AlfalfaGEDB | MS.gene073044

M. sativa cultivar XinJiangDaYe / MS.gene073044

KEGG: K03036
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF01399.30 PF18055.4 PF18503.4

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073044.t1	XP_024635331.1	99.3	422	3	0	1	422	1	422	4.10E-225	790.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073044.t1	Q9LP45	86.7	415	54	1	8	422	6	419	6.8e-197	688.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073044.t1	G7J2W0	99.3	422	3	0	1	422	250	671	2.9e-225	790.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene48400	MS.gene073044	PPI
MS.gene073044	MS.gene031682	PPI
MS.gene073044	MS.gene012127	PPI
MS.gene073044	MS.gene21801	PPI
MS.gene073044	MS.gene48279	PPI
MS.gene073044	MS.gene014393	PPI
MS.gene073044	MS.gene044013	PPI
MS.gene073044	MS.gene09974	PPI
MS.gene073044	MS.gene67099	PPI
MS.gene073044	MS.gene59485	PPI
MS.gene073044	MS.gene002648	PPI
MS.gene073044	MS.gene44230	PPI
MS.gene073044	MS.gene48281	PPI
MS.gene073044	MS.gene057144	PPI
MS.gene073044	MS.gene064786	PPI
MS.gene011376	MS.gene073044	PPI
MS.gene073044	MS.gene52815	PPI
MS.gene073044	MS.gene033335	PPI
MS.gene073044	MS.gene006626	PPI
MS.gene073044	MS.gene68079	PPI
MS.gene40486	MS.gene073044	PPI
MS.gene67460	MS.gene073044	PPI
MS.gene073044	MS.gene89672	PPI
MS.gene073044	MS.gene69373	PPI
MS.gene073044	MS.gene004328	PPI
MS.gene073044	MS.gene24375	PPI
MS.gene073044	MS.gene64789	PPI
MS.gene073044	MS.gene024828	PPI
MS.gene073044	MS.gene057145	PPI
MS.gene073044	MS.gene21169	PPI
MS.gene073044	MS.gene062770	PPI
MS.gene073044	MS.gene017622	PPI
MS.gene073044	MS.gene025808	PPI
MS.gene073044	MS.gene058061	PPI
MS.gene045570	MS.gene073044	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073044.t1	MTR_3g109300	99.289	422	3	0	1	422	250	671	0.0	847
MS.gene073044.t1	MTR_1g009010	93.079	419	29	0	3	421	2	420	0.0	768
MS.gene073044.t1	MTR_7g087530	24.403	377	265	8	14	379	33	400	4.69e-22	98.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073044.t1	AT1G29150	86.747	415	54	1	8	422	6	419	0.0	706
MS.gene073044.t1	AT1G29150	86.747	415	54	1	8	422	6	419	0.0	706
MS.gene073044.t1	AT2G26990	21.892	370	269	8	21	379	40	400	1.47e-16	81.6

Find 96 sgRNAs with CRISPR-Local

Find 111 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAGCTTTGACTCTTCTTTC+TGG	0.076579	3.3:+89420017	MS.gene073044:CDS
GAAGATGTCTCAGATGATTT+TGG	0.221126	3.3:+89420670	MS.gene073044:CDS
TACACAACAACATATATTTC+AGG	0.264578	3.3:-89420331	None:intergenic
CTTAGGAATCAAGGAGAAAA+AGG	0.267105	3.3:-89419808	None:intergenic
AAGCTTTGACTCTTCTTTCT+GGG	0.325672	3.3:+89420018	MS.gene073044:CDS
GTCCCTGTATGATACCCTTC+TGG	0.327271	3.3:+89420553	MS.gene073044:CDS
CAAGAAGTTTGCTGGGACAT+TGG	0.347751	3.3:+89420694	MS.gene073044:CDS
GGGTGGAATTATTTCTTCTA+AGG	0.348906	3.3:+89420382	MS.gene073044:CDS
ACCTTCTCAGGCAAGAGAAC+AGG	0.350066	3.3:+89419748	MS.gene073044:CDS
TCTTTCATACGCAGAGCTTC+TGG	0.357829	3.3:-89419702	None:intergenic
GAAATGGTCTCTAAAGTTGC+AGG	0.361989	3.3:-89420773	None:intergenic
TGGTTGACAGTCTTTATGTT+AGG	0.381996	3.3:+89420810	MS.gene073044:CDS
CACTTTCCCAACATTGGAAA+TGG	0.391471	3.3:-89420789	None:intergenic
TATTCCACTCTGAAGATCTA+TGG	0.400897	3.3:-89420210	None:intergenic
CTGGGTTGGTCAAAGAGGTT+AGG	0.401504	3.3:+89420036	MS.gene073044:CDS
TTCCGCTCAACGTGAACAAT+TGG	0.403038	3.3:-89420650	None:intergenic
TAGAGACCATTTCCAATGTT+GGG	0.407846	3.3:+89420783	MS.gene073044:CDS
GAAATGTGTCTGTGAACAAT+TGG	0.411462	3.3:-89420530	None:intergenic
TTTGACTCTTCTTTCTGGGT+TGG	0.413470	3.3:+89420022	MS.gene073044:CDS
CAGGACTACAAGGCACAGTT+GGG	0.423474	3.3:+89420500	MS.gene073044:CDS
TTCTGGAGCAGAATCTTTGT+AGG	0.427259	3.3:+89420570	MS.gene073044:CDS
GGGTATATTGCATCAGTCTT+GGG	0.434505	3.3:-89420752	None:intergenic
CATTTCCAATGTTGGGAAAG+TGG	0.438184	3.3:+89420790	MS.gene073044:CDS
CCCTGTTCTCTTGCCTGAGA+AGG	0.446003	3.3:-89419749	None:intergenic
GAGAGCTCATGCCATGATCT+TGG	0.450538	3.3:-89420837	None:intergenic
CAAATCTTACTGACCTTCTC+AGG	0.450662	3.3:+89419736	MS.gene073044:CDS
AGGGTATATTGCATCAGTCT+TGG	0.452702	3.3:-89420753	None:intergenic
TTCAGGCTGAAAATAGCCTT+AGG	0.454754	3.3:-89420314	None:intergenic
GGAATTATTTCTTCTAAGGC+AGG	0.456178	3.3:+89420386	MS.gene073044:CDS
TCTATGGCCCCTTGTTGAGC+AGG	0.465189	3.3:-89420194	None:intergenic
GATTTCACTGTGTAAAGAAA+TGG	0.466235	3.3:+89419902	MS.gene073044:CDS
TGTTAGGTCTGCCAAGATCA+TGG	0.470208	3.3:+89420826	MS.gene073044:CDS
GGATTCAATTGCTCAGGCAT+TGG	0.471759	3.3:+89419614	MS.gene073044:CDS
ATCAAGTACACGATAAAGAA+TGG	0.473844	3.3:-89419664	None:intergenic
GCTCCAGAAGGGTATCATAC+AGG	0.474854	3.3:-89420556	None:intergenic
AAGGCAGGATTGCAATATGT+TGG	0.477736	3.3:+89420401	MS.gene073044:CDS
GCTTTCATCGCATCCAAGTC+AGG	0.487211	3.3:-89420425	None:intergenic
TTAGAGACCATTTCCAATGT+TGG	0.488579	3.3:+89420782	MS.gene073044:CDS
GTCAACCACTTTCCCAACAT+TGG	0.489301	3.3:-89420795	None:intergenic
GCAGGACTACAAGGCACAGT+TGG	0.489808	3.3:+89420499	MS.gene073044:CDS
TTCAATTGCTCAGGCATTGG+AGG	0.497862	3.3:+89419617	MS.gene073044:CDS
AGGCAGGATTGCAATATGTT+GGG	0.501095	3.3:+89420402	MS.gene073044:CDS
AACTGCTTTGCAGGACTACA+AGG	0.501162	3.3:+89420490	MS.gene073044:CDS
CAATGCTCTTGAAGACCCTA+AGG	0.511010	3.3:+89420298	MS.gene073044:CDS
GCAATATGTTGGGCCTGACT+TGG	0.511624	3.3:+89420412	MS.gene073044:CDS
CCTTCTCAGGCAAGAGAACA+GGG	0.514248	3.3:+89419749	MS.gene073044:CDS
TCAGGCTGAAAATAGCCTTA+GGG	0.519784	3.3:-89420313	None:intergenic
GCAATCTCAACTCTTGAGAA+TGG	0.520686	3.3:-89420602	None:intergenic
GCAATTGAATCCGTTGTGGC+AGG	0.520844	3.3:-89419603	None:intergenic
ATCGAATATAACGAGGCATC+CGG	0.522107	3.3:-89420726	None:intergenic
GACTCAGTTGCTAAAATACC+AGG	0.527380	3.3:+89419864	MS.gene073044:CDS
CACAACGGATTCAATTGCTC+AGG	0.533092	3.3:+89419608	MS.gene073044:CDS
AAGAGCATTGAAAGACTCAA+AGG	0.538169	3.3:-89420285	None:intergenic
AGCTCTGCGTATGAAAGAGC+AGG	0.542904	3.3:+89419707	MS.gene073044:CDS
CAGCTGTTCTAGCAGCCGTG+AGG	0.548019	3.3:-89420151	None:intergenic
AGAGCTTCTGGTGAAGAAGA+TGG	0.548989	3.3:-89419690	None:intergenic
TATGTTGTTGTGTAAGATCA+TGG	0.550906	3.3:+89420340	MS.gene073044:CDS
AATACTTCATGCTGAGGAGA+AGG	0.551692	3.3:+89420229	MS.gene073044:CDS
TTCCAATTGTTCACGTTGAG+CGG	0.552851	3.3:+89420648	MS.gene073044:CDS
TCTTTCTGGGTTGGTCAAAG+AGG	0.554089	3.3:+89420031	MS.gene073044:CDS
AGCTGTTCTAGCAGCCGTGA+GGG	0.554968	3.3:-89420150	None:intergenic
TTTGCTGGGACATTGGATCA+AGG	0.555668	3.3:+89420701	MS.gene073044:CDS
TATGTGCCTCCTGCTCAACA+AGG	0.559971	3.3:+89420185	MS.gene073044:CDS
CTCCAGAAGGGTATCATACA+GGG	0.564510	3.3:-89420555	None:intergenic
ATCTGTAGATCAGATGTCCC+TGG	0.569702	3.3:-89419882	None:intergenic
AAATGTGTCTGTGAACAATT+GGG	0.569773	3.3:-89420529	None:intergenic
TACAAAGATTCTGCTCCAGA+AGG	0.569886	3.3:-89420568	None:intergenic
AGAATGGATATCGCATCAGA+AGG	0.570735	3.3:-89419648	None:intergenic
GAATGGATATCGCATCAGAA+GGG	0.585707	3.3:-89419647	None:intergenic
GGGACATTGGATCAAGGTGC+CGG	0.586404	3.3:+89420707	MS.gene073044:CDS
GCAGCCTTCTCACTTCATTG+AGG	0.586407	3.3:+89419784	MS.gene073044:CDS
CTCATTAAGAAACCTTCCAA+AGG	0.587775	3.3:+89420118	MS.gene073044:CDS
CAGGCAAGAGAACAGGGGAG+AGG	0.594061	3.3:+89419755	MS.gene073044:CDS
ATCTTATCTTCCTGCCACAA+CGG	0.596364	3.3:+89419593	MS.gene073044:CDS
AAAGGCAAAAGCTGCCCTCA+CGG	0.605293	3.3:+89420136	MS.gene073044:CDS
AAGGTCAGTAAGATTTGTGA+TGG	0.606087	3.3:-89419730	None:intergenic
AGGGCCTCAATGAAGTGAGA+AGG	0.611750	3.3:-89419788	None:intergenic
ATGTGCCTCCTGCTCAACAA+GGG	0.612734	3.3:+89420186	MS.gene073044:CDS
ATGGCCCCTTGTTGAGCAGG+AGG	0.618931	3.3:-89420191	None:intergenic
ACAAAGATTCTGCTCCAGAA+GGG	0.620348	3.3:-89420567	None:intergenic
AAAACTGCAAAGATTGTAAG+GGG	0.631797	3.3:+89419834	MS.gene073044:CDS
GAGTGGAATACTTCATGCTG+AGG	0.636952	3.3:+89420223	MS.gene073044:CDS
AAATGGTCTCTAAAGTTGCA+GGG	0.639902	3.3:-89420772	None:intergenic
TGTGCCTCCTGCTCAACAAG+GGG	0.645095	3.3:+89420187	MS.gene073044:CDS
AGGAAGATAAGATGTAGACA+TGG	0.676910	3.3:-89419583	None:intergenic
AGGACTACAAGGCACAGTTG+GGG	0.686447	3.3:+89420501	MS.gene073044:CDS
GGACTACAAGGCACAGTTGG+GGG	0.689123	3.3:+89420502	MS.gene073044:CDS
CTGAGCAATTGAATCCGTTG+TGG	0.699339	3.3:-89419607	None:intergenic
TGTGTAAAGAAATGGTGCAG+TGG	0.703348	3.3:+89419910	MS.gene073044:CDS
AATCAAGCTGATGACGTGGG+TGG	0.707192	3.3:+89420365	MS.gene073044:CDS
CTTCTCAGGCAAGAGAACAG+GGG	0.711755	3.3:+89419750	MS.gene073044:CDS
ACTCAGTTGCTAAAATACCA+GGG	0.713806	3.3:+89419865	MS.gene073044:CDS
GGTGAATCAAGCTGATGACG+TGG	0.718460	3.3:+89420361	MS.gene073044:CDS
GGGGCCATAGATCTTCAGAG+TGG	0.726182	3.3:+89420206	MS.gene073044:CDS
GTGAATCAAGCTGATGACGT+GGG	0.744573	3.3:+89420362	MS.gene073044:CDS
TGGGATCATCGAATATAACG+AGG	0.757360	3.3:-89420733	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AAAAACTGCAAAGATTGTAA+GGG	+	chr3.3:89419833-89419852	MS.gene073044:CDS	25.0%
!	TACACAACAACATATATTTC+AGG	-	chr3.3:89420334-89420353	None:intergenic	25.0%
	AAAACTGCAAAGATTGTAAG+GGG	+	chr3.3:89419834-89419853	MS.gene073044:CDS	30.0%
	AAATGTGTCTGTGAACAATT+GGG	-	chr3.3:89420532-89420551	None:intergenic	30.0%
	AAGCAGTTTCGAAAAACTTA+AGG	-	chr3.3:89420478-89420497	None:intergenic	30.0%
	AGCAGTTTCGAAAAACTTAA+GGG	-	chr3.3:89420477-89420496	None:intergenic	30.0%
	ATCAAGTACACGATAAAGAA+TGG	-	chr3.3:89419667-89419686	None:intergenic	30.0%
	CAAAAACTGCAAAGATTGTA+AGG	+	chr3.3:89419832-89419851	MS.gene073044:CDS	30.0%
	GATTTCACTGTGTAAAGAAA+TGG	+	chr3.3:89419902-89419921	MS.gene073044:CDS	30.0%
	TATGTTGTTGTGTAAGATCA+TGG	+	chr3.3:89420340-89420359	MS.gene073044:CDS	30.0%
	TTAGGAATCAAGGAGAAAAA+GGG	-	chr3.3:89419810-89419829	None:intergenic	30.0%
	AAGGTCAGTAAGATTTGTGA+TGG	-	chr3.3:89419733-89419752	None:intergenic	35.0%
	ACTCAGTTGCTAAAATACCA+GGG	+	chr3.3:89419865-89419884	MS.gene073044:CDS	35.0%
	CTCATTAAGAAACCTTCCAA+AGG	+	chr3.3:89420118-89420137	MS.gene073044:CDS	35.0%
	CTTAGGAATCAAGGAGAAAA+AGG	-	chr3.3:89419811-89419830	None:intergenic	35.0%
	GAAATGTGTCTGTGAACAAT+TGG	-	chr3.3:89420533-89420552	None:intergenic	35.0%
	TAGAGACCATTTCCAATGTT+GGG	+	chr3.3:89420783-89420802	MS.gene073044:CDS	35.0%
	TGGTTGACAGTCTTTATGTT+AGG	+	chr3.3:89420810-89420829	MS.gene073044:CDS	35.0%
	TTAGAGACCATTTCCAATGT+TGG	+	chr3.3:89420782-89420801	MS.gene073044:CDS	35.0%
!	AAGCTTTGACTCTTCTTTCT+GGG	+	chr3.3:89420018-89420037	MS.gene073044:CDS	35.0%
!	AGTTTTTGCCTTAGGAATCA+AGG	-	chr3.3:89419820-89419839	None:intergenic	35.0%
!	ATCTTTGCAGTTTTTGCCTT+AGG	-	chr3.3:89419828-89419847	None:intergenic	35.0%
!	ATTTTGGACAAGAAGTTTGC+TGG	+	chr3.3:89420686-89420705	MS.gene073044:CDS	35.0%
!	CTTTTTCTCCTTGATTCCTA+AGG	+	chr3.3:89419809-89419828	MS.gene073044:CDS	35.0%
!	GAAGATGTCTCAGATGATTT+TGG	+	chr3.3:89420670-89420689	MS.gene073044:CDS	35.0%
!	GGGTGGAATTATTTCTTCTA+AGG	+	chr3.3:89420382-89420401	MS.gene073044:CDS	35.0%
!	TATTCCACTCTGAAGATCTA+TGG	-	chr3.3:89420213-89420232	None:intergenic	35.0%
!!	AAATGGTCTCTAAAGTTGCA+GGG	-	chr3.3:89420775-89420794	None:intergenic	35.0%
!!	AAGAGCATTGAAAGACTCAA+AGG	-	chr3.3:89420288-89420307	None:intergenic	35.0%
!!	GGAATTATTTCTTCTAAGGC+AGG	+	chr3.3:89420386-89420405	MS.gene073044:CDS	35.0%
!!	TTTTGGACAAGAAGTTTGCT+GGG	+	chr3.3:89420687-89420706	MS.gene073044:CDS	35.0%
	AAGGCAGGATTGCAATATGT+TGG	+	chr3.3:89420401-89420420	MS.gene073044:CDS	40.0%
	AATACTTCATGCTGAGGAGA+AGG	+	chr3.3:89420229-89420248	MS.gene073044:CDS	40.0%
	ACAAAGATTCTGCTCCAGAA+GGG	-	chr3.3:89420570-89420589	None:intergenic	40.0%
	AGAATGGATATCGCATCAGA+AGG	-	chr3.3:89419651-89419670	None:intergenic	40.0%
	AGGCAGGATTGCAATATGTT+GGG	+	chr3.3:89420402-89420421	MS.gene073044:CDS	40.0%
	AGGGTATATTGCATCAGTCT+TGG	-	chr3.3:89420756-89420775	None:intergenic	40.0%
	ATCTTATCTTCCTGCCACAA+CGG	+	chr3.3:89419593-89419612	MS.gene073044:CDS	40.0%
	CAAATCTTACTGACCTTCTC+AGG	+	chr3.3:89419736-89419755	MS.gene073044:CDS	40.0%
	CACTTTCCCAACATTGGAAA+TGG	-	chr3.3:89420792-89420811	None:intergenic	40.0%
	CATTTCCAATGTTGGGAAAG+TGG	+	chr3.3:89420790-89420809	MS.gene073044:CDS	40.0%
	GAATGGATATCGCATCAGAA+GGG	-	chr3.3:89419650-89419669	None:intergenic	40.0%
	GACTCAGTTGCTAAAATACC+AGG	+	chr3.3:89419864-89419883	MS.gene073044:CDS	40.0%
	GCAATCTCAACTCTTGAGAA+TGG	-	chr3.3:89420605-89420624	None:intergenic	40.0%
	GGGTATATTGCATCAGTCTT+GGG	-	chr3.3:89420755-89420774	None:intergenic	40.0%
	TACAAAGATTCTGCTCCAGA+AGG	-	chr3.3:89420571-89420590	None:intergenic	40.0%
	TGGGATCATCGAATATAACG+AGG	-	chr3.3:89420736-89420755	None:intergenic	40.0%
	TGTGTAAAGAAATGGTGCAG+TGG	+	chr3.3:89419910-89419929	MS.gene073044:CDS	40.0%
	TTCAGGCTGAAAATAGCCTT+AGG	-	chr3.3:89420317-89420336	None:intergenic	40.0%
	TTCCAATTGTTCACGTTGAG+CGG	+	chr3.3:89420648-89420667	MS.gene073044:CDS	40.0%
	TTTGACTCTTCTTTCTGGGT+TGG	+	chr3.3:89420022-89420041	MS.gene073044:CDS	40.0%
!	AGCGCTTTTGATGGAAACTA+AGG	+	chr3.3:89419986-89420005	MS.gene073044:CDS	40.0%
!	ATCGAATATAACGAGGCATC+CGG	-	chr3.3:89420729-89420748	None:intergenic	40.0%
!	GAAGCTTTGACTCTTCTTTC+TGG	+	chr3.3:89420017-89420036	MS.gene073044:CDS	40.0%
!	TCAGGCTGAAAATAGCCTTA+GGG	-	chr3.3:89420316-89420335	None:intergenic	40.0%
!!	CTGAAAAGCGTACTTTTCTG+AGG	+	chr3.3:89419940-89419959	MS.gene073044:CDS	40.0%
!!	GAAATGGTCTCTAAAGTTGC+AGG	-	chr3.3:89420776-89420795	None:intergenic	40.0%
!!	GTTTTTCGAAACTGCTTTGC+AGG	+	chr3.3:89420481-89420500	MS.gene073044:CDS	40.0%
!!	TTCTGGAGCAGAATCTTTGT+AGG	+	chr3.3:89420570-89420589	MS.gene073044:CDS	40.0%
!!!	TTTTCTGAGGCAACGAATTG+AGG	+	chr3.3:89419953-89419972	MS.gene073044:CDS	40.0%
	AACTGCTTTGCAGGACTACA+AGG	+	chr3.3:89420490-89420509	MS.gene073044:CDS	45.0%
	AGAGCTTCTGGTGAAGAAGA+TGG	-	chr3.3:89419693-89419712	None:intergenic	45.0%
	ATCTGTAGATCAGATGTCCC+TGG	-	chr3.3:89419885-89419904	None:intergenic	45.0%
	CAATGCTCTTGAAGACCCTA+AGG	+	chr3.3:89420298-89420317	MS.gene073044:CDS	45.0%
	CTGAGCAATTGAATCCGTTG+TGG	-	chr3.3:89419610-89419629	None:intergenic	45.0%
	GAGTGGAATACTTCATGCTG+AGG	+	chr3.3:89420223-89420242	MS.gene073044:CDS	45.0%
	GGATTCAATTGCTCAGGCAT+TGG	+	chr3.3:89419614-89419633	MS.gene073044:CDS	45.0%
	GTCAACCACTTTCCCAACAT+TGG	-	chr3.3:89420798-89420817	None:intergenic	45.0%
	TCTTTCATACGCAGAGCTTC+TGG	-	chr3.3:89419705-89419724	None:intergenic	45.0%
	TGTTAGGTCTGCCAAGATCA+TGG	+	chr3.3:89420826-89420845	MS.gene073044:CDS	45.0%
	TTCCGCTCAACGTGAACAAT+TGG	-	chr3.3:89420653-89420672	None:intergenic	45.0%
	TTTGCTGGGACATTGGATCA+AGG	+	chr3.3:89420701-89420720	MS.gene073044:CDS	45.0%
!	AAGACTTGCAGCGCTTTTGA+TGG	+	chr3.3:89419977-89419996	MS.gene073044:CDS	45.0%
!	CACAACGGATTCAATTGCTC+AGG	+	chr3.3:89419608-89419627	MS.gene073044:CDS	45.0%
!	GTGAATCAAGCTGATGACGT+GGG	+	chr3.3:89420362-89420381	MS.gene073044:CDS	45.0%
!!	CAAGAAGTTTGCTGGGACAT+TGG	+	chr3.3:89420694-89420713	MS.gene073044:CDS	45.0%
!!	CTCCAGAAGGGTATCATACA+GGG	-	chr3.3:89420558-89420577	None:intergenic	45.0%
!!	TCTTTCTGGGTTGGTCAAAG+AGG	+	chr3.3:89420031-89420050	MS.gene073044:CDS	45.0%
!!	TTCAATTGCTCAGGCATTGG+AGG	+	chr3.3:89419617-89419636	MS.gene073044:CDS	45.0%
	AAAGGCAAAAGCTGCCCTCA+CGG	+	chr3.3:89420136-89420155	MS.gene073044:CDS	50.0%
	ACCTTCTCAGGCAAGAGAAC+AGG	+	chr3.3:89419748-89419767	MS.gene073044:CDS	50.0%
	AGCTCTGCGTATGAAAGAGC+AGG	+	chr3.3:89419707-89419726	MS.gene073044:CDS	50.0%
	AGGACTACAAGGCACAGTTG+GGG	+	chr3.3:89420501-89420520	MS.gene073044:CDS	50.0%
	AGGGCCTCAATGAAGTGAGA+AGG	-	chr3.3:89419791-89419810	None:intergenic	50.0%
	ATGTGCCTCCTGCTCAACAA+GGG	+	chr3.3:89420186-89420205	MS.gene073044:CDS	50.0%
	CAGGACTACAAGGCACAGTT+GGG	+	chr3.3:89420500-89420519	MS.gene073044:CDS	50.0%
	CCTTCTCAGGCAAGAGAACA+GGG	+	chr3.3:89419749-89419768	MS.gene073044:CDS	50.0%
	CTTCTCAGGCAAGAGAACAG+GGG	+	chr3.3:89419750-89419769	MS.gene073044:CDS	50.0%
	GCAATATGTTGGGCCTGACT+TGG	+	chr3.3:89420412-89420431	MS.gene073044:CDS	50.0%
	GCAATTGAATCCGTTGTGGC+AGG	-	chr3.3:89419606-89419625	None:intergenic	50.0%
	GCAGCCTTCTCACTTCATTG+AGG	+	chr3.3:89419784-89419803	MS.gene073044:CDS	50.0%
	GCTTTCATCGCATCCAAGTC+AGG	-	chr3.3:89420428-89420447	None:intergenic	50.0%
	GTCCCTGTATGATACCCTTC+TGG	+	chr3.3:89420553-89420572	MS.gene073044:CDS	50.0%
	TATGTGCCTCCTGCTCAACA+AGG	+	chr3.3:89420185-89420204	MS.gene073044:CDS	50.0%
!	AATCAAGCTGATGACGTGGG+TGG	+	chr3.3:89420365-89420384	MS.gene073044:CDS	50.0%
!	GGTGAATCAAGCTGATGACG+TGG	+	chr3.3:89420361-89420380	MS.gene073044:CDS	50.0%
!!	CTGGGTTGGTCAAAGAGGTT+AGG	+	chr3.3:89420036-89420055	MS.gene073044:CDS	50.0%
!!	GCTCCAGAAGGGTATCATAC+AGG	-	chr3.3:89420559-89420578	None:intergenic	50.0%
	AGCTGTTCTAGCAGCCGTGA+GGG	-	chr3.3:89420153-89420172	None:intergenic	55.0%
	CCCTGTTCTCTTGCCTGAGA+AGG	-	chr3.3:89419752-89419771	None:intergenic	55.0%
	GCAGGACTACAAGGCACAGT+TGG	+	chr3.3:89420499-89420518	MS.gene073044:CDS	55.0%
	GGACTACAAGGCACAGTTGG+GGG	+	chr3.3:89420502-89420521	MS.gene073044:CDS	55.0%
	GGGACATTGGATCAAGGTGC+CGG	+	chr3.3:89420707-89420726	MS.gene073044:CDS	55.0%
	GGGGCCATAGATCTTCAGAG+TGG	+	chr3.3:89420206-89420225	MS.gene073044:CDS	55.0%
	TCTATGGCCCCTTGTTGAGC+AGG	-	chr3.3:89420197-89420216	None:intergenic	55.0%
	TGTGCCTCCTGCTCAACAAG+GGG	+	chr3.3:89420187-89420206	MS.gene073044:CDS	55.0%
!	GGGCAGCTTTTGCCTTTGGA+AGG	-	chr3.3:89420133-89420152	None:intergenic	55.0%
!	GTGAGGGCAGCTTTTGCCTT+TGG	-	chr3.3:89420137-89420156	None:intergenic	55.0%
	ATGGCCCCTTGTTGAGCAGG+AGG	-	chr3.3:89420194-89420213	None:intergenic	60.0%
	CAGCTGTTCTAGCAGCCGTG+AGG	-	chr3.3:89420154-89420173	None:intergenic	60.0%
	CAGGCAAGAGAACAGGGGAG+AGG	+	chr3.3:89419755-89419774	MS.gene073044:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	89419585	89420853	89419585	ID=MS.gene073044
chr3.3	mRNA	89419585	89420853	89419585	ID=MS.gene073044.t1;Parent=MS.gene073044
chr3.3	exon	89419585	89420853	89419585	ID=MS.gene073044.t1.exon1;Parent=MS.gene073044.t1
chr3.3	CDS	89419585	89420853	89419585	ID=cds.MS.gene073044.t1;Parent=MS.gene073044.t1

Gene Sequence

>MS.gene073044

ATGTCTACATCTTATCTTCCTGCCACAACGGATTCAATTGCTCAGGCATTGGAGGCTAAAGACCCTTCTGATGCGATATCCATTCTTTATCGTGTACTTGATGATCCATCTTCTTCACCAGAAGCTCTGCGTATGAAAGAGCAGGCCATCACAAATCTTACTGACCTTCTCAGGCAAGAGAACAGGGGAGAGGATCTGCGCAGCCTTCTCACTTCATTGAGGCCCTTTTTCTCCTTGATTCCTAAGGCAAAAACTGCAAAGATTGTAAGGGGAATAATTGACTCAGTTGCTAAAATACCAGGGACATCTGATCTACAGATTTCACTGTGTAAAGAAATGGTGCAGTGGACTCGTGCTGAAAAGCGTACTTTTCTGAGGCAACGAATTGAGGCAAGACTTGCAGCGCTTTTGATGGAAACTAAGGAGTATTCAGAAGCTTTGACTCTTCTTTCTGGGTTGGTCAAAGAGGTTAGGAGATTAGATGACAAACTTCTTCTTGTAGACATTGACTTGCTCGAAAGCAAACTGCACTTCTCATTAAGAAACCTTCCAAAGGCAAAAGCTGCCCTCACGGCTGCTAGAACAGCTGCAAATGCTATTTATGTGCCTCCTGCTCAACAAGGGGCCATAGATCTTCAGAGTGGAATACTTCATGCTGAGGAGAAGGACTACAAAACTGCATACAGCTATTTCTTTGAAGCCTTTGAGTCTTTCAATGCTCTTGAAGACCCTAAGGCTATTTTCAGCCTGAAATATATGTTGTTGTGTAAGATCATGGTGAATCAAGCTGATGACGTGGGTGGAATTATTTCTTCTAAGGCAGGATTGCAATATGTTGGGCCTGACTTGGATGCGATGAAAGCTGTTGCTGATGCTTATTCTAAGCGATCCCTTAAGTTTTTCGAAACTGCTTTGCAGGACTACAAGGCACAGTTGGGGGAAGACCCAATTGTTCACAGACACATTTCGTCCCTGTATGATACCCTTCTGGAGCAGAATCTTTGTAGGTTGATTGAGCCATTCTCAAGAGTTGAGATTGCACATATTGCTGAGCTTATCGAGCTTCCAATTGTTCACGTTGAGCGGAAGATGTCTCAGATGATTTTGGACAAGAAGTTTGCTGGGACATTGGATCAAGGTGCCGGATGCCTCGTTATATTCGATGATCCCAAGACTGATGCAATATACCCTGCAACTTTAGAGACCATTTCCAATGTTGGGAAAGTGGTTGACAGTCTTTATGTTAGGTCTGCCAAGATCATGGCATGA

Protein sequence

>MS.gene073044.t1

MSTSYLPATTDSIAQALEAKDPSDAISILYRVLDDPSSSPEALRMKEQAITNLTDLLRQENRGEDLRSLLTSLRPFFSLIPKAKTAKIVRGIIDSVAKIPGTSDLQISLCKEMVQWTRAEKRTFLRQRIEARLAALLMETKEYSEALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALEDPKAIFSLKYMLLCKIMVNQADDVGGIISSKAGLQYVGPDLDAMKAVADAYSKRSLKFFETALQDYKAQLGEDPIVHRHISSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPIVHVERKMSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLYVRSAKIMA