AGTATAACTGTATGAGGACT+TGG | + | chr7.1:2412564-2412583 | MS.gene066543:intron | 35.0% | |
| ATCTAATCCTCCAGACAAAA+AGG | - | chr7.1:2410967-2410986 | None:intergenic | 35.0% | |
| CAAGATAAATGGTCATGCAT+TGG | - | chr7.1:2410483-2410502 | None:intergenic | 35.0% | |
| CACTTGAATTACTGATGTGA+GGG | + | chr7.1:2410586-2410605 | MS.gene066543:intron | 35.0% | |
| CAGTCTGTCATGAATAGATA+GGG | - | chr7.1:2410379-2410398 | None:intergenic | 35.0% | |
| CATCATTGTCTGATTCTCTA+TGG | + | chr7.1:2409723-2409742 | MS.gene066543:intron | 35.0% | |
| CCGTATTTGACACAAATTGA+AGG | - | chr7.1:2410424-2410443 | None:intergenic | 35.0% | |
| CCTGCCAAATAATGTGTAAA+AGG | - | chr7.1:2410532-2410551 | None:intergenic | 35.0% | |
| CTAGAGTAGTTCATACTCAA+TGG | + | chr7.1:2409531-2409550 | MS.gene066543:intron | 35.0% | |
| CTGTTATCACACAACATAGT+AGG | + | chr7.1:2408575-2408594 | MS.gene066543:intron | 35.0% | |
| GAACTAACATTATCAGTGGA+TGG | - | chr7.1:2409154-2409173 | None:intergenic | 35.0% | |
| GGCAATTAAGTTCATTTGCA+AGG | + | chr7.1:2408901-2408920 | MS.gene066543:CDS | 35.0% | |
| GGCATAAGCATTTCTTTAGA+GGG | + | chr7.1:2412506-2412525 | MS.gene066543:intron | 35.0% | |
| TCACAAAACTATCTGTGATC+AGG | + | chr7.1:2409854-2409873 | MS.gene066543:intron | 35.0% | |
| TCACTTGAATTACTGATGTG+AGG | + | chr7.1:2410585-2410604 | MS.gene066543:intron | 35.0% | |
| TTTCTTTGTCTGTGGATCTT+TGG | + | chr7.1:2412688-2412707 | MS.gene066543:CDS | 35.0% | |
| ! | ATGCATCTTTATTTCCCATG+CGG | + | chr7.1:2409229-2409248 | MS.gene066543:CDS | 35.0% |
| ! | ATTAGAGCATCTCATGATTC+AGG | + | chr7.1:2410182-2410201 | MS.gene066543:intron | 35.0% |
| ! | CCTTTTACACATTATTTGGC+AGG | + | chr7.1:2410529-2410548 | MS.gene066543:intron | 35.0% |
| ! | GTTTGTTGCGAACATGTAAT+TGG | + | chr7.1:2411469-2411488 | MS.gene066543:intron | 35.0% |
| ! | TATTAGCCTAAGATGCATAC+AGG | - | chr7.1:2410252-2410271 | None:intergenic | 35.0% |
| ! | TGATTTTGTCCCAAATTTGC+TGG | + | chr7.1:2410639-2410658 | MS.gene066543:intron | 35.0% |
| !! | CAGGTTTATTTCTAACTGGA+GGG | - | chr7.1:2409912-2409931 | None:intergenic | 35.0% |
| !! | TCAGGTTTATTTCTAACTGG+AGG | - | chr7.1:2409913-2409932 | None:intergenic | 35.0% |
| !! | TGACTTGGTTGTATAGAAAG+AGG | + | chr7.1:2410707-2410726 | MS.gene066543:intron | 35.0% |
| AACCAATTCAACTCACCCTA+TGG | - | chr7.1:2408976-2408995 | None:intergenic | 40.0% | |
| AAGGAATTTGCATGCTGCAA+TGG | - | chr7.1:2410405-2410424 | None:intergenic | 40.0% | |
| AATTATTGCGTCCTGCTTTG+GGG | + | chr7.1:2412334-2412353 | MS.gene066543:intron | 40.0% | |
| ACAAAGAAACCGCCAAACTT+TGG | - | chr7.1:2412677-2412696 | None:intergenic | 40.0% | |
| AGCATTCGTTCCATACAAGA+GGG | - | chr7.1:2410877-2410896 | None:intergenic | 40.0% | |
| ATACGAGGATGAATACAGCT+AGG | - | chr7.1:2411901-2411920 | None:intergenic | 40.0% | |
| ATGGGGTTTCTACTATTGTG+GGG | + | chr7.1:2409775-2409794 | MS.gene066543:intron | 40.0% | |
| CAAACTTTGGACACAGAAGT+TGG | - | chr7.1:2412664-2412683 | None:intergenic | 40.0% | |
| CAACTTCTGTGTCCAAAGTT+TGG | + | chr7.1:2412662-2412681 | MS.gene066543:CDS | 40.0% | |
| CAATTATTGCGTCCTGCTTT+GGG | + | chr7.1:2412333-2412352 | MS.gene066543:intron | 40.0% | |
| CATGGGGTTTCTACTATTGT+GGG | + | chr7.1:2409774-2409793 | MS.gene066543:intron | 40.0% | |
| GAATGTAGTCACATGTGTCA+GGG | + | chr7.1:2408754-2408773 | MS.gene066543:intron | 40.0% | |
| GCTCAAGTTTAACTCATACG+AGG | - | chr7.1:2411916-2411935 | None:intergenic | 40.0% | |
| GCTCATTCTATTGGAGAAAG+CGG | + | chr7.1:2412629-2412648 | MS.gene066543:CDS | 40.0% | |
| GTGCACTGTTGAAAGACAAT+GGG | + | chr7.1:2410826-2410845 | MS.gene066543:CDS | 40.0% | |
| TACGAGGATGAATACAGCTA+GGG | - | chr7.1:2411900-2411919 | None:intergenic | 40.0% | |
| TAGCATTCGTTCCATACAAG+AGG | - | chr7.1:2410878-2410897 | None:intergenic | 40.0% | |
| TCCTCCAGACAAAAAGGAAA+AGG | - | chr7.1:2410961-2410980 | None:intergenic | 40.0% | |
| TCTACGGGATGCCTATAAAT+TGG | + | chr7.1:2412748-2412767 | MS.gene066543:CDS | 40.0% | |
| TGAATGTAGTCACATGTGTC+AGG | + | chr7.1:2408753-2408772 | MS.gene066543:intron | 40.0% | |
| TGAGGATTATTCTGCACCTA+CGG | + | chr7.1:2409177-2409196 | MS.gene066543:CDS | 40.0% | |
| TGGTAGACACTCGTAGTTAT+TGG | + | chr7.1:2411837-2411856 | MS.gene066543:intron | 40.0% | |
| ! | AACCATAGGGTGAGTTGAAT+TGG | + | chr7.1:2408971-2408990 | MS.gene066543:intron | 40.0% |
| ! | ATAAATTTCCGTGGCTTGCA+CGG | + | chr7.1:2409116-2409135 | MS.gene066543:CDS | 40.0% |
| ! | CAGCTTGTTTCCTTATTGTC+AGG | + | chr7.1:2412485-2412504 | MS.gene066543:intron | 40.0% |
| ! | GCAGCTGCAACTTTTCTAAT+TGG | + | chr7.1:2411695-2411714 | MS.gene066543:intron | 40.0% |
| ! | GTCAGATAGGTTATGATGGA+TGG | + | chr7.1:2408776-2408795 | MS.gene066543:intron | 40.0% |
| ! | TCCTTTTCCTTTTTGTCTGG+AGG | + | chr7.1:2410957-2410976 | MS.gene066543:intron | 40.0% |
| ! | TGCATCTTTATTTCCCATGC+GGG | + | chr7.1:2409230-2409249 | MS.gene066543:CDS | 40.0% |
| ! | TGCCTTCTCTTGATAGTCTA+CGG | + | chr7.1:2412732-2412751 | MS.gene066543:CDS | 40.0% |
| ! | TGCTGATATAGTGGAGTTCA+AGG | + | chr7.1:2412141-2412160 | MS.gene066543:CDS | 40.0% |
| !! | AAAAGGTGCTGATGGTAAAG+TGG | + | chr7.1:2410058-2410077 | MS.gene066543:intron | 40.0% |
| !! | CATCAAGTTGGTAGACCAAA+TGG | - | chr7.1:2411779-2411798 | None:intergenic | 40.0% |
| !! | TACTATTGTGGGGGTTGATA+TGG | + | chr7.1:2409785-2409804 | MS.gene066543:intron | 40.0% |
| !! | TCTTTTGGCTGCAGATTTCA+TGG | + | chr7.1:2410767-2410786 | MS.gene066543:intron | 40.0% |
| !! | TGTTATTTGGTTCTGCTGCA+GGG | + | chr7.1:2409073-2409092 | MS.gene066543:intron | 40.0% |
| !! | TTGCGTTGATAGCTTGATGA+CGG | + | chr7.1:2408403-2408422 | MS.gene066543:CDS | 40.0% |
| !! | TTTAGCCTTAACCCTATGAG+TGG | + | chr7.1:2409818-2409837 | MS.gene066543:intron | 40.0% |
| !!! | TTGCAAGGATTTTTGGTCTG+AGG | + | chr7.1:2408916-2408935 | MS.gene066543:CDS | 40.0% |
| ACTACATAGGTCGTGCTTCA+TGG | - | chr7.1:2408712-2408731 | None:intergenic | 45.0% | |
| AGAGAGAAAGAGAGGGAGAT+GGG | - | chr7.1:2409340-2409359 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAAAGAG+AGG | - | chr7.1:2409348-2409367 | None:intergenic | 45.0% | |
| AGAGGAGCTCTTTCCAACTT+GGG | + | chr7.1:2409259-2409278 | MS.gene066543:CDS | 45.0% | |
| ATGTCTGCAGAAACTGCACA+GGG | - | chr7.1:2409289-2409308 | None:intergenic | 45.0% | |
| ATTCCCCACTCCAGCAAATT+TGG | - | chr7.1:2410652-2410671 | None:intergenic | 45.0% | |
| CACAGTTCAACAACCTGTTG+TGG | + | chr7.1:2412078-2412097 | MS.gene066543:intron | 45.0% | |
| CAGGGTCAGATAGGTTATGA+TGG | + | chr7.1:2408772-2408791 | MS.gene066543:intron | 45.0% | |
| CATTCTCAGTGACATGGTTC+AGG | + | chr7.1:2412105-2412124 | MS.gene066543:CDS | 45.0% | |
| CCAAAGCAGGACGCAATAAT+TGG | - | chr7.1:2412335-2412354 | None:intergenic | 45.0% | |
| CCAATTATTGCGTCCTGCTT+TGG | + | chr7.1:2412332-2412351 | MS.gene066543:intron | 45.0% | |
| CTTCTGTGTCCAAAGTTTGG+CGG | + | chr7.1:2412665-2412684 | MS.gene066543:CDS | 45.0% | |
| GAGAGAGAGAGAGAAAGAGA+GGG | - | chr7.1:2409347-2409366 | None:intergenic | 45.0% | |
| GCATGGGGTTTCTACTATTG+TGG | + | chr7.1:2409773-2409792 | MS.gene066543:intron | 45.0% | |
| GGTCTGTTGCTCACATACTA+TGG | + | chr7.1:2410804-2410823 | MS.gene066543:CDS | 45.0% | |
| GGTGCACTGTTGAAAGACAA+TGG | + | chr7.1:2410825-2410844 | MS.gene066543:CDS | 45.0% | |
| GTACTGAAGCAACCAATGCA+GGG | - | chr7.1:2410115-2410134 | None:intergenic | 45.0% | |
| GTAGACTATCAAGAGAAGGC+AGG | - | chr7.1:2412733-2412752 | None:intergenic | 45.0% | |
| TACTGAAGCAACCAATGCAG+GGG | - | chr7.1:2410114-2410133 | None:intergenic | 45.0% | |
| TAGAGGAGCTCTTTCCAACT+TGG | + | chr7.1:2409258-2409277 | MS.gene066543:CDS | 45.0% | |
| TAGTAGAAACCCCATGCACT+AGG | - | chr7.1:2409770-2409789 | None:intergenic | 45.0% | |
| TATCATATCAAGCCGACGCT+TGG | - | chr7.1:2411661-2411680 | None:intergenic | 45.0% | |
| TATGTCTGCAGAAACTGCAC+AGG | - | chr7.1:2409290-2409309 | None:intergenic | 45.0% | |
| TCCAAATGATCACCAAACCG+AGG | - | chr7.1:2408881-2408900 | None:intergenic | 45.0% | |
| TCCCGTAGACTATCAAGAGA+AGG | - | chr7.1:2412737-2412756 | None:intergenic | 45.0% | |
| TGGGGTTTCTACTATTGTGG+GGG | + | chr7.1:2409776-2409795 | MS.gene066543:intron | 45.0% | |
| TGTACTGAAGCAACCAATGC+AGG | - | chr7.1:2410116-2410135 | None:intergenic | 45.0% | |
| TTCCCCACTCCAGCAAATTT+GGG | - | chr7.1:2410651-2410670 | None:intergenic | 45.0% | |
| TTGACCGACCTGATAACCAA+TGG | - | chr7.1:2408498-2408517 | None:intergenic | 45.0% | |
| TTGGCAAGAAATCCAATCCC+TGG | + | chr7.1:2412707-2412726 | MS.gene066543:CDS | 45.0% | |
| TTTGGCGGTTTCTTTGTCTG+TGG | + | chr7.1:2412680-2412699 | MS.gene066543:CDS | 45.0% | |
| ! | GAAGCCATTGGTTATCAGGT+CGG | + | chr7.1:2408491-2408510 | MS.gene066543:CDS | 45.0% |
| ! | GATCGAAGCCATTGGTTATC+AGG | + | chr7.1:2408487-2408506 | MS.gene066543:CDS | 45.0% |
| ! | GCCTTCTCTTGATAGTCTAC+GGG | + | chr7.1:2412733-2412752 | MS.gene066543:CDS | 45.0% |
| ! | TATCAGCACACAGGTCTTGT+CGG | + | chr7.1:2412292-2412311 | MS.gene066543:intron | 45.0% |
| ! | TCAACAGCTCTCTGAAAGGT+TGG | + | chr7.1:2408514-2408533 | MS.gene066543:intron | 45.0% |
| !! | GTGTTATTTGGTTCTGCTGC+AGG | + | chr7.1:2409072-2409091 | MS.gene066543:intron | 45.0% |
| !! | TCAACTTGTTGCACTCATGC+AGG | + | chr7.1:2412395-2412414 | MS.gene066543:intron | 45.0% |
| !! | TCGGTTTGGTGATCATTTGG+AGG | + | chr7.1:2408880-2408899 | MS.gene066543:CDS | 45.0% |
| !! | TGATAGCTTGATGACGGAGA+TGG | + | chr7.1:2408409-2408428 | MS.gene066543:CDS | 45.0% |
| !! | TGCATTGGTTGCTTCAGTAC+AGG | + | chr7.1:2410115-2410134 | MS.gene066543:intron | 45.0% |
| !! | TGTCCCAAATTTGCTGGAGT+GGG | + | chr7.1:2410645-2410664 | MS.gene066543:intron | 45.0% |
| !! | TTGTCCCAAATTTGCTGGAG+TGG | + | chr7.1:2410644-2410663 | MS.gene066543:intron | 45.0% |
| !!! | GATAGTTTTGTGACCCTCTC+AGG | - | chr7.1:2409847-2409866 | None:intergenic | 45.0% |
| !! | AATAAAAATATTGTTATAAA+TGG | + | chr7.1:2411107-2411126 | MS.gene066543:intron | 5.0% |
| AATTCTACCAGCCCCTGCAT+TGG | + | chr7.1:2410100-2410119 | MS.gene066543:intron | 50.0% | |
| AGAGAAAGAGAGGGAGATGG+GGG | - | chr7.1:2409338-2409357 | None:intergenic | 50.0% | |
| AGTGATACCATCCCCAAAGC+AGG | - | chr7.1:2412348-2412367 | None:intergenic | 50.0% | |
| CACATGTGTCAGGGTCAGAT+AGG | + | chr7.1:2408763-2408782 | MS.gene066543:intron | 50.0% | |
| CAGTGACATGGTTCAGGCAA+AGG | + | chr7.1:2412111-2412130 | MS.gene066543:CDS | 50.0% | |
| CTATGAGTGGAGACCTGAGA+GGG | + | chr7.1:2409831-2409850 | MS.gene066543:intron | 50.0% | |
| CTCCTCTAATGATCCCGCAT+GGG | - | chr7.1:2409246-2409265 | None:intergenic | 50.0% | |
| CTCTCAGGTCTCCACTCATA+GGG | - | chr7.1:2409832-2409851 | None:intergenic | 50.0% | |
| CTGAGAATGAGCTCCACAAC+AGG | - | chr7.1:2412094-2412113 | None:intergenic | 50.0% | |
| CTGCAAATCGTTACCAGAGC+AGG | - | chr7.1:2412597-2412616 | None:intergenic | 50.0% | |
| GAGAGAAAGAGAGGGAGATG+GGG | - | chr7.1:2409339-2409358 | None:intergenic | 50.0% | |
| GAGAGAGAAAGAGAGGGAGA+TGG | - | chr7.1:2409341-2409360 | None:intergenic | 50.0% | |
| GGAGCTCATTCTCAGTGACA+TGG | + | chr7.1:2412099-2412118 | MS.gene066543:CDS | 50.0% | |
| GGTCTCCACTCATAGGGTTA+AGG | - | chr7.1:2409826-2409845 | None:intergenic | 50.0% | |
| TATCAAGAGAAGGCAGGCCA+GGG | - | chr7.1:2412727-2412746 | None:intergenic | 50.0% | |
| TCGGTCAACAGCTCTCTGAA+AGG | + | chr7.1:2408510-2408529 | MS.gene066543:CDS | 50.0% | |
| TCTAACTGGAGGGTGAGACT+TGG | - | chr7.1:2409902-2409921 | None:intergenic | 50.0% | |
| TGCACAGGGAATTCCCAAGT+TGG | - | chr7.1:2409275-2409294 | None:intergenic | 50.0% | |
| TGCACCTACGGCTGAAAGTA+AGG | + | chr7.1:2409189-2409208 | MS.gene066543:CDS | 50.0% | |
| TGCTAAGCTCTTCCAAGCGT+CGG | + | chr7.1:2411646-2411665 | MS.gene066543:intron | 50.0% | |
| TTCCCATGCGGGATCATTAG+AGG | + | chr7.1:2409241-2409260 | MS.gene066543:CDS | 50.0% | |
| ! | ACTTGGTGATATGCCTGCTC+TGG | + | chr7.1:2412581-2412600 | MS.gene066543:intron | 50.0% |
| ! | AGCAGCGAGTTCAGGTTTGT+TGG | - | chr7.1:2408462-2408481 | None:intergenic | 50.0% |
| ! | ATGGTTCAGGCAAAGGCACA+GGG | + | chr7.1:2412118-2412137 | MS.gene066543:CDS | 50.0% |
| ! | CTGCTCTGGTAACGATTTGC+AGG | + | chr7.1:2412595-2412614 | MS.gene066543:intron | 50.0% |
| !! | GCCTCGGTTTGGTGATCATT+TGG | + | chr7.1:2408877-2408896 | MS.gene066543:CDS | 50.0% |
| !! | GTCCCAAATTTGCTGGAGTG+GGG | + | chr7.1:2410646-2410665 | MS.gene066543:intron | 50.0% |
| ATGGGGGGATACACACATGC+TGG | - | chr7.1:2409322-2409341 | None:intergenic | 55.0% | |
| CCTATGAGTGGAGACCTGAG+AGG | + | chr7.1:2409830-2409849 | MS.gene066543:intron | 55.0% | |
| CCTCTCAGGTCTCCACTCAT+AGG | - | chr7.1:2409833-2409852 | None:intergenic | 55.0% | |
| CTATCAAGAGAAGGCAGGCC+AGG | - | chr7.1:2412728-2412747 | None:intergenic | 55.0% | |
| GAGAAAGAGAGGGAGATGGG+GGG | - | chr7.1:2409337-2409356 | None:intergenic | 55.0% | |
| GATATACGATGGAGCGGCCT+CGG | + | chr7.1:2408861-2408880 | MS.gene066543:intron | 55.0% | |
| GCTCCTCTAATGATCCCGCA+TGG | - | chr7.1:2409247-2409266 | None:intergenic | 55.0% | |
| GCTGCCTTACTTTCAGCCGT+AGG | - | chr7.1:2409196-2409215 | None:intergenic | 55.0% | |
| GGCAGGCCTGTATGCATCTT+AGG | + | chr7.1:2410243-2410262 | MS.gene066543:intron | 55.0% | |
| GGCTGAAAGTAAGGCAGCAC+AGG | + | chr7.1:2409198-2409217 | MS.gene066543:CDS | 55.0% | |
| GGGGATACACACATGCTGGA+AGG | - | chr7.1:2409318-2409337 | None:intergenic | 55.0% | |
| GTTGCACTCATGCAGGCTAC+AGG | + | chr7.1:2412402-2412421 | MS.gene066543:intron | 55.0% | |
| GTTGCAGCTGCAGACCCATT+AGG | - | chr7.1:2411686-2411705 | None:intergenic | 55.0% | |
| ! | CATGGTTCAGGCAAAGGCAC+AGG | + | chr7.1:2412117-2412136 | MS.gene066543:CDS | 55.0% |
| !! | ATTGCGTCCTGCTTTGGGGA+TGG | + | chr7.1:2412338-2412357 | MS.gene066543:intron | 55.0% |
| !! | GGCACAGGGTGCTGATATAG+TGG | + | chr7.1:2412132-2412151 | MS.gene066543:CDS | 55.0% |
| AACCTGAACTCGCTGCTCGC+AGG | + | chr7.1:2408465-2408484 | MS.gene066543:CDS | 60.0% | |
| AAGGGGCAGCCTAGTGCATG+GGG | + | chr7.1:2409758-2409777 | MS.gene066543:intron | 60.0% | |
| ACCGACATCCGTGCAAGCCA+CGG | - | chr7.1:2409127-2409146 | None:intergenic | 60.0% | |
| AGAAGGGGCAGCCTAGTGCA+TGG | + | chr7.1:2409756-2409775 | MS.gene066543:intron | 60.0% | |
| AGAGAAGGCAGGCCAGGGAT+TGG | - | chr7.1:2412722-2412741 | None:intergenic | 60.0% | |
| ATCCTGCGAGCAGCGAGTTC+AGG | - | chr7.1:2408470-2408489 | None:intergenic | 60.0% | |
| GAAGCAACCAATGCAGGGGC+TGG | - | chr7.1:2410110-2410129 | None:intergenic | 60.0% | |
| GAAGGGGCAGCCTAGTGCAT+GGG | + | chr7.1:2409757-2409776 | MS.gene066543:intron | 60.0% | |
| GCTCGCAGGATCGAAGCCAT+TGG | + | chr7.1:2408479-2408498 | MS.gene066543:CDS | 60.0% | |
| TGCACTAGGCTGCCCCTTCT+TGG | - | chr7.1:2409756-2409775 | None:intergenic | 60.0% | |
| ! | TCCGTGGCTTGCACGGATGT+CGG | + | chr7.1:2409123-2409142 | MS.gene066543:CDS | 60.0% |
| ACGATGGAGCGGCCTCGGTT+TGG | + | chr7.1:2408866-2408885 | MS.gene066543:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 2408380 | 2412811 | 2408380 | ID=MS.gene066543 |
| chr7.1 | mRNA | 2408380 | 2412811 | 2408380 | ID=MS.gene066543.t1;Parent=MS.gene066543 |
| chr7.1 | exon | 2408380 | 2408531 | 2408380 | ID=MS.gene066543.t1.exon1;Parent=MS.gene066543.t1 |
| chr7.1 | CDS | 2408380 | 2408531 | 2408380 | ID=cds.MS.gene066543.t1;Parent=MS.gene066543.t1 |
| chr7.1 | exon | 2408862 | 2408979 | 2408862 | ID=MS.gene066543.t1.exon2;Parent=MS.gene066543.t1 |
| chr7.1 | CDS | 2408862 | 2408979 | 2408862 | ID=cds.MS.gene066543.t1;Parent=MS.gene066543.t1 |
| chr7.1 | exon | 2409094 | 2409325 | 2409094 | ID=MS.gene066543.t1.exon3;Parent=MS.gene066543.t1 |
| chr7.1 | CDS | 2409094 | 2409325 | 2409094 | ID=cds.MS.gene066543.t1;Parent=MS.gene066543.t1 |
| chr7.1 | exon | 2410781 | 2410861 | 2410781 | ID=MS.gene066543.t1.exon4;Parent=MS.gene066543.t1 |
| chr7.1 | CDS | 2410781 | 2410861 | 2410781 | ID=cds.MS.gene066543.t1;Parent=MS.gene066543.t1 |
| chr7.1 | exon | 2412083 | 2412162 | 2412083 | ID=MS.gene066543.t1.exon5;Parent=MS.gene066543.t1 |
| chr7.1 | CDS | 2412083 | 2412162 | 2412083 | ID=cds.MS.gene066543.t1;Parent=MS.gene066543.t1 |
| chr7.1 | exon | 2412617 | 2412811 | 2412617 | ID=MS.gene066543.t1.exon6;Parent=MS.gene066543.t1 |
| chr7.1 | CDS | 2412617 | 2412811 | 2412617 | ID=cds.MS.gene066543.t1;Parent=MS.gene066543.t1 |
| Gene Sequence |
| Protein sequence |
