AlfalfaGEDB | MS.gene073043

M. sativa cultivar XinJiangDaYe / MS.gene073043

KEGG: K03036
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF01399.30 PF18055.4 PF18503.4

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073043.t1	XP_024635331.1	99.3	422	3	0	1	422	1	422	4.10E-225	790.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073043.t1	Q9LP45	86.7	415	54	1	8	422	6	419	6.8e-197	688.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073043.t1	G7J2W0	99.3	422	3	0	1	422	250	671	2.9e-225	790.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene062770	MS.gene073043	PPI
MS.gene073043	MS.gene057144	PPI
MS.gene025808	MS.gene073043	PPI
MS.gene073043	MS.gene064786	PPI
MS.gene40486	MS.gene073043	PPI
MS.gene073043	MS.gene52815	PPI
MS.gene59485	MS.gene073043	PPI
MS.gene011376	MS.gene073043	PPI
MS.gene014393	MS.gene073043	PPI
MS.gene044013	MS.gene073043	PPI
MS.gene44230	MS.gene073043	PPI
MS.gene073043	MS.gene69373	PPI
MS.gene073043	MS.gene024828	PPI
MS.gene058061	MS.gene073043	PPI
MS.gene67460	MS.gene073043	PPI
MS.gene073043	MS.gene21169	PPI
MS.gene67099	MS.gene073043	PPI
MS.gene073043	MS.gene24375	PPI
MS.gene012127	MS.gene073043	PPI
MS.gene09974	MS.gene073043	PPI
MS.gene004328	MS.gene073043	PPI
MS.gene073043	MS.gene21801	PPI
MS.gene073043	MS.gene64789	PPI
MS.gene48400	MS.gene073043	PPI
MS.gene073043	MS.gene057145	PPI
MS.gene002648	MS.gene073043	PPI
MS.gene017622	MS.gene073043	PPI
MS.gene89672	MS.gene073043	PPI
MS.gene68079	MS.gene073043	PPI
MS.gene031682	MS.gene073043	PPI
MS.gene006626	MS.gene073043	PPI
MS.gene045570	MS.gene073043	PPI
MS.gene48279	MS.gene073043	PPI
MS.gene48281	MS.gene073043	PPI
MS.gene073043	MS.gene033335	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073043.t1	MTR_3g109300	99.289	422	3	0	1	422	250	671	0.0	847
MS.gene073043.t1	MTR_1g009010	93.079	419	29	0	3	421	2	420	0.0	768
MS.gene073043.t1	MTR_7g087530	24.403	377	265	8	14	379	33	400	4.69e-22	98.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073043.t1	AT1G29150	86.747	415	54	1	8	422	6	419	0.0	706
MS.gene073043.t1	AT1G29150	86.747	415	54	1	8	422	6	419	0.0	706
MS.gene073043.t1	AT2G26990	21.892	370	269	8	21	379	40	400	1.47e-16	81.6

Find 96 sgRNAs with CRISPR-Local

Find 111 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAGCTTTGACTCTTCTTTC+TGG	0.076579	3.3:+89392525	MS.gene073043:CDS
GAAGATGTCTCAGATGATTT+TGG	0.221126	3.3:+89393178	MS.gene073043:CDS
TACACAACAACATATATTTC+AGG	0.264578	3.3:-89392839	None:intergenic
CTTAGGAATCAAGGAGAAAA+AGG	0.267105	3.3:-89392316	None:intergenic
AAGCTTTGACTCTTCTTTCT+GGG	0.325672	3.3:+89392526	MS.gene073043:CDS
GTCCCTGTATGATACCCTTC+TGG	0.327271	3.3:+89393061	MS.gene073043:CDS
CAAGAAGTTTGCTGGGACAT+TGG	0.347751	3.3:+89393202	MS.gene073043:CDS
GGGTGGAATTATTTCTTCTA+AGG	0.348906	3.3:+89392890	MS.gene073043:CDS
ACCTTCTCAGGCAAGAGAAC+AGG	0.350066	3.3:+89392256	MS.gene073043:CDS
TCTTTCATACGCAGAGCTTC+TGG	0.357829	3.3:-89392210	None:intergenic
GAAATGGTCTCTAAAGTTGC+AGG	0.361989	3.3:-89393281	None:intergenic
TGGTTGACAGTCTTTATGTT+AGG	0.381996	3.3:+89393318	MS.gene073043:CDS
CACTTTCCCAACATTGGAAA+TGG	0.391471	3.3:-89393297	None:intergenic
TATTCCACTCTGAAGATCTA+TGG	0.400897	3.3:-89392718	None:intergenic
CTGGGTTGGTCAAAGAGGTT+AGG	0.401504	3.3:+89392544	MS.gene073043:CDS
TTCCGCTCAACGTGAACAAT+TGG	0.403038	3.3:-89393158	None:intergenic
TAGAGACCATTTCCAATGTT+GGG	0.407846	3.3:+89393291	MS.gene073043:CDS
GAAATGTGTCTGTGAACAAT+TGG	0.411462	3.3:-89393038	None:intergenic
TTTGACTCTTCTTTCTGGGT+TGG	0.413470	3.3:+89392530	MS.gene073043:CDS
CAGGACTACAAGGCACAGTT+GGG	0.423474	3.3:+89393008	MS.gene073043:CDS
TTCTGGAGCAGAATCTTTGT+AGG	0.427259	3.3:+89393078	MS.gene073043:CDS
GGGTATATTGCATCAGTCTT+GGG	0.434505	3.3:-89393260	None:intergenic
CATTTCCAATGTTGGGAAAG+TGG	0.438184	3.3:+89393298	MS.gene073043:CDS
CCCTGTTCTCTTGCCTGAGA+AGG	0.446003	3.3:-89392257	None:intergenic
GAGAGCTCATGCCATGATCT+TGG	0.450538	3.3:-89393345	None:intergenic
CAAATCTTACTGACCTTCTC+AGG	0.450662	3.3:+89392244	MS.gene073043:CDS
AGGGTATATTGCATCAGTCT+TGG	0.452702	3.3:-89393261	None:intergenic
TTCAGGCTGAAAATAGCCTT+AGG	0.454754	3.3:-89392822	None:intergenic
GGAATTATTTCTTCTAAGGC+AGG	0.456178	3.3:+89392894	MS.gene073043:CDS
TCTATGGCCCCTTGTTGAGC+AGG	0.465189	3.3:-89392702	None:intergenic
GATTTCACTGTGTAAAGAAA+TGG	0.466235	3.3:+89392410	MS.gene073043:CDS
TGTTAGGTCTGCCAAGATCA+TGG	0.470208	3.3:+89393334	MS.gene073043:CDS
GGATTCAATTGCTCAGGCAT+TGG	0.471759	3.3:+89392122	MS.gene073043:CDS
ATCAAGTACACGATAAAGAA+TGG	0.473844	3.3:-89392172	None:intergenic
GCTCCAGAAGGGTATCATAC+AGG	0.474854	3.3:-89393064	None:intergenic
AAGGCAGGATTGCAATATGT+TGG	0.477736	3.3:+89392909	MS.gene073043:CDS
GCTTTCATCGCATCCAAGTC+AGG	0.487211	3.3:-89392933	None:intergenic
TTAGAGACCATTTCCAATGT+TGG	0.488579	3.3:+89393290	MS.gene073043:CDS
GTCAACCACTTTCCCAACAT+TGG	0.489301	3.3:-89393303	None:intergenic
GCAGGACTACAAGGCACAGT+TGG	0.489808	3.3:+89393007	MS.gene073043:CDS
TTCAATTGCTCAGGCATTGG+AGG	0.497862	3.3:+89392125	MS.gene073043:CDS
AGGCAGGATTGCAATATGTT+GGG	0.501095	3.3:+89392910	MS.gene073043:CDS
AACTGCTTTGCAGGACTACA+AGG	0.501162	3.3:+89392998	MS.gene073043:CDS
CAATGCTCTTGAAGACCCTA+AGG	0.511010	3.3:+89392806	MS.gene073043:CDS
GCAATATGTTGGGCCTGACT+TGG	0.511624	3.3:+89392920	MS.gene073043:CDS
CCTTCTCAGGCAAGAGAACA+GGG	0.514248	3.3:+89392257	MS.gene073043:CDS
TCAGGCTGAAAATAGCCTTA+GGG	0.519784	3.3:-89392821	None:intergenic
GCAATCTCAACTCTTGAGAA+TGG	0.520686	3.3:-89393110	None:intergenic
GCAATTGAATCCGTTGTGGC+AGG	0.520844	3.3:-89392111	None:intergenic
ATCGAATATAACGAGGCATC+CGG	0.522107	3.3:-89393234	None:intergenic
GACTCAGTTGCTAAAATACC+AGG	0.527380	3.3:+89392372	MS.gene073043:CDS
CACAACGGATTCAATTGCTC+AGG	0.533092	3.3:+89392116	MS.gene073043:CDS
AAGAGCATTGAAAGACTCAA+AGG	0.538169	3.3:-89392793	None:intergenic
AGCTCTGCGTATGAAAGAGC+AGG	0.542904	3.3:+89392215	MS.gene073043:CDS
CAGCTGTTCTAGCAGCCGTG+AGG	0.548019	3.3:-89392659	None:intergenic
AGAGCTTCTGGTGAAGAAGA+TGG	0.548989	3.3:-89392198	None:intergenic
TATGTTGTTGTGTAAGATCA+TGG	0.550906	3.3:+89392848	MS.gene073043:CDS
AATACTTCATGCTGAGGAGA+AGG	0.551692	3.3:+89392737	MS.gene073043:CDS
TTCCAATTGTTCACGTTGAG+CGG	0.552851	3.3:+89393156	MS.gene073043:CDS
TCTTTCTGGGTTGGTCAAAG+AGG	0.554089	3.3:+89392539	MS.gene073043:CDS
AGCTGTTCTAGCAGCCGTGA+GGG	0.554968	3.3:-89392658	None:intergenic
TTTGCTGGGACATTGGATCA+AGG	0.555668	3.3:+89393209	MS.gene073043:CDS
TATGTGCCTCCTGCTCAACA+AGG	0.559971	3.3:+89392693	MS.gene073043:CDS
CTCCAGAAGGGTATCATACA+GGG	0.564510	3.3:-89393063	None:intergenic
ATCTGTAGATCAGATGTCCC+TGG	0.569702	3.3:-89392390	None:intergenic
AAATGTGTCTGTGAACAATT+GGG	0.569773	3.3:-89393037	None:intergenic
TACAAAGATTCTGCTCCAGA+AGG	0.569886	3.3:-89393076	None:intergenic
AGAATGGATATCGCATCAGA+AGG	0.570735	3.3:-89392156	None:intergenic
GAATGGATATCGCATCAGAA+GGG	0.585707	3.3:-89392155	None:intergenic
GGGACATTGGATCAAGGTGC+CGG	0.586404	3.3:+89393215	MS.gene073043:CDS
GCAGCCTTCTCACTTCATTG+AGG	0.586407	3.3:+89392292	MS.gene073043:CDS
CTCATTAAGAAACCTTCCAA+AGG	0.587775	3.3:+89392626	MS.gene073043:CDS
CAGGCAAGAGAACAGGGGAG+AGG	0.594061	3.3:+89392263	MS.gene073043:CDS
ATCTTATCTTCCTGCCACAA+CGG	0.596364	3.3:+89392101	MS.gene073043:CDS
AAAGGCAAAAGCTGCCCTCA+CGG	0.605293	3.3:+89392644	MS.gene073043:CDS
AAGGTCAGTAAGATTTGTGA+TGG	0.606087	3.3:-89392238	None:intergenic
AGGGCCTCAATGAAGTGAGA+AGG	0.611750	3.3:-89392296	None:intergenic
ATGTGCCTCCTGCTCAACAA+GGG	0.612734	3.3:+89392694	MS.gene073043:CDS
ATGGCCCCTTGTTGAGCAGG+AGG	0.618931	3.3:-89392699	None:intergenic
ACAAAGATTCTGCTCCAGAA+GGG	0.620348	3.3:-89393075	None:intergenic
AAAACTGCAAAGATTGTAAG+GGG	0.631797	3.3:+89392342	MS.gene073043:CDS
GAGTGGAATACTTCATGCTG+AGG	0.636952	3.3:+89392731	MS.gene073043:CDS
AAATGGTCTCTAAAGTTGCA+GGG	0.639902	3.3:-89393280	None:intergenic
TGTGCCTCCTGCTCAACAAG+GGG	0.645095	3.3:+89392695	MS.gene073043:CDS
AGGAAGATAAGATGTAGACA+TGG	0.676910	3.3:-89392091	None:intergenic
AGGACTACAAGGCACAGTTG+GGG	0.686447	3.3:+89393009	MS.gene073043:CDS
GGACTACAAGGCACAGTTGG+GGG	0.689123	3.3:+89393010	MS.gene073043:CDS
CTGAGCAATTGAATCCGTTG+TGG	0.699339	3.3:-89392115	None:intergenic
TGTGTAAAGAAATGGTGCAG+TGG	0.703348	3.3:+89392418	MS.gene073043:CDS
AATCAAGCTGATGACGTGGG+TGG	0.707192	3.3:+89392873	MS.gene073043:CDS
CTTCTCAGGCAAGAGAACAG+GGG	0.711755	3.3:+89392258	MS.gene073043:CDS
ACTCAGTTGCTAAAATACCA+GGG	0.713806	3.3:+89392373	MS.gene073043:CDS
GGTGAATCAAGCTGATGACG+TGG	0.718460	3.3:+89392869	MS.gene073043:CDS
GGGGCCATAGATCTTCAGAG+TGG	0.726182	3.3:+89392714	MS.gene073043:CDS
GTGAATCAAGCTGATGACGT+GGG	0.744573	3.3:+89392870	MS.gene073043:CDS
TGGGATCATCGAATATAACG+AGG	0.757360	3.3:-89393241	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AAAAACTGCAAAGATTGTAA+GGG	+	chr3.3:89392341-89392360	MS.gene073043:CDS	25.0%
!	TACACAACAACATATATTTC+AGG	-	chr3.3:89392842-89392861	None:intergenic	25.0%
	AAAACTGCAAAGATTGTAAG+GGG	+	chr3.3:89392342-89392361	MS.gene073043:CDS	30.0%
	AAATGTGTCTGTGAACAATT+GGG	-	chr3.3:89393040-89393059	None:intergenic	30.0%
	AAGCAGTTTCGAAAAACTTA+AGG	-	chr3.3:89392986-89393005	None:intergenic	30.0%
	AGCAGTTTCGAAAAACTTAA+GGG	-	chr3.3:89392985-89393004	None:intergenic	30.0%
	ATCAAGTACACGATAAAGAA+TGG	-	chr3.3:89392175-89392194	None:intergenic	30.0%
	CAAAAACTGCAAAGATTGTA+AGG	+	chr3.3:89392340-89392359	MS.gene073043:CDS	30.0%
	GATTTCACTGTGTAAAGAAA+TGG	+	chr3.3:89392410-89392429	MS.gene073043:CDS	30.0%
	TATGTTGTTGTGTAAGATCA+TGG	+	chr3.3:89392848-89392867	MS.gene073043:CDS	30.0%
	TTAGGAATCAAGGAGAAAAA+GGG	-	chr3.3:89392318-89392337	None:intergenic	30.0%
	AAGGTCAGTAAGATTTGTGA+TGG	-	chr3.3:89392241-89392260	None:intergenic	35.0%
	ACTCAGTTGCTAAAATACCA+GGG	+	chr3.3:89392373-89392392	MS.gene073043:CDS	35.0%
	CTCATTAAGAAACCTTCCAA+AGG	+	chr3.3:89392626-89392645	MS.gene073043:CDS	35.0%
	CTTAGGAATCAAGGAGAAAA+AGG	-	chr3.3:89392319-89392338	None:intergenic	35.0%
	GAAATGTGTCTGTGAACAAT+TGG	-	chr3.3:89393041-89393060	None:intergenic	35.0%
	TAGAGACCATTTCCAATGTT+GGG	+	chr3.3:89393291-89393310	MS.gene073043:CDS	35.0%
	TGGTTGACAGTCTTTATGTT+AGG	+	chr3.3:89393318-89393337	MS.gene073043:CDS	35.0%
	TTAGAGACCATTTCCAATGT+TGG	+	chr3.3:89393290-89393309	MS.gene073043:CDS	35.0%
!	AAGCTTTGACTCTTCTTTCT+GGG	+	chr3.3:89392526-89392545	MS.gene073043:CDS	35.0%
!	AGTTTTTGCCTTAGGAATCA+AGG	-	chr3.3:89392328-89392347	None:intergenic	35.0%
!	ATCTTTGCAGTTTTTGCCTT+AGG	-	chr3.3:89392336-89392355	None:intergenic	35.0%
!	ATTTTGGACAAGAAGTTTGC+TGG	+	chr3.3:89393194-89393213	MS.gene073043:CDS	35.0%
!	CTTTTTCTCCTTGATTCCTA+AGG	+	chr3.3:89392317-89392336	MS.gene073043:CDS	35.0%
!	GAAGATGTCTCAGATGATTT+TGG	+	chr3.3:89393178-89393197	MS.gene073043:CDS	35.0%
!	GGGTGGAATTATTTCTTCTA+AGG	+	chr3.3:89392890-89392909	MS.gene073043:CDS	35.0%
!	TATTCCACTCTGAAGATCTA+TGG	-	chr3.3:89392721-89392740	None:intergenic	35.0%
!!	AAATGGTCTCTAAAGTTGCA+GGG	-	chr3.3:89393283-89393302	None:intergenic	35.0%
!!	AAGAGCATTGAAAGACTCAA+AGG	-	chr3.3:89392796-89392815	None:intergenic	35.0%
!!	GGAATTATTTCTTCTAAGGC+AGG	+	chr3.3:89392894-89392913	MS.gene073043:CDS	35.0%
!!	TTTTGGACAAGAAGTTTGCT+GGG	+	chr3.3:89393195-89393214	MS.gene073043:CDS	35.0%
	AAGGCAGGATTGCAATATGT+TGG	+	chr3.3:89392909-89392928	MS.gene073043:CDS	40.0%
	AATACTTCATGCTGAGGAGA+AGG	+	chr3.3:89392737-89392756	MS.gene073043:CDS	40.0%
	ACAAAGATTCTGCTCCAGAA+GGG	-	chr3.3:89393078-89393097	None:intergenic	40.0%
	AGAATGGATATCGCATCAGA+AGG	-	chr3.3:89392159-89392178	None:intergenic	40.0%
	AGGCAGGATTGCAATATGTT+GGG	+	chr3.3:89392910-89392929	MS.gene073043:CDS	40.0%
	AGGGTATATTGCATCAGTCT+TGG	-	chr3.3:89393264-89393283	None:intergenic	40.0%
	ATCTTATCTTCCTGCCACAA+CGG	+	chr3.3:89392101-89392120	MS.gene073043:CDS	40.0%
	CAAATCTTACTGACCTTCTC+AGG	+	chr3.3:89392244-89392263	MS.gene073043:CDS	40.0%
	CACTTTCCCAACATTGGAAA+TGG	-	chr3.3:89393300-89393319	None:intergenic	40.0%
	CATTTCCAATGTTGGGAAAG+TGG	+	chr3.3:89393298-89393317	MS.gene073043:CDS	40.0%
	GAATGGATATCGCATCAGAA+GGG	-	chr3.3:89392158-89392177	None:intergenic	40.0%
	GACTCAGTTGCTAAAATACC+AGG	+	chr3.3:89392372-89392391	MS.gene073043:CDS	40.0%
	GCAATCTCAACTCTTGAGAA+TGG	-	chr3.3:89393113-89393132	None:intergenic	40.0%
	GGGTATATTGCATCAGTCTT+GGG	-	chr3.3:89393263-89393282	None:intergenic	40.0%
	TACAAAGATTCTGCTCCAGA+AGG	-	chr3.3:89393079-89393098	None:intergenic	40.0%
	TGGGATCATCGAATATAACG+AGG	-	chr3.3:89393244-89393263	None:intergenic	40.0%
	TGTGTAAAGAAATGGTGCAG+TGG	+	chr3.3:89392418-89392437	MS.gene073043:CDS	40.0%
	TTCAGGCTGAAAATAGCCTT+AGG	-	chr3.3:89392825-89392844	None:intergenic	40.0%
	TTCCAATTGTTCACGTTGAG+CGG	+	chr3.3:89393156-89393175	MS.gene073043:CDS	40.0%
	TTTGACTCTTCTTTCTGGGT+TGG	+	chr3.3:89392530-89392549	MS.gene073043:CDS	40.0%
!	AGCGCTTTTGATGGAAACTA+AGG	+	chr3.3:89392494-89392513	MS.gene073043:CDS	40.0%
!	ATCGAATATAACGAGGCATC+CGG	-	chr3.3:89393237-89393256	None:intergenic	40.0%
!	GAAGCTTTGACTCTTCTTTC+TGG	+	chr3.3:89392525-89392544	MS.gene073043:CDS	40.0%
!	TCAGGCTGAAAATAGCCTTA+GGG	-	chr3.3:89392824-89392843	None:intergenic	40.0%
!!	CTGAAAAGCGTACTTTTCTG+AGG	+	chr3.3:89392448-89392467	MS.gene073043:CDS	40.0%
!!	GAAATGGTCTCTAAAGTTGC+AGG	-	chr3.3:89393284-89393303	None:intergenic	40.0%
!!	GTTTTTCGAAACTGCTTTGC+AGG	+	chr3.3:89392989-89393008	MS.gene073043:CDS	40.0%
!!	TTCTGGAGCAGAATCTTTGT+AGG	+	chr3.3:89393078-89393097	MS.gene073043:CDS	40.0%
!!!	TTTTCTGAGGCAACGAATTG+AGG	+	chr3.3:89392461-89392480	MS.gene073043:CDS	40.0%
	AACTGCTTTGCAGGACTACA+AGG	+	chr3.3:89392998-89393017	MS.gene073043:CDS	45.0%
	AGAGCTTCTGGTGAAGAAGA+TGG	-	chr3.3:89392201-89392220	None:intergenic	45.0%
	ATCTGTAGATCAGATGTCCC+TGG	-	chr3.3:89392393-89392412	None:intergenic	45.0%
	CAATGCTCTTGAAGACCCTA+AGG	+	chr3.3:89392806-89392825	MS.gene073043:CDS	45.0%
	CTGAGCAATTGAATCCGTTG+TGG	-	chr3.3:89392118-89392137	None:intergenic	45.0%
	GAGTGGAATACTTCATGCTG+AGG	+	chr3.3:89392731-89392750	MS.gene073043:CDS	45.0%
	GGATTCAATTGCTCAGGCAT+TGG	+	chr3.3:89392122-89392141	MS.gene073043:CDS	45.0%
	GTCAACCACTTTCCCAACAT+TGG	-	chr3.3:89393306-89393325	None:intergenic	45.0%
	TCTTTCATACGCAGAGCTTC+TGG	-	chr3.3:89392213-89392232	None:intergenic	45.0%
	TGTTAGGTCTGCCAAGATCA+TGG	+	chr3.3:89393334-89393353	MS.gene073043:CDS	45.0%
	TTCCGCTCAACGTGAACAAT+TGG	-	chr3.3:89393161-89393180	None:intergenic	45.0%
	TTTGCTGGGACATTGGATCA+AGG	+	chr3.3:89393209-89393228	MS.gene073043:CDS	45.0%
!	AAGACTTGCAGCGCTTTTGA+TGG	+	chr3.3:89392485-89392504	MS.gene073043:CDS	45.0%
!	CACAACGGATTCAATTGCTC+AGG	+	chr3.3:89392116-89392135	MS.gene073043:CDS	45.0%
!	GTGAATCAAGCTGATGACGT+GGG	+	chr3.3:89392870-89392889	MS.gene073043:CDS	45.0%
!!	CAAGAAGTTTGCTGGGACAT+TGG	+	chr3.3:89393202-89393221	MS.gene073043:CDS	45.0%
!!	CTCCAGAAGGGTATCATACA+GGG	-	chr3.3:89393066-89393085	None:intergenic	45.0%
!!	TCTTTCTGGGTTGGTCAAAG+AGG	+	chr3.3:89392539-89392558	MS.gene073043:CDS	45.0%
!!	TTCAATTGCTCAGGCATTGG+AGG	+	chr3.3:89392125-89392144	MS.gene073043:CDS	45.0%
	AAAGGCAAAAGCTGCCCTCA+CGG	+	chr3.3:89392644-89392663	MS.gene073043:CDS	50.0%
	ACCTTCTCAGGCAAGAGAAC+AGG	+	chr3.3:89392256-89392275	MS.gene073043:CDS	50.0%
	AGCTCTGCGTATGAAAGAGC+AGG	+	chr3.3:89392215-89392234	MS.gene073043:CDS	50.0%
	AGGACTACAAGGCACAGTTG+GGG	+	chr3.3:89393009-89393028	MS.gene073043:CDS	50.0%
	AGGGCCTCAATGAAGTGAGA+AGG	-	chr3.3:89392299-89392318	None:intergenic	50.0%
	ATGTGCCTCCTGCTCAACAA+GGG	+	chr3.3:89392694-89392713	MS.gene073043:CDS	50.0%
	CAGGACTACAAGGCACAGTT+GGG	+	chr3.3:89393008-89393027	MS.gene073043:CDS	50.0%
	CCTTCTCAGGCAAGAGAACA+GGG	+	chr3.3:89392257-89392276	MS.gene073043:CDS	50.0%
	CTTCTCAGGCAAGAGAACAG+GGG	+	chr3.3:89392258-89392277	MS.gene073043:CDS	50.0%
	GCAATATGTTGGGCCTGACT+TGG	+	chr3.3:89392920-89392939	MS.gene073043:CDS	50.0%
	GCAATTGAATCCGTTGTGGC+AGG	-	chr3.3:89392114-89392133	None:intergenic	50.0%
	GCAGCCTTCTCACTTCATTG+AGG	+	chr3.3:89392292-89392311	MS.gene073043:CDS	50.0%
	GCTTTCATCGCATCCAAGTC+AGG	-	chr3.3:89392936-89392955	None:intergenic	50.0%
	GTCCCTGTATGATACCCTTC+TGG	+	chr3.3:89393061-89393080	MS.gene073043:CDS	50.0%
	TATGTGCCTCCTGCTCAACA+AGG	+	chr3.3:89392693-89392712	MS.gene073043:CDS	50.0%
!	AATCAAGCTGATGACGTGGG+TGG	+	chr3.3:89392873-89392892	MS.gene073043:CDS	50.0%
!	GGTGAATCAAGCTGATGACG+TGG	+	chr3.3:89392869-89392888	MS.gene073043:CDS	50.0%
!!	CTGGGTTGGTCAAAGAGGTT+AGG	+	chr3.3:89392544-89392563	MS.gene073043:CDS	50.0%
!!	GCTCCAGAAGGGTATCATAC+AGG	-	chr3.3:89393067-89393086	None:intergenic	50.0%
	AGCTGTTCTAGCAGCCGTGA+GGG	-	chr3.3:89392661-89392680	None:intergenic	55.0%
	CCCTGTTCTCTTGCCTGAGA+AGG	-	chr3.3:89392260-89392279	None:intergenic	55.0%
	GCAGGACTACAAGGCACAGT+TGG	+	chr3.3:89393007-89393026	MS.gene073043:CDS	55.0%
	GGACTACAAGGCACAGTTGG+GGG	+	chr3.3:89393010-89393029	MS.gene073043:CDS	55.0%
	GGGACATTGGATCAAGGTGC+CGG	+	chr3.3:89393215-89393234	MS.gene073043:CDS	55.0%
	GGGGCCATAGATCTTCAGAG+TGG	+	chr3.3:89392714-89392733	MS.gene073043:CDS	55.0%
	TCTATGGCCCCTTGTTGAGC+AGG	-	chr3.3:89392705-89392724	None:intergenic	55.0%
	TGTGCCTCCTGCTCAACAAG+GGG	+	chr3.3:89392695-89392714	MS.gene073043:CDS	55.0%
!	GGGCAGCTTTTGCCTTTGGA+AGG	-	chr3.3:89392641-89392660	None:intergenic	55.0%
!	GTGAGGGCAGCTTTTGCCTT+TGG	-	chr3.3:89392645-89392664	None:intergenic	55.0%
	ATGGCCCCTTGTTGAGCAGG+AGG	-	chr3.3:89392702-89392721	None:intergenic	60.0%
	CAGCTGTTCTAGCAGCCGTG+AGG	-	chr3.3:89392662-89392681	None:intergenic	60.0%
	CAGGCAAGAGAACAGGGGAG+AGG	+	chr3.3:89392263-89392282	MS.gene073043:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	89392093	89393361	89392093	ID=MS.gene073043
chr3.3	mRNA	89392093	89393361	89392093	ID=MS.gene073043.t1;Parent=MS.gene073043
chr3.3	exon	89392093	89393361	89392093	ID=MS.gene073043.t1.exon1;Parent=MS.gene073043.t1
chr3.3	CDS	89392093	89393361	89392093	ID=cds.MS.gene073043.t1;Parent=MS.gene073043.t1

Gene Sequence

>MS.gene073043

ATGTCTACATCTTATCTTCCTGCCACAACGGATTCAATTGCTCAGGCATTGGAGGCTAAAGACCCTTCTGATGCGATATCCATTCTTTATCGTGTACTTGATGATCCATCTTCTTCACCAGAAGCTCTGCGTATGAAAGAGCAGGCCATCACAAATCTTACTGACCTTCTCAGGCAAGAGAACAGGGGAGAGGATCTGCGCAGCCTTCTCACTTCATTGAGGCCCTTTTTCTCCTTGATTCCTAAGGCAAAAACTGCAAAGATTGTAAGGGGAATAATTGACTCAGTTGCTAAAATACCAGGGACATCTGATCTACAGATTTCACTGTGTAAAGAAATGGTGCAGTGGACTCGTGCTGAAAAGCGTACTTTTCTGAGGCAACGAATTGAGGCAAGACTTGCAGCGCTTTTGATGGAAACTAAGGAGTATTCAGAAGCTTTGACTCTTCTTTCTGGGTTGGTCAAAGAGGTTAGGAGATTAGATGACAAACTTCTTCTTGTAGACATTGACTTGCTCGAAAGCAAACTGCACTTCTCATTAAGAAACCTTCCAAAGGCAAAAGCTGCCCTCACGGCTGCTAGAACAGCTGCAAATGCTATTTATGTGCCTCCTGCTCAACAAGGGGCCATAGATCTTCAGAGTGGAATACTTCATGCTGAGGAGAAGGACTACAAAACTGCATACAGCTATTTCTTTGAAGCCTTTGAGTCTTTCAATGCTCTTGAAGACCCTAAGGCTATTTTCAGCCTGAAATATATGTTGTTGTGTAAGATCATGGTGAATCAAGCTGATGACGTGGGTGGAATTATTTCTTCTAAGGCAGGATTGCAATATGTTGGGCCTGACTTGGATGCGATGAAAGCTGTTGCTGATGCTTATTCTAAGCGATCCCTTAAGTTTTTCGAAACTGCTTTGCAGGACTACAAGGCACAGTTGGGGGAAGACCCAATTGTTCACAGACACATTTCGTCCCTGTATGATACCCTTCTGGAGCAGAATCTTTGTAGGTTGATTGAGCCATTCTCAAGAGTTGAGATTGCACATATTGCTGAGCTTATCGAGCTTCCAATTGTTCACGTTGAGCGGAAGATGTCTCAGATGATTTTGGACAAGAAGTTTGCTGGGACATTGGATCAAGGTGCCGGATGCCTCGTTATATTCGATGATCCCAAGACTGATGCAATATACCCTGCAACTTTAGAGACCATTTCCAATGTTGGGAAAGTGGTTGACAGTCTTTATGTTAGGTCTGCCAAGATCATGGCATGA

Protein sequence

>MS.gene073043.t1

MSTSYLPATTDSIAQALEAKDPSDAISILYRVLDDPSSSPEALRMKEQAITNLTDLLRQENRGEDLRSLLTSLRPFFSLIPKAKTAKIVRGIIDSVAKIPGTSDLQISLCKEMVQWTRAEKRTFLRQRIEARLAALLMETKEYSEALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALEDPKAIFSLKYMLLCKIMVNQADDVGGIISSKAGLQYVGPDLDAMKAVADAYSKRSLKFFETALQDYKAQLGEDPIVHRHISSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPIVHVERKMSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLYVRSAKIMA