Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071690.t1 | XP_003629527.2 | 100 | 160 | 0 | 0 | 1 | 160 | 496 | 655 | 8.80E-87 | 329.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071690.t1 | Q9SW80 | 90.8 | 153 | 12 | 1 | 1 | 151 | 416 | 568 | 3.2e-77 | 289.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071690.t1 | G7LFL6 | 100.0 | 160 | 0 | 0 | 1 | 160 | 496 | 655 | 6.4e-87 | 329.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene071690.t1 | TF | HB-BELL |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene071690 | 0.805093 | 1.58E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene071690 | 0.805908 | 1.06E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene071690 | 0.825181 | 5.39E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene071690 | 0.862808 | 3.90E-64 | -1.69E-46 |
| MS.gene049285 | MS.gene071690 | 0.806973 | 6.34E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene071690 | 0.808966 | 2.39E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene071690 | 0.814476 | 1.51E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene071690 | 0.806101 | 9.69E-50 | -1.69E-46 |
| MS.gene050216 | MS.gene071690 | 0.815213 | 1.04E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene071690 | 0.844692 | 6.46E-59 | -1.69E-46 |
| MS.gene050496 | MS.gene071690 | 0.818542 | 1.86E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene071690 | 0.835996 | 1.21E-56 | -1.69E-46 |
| MS.gene050577 | MS.gene071690 | 0.807837 | 4.16E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene071690 | 0.816732 | 4.75E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene071690 | 0.810403 | 1.17E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene071690 | 0.816444 | 5.51E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene071690 | 0.862108 | 6.40E-64 | -1.69E-46 |
| MS.gene050871 | MS.gene071690 | 0.865729 | 4.78E-65 | -1.69E-46 |
| MS.gene050904 | MS.gene071690 | 0.830403 | 3.00E-55 | -1.69E-46 |
| MS.gene050986 | MS.gene071690 | 0.811283 | 7.56E-51 | -1.69E-46 |
| MS.gene051268 | MS.gene071690 | 0.800272 | 1.56E-48 | -1.69E-46 |
| MS.gene051838 | MS.gene071690 | 0.80122 | 9.98E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene071690 | 0.834221 | 3.40E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene071690 | 0.813842 | 2.09E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene071690 | 0.823479 | 1.36E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene071690 | 0.863417 | 2.53E-64 | -1.69E-46 |
| MS.gene053203 | MS.gene071690 | 0.826551 | 2.55E-54 | -1.69E-46 |
| MS.gene053626 | MS.gene071690 | 0.820838 | 5.55E-53 | -1.69E-46 |
| MS.gene053633 | MS.gene071690 | 0.877445 | 6.25E-69 | -1.69E-46 |
| MS.gene053824 | MS.gene071690 | 0.806977 | 6.33E-50 | -1.69E-46 |
| MS.gene054003 | MS.gene071690 | 0.816499 | 5.36E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene071690 | 0.856077 | 4.11E-62 | -1.69E-46 |
| MS.gene054954 | MS.gene071690 | 0.820927 | 5.30E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene071690 | 0.823906 | 1.08E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene071690 | 0.837539 | 4.90E-57 | -1.69E-46 |
| MS.gene055750 | MS.gene071690 | 0.803676 | 3.11E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene071690 | 0.823372 | 1.44E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene071690 | 0.800994 | 1.11E-48 | -1.69E-46 |
| MS.gene056040 | MS.gene071690 | 0.814273 | 1.68E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene071690 | 0.831561 | 1.56E-55 | -1.69E-46 |
| MS.gene056387 | MS.gene071690 | 0.805145 | 1.54E-49 | -1.69E-46 |
| MS.gene056450 | MS.gene071690 | 0.804953 | 1.69E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene071690 | 0.847126 | 1.41E-59 | -1.69E-46 |
| MS.gene056510 | MS.gene071690 | 0.874213 | 8.05E-68 | -1.69E-46 |
| MS.gene057086 | MS.gene071690 | 0.814945 | 1.19E-51 | -1.69E-46 |
| MS.gene057872 | MS.gene071690 | 0.81589 | 7.33E-52 | -1.69E-46 |
| MS.gene05787 | MS.gene071690 | 0.830224 | 3.31E-55 | -1.69E-46 |
| MS.gene058157 | MS.gene071690 | 0.822736 | 2.02E-53 | -1.69E-46 |
| MS.gene058183 | MS.gene071690 | 0.804418 | 2.18E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene071690 | 0.827459 | 1.55E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene071690 | 0.814273 | 1.68E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene071690 | 0.811058 | 8.46E-51 | -1.69E-46 |
| MS.gene059023 | MS.gene071690 | 0.809021 | 2.32E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene071690 | 0.831596 | 1.53E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene071690 | 0.805072 | 1.59E-49 | -1.69E-46 |
| MS.gene059801 | MS.gene071690 | 0.804196 | 2.43E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene071690 | 0.822607 | 2.16E-53 | -1.69E-46 |
| MS.gene05996 | MS.gene071690 | 0.817677 | 2.91E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene071690 | 0.851068 | 1.13E-60 | -1.69E-46 |
| MS.gene060295 | MS.gene071690 | 0.831388 | 1.72E-55 | -1.69E-46 |
| MS.gene060482 | MS.gene071690 | 0.810419 | 1.16E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene071690 | 0.817479 | 3.23E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene071690 | 0.84842 | 6.20E-60 | -1.69E-46 |
| MS.gene06077 | MS.gene071690 | 0.823211 | 1.57E-53 | -1.69E-46 |
| MS.gene060982 | MS.gene071690 | 0.831817 | 1.35E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071690.t1 | MTR_8g078480 | 95.408 | 196 | 3 | 3 | 1 | 190 | 496 | 691 | 2.37e-130 | 385 |
| MS.gene071690.t1 | MTR_5g018860 | 84.444 | 180 | 21 | 3 | 1 | 180 | 445 | 617 | 2.58e-105 | 318 |
| MS.gene071690.t1 | MTR_8g098815 | 63.441 | 186 | 60 | 2 | 2 | 180 | 291 | 475 | 3.06e-73 | 232 |
| MS.gene071690.t1 | MTR_1g023050 | 63.291 | 158 | 47 | 2 | 2 | 159 | 288 | 434 | 4.72e-68 | 218 |
| MS.gene071690.t1 | MTR_7g106320 | 56.219 | 201 | 70 | 3 | 2 | 190 | 283 | 477 | 2.00e-63 | 207 |
| MS.gene071690.t1 | MTR_1g057790 | 62.275 | 167 | 58 | 2 | 2 | 167 | 271 | 433 | 1.17e-62 | 205 |
| MS.gene071690.t1 | MTR_3g112300 | 60.000 | 155 | 51 | 2 | 2 | 156 | 277 | 420 | 4.65e-62 | 200 |
| MS.gene071690.t1 | MTR_3g112300 | 60.000 | 155 | 51 | 2 | 2 | 156 | 277 | 420 | 1.00e-61 | 201 |
| MS.gene071690.t1 | MTR_4g051532 | 62.581 | 155 | 54 | 1 | 2 | 156 | 327 | 477 | 2.52e-59 | 197 |
| MS.gene071690.t1 | MTR_4g019450 | 55.814 | 172 | 64 | 5 | 2 | 170 | 288 | 450 | 4.23e-54 | 181 |
| MS.gene071690.t1 | MTR_2g095050 | 51.786 | 168 | 67 | 3 | 2 | 158 | 352 | 516 | 5.52e-54 | 181 |
| MS.gene071690.t1 | MTR_7g065050 | 50.262 | 191 | 79 | 5 | 2 | 189 | 233 | 410 | 3.86e-53 | 177 |
| MS.gene071690.t1 | MTR_3g112290 | 54.321 | 162 | 65 | 4 | 2 | 159 | 270 | 426 | 3.89e-51 | 170 |
| MS.gene071690.t1 | MTR_3g112300 | 57.812 | 128 | 43 | 2 | 2 | 129 | 277 | 393 | 1.50e-45 | 154 |
| MS.gene071690.t1 | MTR_1g016490 | 44.512 | 164 | 82 | 3 | 12 | 175 | 364 | 518 | 2.08e-39 | 140 |
| MS.gene071690.t1 | MTR_3g112300 | 55.660 | 106 | 36 | 2 | 2 | 107 | 277 | 371 | 3.03e-33 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071690.t1 | AT4G36870 | 90.789 | 152 | 12 | 1 | 1 | 150 | 416 | 567 | 7.39e-99 | 301 |
| MS.gene071690.t1 | AT4G36870 | 90.789 | 152 | 12 | 1 | 1 | 150 | 416 | 567 | 7.39e-99 | 301 |
| MS.gene071690.t1 | AT2G23760 | 88.742 | 151 | 15 | 1 | 1 | 149 | 342 | 492 | 1.16e-96 | 293 |
| MS.gene071690.t1 | AT2G23760 | 88.742 | 151 | 15 | 1 | 1 | 149 | 342 | 492 | 1.16e-96 | 293 |
| MS.gene071690.t1 | AT2G23760 | 88.742 | 151 | 15 | 1 | 1 | 149 | 342 | 492 | 1.16e-96 | 293 |
| MS.gene071690.t1 | AT2G23760 | 66.010 | 203 | 15 | 2 | 1 | 149 | 342 | 544 | 1.53e-86 | 268 |
| MS.gene071690.t1 | AT4G36870 | 90.076 | 131 | 11 | 1 | 1 | 129 | 416 | 546 | 3.19e-82 | 254 |
| MS.gene071690.t1 | AT4G36870 | 89.922 | 129 | 11 | 1 | 1 | 127 | 416 | 544 | 1.22e-80 | 250 |
| MS.gene071690.t1 | AT5G41410 | 64.516 | 155 | 53 | 1 | 1 | 153 | 309 | 463 | 5.51e-71 | 226 |
| MS.gene071690.t1 | AT2G16400 | 52.736 | 201 | 80 | 3 | 2 | 190 | 208 | 405 | 2.88e-66 | 211 |
| MS.gene071690.t1 | AT1G75410 | 58.721 | 172 | 67 | 2 | 2 | 172 | 270 | 438 | 2.23e-64 | 207 |
| MS.gene071690.t1 | AT1G75410 | 58.721 | 172 | 67 | 2 | 2 | 172 | 270 | 438 | 2.23e-64 | 207 |
| MS.gene071690.t1 | AT4G34610 | 60.606 | 165 | 59 | 2 | 2 | 166 | 241 | 399 | 9.53e-64 | 205 |
| MS.gene071690.t1 | AT4G34610 | 60.606 | 165 | 59 | 2 | 2 | 166 | 241 | 399 | 9.53e-64 | 205 |
| MS.gene071690.t1 | AT4G34610 | 60.606 | 165 | 59 | 2 | 2 | 166 | 241 | 399 | 9.53e-64 | 205 |
| MS.gene071690.t1 | AT4G34610 | 60.606 | 165 | 59 | 2 | 2 | 166 | 241 | 399 | 9.53e-64 | 205 |
| MS.gene071690.t1 | AT1G19700 | 60.927 | 151 | 59 | 0 | 2 | 152 | 272 | 422 | 6.34e-63 | 203 |
| MS.gene071690.t1 | AT1G19700 | 60.927 | 151 | 59 | 0 | 2 | 152 | 272 | 422 | 6.34e-63 | 203 |
| MS.gene071690.t1 | AT1G19700 | 60.927 | 151 | 59 | 0 | 2 | 152 | 272 | 422 | 6.34e-63 | 203 |
| MS.gene071690.t1 | AT1G19700 | 60.927 | 151 | 59 | 0 | 2 | 152 | 272 | 422 | 6.34e-63 | 203 |
| MS.gene071690.t1 | AT1G19700 | 60.927 | 151 | 59 | 0 | 2 | 152 | 272 | 422 | 6.34e-63 | 203 |
| MS.gene071690.t1 | AT2G35940 | 63.889 | 144 | 47 | 2 | 2 | 142 | 305 | 446 | 5.99e-61 | 201 |
| MS.gene071690.t1 | AT2G35940 | 63.889 | 144 | 47 | 2 | 2 | 142 | 305 | 446 | 5.99e-61 | 201 |
| MS.gene071690.t1 | AT2G35940 | 63.889 | 144 | 47 | 2 | 2 | 142 | 305 | 446 | 5.99e-61 | 201 |
| MS.gene071690.t1 | AT2G27220 | 44.324 | 185 | 82 | 3 | 2 | 185 | 169 | 333 | 6.38e-49 | 164 |
| MS.gene071690.t1 | AT2G27220 | 44.324 | 185 | 82 | 3 | 2 | 185 | 169 | 333 | 6.38e-49 | 164 |
| MS.gene071690.t1 | AT2G27220 | 44.324 | 185 | 82 | 3 | 2 | 185 | 187 | 351 | 8.08e-49 | 164 |
| MS.gene071690.t1 | AT5G02030 | 49.714 | 175 | 83 | 3 | 2 | 171 | 264 | 438 | 6.31e-47 | 162 |
| MS.gene071690.t1 | AT1G75410 | 59.055 | 127 | 49 | 1 | 2 | 128 | 270 | 393 | 6.65e-46 | 155 |
| MS.gene071690.t1 | AT1G75430 | 45.055 | 182 | 79 | 6 | 2 | 176 | 122 | 289 | 7.82e-46 | 152 |
| MS.gene071690.t1 | AT2G27990 | 49.342 | 152 | 65 | 2 | 2 | 153 | 357 | 496 | 1.13e-42 | 150 |
| MS.gene071690.t1 | AT4G32980 | 62.791 | 86 | 26 | 1 | 71 | 150 | 356 | 441 | 3.24e-36 | 131 |
| MS.gene071690.t1 | AT4G32980 | 62.791 | 86 | 26 | 1 | 71 | 150 | 356 | 441 | 3.24e-36 | 131 |
| MS.gene071690.t1 | AT1G75430 | 39.823 | 113 | 55 | 5 | 2 | 107 | 122 | 228 | 5.37e-16 | 74.3 |
| MS.gene071690.t1 | AT2G27990 | 37.736 | 106 | 54 | 2 | 2 | 107 | 357 | 450 | 2.78e-15 | 73.6 |
Find 40 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCCTTTAAACAACGAAAA+TGG | 0.277545 | 8.3:-25700168 | None:intergenic |
| GAGGGGACGAACCTGATTTC+TGG | 0.280748 | 8.3:-25702503 | None:intergenic |
| CTGCTTCTTTAAGTTCTTGT+TGG | 0.288835 | 8.3:-25705109 | None:intergenic |
| TTTGACCTAGTAATGGGATT+TGG | 0.310831 | 8.3:+25700100 | None:intergenic |
| AAACATAGTTGTGAGTTATT+AGG | 0.327586 | 8.3:+25700208 | MS.gene071690:CDS |
| AAGTCTTGGTGTCTCTCCTT+TGG | 0.365611 | 8.3:-25700263 | None:intergenic |
| GACTGGCCTTTCCAGAAATC+AGG | 0.378906 | 8.3:+25702492 | MS.gene071690:CDS |
| AAAGATGGTGTGGGGACCTC+AGG | 0.438346 | 8.3:+25700235 | MS.gene071690:CDS |
| TTAAATTTCAGGTATCAAAC+TGG | 0.439342 | 8.3:+25705036 | MS.gene071690:intron |
| TTGGTACATATCTTCTACCA+TGG | 0.451163 | 8.3:-25705090 | None:intergenic |
| CAAACTGGTTCATTAATGCT+AGG | 0.483717 | 8.3:+25705051 | MS.gene071690:CDS |
| TGTTCAAGAAGTTTAAGTCT+TGG | 0.486979 | 8.3:-25700277 | None:intergenic |
| TCAGATGGGGATGATGGAAC+AGG | 0.498142 | 8.3:+25700327 | MS.gene071690:CDS |
| CATCTCTTAGCAAGACAGAC+TGG | 0.501238 | 8.3:+25702475 | MS.gene071690:CDS |
| CAGAGAGCGTTTCATCAGAT+GGG | 0.502418 | 8.3:+25700313 | MS.gene071690:CDS |
| TTCTGAGCTAGTGCCGTGTA+TGG | 0.506424 | 8.3:-25700133 | None:intergenic |
| TGGTACATATCTTCTACCAT+GGG | 0.507788 | 8.3:-25705089 | None:intergenic |
| AAACTGGTTCATTAATGCTA+GGG | 0.511830 | 8.3:+25705052 | MS.gene071690:CDS |
| TTAATGCTAGGGTTCGTTTG+TGG | 0.512064 | 8.3:+25705063 | MS.gene071690:CDS |
| GCAGAGAGCGTTTCATCAGA+TGG | 0.518676 | 8.3:+25700312 | MS.gene071690:CDS |
| ATTAGGAGAGAAAGATGGTG+TGG | 0.521359 | 8.3:+25700225 | MS.gene071690:CDS |
| GGATGATGGAACAGGAAGCT+TGG | 0.521906 | 8.3:+25700335 | MS.gene071690:CDS |
| TTAGGAGAGAAAGATGGTGT+GGG | 0.523003 | 8.3:+25700226 | MS.gene071690:CDS |
| GTTTCATCAGATGGGGATGA+TGG | 0.541352 | 8.3:+25700321 | MS.gene071690:CDS |
| CTCTCCTTTGGTCAAACCTG+AGG | 0.552410 | 8.3:-25700251 | None:intergenic |
| GACGAACCTGATTTCTGGAA+AGG | 0.569168 | 8.3:-25702498 | None:intergenic |
| GGTTCGTTTGTGGAAACCCA+TGG | 0.569866 | 8.3:+25705073 | MS.gene071690:CDS |
| GAGTTATTAGGAGAGAAAGA+TGG | 0.571608 | 8.3:+25700220 | MS.gene071690:CDS |
| AGATGCTTATCTGCATCACT+CGG | 0.576320 | 8.3:-25702457 | None:intergenic |
| AGCAACAATAACAACACAAG+TGG | 0.587253 | 8.3:+25705179 | MS.gene071690:CDS |
| GAAGCAGAAGGATCATCAGA+AGG | 0.595951 | 8.3:+25705125 | MS.gene071690:CDS |
| TGGAGCAGCAGTTCCATACA+CGG | 0.601685 | 8.3:+25700120 | MS.gene071690:CDS |
| CAAGAACTTAAAGAAGCAGA+AGG | 0.605008 | 8.3:+25705113 | MS.gene071690:CDS |
| GGGACCTCAGGTTTGACCAA+AGG | 0.623532 | 8.3:+25700247 | MS.gene071690:CDS |
| GATGCTTATCTGCATCACTC+GGG | 0.627986 | 8.3:-25702456 | None:intergenic |
| AAAATGTTGACAGATCGTTC+AGG | 0.642438 | 8.3:-25700376 | None:intergenic |
| AGAGAGCGTTTCATCAGATG+GGG | 0.649369 | 8.3:+25700314 | MS.gene071690:CDS |
| TAGGAGAGAAAGATGGTGTG+GGG | 0.674914 | 8.3:+25700227 | MS.gene071690:CDS |
| CGTTCAGGCAAACCTCTCTG+TGG | 0.700077 | 8.3:-25700361 | None:intergenic |
| GAAGCTTGGAGACCACAGAG+AGG | 0.727720 | 8.3:+25700349 | MS.gene071690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTGGAAAATATTAATT+AGG | - | chr8.3:25703910-25703929 | None:intergenic | 10.0% |
| !! | TTTAACAATAAATATTACAT+AGG | + | chr8.3:25700494-25700513 | MS.gene071690:intron | 10.0% |
| !!! | AAATTTTTGTTTTCTTAAAT+GGG | + | chr8.3:25704319-25704338 | MS.gene071690:intron | 10.0% |
| !!! | ACTTTAAAGTTAATTAATAA+AGG | - | chr8.3:25701925-25701944 | None:intergenic | 10.0% |
| !!! | TAAATTTTTGTTTTCTTAAA+TGG | + | chr8.3:25704318-25704337 | MS.gene071690:intron | 10.0% |
| !! | AGAAACACAATAATAAATAA+AGG | - | chr8.3:25702817-25702836 | None:intergenic | 15.0% |
| !! | ATCTAAATTTCTAAATGTAA+GGG | - | chr8.3:25701349-25701368 | None:intergenic | 15.0% |
| !! | CATTAATAGATTTAAATGTA+GGG | - | chr8.3:25701564-25701583 | None:intergenic | 15.0% |
| !! | CTTATATATTGCTTAAATAA+TGG | - | chr8.3:25702111-25702130 | None:intergenic | 15.0% |
| !! | CTTCTTAATTAGTTAATTAA+CGG | - | chr8.3:25702033-25702052 | None:intergenic | 15.0% |
| !! | GAAACACAATAATAAATAAA+GGG | - | chr8.3:25702816-25702835 | None:intergenic | 15.0% |
| !! | GTCTTATATATATATATATG+TGG | - | chr8.3:25702549-25702568 | None:intergenic | 15.0% |
| !! | TATGTAATTATTACATCTAA+TGG | + | chr8.3:25700618-25700637 | MS.gene071690:intron | 15.0% |
| !! | TATTAAAACTTACGAAAAAT+AGG | - | chr8.3:25704576-25704595 | None:intergenic | 15.0% |
| !! | TTAACTAATTAAGAAGAAAA+AGG | + | chr8.3:25702037-25702056 | MS.gene071690:intron | 15.0% |
| !!! | AAATTTTTCACTTAAACTTA+AGG | - | chr8.3:25700802-25700821 | None:intergenic | 15.0% |
| !!! | AAGTTTCATTGTTTTTTTTT+TGG | + | chr8.3:25702717-25702736 | MS.gene071690:intron | 15.0% |
| !!! | AGTTTCATTGTTTTTTTTTT+GGG | + | chr8.3:25702718-25702737 | MS.gene071690:intron | 15.0% |
| !!! | ATATTAATGTATGTTTTGAT+AGG | - | chr8.3:25703007-25703026 | None:intergenic | 15.0% |
| !!! | CAGTTTTTTTTCTTAAAATT+AGG | - | chr8.3:25703731-25703750 | None:intergenic | 15.0% |
| !!! | TCATTTATTTTCCTTATTTA+TGG | - | chr8.3:25703250-25703269 | None:intergenic | 15.0% |
| !!! | TCTAAAATGTTCTATAAATT+TGG | - | chr8.3:25703925-25703944 | None:intergenic | 15.0% |
| !! | AAAACAATGAAACTTTCAAA+TGG | - | chr8.3:25702712-25702731 | None:intergenic | 20.0% |
| !! | AAATGACTTATCGTTTATAA+CGG | + | chr8.3:25704901-25704920 | MS.gene071690:intron | 20.0% |
| !! | AAATTAATTGCAGTTAAAAC+AGG | - | chr8.3:25702229-25702248 | None:intergenic | 20.0% |
| !! | AAATTATGAATGCAAAAGAA+GGG | + | chr8.3:25702685-25702704 | MS.gene071690:intron | 20.0% |
| !! | AACTAAATTAATTACATGCA+CGG | + | chr8.3:25702602-25702621 | MS.gene071690:intron | 20.0% |
| !! | AATCTCTAAATAATATTGGT+AGG | - | chr8.3:25701374-25701393 | None:intergenic | 20.0% |
| !! | AGCTCATATTATAATAATTG+TGG | + | chr8.3:25701800-25701819 | MS.gene071690:intron | 20.0% |
| !! | ATATGAGTGGAAATAAATTT+AGG | - | chr8.3:25701402-25701421 | None:intergenic | 20.0% |
| !! | ATTACATAGGATAAAAGAAT+GGG | + | chr8.3:25700507-25700526 | MS.gene071690:intron | 20.0% |
| !! | CAAAACATATGTTATATATG+GGG | - | chr8.3:25703798-25703817 | None:intergenic | 20.0% |
| !! | CCAAAACATATGTTATATAT+GGG | - | chr8.3:25703799-25703818 | None:intergenic | 20.0% |
| !! | CCATTAATAGATTTAAATGT+AGG | - | chr8.3:25701565-25701584 | None:intergenic | 20.0% |
| !! | CCTACATTTAAATCTATTAA+TGG | + | chr8.3:25701562-25701581 | MS.gene071690:intron | 20.0% |
| !! | CTCAAATCTCTAAATAATAT+TGG | - | chr8.3:25701378-25701397 | None:intergenic | 20.0% |
| !! | CTTATACTTATAGAAACTTT+AGG | - | chr8.3:25704231-25704250 | None:intergenic | 20.0% |
| !! | GATCTAAATTTCTAAATGTA+AGG | - | chr8.3:25701350-25701369 | None:intergenic | 20.0% |
| !! | TAAAAATGGAAGATAAGAAA+AGG | - | chr8.3:25702841-25702860 | None:intergenic | 20.0% |
| !! | TAGAGAGAAAAACAAATTTA+AGG | + | chr8.3:25701664-25701683 | MS.gene071690:intron | 20.0% |
| !! | TATTACATAGGATAAAAGAA+TGG | + | chr8.3:25700506-25700525 | MS.gene071690:intron | 20.0% |
| !! | TCCAAAACATATGTTATATA+TGG | - | chr8.3:25703800-25703819 | None:intergenic | 20.0% |
| !! | TCTAAATTTCTAAATGTAAG+GGG | - | chr8.3:25701348-25701367 | None:intergenic | 20.0% |
| !! | TCTATTCTTTCATATAACAT+AGG | + | chr8.3:25702884-25702903 | MS.gene071690:intron | 20.0% |
| !! | TGTATAGTAATATTAGAGAA+AGG | + | chr8.3:25702366-25702385 | MS.gene071690:intron | 20.0% |
| !!! | ACGTTTGTTGAAAATTAAAT+CGG | + | chr8.3:25704122-25704141 | MS.gene071690:intron | 20.0% |
| !!! | ATAAGATACTAGTTCTATTA+AGG | - | chr8.3:25703374-25703393 | None:intergenic | 20.0% |
| !!! | ATAATAAATAAAGGGTATGT+TGG | - | chr8.3:25702808-25702827 | None:intergenic | 20.0% |
| !!! | ATATATATATATGTGGATTG+TGG | - | chr8.3:25702542-25702561 | None:intergenic | 20.0% |
| !!! | TAAGATACTAGTTCTATTAA+GGG | - | chr8.3:25703373-25703392 | None:intergenic | 20.0% |
| !!! | TGTTTTGAAGAAAATATGAT+TGG | + | chr8.3:25703860-25703879 | MS.gene071690:intron | 20.0% |
| !!! | TTTTTCTTAAAATTAGGCTA+GGG | - | chr8.3:25703725-25703744 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTAAAATTAGGCT+AGG | - | chr8.3:25703726-25703745 | None:intergenic | 20.0% |
| ! | AAAACTTACGAAAAATAGGA+AGG | - | chr8.3:25704572-25704591 | None:intergenic | 25.0% |
| ! | AAACATAGTTGTGAGTTATT+AGG | + | chr8.3:25700208-25700227 | MS.gene071690:CDS | 25.0% |
| ! | AGGTAAATTCTTACATATCT+TGG | - | chr8.3:25703132-25703151 | None:intergenic | 25.0% |
| ! | ATAGGAAAAACTAAGTACAA+AGG | + | chr8.3:25704345-25704364 | MS.gene071690:intron | 25.0% |
| ! | ATCCAAATCTCTAAATGTAA+AGG | - | chr8.3:25701055-25701074 | None:intergenic | 25.0% |
| ! | ATCCAAATCTCTAAATGTAA+GGG | - | chr8.3:25701055-25701074 | None:intergenic | 25.0% |
| ! | ATCCAAATCTCTAATGTAAT+CGG | - | chr8.3:25700909-25700928 | None:intergenic | 25.0% |
| ! | ATCGAAATTTCTAAGTGTAA+AGG | - | chr8.3:25701497-25701516 | None:intergenic | 25.0% |
| ! | GAAATTATGAATGCAAAAGA+AGG | + | chr8.3:25702684-25702703 | MS.gene071690:intron | 25.0% |
| ! | GCTTATATAAAACACCAATT+AGG | - | chr8.3:25703585-25703604 | None:intergenic | 25.0% |
| ! | TAGGAAAAACTAAGTACAAA+GGG | + | chr8.3:25704346-25704365 | MS.gene071690:intron | 25.0% |
| ! | TCCAAATCTCTAAATGTAAA+GGG | - | chr8.3:25701054-25701073 | None:intergenic | 25.0% |
| ! | TCGAAATTTCTAAGTGTAAA+GGG | - | chr8.3:25701496-25701515 | None:intergenic | 25.0% |
| ! | TGATACTCATGAAAAAAGAT+AGG | - | chr8.3:25704691-25704710 | None:intergenic | 25.0% |
| ! | TGCATTCATAATTTCATACA+CGG | - | chr8.3:25702679-25702698 | None:intergenic | 25.0% |
| ! | TTCTTCTTTATCTTCCTAAT+TGG | + | chr8.3:25703568-25703587 | MS.gene071690:intron | 25.0% |
| ! | TTGTCTCACTATTGTATATA+TGG | - | chr8.3:25704021-25704040 | None:intergenic | 25.0% |
| !! | AACCAAACAGCTAAAATTTT+AGG | - | chr8.3:25703152-25703171 | None:intergenic | 25.0% |
| !! | AATTTAAAACCCTAGAGTAA+GGG | + | chr8.3:25700684-25700703 | MS.gene071690:intron | 25.0% |
| !! | ACGTAAGATTTTGCATTAAT+TGG | - | chr8.3:25703337-25703356 | None:intergenic | 25.0% |
| !! | ATTTTATCTCATTATGCATG+TGG | - | chr8.3:25702629-25702648 | None:intergenic | 25.0% |
| !! | CCCATATATAACATATGTTT+TGG | + | chr8.3:25703796-25703815 | MS.gene071690:intron | 25.0% |
| !! | CCTAATAATACTTTTGCTTT+TGG | + | chr8.3:25704832-25704851 | MS.gene071690:intron | 25.0% |
| !! | CGTAAGATTTTGCATTAATT+GGG | - | chr8.3:25703336-25703355 | None:intergenic | 25.0% |
| !! | CGTTTGTTGAAAATTAAATC+GGG | + | chr8.3:25704123-25704142 | MS.gene071690:intron | 25.0% |
| !! | CTAAAATAATGGCACAATTT+TGG | - | chr8.3:25704185-25704204 | None:intergenic | 25.0% |
| !! | GTTTTCTTAAATGGGAATAT+AGG | + | chr8.3:25704327-25704346 | MS.gene071690:intron | 25.0% |
| !! | TAGGTTTCTGAAAACAATTA+AGG | - | chr8.3:25703891-25703910 | None:intergenic | 25.0% |
| !! | TGTCTAATATGTTTTATGAG+TGG | + | chr8.3:25704545-25704564 | MS.gene071690:intron | 25.0% |
| !! | TTAAATTTCAGGTATCAAAC+TGG | + | chr8.3:25705036-25705055 | MS.gene071690:intron | 25.0% |
| !!! | AAATTGTGCCATTATTTTAG+AGG | + | chr8.3:25704185-25704204 | MS.gene071690:intron | 25.0% |
| !!! | CCAAAAGCAAAAGTATTATT+AGG | - | chr8.3:25704835-25704854 | None:intergenic | 25.0% |
| !!! | GTTTTCTGCTTTAAGAAAAA+AGG | - | chr8.3:25704076-25704095 | None:intergenic | 25.0% |
| !!! | GTTTTTGAGCAAGTTTTTTA+GGG | - | chr8.3:25704487-25704506 | None:intergenic | 25.0% |
| !!! | TACCTAAAATTTTAGCTGTT+TGG | + | chr8.3:25703147-25703166 | MS.gene071690:intron | 25.0% |
| AAGAAAATGTTCAAAAAGCC+AGG | - | chr8.3:25700407-25700426 | None:intergenic | 30.0% | |
| AAGGTGAATGTGTGTTTATA+CGG | + | chr8.3:25702385-25702404 | MS.gene071690:intron | 30.0% | |
| AATGTGTGTTTATACGGTTA+AGG | + | chr8.3:25702391-25702410 | MS.gene071690:intron | 30.0% | |
| ACCCTTTACATTTAGAGATT+TGG | + | chr8.3:25701050-25701069 | MS.gene071690:intron | 30.0% | |
| ACCTATAATAGTCAGTGATA+CGG | + | chr8.3:25703645-25703664 | MS.gene071690:intron | 30.0% | |
| ACGTGTGTGATTTAAATTTC+AGG | + | chr8.3:25705025-25705044 | MS.gene071690:intron | 30.0% | |
| ACTTTCTCTCTCATATCAAT+TGG | + | chr8.3:25703194-25703213 | MS.gene071690:intron | 30.0% | |
| AGCACTCAAATTTCTAAGTA+CGG | - | chr8.3:25700941-25700960 | None:intergenic | 30.0% | |
| ATGTGAAAGTGAACTCTTAA+AGG | - | chr8.3:25703400-25703419 | None:intergenic | 30.0% | |
| ATGTGTGTTTATACGGTTAA+GGG | + | chr8.3:25702392-25702411 | MS.gene071690:intron | 30.0% | |
| CAACACATTGTAGAATCTAT+AGG | + | chr8.3:25703676-25703695 | MS.gene071690:intron | 30.0% | |
| CATCCTTTAAACAACGAAAA+TGG | - | chr8.3:25700171-25700190 | None:intergenic | 30.0% | |
| GACTTTGATCATTTACAACA+AGG | + | chr8.3:25700762-25700781 | MS.gene071690:intron | 30.0% | |
| GATCCAAATCTCTAAATGTA+AGG | - | chr8.3:25701056-25701075 | None:intergenic | 30.0% | |
| GCACTCAAATTTCTAAGTAA+CGG | - | chr8.3:25701087-25701106 | None:intergenic | 30.0% | |
| TACACTTAGAAATTTCGATC+AGG | + | chr8.3:25701498-25701517 | MS.gene071690:intron | 30.0% | |
| TCCAAATCTCTAAATGTAAG+GGG | - | chr8.3:25701201-25701220 | None:intergenic | 30.0% | |
| TGTGAAAGTGAACTCTTAAA+GGG | - | chr8.3:25703399-25703418 | None:intergenic | 30.0% | |
| TGTTCAAGAAGTTTAAGTCT+TGG | - | chr8.3:25700280-25700299 | None:intergenic | 30.0% | |
| TTAGGATATGATATGACAGT+TGG | - | chr8.3:25704213-25704232 | None:intergenic | 30.0% | |
| TTGTAGAATCTATAGGATCA+AGG | + | chr8.3:25703683-25703702 | MS.gene071690:intron | 30.0% | |
| TTGTTGAAAATTAAATCGGG+AGG | + | chr8.3:25704126-25704145 | MS.gene071690:intron | 30.0% | |
| TTTGTTAACATGACAACACA+TGG | + | chr8.3:25702961-25702980 | MS.gene071690:intron | 30.0% | |
| ! | AAACTGGTTCATTAATGCTA+GGG | + | chr8.3:25705052-25705071 | MS.gene071690:CDS | 30.0% |
| ! | ATTTAAAACCCTAGAGTAAG+GGG | + | chr8.3:25700685-25700704 | MS.gene071690:intron | 30.0% |
| ! | CAATTTAAAACCCTAGAGTA+AGG | + | chr8.3:25700683-25700702 | MS.gene071690:intron | 30.0% |
| ! | GCTTTTAGATTCTCTCTTTA+GGG | - | chr8.3:25702089-25702108 | None:intergenic | 30.0% |
| ! | GTTCATCAATCAATTTTCAG+AGG | + | chr8.3:25704640-25704659 | MS.gene071690:intron | 30.0% |
| ! | TTAGGGAGCTCTTATATTTT+TGG | - | chr8.3:25704470-25704489 | None:intergenic | 30.0% |
| !! | AGGAGTGTTATATTATGTCA+CGG | - | chr8.3:25701905-25701924 | None:intergenic | 30.0% |
| !! | CAAGTATTTAGCTCTATGTT+TGG | - | chr8.3:25704515-25704534 | None:intergenic | 30.0% |
| !! | GGTTTTGTGTTTTGTATGAA+AGG | - | chr8.3:25702787-25702806 | None:intergenic | 30.0% |
| !! | GGTTTTTGAGCAAGTTTTTT+AGG | - | chr8.3:25704488-25704507 | None:intergenic | 30.0% |
| !! | TACAAGTATTGATCTCATCA+AGG | - | chr8.3:25701985-25702004 | None:intergenic | 30.0% |
| !!! | GATTCATTGTTTTTTGAGCT+GGG | - | chr8.3:25704445-25704464 | None:intergenic | 30.0% |
| !!! | TATGTTTTGGAGCTTAATCA+TGG | + | chr8.3:25703809-25703828 | MS.gene071690:intron | 30.0% |
| !!! | TGATTCATTGTTTTTTGAGC+TGG | - | chr8.3:25704446-25704465 | None:intergenic | 30.0% |
| !!! | TTTTGGGTTTTGTTTTCTCT+TGG | + | chr8.3:25702734-25702753 | MS.gene071690:intron | 30.0% |
| AAAATGTTGACAGATCGTTC+AGG | - | chr8.3:25700379-25700398 | None:intergenic | 35.0% | |
| AAATTTCTAAGTACGGTGGT+AGG | - | chr8.3:25700934-25700953 | None:intergenic | 35.0% | |
| AATCTCTAATGTAATCGGTG+CGG | - | chr8.3:25700904-25700923 | None:intergenic | 35.0% | |
| AATTTAGACCCCTTACTCTA+GGG | - | chr8.3:25700696-25700715 | None:intergenic | 35.0% | |
| ACCATGATGTTGTAGTTGTA+GGG | - | chr8.3:25701714-25701733 | None:intergenic | 35.0% | |
| ACCCCTTACATTTAGAGATT+TGG | + | chr8.3:25701197-25701216 | MS.gene071690:intron | 35.0% | |
| ACTCAAATTTCTAAGTACGG+TGG | - | chr8.3:25700938-25700957 | None:intergenic | 35.0% | |
| AGCAACAATAACAACACAAG+TGG | + | chr8.3:25705179-25705198 | MS.gene071690:CDS | 35.0% | |
| AGGTGTAGGCATATACATAA+GGG | - | chr8.3:25703629-25703648 | None:intergenic | 35.0% | |
| AGTGAGTTATTAACATCCCA+GGG | - | chr8.3:25702160-25702179 | None:intergenic | 35.0% | |
| CAAGAACTTAAAGAAGCAGA+AGG | + | chr8.3:25705113-25705132 | MS.gene071690:CDS | 35.0% | |
| CACAATAGGGACCATAAATA+AGG | + | chr8.3:25703236-25703255 | MS.gene071690:intron | 35.0% | |
| CACGATGAGACAATAATATC+TGG | - | chr8.3:25703279-25703298 | None:intergenic | 35.0% | |
| CAGATATTATTGTCTCATCG+TGG | + | chr8.3:25703277-25703296 | MS.gene071690:intron | 35.0% | |
| CATTAAATTTCAGACACCCT+GGG | + | chr8.3:25702141-25702160 | MS.gene071690:intron | 35.0% | |
| CCTATAATAGTCAGTGATAC+GGG | + | chr8.3:25703646-25703665 | MS.gene071690:intron | 35.0% | |
| CTATAATAGTCAGTGATACG+GGG | + | chr8.3:25703647-25703666 | MS.gene071690:intron | 35.0% | |
| CTCAAATTTCTAAGTAACGG+TGG | - | chr8.3:25701084-25701103 | None:intergenic | 35.0% | |
| GAGTTATTAGGAGAGAAAGA+TGG | + | chr8.3:25700220-25700239 | MS.gene071690:CDS | 35.0% | |
| GAGTTTAGTTGAATACTAGC+GGG | - | chr8.3:25703110-25703129 | None:intergenic | 35.0% | |
| GATCCAAACAATGAATGCTA+GGG | + | chr8.3:25701749-25701768 | MS.gene071690:intron | 35.0% | |
| GCATTGTACTAAGTGTATAC+AGG | - | chr8.3:25704933-25704952 | None:intergenic | 35.0% | |
| GGAGTTTAGTTGAATACTAG+CGG | - | chr8.3:25703111-25703130 | None:intergenic | 35.0% | |
| GGATGCTTTACAACTACATA+TGG | + | chr8.3:25701615-25701634 | MS.gene071690:intron | 35.0% | |
| GTCAGAGAAATGATCGTATA+TGG | + | chr8.3:25703511-25703530 | MS.gene071690:intron | 35.0% | |
| TAGGTGTAGGCATATACATA+AGG | - | chr8.3:25703630-25703649 | None:intergenic | 35.0% | |
| TAGTGAGTTATTAACATCCC+AGG | - | chr8.3:25702161-25702180 | None:intergenic | 35.0% | |
| TCATTAAATTTCAGACACCC+TGG | + | chr8.3:25702140-25702159 | MS.gene071690:intron | 35.0% | |
| TGACTTATCGTTTATAACGG+TGG | + | chr8.3:25704904-25704923 | MS.gene071690:intron | 35.0% | |
| TGATCCAAACAATGAATGCT+AGG | + | chr8.3:25701748-25701767 | MS.gene071690:intron | 35.0% | |
| TGCATAGCAAAGTTAATGTG+AGG | + | chr8.3:25704950-25704969 | MS.gene071690:intron | 35.0% | |
| TGGTACATATCTTCTACCAT+GGG | - | chr8.3:25705092-25705111 | None:intergenic | 35.0% | |
| TTACCCTAGCATTCATTGTT+TGG | - | chr8.3:25701755-25701774 | None:intergenic | 35.0% | |
| TTGCAAAGATTGTGAATGTG+AGG | + | chr8.3:25701864-25701883 | MS.gene071690:intron | 35.0% | |
| TTGGTACATATCTTCTACCA+TGG | - | chr8.3:25705093-25705112 | None:intergenic | 35.0% | |
| TTGTAGTTGTAGGGACAATT+AGG | - | chr8.3:25701705-25701724 | None:intergenic | 35.0% | |
| ! | CAAACTGGTTCATTAATGCT+AGG | + | chr8.3:25705051-25705070 | MS.gene071690:CDS | 35.0% |
| ! | CACCGATTACATTAGAGATT+TGG | + | chr8.3:25700904-25700923 | MS.gene071690:intron | 35.0% |
| ! | CAGCTACTATAGAAGTTTTG+AGG | + | chr8.3:25701588-25701607 | MS.gene071690:intron | 35.0% |
| ! | CTGCTTCTTTAAGTTCTTGT+TGG | - | chr8.3:25705112-25705131 | None:intergenic | 35.0% |
| ! | GGCTTTTAGATTCTCTCTTT+AGG | - | chr8.3:25702090-25702109 | None:intergenic | 35.0% |
| ! | TAGAGAGGCATAAACATGAA+AGG | - | chr8.3:25703309-25703328 | None:intergenic | 35.0% |
| ! | TCACTGACTATTATAGGTGT+AGG | - | chr8.3:25703643-25703662 | None:intergenic | 35.0% |
| ! | TTTAGATTCTCTCTTTAGGG+TGG | - | chr8.3:25702086-25702105 | None:intergenic | 35.0% |
| !! | ACGCCATTTTCGTTGTTTAA+AGG | + | chr8.3:25700165-25700184 | MS.gene071690:CDS | 35.0% |
| !! | AGTTGGCACCTCTAAAATAA+TGG | - | chr8.3:25704196-25704215 | None:intergenic | 35.0% |
| !! | TTAGATTCTCTCTTTAGGGT+GGG | - | chr8.3:25702085-25702104 | None:intergenic | 35.0% |
| !! | TTTAGCTCTATGTTTGGAAG+TGG | - | chr8.3:25704509-25704528 | None:intergenic | 35.0% |
| !!! | ATGAGTGTGATGTCATTTTC+TGG | + | chr8.3:25702417-25702436 | MS.gene071690:intron | 35.0% |
| !!! | CTATAGAAGTTTTGAGGACT+TGG | + | chr8.3:25701594-25701613 | MS.gene071690:intron | 35.0% |
| AAGGGGTCTAAATTCTTTGC+AGG | + | chr8.3:25700702-25700721 | MS.gene071690:intron | 40.0% | |
| AGAGTGAGAGAAAGAACGTA+CGG | - | chr8.3:25700433-25700452 | None:intergenic | 40.0% | |
| AGATGCTTATCTGCATCACT+CGG | - | chr8.3:25702460-25702479 | None:intergenic | 40.0% | |
| ATGGTCCCTATTGTGTAGTT+GGG | - | chr8.3:25703231-25703250 | None:intergenic | 40.0% | |
| ATTAGGAGAGAAAGATGGTG+TGG | + | chr8.3:25700225-25700244 | MS.gene071690:CDS | 40.0% | |
| ATTTCTAAGTGTAAAGGGCG+TGG | - | chr8.3:25701491-25701510 | None:intergenic | 40.0% | |
| CACCATGATGTTGTAGTTGT+AGG | - | chr8.3:25701715-25701734 | None:intergenic | 40.0% | |
| CATTAATTGGGTGACTAGAG+AGG | - | chr8.3:25703324-25703343 | None:intergenic | 40.0% | |
| GAATTTAGACCCCTTACTCT+AGG | - | chr8.3:25700697-25700716 | None:intergenic | 40.0% | |
| GATGTCAATTGGATAGCTCA+AGG | + | chr8.3:25704151-25704170 | MS.gene071690:intron | 40.0% | |
| GGTGTAGGCATATACATAAG+GGG | - | chr8.3:25703628-25703647 | None:intergenic | 40.0% | |
| TATCATAGATTGTCACGCCA+AGG | + | chr8.3:25702302-25702321 | MS.gene071690:intron | 40.0% | |
| TATGGTCCCTATTGTGTAGT+TGG | - | chr8.3:25703232-25703251 | None:intergenic | 40.0% | |
| TCCCTACAACTACAACATCA+TGG | + | chr8.3:25701710-25701729 | MS.gene071690:intron | 40.0% | |
| TTAATGCTAGGGTTCGTTTG+TGG | + | chr8.3:25705063-25705082 | MS.gene071690:CDS | 40.0% | |
| TTAGGAGAGAAAGATGGTGT+GGG | + | chr8.3:25700226-25700245 | MS.gene071690:CDS | 40.0% | |
| TTCTGCAGAGTTGTTGGATA+TGG | - | chr8.3:25700833-25700852 | None:intergenic | 40.0% | |
| TTTCTTTCTGTCTGTCTCCT+TGG | - | chr8.3:25702322-25702341 | None:intergenic | 40.0% | |
| ! | CCCGTATCACTGACTATTAT+AGG | - | chr8.3:25703649-25703668 | None:intergenic | 40.0% |
| ! | CTAAATGTAAAGGGTGCGAT+TGG | - | chr8.3:25701045-25701064 | None:intergenic | 40.0% |
| ! | CTAGGGTAAGATAACTTGCA+TGG | + | chr8.3:25701766-25701785 | MS.gene071690:intron | 40.0% |
| !! | AGAGAGAAAGTGTTTGCTAG+AGG | - | chr8.3:25703185-25703204 | None:intergenic | 40.0% |
| !! | ATTTTCTGGTCTCTTTCCTC+AGG | + | chr8.3:25702431-25702450 | MS.gene071690:intron | 40.0% |
| !! | CTAAATGTAAGGGGTGTTGT+TGG | - | chr8.3:25701192-25701211 | None:intergenic | 40.0% |
| !! | GAGAGAAAGTGTTTGCTAGA+GGG | - | chr8.3:25703184-25703203 | None:intergenic | 40.0% |
| !! | TAGATTCTCTCTTTAGGGTG+GGG | - | chr8.3:25702084-25702103 | None:intergenic | 40.0% |
| !! | TGTAGCAATTCTAGAGCTGA+TGG | + | chr8.3:25700736-25700755 | MS.gene071690:intron | 40.0% |
| !! | TGTTGTTTCTGCAGAGTTGT+TGG | - | chr8.3:25700839-25700858 | None:intergenic | 40.0% |
| !! | TTTTGAGCTGGGTTTTGTGT+TGG | - | chr8.3:25704434-25704453 | None:intergenic | 40.0% |
| ACAGCTTCACAGTGCAACAA+TGG | - | chr8.3:25701526-25701545 | None:intergenic | 45.0% | |
| ATAGTCAGTGATACGGGGAA+AGG | + | chr8.3:25703652-25703671 | MS.gene071690:intron | 45.0% | |
| ATCTCTGTGAGAACGTAGCA+AGG | + | chr8.3:25700550-25700569 | MS.gene071690:intron | 45.0% | |
| CAGCTCTGCAACAACTACAA+TGG | + | chr8.3:25701132-25701151 | MS.gene071690:intron | 45.0% | |
| CATCTCTTAGCAAGACAGAC+TGG | + | chr8.3:25702475-25702494 | MS.gene071690:CDS | 45.0% | |
| GAAAAAGGAGTTGCAGAGAG+TGG | + | chr8.3:25702052-25702071 | MS.gene071690:intron | 45.0% | |
| GAAGCAGAAGGATCATCAGA+AGG | + | chr8.3:25705125-25705144 | MS.gene071690:CDS | 45.0% | |
| GATGCTTATCTGCATCACTC+GGG | - | chr8.3:25702459-25702478 | None:intergenic | 45.0% | |
| GCACTTGTTTCACACTCTTG+AGG | - | chr8.3:25704744-25704763 | None:intergenic | 45.0% | |
| GGATTGTGGAAAGCTAAGAG+TGG | - | chr8.3:25702528-25702547 | None:intergenic | 45.0% | |
| GTTTCATCAGATGGGGATGA+TGG | + | chr8.3:25700321-25700340 | MS.gene071690:CDS | 45.0% | |
| TAGGAGAGAAAGATGGTGTG+GGG | + | chr8.3:25700227-25700246 | MS.gene071690:CDS | 45.0% | |
| TCTAATGTAATCGGTGCGGT+TGG | - | chr8.3:25700900-25700919 | None:intergenic | 45.0% | |
| TGGTCCCTATTGTGTAGTTG+GGG | - | chr8.3:25703230-25703249 | None:intergenic | 45.0% | |
| TGTAGTTGTTGCAGAGCTGT+TGG | - | chr8.3:25701131-25701150 | None:intergenic | 45.0% | |
| TGTGGAAAGCTAAGAGTGGA+GGG | - | chr8.3:25702524-25702543 | None:intergenic | 45.0% | |
| TTCCCCCCAACTACACAATA+GGG | + | chr8.3:25703223-25703242 | MS.gene071690:intron | 45.0% | |
| TTGTGGAAAGCTAAGAGTGG+AGG | - | chr8.3:25702525-25702544 | None:intergenic | 45.0% | |
| ! | CTAAATGTAAGGGGTGCAGT+TGG | - | chr8.3:25701339-25701358 | None:intergenic | 45.0% |
| ! | GACGAACCTGATTTCTGGAA+AGG | - | chr8.3:25702501-25702520 | None:intergenic | 45.0% |
| !! | AAGTCTTGGTGTCTCTCCTT+TGG | - | chr8.3:25700266-25700285 | None:intergenic | 45.0% |
| !! | AGAGAGCGTTTCATCAGATG+GGG | + | chr8.3:25700314-25700333 | MS.gene071690:CDS | 45.0% |
| !! | CAGAGAGCGTTTCATCAGAT+GGG | + | chr8.3:25700313-25700332 | MS.gene071690:CDS | 45.0% |
| !! | CTGTCAACATTTTGAGAGCC+TGG | + | chr8.3:25700386-25700405 | MS.gene071690:CDS | 45.0% |
| !! | AATAAATAAAAAGTTAAAAA+TGG | - | chr8.3:25702855-25702874 | None:intergenic | 5.0% |
| !! | ATAATTAAATCTAAAAAATA+AGG | - | chr8.3:25704286-25704305 | None:intergenic | 5.0% |
| !!! | TTTTAACTTTTTATTTATTT+TGG | + | chr8.3:25702856-25702875 | MS.gene071690:intron | 5.0% |
| ATCGGGAGGTCGATGTCAAT+TGG | + | chr8.3:25704140-25704159 | MS.gene071690:intron | 50.0% | |
| CTCTCCTTTGGTCAAACCTG+AGG | - | chr8.3:25700254-25700273 | None:intergenic | 50.0% | |
| CTTCCCCCCAACTACACAAT+AGG | + | chr8.3:25703222-25703241 | MS.gene071690:intron | 50.0% | |
| GCAGAGTCGTTGGATATGAG+TGG | - | chr8.3:25701415-25701434 | None:intergenic | 50.0% | |
| GGTCCCTATTGTGTAGTTGG+GGG | - | chr8.3:25703229-25703248 | None:intergenic | 50.0% | |
| GGTTCGTTTGTGGAAACCCA+TGG | + | chr8.3:25705073-25705092 | MS.gene071690:CDS | 50.0% | |
| GTCCCTATTGTGTAGTTGGG+GGG | - | chr8.3:25703228-25703247 | None:intergenic | 50.0% | |
| GTGGAAAGCTAAGAGTGGAG+GGG | - | chr8.3:25702523-25702542 | None:intergenic | 50.0% | |
| TGGAGCAGCAGTTCCATACA+CGG | + | chr8.3:25700120-25700139 | MS.gene071690:CDS | 50.0% | |
| TGTAGTTGCTGCAGAGTCGT+TGG | - | chr8.3:25701425-25701444 | None:intergenic | 50.0% | |
| TGTTGTTGCTGCAGAGCTGT+TGG | - | chr8.3:25700984-25701003 | None:intergenic | 50.0% | |
| TTCTGAGCTAGTGCCGTGTA+TGG | - | chr8.3:25700136-25700155 | None:intergenic | 50.0% | |
| ! | CTAAGTGTAAAGGGCGTGGT+TGG | - | chr8.3:25701487-25701506 | None:intergenic | 50.0% |
| !! | GACTGGCCTTTCCAGAAATC+AGG | + | chr8.3:25702492-25702511 | MS.gene071690:CDS | 50.0% |
| !! | GCAGAGAGCGTTTCATCAGA+TGG | + | chr8.3:25700312-25700331 | MS.gene071690:CDS | 50.0% |
| !! | GGATGATGGAACAGGAAGCT+TGG | + | chr8.3:25700335-25700354 | MS.gene071690:CDS | 50.0% |
| !! | TCAGATGGGGATGATGGAAC+AGG | + | chr8.3:25700327-25700346 | MS.gene071690:CDS | 50.0% |
| AAAGATGGTGTGGGGACCTC+AGG | + | chr8.3:25700235-25700254 | MS.gene071690:CDS | 55.0% | |
| CGTTCAGGCAAACCTCTCTG+TGG | - | chr8.3:25700364-25700383 | None:intergenic | 55.0% | |
| GAAGCTTGGAGACCACAGAG+AGG | + | chr8.3:25700349-25700368 | MS.gene071690:CDS | 55.0% | |
| GAGGGGACGAACCTGATTTC+TGG | - | chr8.3:25702506-25702525 | None:intergenic | 55.0% | |
| GGGACCTCAGGTTTGACCAA+AGG | + | chr8.3:25700247-25700266 | MS.gene071690:CDS | 55.0% | |
| CTGCATCACTCGGGTACCTG+AGG | - | chr8.3:25702450-25702469 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 25700112 | 25705235 | 25700112 | ID=MS.gene071690 |
| chr8.3 | mRNA | 25700112 | 25705235 | 25700112 | ID=MS.gene071690.t1;Parent=MS.gene071690 |
| chr8.3 | exon | 25700112 | 25700431 | 25700112 | ID=MS.gene071690.t1.exon1;Parent=MS.gene071690.t1 |
| chr8.3 | CDS | 25700112 | 25700431 | 25700112 | ID=cds.MS.gene071690.t1;Parent=MS.gene071690.t1 |
| chr8.3 | exon | 25702453 | 25702513 | 25702453 | ID=MS.gene071690.t1.exon2;Parent=MS.gene071690.t1 |
| chr8.3 | CDS | 25702453 | 25702513 | 25702453 | ID=cds.MS.gene071690.t1;Parent=MS.gene071690.t1 |
| chr8.3 | exon | 25705047 | 25705235 | 25705047 | ID=MS.gene071690.t1.exon3;Parent=MS.gene071690.t1 |
| chr8.3 | CDS | 25705047 | 25705235 | 25705047 | ID=cds.MS.gene071690.t1;Parent=MS.gene071690.t1 |
| Gene Sequence |
| Protein sequence |
