Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09087.t1 | PNX98566.1 | 88.4 | 561 | 50 | 3 | 20 | 565 | 16 | 576 | 4.50E-296 | 1026.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09087.t1 | A0A2K3N6C6 | 88.4 | 561 | 50 | 3 | 20 | 565 | 16 | 576 | 3.3e-296 | 1026.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene09087 | 0.828079 | 1.10E-54 | -1.69E-46 |
| MS.gene049227 | MS.gene09087 | 0.831996 | 1.22E-55 | -1.69E-46 |
| MS.gene049350 | MS.gene09087 | 0.822704 | 2.05E-53 | -1.69E-46 |
| MS.gene049418 | MS.gene09087 | 0.834526 | 2.85E-56 | -1.69E-46 |
| MS.gene049807 | MS.gene09087 | 0.85179 | 7.06E-61 | -1.69E-46 |
| MS.gene049887 | MS.gene09087 | 0.940047 | 4.54E-100 | -1.69E-46 |
| MS.gene050551 | MS.gene09087 | 0.811787 | 5.88E-51 | -1.69E-46 |
| MS.gene050630 | MS.gene09087 | 0.800649 | 1.31E-48 | -1.69E-46 |
| MS.gene050838 | MS.gene09087 | 0.824522 | 7.71E-54 | -1.69E-46 |
| MS.gene051029 | MS.gene09087 | 0.810373 | 1.19E-50 | -1.69E-46 |
| MS.gene051067 | MS.gene09087 | 0.812229 | 4.71E-51 | -1.69E-46 |
| MS.gene051102 | MS.gene09087 | 0.825476 | 4.59E-54 | -1.69E-46 |
| MS.gene051234 | MS.gene09087 | 0.802944 | 4.41E-49 | -1.69E-46 |
| MS.gene051388 | MS.gene09087 | 0.815332 | 9.76E-52 | -1.69E-46 |
| MS.gene05157 | MS.gene09087 | 0.808169 | 3.53E-50 | -1.69E-46 |
| MS.gene051700 | MS.gene09087 | 0.800393 | 1.47E-48 | -1.69E-46 |
| MS.gene051719 | MS.gene09087 | 0.807643 | 4.57E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene09087 | 0.822654 | 2.11E-53 | -1.69E-46 |
| MS.gene051885 | MS.gene09087 | 0.831807 | 1.35E-55 | -1.69E-46 |
| MS.gene052133 | MS.gene09087 | 0.826917 | 2.08E-54 | -1.69E-46 |
| MS.gene052307 | MS.gene09087 | 0.813583 | 2.38E-51 | -1.69E-46 |
| MS.gene052335 | MS.gene09087 | 0.813138 | 2.98E-51 | -1.69E-46 |
| MS.gene052397 | MS.gene09087 | 0.832896 | 7.28E-56 | -1.69E-46 |
| MS.gene052514 | MS.gene09087 | 0.800666 | 1.30E-48 | -1.69E-46 |
| MS.gene052516 | MS.gene09087 | 0.84579 | 3.26E-59 | -1.69E-46 |
| MS.gene052609 | MS.gene09087 | 0.832583 | 8.70E-56 | -1.69E-46 |
| MS.gene052665 | MS.gene09087 | 0.840211 | 9.97E-58 | -1.69E-46 |
| MS.gene052732 | MS.gene09087 | 0.891095 | 5.43E-74 | -1.69E-46 |
| MS.gene053122 | MS.gene09087 | 0.816413 | 5.60E-52 | -1.69E-46 |
| MS.gene053143 | MS.gene09087 | 0.850819 | 1.33E-60 | -1.69E-46 |
| MS.gene053144 | MS.gene09087 | 0.927047 | 2.02E-91 | -1.69E-46 |
| MS.gene053171 | MS.gene09087 | 0.813089 | 3.05E-51 | -1.69E-46 |
| MS.gene053174 | MS.gene09087 | 0.825325 | 4.98E-54 | -1.69E-46 |
| MS.gene053536 | MS.gene09087 | 0.817318 | 3.51E-52 | -1.69E-46 |
| MS.gene053538 | MS.gene09087 | 0.818699 | 1.71E-52 | -1.69E-46 |
| MS.gene053581 | MS.gene09087 | 0.860559 | 1.90E-63 | -1.69E-46 |
| MS.gene054550 | MS.gene09087 | 0.821154 | 4.69E-53 | -1.69E-46 |
| MS.gene054584 | MS.gene09087 | 0.917836 | 3.27E-86 | -1.69E-46 |
| MS.gene054824 | MS.gene09087 | 0.837943 | 3.86E-57 | -1.69E-46 |
| MS.gene055465 | MS.gene09087 | 0.863572 | 2.26E-64 | -1.69E-46 |
| MS.gene055466 | MS.gene09087 | 0.849084 | 4.06E-60 | -1.69E-46 |
| MS.gene055467 | MS.gene09087 | 0.811599 | 6.46E-51 | -1.69E-46 |
| MS.gene055468 | MS.gene09087 | 0.87278 | 2.45E-67 | -1.69E-46 |
| MS.gene055469 | MS.gene09087 | 0.867736 | 1.10E-65 | -1.69E-46 |
| MS.gene055513 | MS.gene09087 | 0.804724 | 1.88E-49 | -1.69E-46 |
| MS.gene055537 | MS.gene09087 | 0.876686 | 1.15E-68 | -1.69E-46 |
| MS.gene055580 | MS.gene09087 | -0.89054 | 8.99E-74 | -1.69E-46 |
| MS.gene055764 | MS.gene09087 | 0.852873 | 3.47E-61 | -1.69E-46 |
| MS.gene055891 | MS.gene09087 | 0.826878 | 2.13E-54 | -1.69E-46 |
| MS.gene055975 | MS.gene09087 | 0.817029 | 4.07E-52 | -1.69E-46 |
| MS.gene056043 | MS.gene09087 | -0.887886 | 9.62E-73 | -1.69E-46 |
| MS.gene056308 | MS.gene09087 | 0.846027 | 2.81E-59 | -1.69E-46 |
| MS.gene056398 | MS.gene09087 | 0.81682 | 4.54E-52 | -1.69E-46 |
| MS.gene056507 | MS.gene09087 | 0.828708 | 7.74E-55 | -1.69E-46 |
| MS.gene056553 | MS.gene09087 | 0.804394 | 2.21E-49 | -1.69E-46 |
| MS.gene057446 | MS.gene09087 | 0.801426 | 9.05E-49 | -1.69E-46 |
| MS.gene058087 | MS.gene09087 | 0.81705 | 4.03E-52 | -1.69E-46 |
| MS.gene058649 | MS.gene09087 | 0.809847 | 1.55E-50 | -1.69E-46 |
| MS.gene058668 | MS.gene09087 | 0.830288 | 3.20E-55 | -1.69E-46 |
| MS.gene05870 | MS.gene09087 | 0.808187 | 3.50E-50 | -1.69E-46 |
| MS.gene058720 | MS.gene09087 | 0.800138 | 1.66E-48 | -1.69E-46 |
| MS.gene058852 | MS.gene09087 | 0.837781 | 4.25E-57 | -1.69E-46 |
| MS.gene059424 | MS.gene09087 | 0.809168 | 2.16E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene09087 | 0.820773 | 5.75E-53 | -1.69E-46 |
| MS.gene060884 | MS.gene09087 | 0.824218 | 9.09E-54 | -1.69E-46 |
| MS.gene060886 | MS.gene09087 | 0.820899 | 5.37E-53 | -1.69E-46 |
| MS.gene060888 | MS.gene09087 | 0.803963 | 2.71E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene09087 | 0.84919 | 3.79E-60 | -1.69E-46 |
| MS.gene061100 | MS.gene09087 | 0.822184 | 2.71E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene09087 | MS.gene43740 | PPI |
| MS.gene09087 | MS.gene88718 | PPI |
| MS.gene09087 | MS.gene44844 | PPI |
| MS.gene09087 | MS.gene009940 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09087.t1 | MTR_8g085780 | 95.172 | 580 | 6 | 5 | 1 | 565 | 1 | 573 | 0.0 | 1126 |
| MS.gene09087.t1 | MTR_5g069410 | 46.208 | 567 | 267 | 5 | 18 | 565 | 14 | 561 | 0.0 | 541 |
| MS.gene09087.t1 | MTR_8g106395 | 22.837 | 289 | 178 | 9 | 287 | 551 | 91 | 358 | 1.21e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09087.t1 | AT4G08810 | 72.371 | 561 | 125 | 6 | 19 | 565 | 8 | 552 | 0.0 | 797 |
| MS.gene09087.t1 | AT2G04280 | 45.870 | 569 | 269 | 10 | 18 | 565 | 13 | 563 | 9.85e-178 | 514 |
| MS.gene09087.t1 | AT4G12700 | 44.214 | 579 | 280 | 10 | 6 | 565 | 2 | 556 | 2.94e-172 | 499 |
| MS.gene09087.t1 | AT3G56750 | 25.620 | 242 | 154 | 9 | 287 | 506 | 103 | 340 | 1.82e-11 | 66.6 |
| MS.gene09087.t1 | AT2G41150 | 23.967 | 242 | 159 | 8 | 287 | 506 | 103 | 341 | 4.11e-11 | 65.5 |
Find 138 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGGAGTTATGGCCTAATT+TGG | 0.171963 | 4.4:+14239458 | MS.gene09087:CDS |
| CCTTCTTCATCTTTATTACT+AGG | 0.181955 | 4.4:-14239045 | None:intergenic |
| TTTATCAAAGTAATTATAAT+AGG | 0.195025 | 4.4:-14239568 | None:intergenic |
| GCCCTTCTTGAGAAGCTTAA+AGG | 0.218876 | 4.4:+14239501 | MS.gene09087:CDS |
| CCGGTGAACGGTGCTGTTTC+CGG | 0.224068 | 4.4:+14238595 | MS.gene09087:CDS |
| CGCCTGAGCCAGAGAATTAT+TGG | 0.236292 | 4.4:+14239277 | MS.gene09087:CDS |
| TCATTTGCTTGATGATTATA+AGG | 0.272334 | 4.4:+14239611 | MS.gene09087:CDS |
| CATGCTGGTGGATTTCATTC+TGG | 0.279493 | 4.4:+14238733 | MS.gene09087:CDS |
| TTATTAGTTTGATTAGGTTT+TGG | 0.288695 | 4.4:-14238150 | None:intergenic |
| TAATGACACGATACCGAGTT+TGG | 0.304440 | 4.4:+14238849 | MS.gene09087:CDS |
| GCCAGAGAATTATTGGTATA+GGG | 0.325203 | 4.4:+14239284 | MS.gene09087:CDS |
| AACTGATGATTGTCGCTATA+AGG | 0.328283 | 4.4:+14238705 | MS.gene09087:CDS |
| TGAGTAACAACTTTCCTAAC+AGG | 0.348932 | 4.4:-14239192 | None:intergenic |
| TTGACAAAAGATTGCAAAGA+TGG | 0.358588 | 4.4:+14239780 | MS.gene09087:CDS |
| TCCTCCTGTGACGAGCTTCT+CGG | 0.367021 | 4.4:+14238478 | MS.gene09087:CDS |
| TGGGATCGGAGACTAATTTC+AGG | 0.373502 | 4.4:+14238869 | MS.gene09087:CDS |
| CCCTTCTTGAGAAGCTTAAA+GGG | 0.378859 | 4.4:+14239502 | MS.gene09087:CDS |
| TGGAGAGAAAGCTCAAAATA+AGG | 0.379163 | 4.4:+14239440 | MS.gene09087:CDS |
| AGCCAGAGAATTATTGGTAT+AGG | 0.384183 | 4.4:+14239283 | MS.gene09087:CDS |
| CCAATCCGTGGCCGTGGCAC+TGG | 0.386217 | 4.4:-14238775 | None:intergenic |
| TTTGAGGGATTGGAAGAGAT+GGG | 0.394414 | 4.4:+14239140 | MS.gene09087:CDS |
| GGAGGATGAAGGAGCGGTGG+CGG | 0.398576 | 4.4:-14238455 | None:intergenic |
| TAGGAAAGTTGTTACTCATA+AGG | 0.399578 | 4.4:+14239197 | MS.gene09087:CDS |
| GGAAAGCCTGTTGAGTTTGA+TGG | 0.399767 | 4.4:+14239687 | MS.gene09087:CDS |
| AACATTGTTACTGAGATTAG+TGG | 0.401648 | 4.4:+14239378 | MS.gene09087:CDS |
| CTTCTTCATCTTTATTACTA+GGG | 0.403674 | 4.4:-14239044 | None:intergenic |
| GCCACGGATTGGTGGTGGTA+AGG | 0.404830 | 4.4:+14238786 | MS.gene09087:CDS |
| AGTTGCTTATTAGTTTGATT+AGG | 0.405220 | 4.4:-14238156 | None:intergenic |
| AAGATAAGAGCACTGTCATT+TGG | 0.406687 | 4.4:+14239241 | MS.gene09087:CDS |
| TTATCAAAGTAATTATAATA+GGG | 0.406913 | 4.4:-14239567 | None:intergenic |
| TACTGAGATTAGTGGAAGAA+TGG | 0.408267 | 4.4:+14239386 | MS.gene09087:CDS |
| CGCTATAAGGTTATTCATGC+TGG | 0.431242 | 4.4:+14238718 | MS.gene09087:CDS |
| GGATGAAGGAGCGGTGGCGG+AGG | 0.435333 | 4.4:-14238452 | None:intergenic |
| GCGGGGTGGTGATTATTGTA+AGG | 0.437445 | 4.4:+14238915 | MS.gene09087:CDS |
| CCACGGATTGGTGGTGGTAA+GGG | 0.441656 | 4.4:+14238787 | MS.gene09087:CDS |
| GAAGTATCGGAATCCAAATT+AGG | 0.442142 | 4.4:-14239471 | None:intergenic |
| ATGTATCCATCAAACTCAAC+AGG | 0.446898 | 4.4:-14239693 | None:intergenic |
| CCGGTGATTGTGATGTTTCG+TGG | 0.458417 | 4.4:+14238614 | MS.gene09087:CDS |
| TATTGGTTCAGTTCTACTAC+TGG | 0.465250 | 4.4:-14238125 | None:intergenic |
| AGATTAGTGGAAGAATGGAT+TGG | 0.466631 | 4.4:+14239391 | MS.gene09087:CDS |
| ACCCTATACCAATAATTCTC+TGG | 0.468769 | 4.4:-14239285 | None:intergenic |
| AAGCTCAAAATAAGGAGTTA+TGG | 0.469344 | 4.4:+14239448 | MS.gene09087:CDS |
| GGGGTGGAGTCGGCGGGAGA+AGG | 0.470261 | 4.4:-14238379 | None:intergenic |
| AAGGGCATCCGGCGAAGTAT+CGG | 0.470739 | 4.4:-14239484 | None:intergenic |
| TACCAATAATTCTCTGGCTC+AGG | 0.472091 | 4.4:-14239279 | None:intergenic |
| AAGGGTTGGTTCAACCTTGG+AGG | 0.472963 | 4.4:+14239520 | MS.gene09087:CDS |
| AATGACACGATACCGAGTTT+GGG | 0.473052 | 4.4:+14238850 | MS.gene09087:CDS |
| AGCTTCTCAAGAAGGGCATC+CGG | 0.474618 | 4.4:-14239495 | None:intergenic |
| CCCTTTAAGCTTCTCAAGAA+GGG | 0.478566 | 4.4:-14239502 | None:intergenic |
| GGAATTAGCGATATTCTCTT+CGG | 0.479669 | 4.4:-14238431 | None:intergenic |
| TAAACTGAGAGCGAACTTCA+AGG | 0.482035 | 4.4:+14239587 | MS.gene09087:CDS |
| CCACCACCAATCCGTGGCCG+TGG | 0.482081 | 4.4:-14238781 | None:intergenic |
| ACCCTTTAAGCTTCTCAAGA+AGG | 0.482908 | 4.4:-14239503 | None:intergenic |
| GATTAGTGGAAGAATGGATT+GGG | 0.486657 | 4.4:+14239392 | MS.gene09087:CDS |
| CGGAGACTAATTTCAGGAAT+GGG | 0.487253 | 4.4:+14238875 | MS.gene09087:CDS |
| ATTACAGCCTCCGTGACAGC+GGG | 0.487918 | 4.4:-14238400 | None:intergenic |
| CCTAGTAATAAAGATGAAGA+AGG | 0.488499 | 4.4:+14239045 | MS.gene09087:CDS |
| AAGCTCGTCACAGGAGGAGG+AGG | 0.492759 | 4.4:-14238473 | None:intergenic |
| AGTAGTAGAACTGAACCAAT+AGG | 0.492977 | 4.4:+14238127 | MS.gene09087:CDS |
| GTGCCACGGCCACGGATTGG+TGG | 0.497501 | 4.4:+14238778 | MS.gene09087:CDS |
| GAAGGATGAGGAGAGTCTTG+TGG | 0.502462 | 4.4:-14238361 | None:intergenic |
| TCACAGGAGGAGGAGGATGA+AGG | 0.506105 | 4.4:-14238466 | None:intergenic |
| TTATCTTTCTGAAGTTGCAT+AGG | 0.506393 | 4.4:-14239225 | None:intergenic |
| GAGAAGCTCGTCACAGGAGG+AGG | 0.508733 | 4.4:-14238476 | None:intergenic |
| GAAGTATTTGTATTATTCGC+GGG | 0.508790 | 4.4:+14238897 | MS.gene09087:CDS |
| CACGGATTGGTGGTGGTAAG+GGG | 0.509278 | 4.4:+14238788 | MS.gene09087:CDS |
| GAGTCGGCGGGAGAAGGATG+AGG | 0.510791 | 4.4:-14238373 | None:intergenic |
| TCGGAGACTAATTTCAGGAA+TGG | 0.517619 | 4.4:+14238874 | MS.gene09087:CDS |
| TTCGGGTTGAGTGAAGAGAT+TGG | 0.519919 | 4.4:-14238278 | None:intergenic |
| CGGGGTGGTGATTATTGTAA+GGG | 0.526101 | 4.4:+14238916 | MS.gene09087:CDS |
| CCAGTGCCACGGCCACGGAT+TGG | 0.526126 | 4.4:+14238775 | MS.gene09087:CDS |
| TCTTGAGAAGCTTAAAGGGT+TGG | 0.526288 | 4.4:+14239506 | MS.gene09087:CDS |
| GACACCTCCGTTATCAAAAC+CGG | 0.528316 | 4.4:+14238319 | MS.gene09087:CDS |
| GTAATAAGAGAGAGAAATCA+TGG | 0.534790 | 4.4:+14238644 | MS.gene09087:CDS |
| GAAATCCAGTGCCACGGCCA+CGG | 0.538894 | 4.4:+14238770 | MS.gene09087:CDS |
| TTAAAGGGTTGGTTCAACCT+TGG | 0.539372 | 4.4:+14239517 | MS.gene09087:CDS |
| GATGCGGTTCATGTGGTTCG+TGG | 0.542624 | 4.4:+14239420 | MS.gene09087:CDS |
| GTGAAGAGATTGGTGAGAGC+TGG | 0.543355 | 4.4:-14238268 | None:intergenic |
| GGAAGTATTTGTATTATTCG+CGG | 0.544116 | 4.4:+14238896 | MS.gene09087:CDS |
| CAAAGTATATTCAGAGACCT+TGG | 0.544755 | 4.4:+14239325 | MS.gene09087:CDS |
| GAAGATTGAAGCCATGGATC+GGG | 0.546279 | 4.4:-14238244 | None:intergenic |
| TAATAAAGATGAAGAAGGGA+AGG | 0.546402 | 4.4:+14239050 | MS.gene09087:CDS |
| GCTGGTGAAGATTGAAGCCA+TGG | 0.546403 | 4.4:-14238250 | None:intergenic |
| CCACGGCCACGGATTGGTGG+TGG | 0.548013 | 4.4:+14238781 | MS.gene09087:CDS |
| CCACGAAACATCACAATCAC+CGG | 0.554041 | 4.4:-14238614 | None:intergenic |
| CCGGAAACAGCACCGTTCAC+CGG | 0.554411 | 4.4:-14238595 | None:intergenic |
| CTTACCAACCACCCGATCCA+TGG | 0.556101 | 4.4:+14238233 | MS.gene09087:CDS |
| AGAGACCTTGGCATGCGTTG+TGG | 0.558542 | 4.4:+14239337 | MS.gene09087:CDS |
| AGAGGTTGCTTCTATTGTTG+AGG | 0.559157 | 4.4:+14239107 | MS.gene09087:CDS |
| GTTGCTTCTATTGTTGAGGA+AGG | 0.559966 | 4.4:+14239111 | MS.gene09087:CDS |
| GAAGCCATGGATCGGGTGGT+TGG | 0.562457 | 4.4:-14238237 | None:intergenic |
| ATGGATTTGAGTGTCTGTCT+AGG | 0.566597 | 4.4:+14239009 | MS.gene09087:CDS |
| GGAGGAGGATGAAGGAGCGG+TGG | 0.569086 | 4.4:-14238458 | None:intergenic |
| GATTTCCACAACGCATGCCA+AGG | 0.569572 | 4.4:-14239342 | None:intergenic |
| TTCATTCTGGAGTAAATGCA+AGG | 0.575495 | 4.4:+14238746 | MS.gene09087:CDS |
| CGTTCCGAGAAGCTCGTCAC+AGG | 0.576053 | 4.4:-14238482 | None:intergenic |
| TTTGGATTCCGATACTTCGC+CGG | 0.577771 | 4.4:+14239476 | MS.gene09087:CDS |
| ATAAGAGCACTGTCATTTGG+AGG | 0.583632 | 4.4:+14239244 | MS.gene09087:CDS |
| TATAAGGTTATTCATGCTGG+TGG | 0.583826 | 4.4:+14238721 | MS.gene09087:CDS |
| TGATGATTATAAGGAACTGT+GGG | 0.584010 | 4.4:+14239620 | MS.gene09087:CDS |
| AGAAAGAGTGAGGTCTTCAC+CGG | 0.584550 | 4.4:-14238338 | None:intergenic |
| TATTGGTATAGGGTTTGTGA+AGG | 0.587545 | 4.4:+14239294 | MS.gene09087:CDS |
| CACGATACCGAGTTTGGGAT+CGG | 0.588112 | 4.4:+14238855 | MS.gene09087:CDS |
| CCCTTACCACCACCAATCCG+TGG | 0.590155 | 4.4:-14238787 | None:intergenic |
| GGAGGTGTCGATGTGGAAAG+TGG | 0.590783 | 4.4:-14238305 | None:intergenic |
| GAGTATCAAACTCCGGTGAA+CGG | 0.591958 | 4.4:+14238583 | MS.gene09087:CDS |
| TCCGAGAAGCTCGTCACAGG+AGG | 0.600268 | 4.4:-14238479 | None:intergenic |
| GCAATATACAAATTCCTCCA+AGG | 0.607602 | 4.4:-14239534 | None:intergenic |
| TTAGTCTCCGATCCCAAACT+CGG | 0.610596 | 4.4:-14238862 | None:intergenic |
| TGAAGATTGAAGCCATGGAT+CGG | 0.610938 | 4.4:-14238245 | None:intergenic |
| CTAGTAATAAAGATGAAGAA+GGG | 0.614175 | 4.4:+14239046 | MS.gene09087:CDS |
| GAAACTAGTCTTCTTAACAA+TGG | 0.615471 | 4.4:+14239666 | MS.gene09087:CDS |
| AAGTATTTGTATTATTCGCG+GGG | 0.616803 | 4.4:+14238898 | MS.gene09087:CDS |
| TACAGCCTCCGTGACAGCGG+GGG | 0.618994 | 4.4:-14238398 | None:intergenic |
| TTTCCACACGAGTCTTTCCA+CGG | 0.619276 | 4.4:-14239746 | None:intergenic |
| TATTTGTATTATTCGCGGGG+TGG | 0.628601 | 4.4:+14238901 | MS.gene09087:CDS |
| GGAGGAGGAGGATGAAGGAG+CGG | 0.629139 | 4.4:-14238461 | None:intergenic |
| CAAGGAGAAATCCAGTGCCA+CGG | 0.633555 | 4.4:+14238764 | MS.gene09087:CDS |
| GATTACAGCCTCCGTGACAG+CGG | 0.634698 | 4.4:-14238401 | None:intergenic |
| TTGATGATTATAAGGAACTG+TGG | 0.636411 | 4.4:+14239619 | MS.gene09087:CDS |
| GAGAGTTGCGGTGGATACAG+AGG | 0.638410 | 4.4:+14239716 | MS.gene09087:CDS |
| AGTCTTGTGGAGAAAGAGTG+AGG | 0.643063 | 4.4:-14238348 | None:intergenic |
| TTGGTAAGTGATGGCAATGA+CGG | 0.657577 | 4.4:-14238218 | None:intergenic |
| ATCGGGTGGTTGGTAAGTGA+TGG | 0.661949 | 4.4:-14238227 | None:intergenic |
| TGATAACGGAGGTGTCGATG+TGG | 0.681342 | 4.4:-14238312 | None:intergenic |
| TTACCGTGGAAAGACTCGTG+TGG | 0.682838 | 4.4:+14239743 | MS.gene09087:CDS |
| TGGATACATGAGAGTTGCGG+TGG | 0.686702 | 4.4:+14239707 | MS.gene09087:CDS |
| TTACAGCCTCCGTGACAGCG+GGG | 0.689498 | 4.4:-14238399 | None:intergenic |
| GTAAGGGGAAAACTTTGCCG+CGG | 0.691348 | 4.4:+14238803 | MS.gene09087:CDS |
| ATGATTATAAGGAACTGTGG+GGG | 0.695717 | 4.4:+14239622 | MS.gene09087:CDS |
| GATGATTATAAGGAACTGTG+GGG | 0.695989 | 4.4:+14239621 | MS.gene09087:CDS |
| GATTGAAGCCATGGATCGGG+TGG | 0.697651 | 4.4:-14238241 | None:intergenic |
| GTGATTGTGATGTTTCGTGG+AGG | 0.699591 | 4.4:+14238617 | MS.gene09087:CDS |
| TCATCACGATTCGTTATCCG+CGG | 0.702312 | 4.4:-14238820 | None:intergenic |
| TGATGGATACATGAGAGTTG+CGG | 0.703444 | 4.4:+14239704 | MS.gene09087:CDS |
| TGAATAGCAATAAGAACACG+AGG | 0.704492 | 4.4:-14238520 | None:intergenic |
| ATGCGTTGTGGAAATCAAAG+AGG | 0.713803 | 4.4:+14239349 | MS.gene09087:CDS |
| ATAAGAGAGAGAAATCATGG+CGG | 0.828753 | 4.4:+14238647 | MS.gene09087:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATCAAAGTAATTATAATA+GGG | - | chr4.4:14239570-14239589 | None:intergenic | 10.0% |
| !! | TTTATCAAAGTAATTATAAT+AGG | - | chr4.4:14239571-14239590 | None:intergenic | 10.0% |
| !!! | TTATTAGTTTGATTAGGTTT+TGG | - | chr4.4:14238153-14238172 | None:intergenic | 20.0% |
| !!! | TTTGAATAGAACTTTTGTTA+TGG | + | chr4.4:14238990-14239009 | MS.gene09087:CDS | 20.0% |
| ! | CTAGTAATAAAGATGAAGAA+GGG | + | chr4.4:14239046-14239065 | MS.gene09087:CDS | 25.0% |
| ! | CTTCTTCATCTTTATTACTA+GGG | - | chr4.4:14239047-14239066 | None:intergenic | 25.0% |
| !! | AGTTGCTTATTAGTTTGATT+AGG | - | chr4.4:14238159-14238178 | None:intergenic | 25.0% |
| !! | TCATTTGCTTGATGATTATA+AGG | + | chr4.4:14239611-14239630 | MS.gene09087:CDS | 25.0% |
| !!! | TTTATGTGGAGTTTTTTATG+TGG | + | chr4.4:14238949-14238968 | MS.gene09087:intron | 25.0% |
| AACATTGTTACTGAGATTAG+TGG | + | chr4.4:14239378-14239397 | MS.gene09087:CDS | 30.0% | |
| AAGCTCAAAATAAGGAGTTA+TGG | + | chr4.4:14239448-14239467 | MS.gene09087:CDS | 30.0% | |
| AAGTATTTGTATTATTCGCG+GGG | + | chr4.4:14238898-14238917 | MS.gene09087:CDS | 30.0% | |
| CCTAGTAATAAAGATGAAGA+AGG | + | chr4.4:14239045-14239064 | MS.gene09087:CDS | 30.0% | |
| CCTTCTTCATCTTTATTACT+AGG | - | chr4.4:14239048-14239067 | None:intergenic | 30.0% | |
| GACTCATCTTAAGAAAAAGA+AGG | + | chr4.4:14239167-14239186 | MS.gene09087:CDS | 30.0% | |
| GTAATAAGAGAGAGAAATCA+TGG | + | chr4.4:14238644-14238663 | MS.gene09087:CDS | 30.0% | |
| TAATAAAGATGAAGAAGGGA+AGG | + | chr4.4:14239050-14239069 | MS.gene09087:CDS | 30.0% | |
| TAGGAAAGTTGTTACTCATA+AGG | + | chr4.4:14239197-14239216 | MS.gene09087:CDS | 30.0% | |
| TGATGATTATAAGGAACTGT+GGG | + | chr4.4:14239620-14239639 | MS.gene09087:CDS | 30.0% | |
| TTGACAAAAGATTGCAAAGA+TGG | + | chr4.4:14239780-14239799 | MS.gene09087:CDS | 30.0% | |
| ! | AGGGTATGAATCATTTTATG+TGG | + | chr4.4:14238935-14238954 | MS.gene09087:intron | 30.0% |
| ! | GAAGTATTTGTATTATTCGC+GGG | + | chr4.4:14238897-14238916 | MS.gene09087:CDS | 30.0% |
| ! | TGATTTTGAGCATTTGAAAG+AGG | + | chr4.4:14239089-14239108 | MS.gene09087:CDS | 30.0% |
| ! | TTGATGATTATAAGGAACTG+TGG | + | chr4.4:14239619-14239638 | MS.gene09087:CDS | 30.0% |
| !! | GAAACTAGTCTTCTTAACAA+TGG | + | chr4.4:14239666-14239685 | MS.gene09087:CDS | 30.0% |
| !! | GGAAGTATTTGTATTATTCG+CGG | + | chr4.4:14238896-14238915 | MS.gene09087:CDS | 30.0% |
| !! | TTATCTTTCTGAAGTTGCAT+AGG | - | chr4.4:14239228-14239247 | None:intergenic | 30.0% |
| !!! | TGGAGTTTTTTATGTGGTTT+AGG | + | chr4.4:14238955-14238974 | MS.gene09087:intron | 30.0% |
| AACTGATGATTGTCGCTATA+AGG | + | chr4.4:14238705-14238724 | MS.gene09087:CDS | 35.0% | |
| ACCCTATACCAATAATTCTC+TGG | - | chr4.4:14239288-14239307 | None:intergenic | 35.0% | |
| AGAAAAAGAAGGTTCCTGTT+AGG | + | chr4.4:14239178-14239197 | MS.gene09087:CDS | 35.0% | |
| AGATTAGTGGAAGAATGGAT+TGG | + | chr4.4:14239391-14239410 | MS.gene09087:CDS | 35.0% | |
| AGCCAGAGAATTATTGGTAT+AGG | + | chr4.4:14239283-14239302 | MS.gene09087:CDS | 35.0% | |
| AGTAGTAGAACTGAACCAAT+AGG | + | chr4.4:14238127-14238146 | MS.gene09087:CDS | 35.0% | |
| ATAAGAGAGAGAAATCATGG+CGG | + | chr4.4:14238647-14238666 | MS.gene09087:CDS | 35.0% | |
| ATGATTATAAGGAACTGTGG+GGG | + | chr4.4:14239622-14239641 | MS.gene09087:CDS | 35.0% | |
| ATGTATCCATCAAACTCAAC+AGG | - | chr4.4:14239696-14239715 | None:intergenic | 35.0% | |
| CAAAGTATATTCAGAGACCT+TGG | + | chr4.4:14239325-14239344 | MS.gene09087:CDS | 35.0% | |
| GATGATTATAAGGAACTGTG+GGG | + | chr4.4:14239621-14239640 | MS.gene09087:CDS | 35.0% | |
| GCAATATACAAATTCCTCCA+AGG | - | chr4.4:14239537-14239556 | None:intergenic | 35.0% | |
| GCCAGAGAATTATTGGTATA+GGG | + | chr4.4:14239284-14239303 | MS.gene09087:CDS | 35.0% | |
| GGAATTAGCGATATTCTCTT+CGG | - | chr4.4:14238434-14238453 | None:intergenic | 35.0% | |
| TAAGGAGTTATGGCCTAATT+TGG | + | chr4.4:14239458-14239477 | MS.gene09087:CDS | 35.0% | |
| TACTGAGATTAGTGGAAGAA+TGG | + | chr4.4:14239386-14239405 | MS.gene09087:CDS | 35.0% | |
| TATAAGGTTATTCATGCTGG+TGG | + | chr4.4:14238721-14238740 | MS.gene09087:CDS | 35.0% | |
| TATTGGTATAGGGTTTGTGA+AGG | + | chr4.4:14239294-14239313 | MS.gene09087:CDS | 35.0% | |
| TGAATAGCAATAAGAACACG+AGG | - | chr4.4:14238523-14238542 | None:intergenic | 35.0% | |
| TGAGTAACAACTTTCCTAAC+AGG | - | chr4.4:14239195-14239214 | None:intergenic | 35.0% | |
| TGGAGAGAAAGCTCAAAATA+AGG | + | chr4.4:14239440-14239459 | MS.gene09087:CDS | 35.0% | |
| ! | ATGAAGAAGGGAAGGATTTT+AGG | + | chr4.4:14239058-14239077 | MS.gene09087:CDS | 35.0% |
| ! | GATTAGTGGAAGAATGGATT+GGG | + | chr4.4:14239392-14239411 | MS.gene09087:CDS | 35.0% |
| !! | AAGATAAGAGCACTGTCATT+TGG | + | chr4.4:14239241-14239260 | MS.gene09087:CDS | 35.0% |
| !! | GAAGTATCGGAATCCAAATT+AGG | - | chr4.4:14239474-14239493 | None:intergenic | 35.0% |
| !! | TATTGGTTCAGTTCTACTAC+TGG | - | chr4.4:14238128-14238147 | None:intergenic | 35.0% |
| !! | TTCATTCTGGAGTAAATGCA+AGG | + | chr4.4:14238746-14238765 | MS.gene09087:CDS | 35.0% |
| !! | TTGATTAGGTTTTGGCCTAT+TGG | - | chr4.4:14238145-14238164 | None:intergenic | 35.0% |
| !!! | AATGGATTGGGATTTTGATG+CGG | + | chr4.4:14239404-14239423 | MS.gene09087:CDS | 35.0% |
| !!! | GTTTTTCGAGTATCAAACTC+CGG | + | chr4.4:14238576-14238595 | MS.gene09087:CDS | 35.0% |
| AATGACACGATACCGAGTTT+GGG | + | chr4.4:14238850-14238869 | MS.gene09087:CDS | 40.0% | |
| ACCCTTTAAGCTTCTCAAGA+AGG | - | chr4.4:14239506-14239525 | None:intergenic | 40.0% | |
| AGAGGTTGCTTCTATTGTTG+AGG | + | chr4.4:14239107-14239126 | MS.gene09087:CDS | 40.0% | |
| ATGCGTTGTGGAAATCAAAG+AGG | + | chr4.4:14239349-14239368 | MS.gene09087:CDS | 40.0% | |
| ATGGATTTGAGTGTCTGTCT+AGG | + | chr4.4:14239009-14239028 | MS.gene09087:CDS | 40.0% | |
| CCCTTCTTGAGAAGCTTAAA+GGG | + | chr4.4:14239502-14239521 | MS.gene09087:CDS | 40.0% | |
| CCCTTTAAGCTTCTCAAGAA+GGG | - | chr4.4:14239505-14239524 | None:intergenic | 40.0% | |
| CGCTATAAGGTTATTCATGC+TGG | + | chr4.4:14238718-14238737 | MS.gene09087:CDS | 40.0% | |
| CGGAGACTAATTTCAGGAAT+GGG | + | chr4.4:14238875-14238894 | MS.gene09087:CDS | 40.0% | |
| GTTGCTTCTATTGTTGAGGA+AGG | + | chr4.4:14239111-14239130 | MS.gene09087:CDS | 40.0% | |
| TAAACTGAGAGCGAACTTCA+AGG | + | chr4.4:14239587-14239606 | MS.gene09087:CDS | 40.0% | |
| TAATGACACGATACCGAGTT+TGG | + | chr4.4:14238849-14238868 | MS.gene09087:CDS | 40.0% | |
| TATTTGTATTATTCGCGGGG+TGG | + | chr4.4:14238901-14238920 | MS.gene09087:CDS | 40.0% | |
| TCGGAGACTAATTTCAGGAA+TGG | + | chr4.4:14238874-14238893 | MS.gene09087:CDS | 40.0% | |
| TCTTGAGAAGCTTAAAGGGT+TGG | + | chr4.4:14239506-14239525 | MS.gene09087:CDS | 40.0% | |
| TGAAGATTGAAGCCATGGAT+CGG | - | chr4.4:14238248-14238267 | None:intergenic | 40.0% | |
| TTGGTAAGTGATGGCAATGA+CGG | - | chr4.4:14238221-14238240 | None:intergenic | 40.0% | |
| TTTGAGGGATTGGAAGAGAT+GGG | + | chr4.4:14239140-14239159 | MS.gene09087:CDS | 40.0% | |
| ! | TACCAATAATTCTCTGGCTC+AGG | - | chr4.4:14239282-14239301 | None:intergenic | 40.0% |
| ! | TGAGGAAGGTGAGTTTTTGA+GGG | + | chr4.4:14239125-14239144 | MS.gene09087:CDS | 40.0% |
| ! | TGATGGATACATGAGAGTTG+CGG | + | chr4.4:14239704-14239723 | MS.gene09087:CDS | 40.0% |
| ! | TTGAGGAAGGTGAGTTTTTG+AGG | + | chr4.4:14239124-14239143 | MS.gene09087:CDS | 40.0% |
| !! | AAGGTGAGTTTTTGAGGGAT+TGG | + | chr4.4:14239130-14239149 | MS.gene09087:CDS | 40.0% |
| !! | ATAAGAGCACTGTCATTTGG+AGG | + | chr4.4:14239244-14239263 | MS.gene09087:CDS | 40.0% |
| !! | TTAAAGGGTTGGTTCAACCT+TGG | + | chr4.4:14239517-14239536 | MS.gene09087:CDS | 40.0% |
| !! | TTTTGAGGGATTGGAAGAGA+TGG | + | chr4.4:14239139-14239158 | MS.gene09087:CDS | 40.0% |
| !!! | GTCTTCACCGGTTTTGATAA+CGG | - | chr4.4:14238329-14238348 | None:intergenic | 40.0% |
| AGAAAGAGTGAGGTCTTCAC+CGG | - | chr4.4:14238341-14238360 | None:intergenic | 45.0% | |
| CCACGAAACATCACAATCAC+CGG | - | chr4.4:14238617-14238636 | None:intergenic | 45.0% | |
| CGGGGTGGTGATTATTGTAA+GGG | + | chr4.4:14238916-14238935 | MS.gene09087:CDS | 45.0% | |
| GAAGATTGAAGCCATGGATC+GGG | - | chr4.4:14238247-14238266 | None:intergenic | 45.0% | |
| GACACCTCCGTTATCAAAAC+CGG | + | chr4.4:14238319-14238338 | MS.gene09087:CDS | 45.0% | |
| GAGTATCAAACTCCGGTGAA+CGG | + | chr4.4:14238583-14238602 | MS.gene09087:CDS | 45.0% | |
| GCCCTTCTTGAGAAGCTTAA+AGG | + | chr4.4:14239501-14239520 | MS.gene09087:CDS | 45.0% | |
| GGAAAGCCTGTTGAGTTTGA+TGG | + | chr4.4:14239687-14239706 | MS.gene09087:CDS | 45.0% | |
| GTGATTGTGATGTTTCGTGG+AGG | + | chr4.4:14238617-14238636 | MS.gene09087:CDS | 45.0% | |
| TCATCACGATTCGTTATCCG+CGG | - | chr4.4:14238823-14238842 | None:intergenic | 45.0% | |
| TGGGATCGGAGACTAATTTC+AGG | + | chr4.4:14238869-14238888 | MS.gene09087:CDS | 45.0% | |
| TTAGTCTCCGATCCCAAACT+CGG | - | chr4.4:14238865-14238884 | None:intergenic | 45.0% | |
| TTTCCACACGAGTCTTTCCA+CGG | - | chr4.4:14239749-14239768 | None:intergenic | 45.0% | |
| TTTGGATTCCGATACTTCGC+CGG | + | chr4.4:14239476-14239495 | MS.gene09087:CDS | 45.0% | |
| ! | AGTCTTGTGGAGAAAGAGTG+AGG | - | chr4.4:14238351-14238370 | None:intergenic | 45.0% |
| ! | ATGTGGAAAGTGGCGTTTTC+GGG | - | chr4.4:14238298-14238317 | None:intergenic | 45.0% |
| ! | GATACAGAGGTCTTTTACCG+TGG | + | chr4.4:14239729-14239748 | MS.gene09087:CDS | 45.0% |
| ! | GATGTGGAAAGTGGCGTTTT+CGG | - | chr4.4:14238299-14238318 | None:intergenic | 45.0% |
| !! | CATGCTGGTGGATTTCATTC+TGG | + | chr4.4:14238733-14238752 | MS.gene09087:CDS | 45.0% |
| !! | GGATTTTGATGCGGTTCATG+TGG | + | chr4.4:14239413-14239432 | MS.gene09087:CDS | 45.0% |
| !! | TTCGGGTTGAGTGAAGAGAT+TGG | - | chr4.4:14238281-14238300 | None:intergenic | 45.0% |
| !!! | TTCACCGGTTTTGATAACGG+AGG | - | chr4.4:14238326-14238345 | None:intergenic | 45.0% |
| CAAGGAGAAATCCAGTGCCA+CGG | + | chr4.4:14238764-14238783 | MS.gene09087:CDS | 50.0% | |
| CCGGTGATTGTGATGTTTCG+TGG | + | chr4.4:14238614-14238633 | MS.gene09087:CDS | 50.0% | |
| CGCCTGAGCCAGAGAATTAT+TGG | + | chr4.4:14239277-14239296 | MS.gene09087:CDS | 50.0% | |
| GAAGGATGAGGAGAGTCTTG+TGG | - | chr4.4:14238364-14238383 | None:intergenic | 50.0% | |
| GATTTCCACAACGCATGCCA+AGG | - | chr4.4:14239345-14239364 | None:intergenic | 50.0% | |
| GCGGGGTGGTGATTATTGTA+AGG | + | chr4.4:14238915-14238934 | MS.gene09087:CDS | 50.0% | |
| GCTGGTGAAGATTGAAGCCA+TGG | - | chr4.4:14238253-14238272 | None:intergenic | 50.0% | |
| GTAAGGGGAAAACTTTGCCG+CGG | + | chr4.4:14238803-14238822 | MS.gene09087:CDS | 50.0% | |
| GTGAAGAGATTGGTGAGAGC+TGG | - | chr4.4:14238271-14238290 | None:intergenic | 50.0% | |
| TGGATACATGAGAGTTGCGG+TGG | + | chr4.4:14239707-14239726 | MS.gene09087:CDS | 50.0% | |
| TGTGGGGGAATTCGAGTGAA+TGG | + | chr4.4:14239637-14239656 | MS.gene09087:CDS | 50.0% | |
| TTACCGTGGAAAGACTCGTG+TGG | + | chr4.4:14239743-14239762 | MS.gene09087:CDS | 50.0% | |
| ! | CACGATACCGAGTTTGGGAT+CGG | + | chr4.4:14238855-14238874 | MS.gene09087:CDS | 50.0% |
| !! | AAGGGTTGGTTCAACCTTGG+AGG | + | chr4.4:14239520-14239539 | MS.gene09087:CDS | 50.0% |
| !! | AGCTTCTCAAGAAGGGCATC+CGG | - | chr4.4:14239498-14239517 | None:intergenic | 50.0% |
| !! | ATCGGGTGGTTGGTAAGTGA+TGG | - | chr4.4:14238230-14238249 | None:intergenic | 50.0% |
| !! | TGATAACGGAGGTGTCGATG+TGG | - | chr4.4:14238315-14238334 | None:intergenic | 50.0% |
| AGAGACCTTGGCATGCGTTG+TGG | + | chr4.4:14239337-14239356 | MS.gene09087:CDS | 55.0% | |
| ATTACAGCCTCCGTGACAGC+GGG | - | chr4.4:14238403-14238422 | None:intergenic | 55.0% | |
| CTTACCAACCACCCGATCCA+TGG | + | chr4.4:14238233-14238252 | MS.gene09087:CDS | 55.0% | |
| GAGAGTTGCGGTGGATACAG+AGG | + | chr4.4:14239716-14239735 | MS.gene09087:CDS | 55.0% | |
| GATGCGGTTCATGTGGTTCG+TGG | + | chr4.4:14239420-14239439 | MS.gene09087:CDS | 55.0% | |
| GATTACAGCCTCCGTGACAG+CGG | - | chr4.4:14238404-14238423 | None:intergenic | 55.0% | |
| GATTGAAGCCATGGATCGGG+TGG | - | chr4.4:14238244-14238263 | None:intergenic | 55.0% | |
| TCACAGGAGGAGGAGGATGA+AGG | - | chr4.4:14238469-14238488 | None:intergenic | 55.0% | |
| TCCTCCTGTGACGAGCTTCT+CGG | + | chr4.4:14238478-14238497 | MS.gene09087:CDS | 55.0% | |
| !! | AAGGGCATCCGGCGAAGTAT+CGG | - | chr4.4:14239487-14239506 | None:intergenic | 55.0% |
| !! | CACGGATTGGTGGTGGTAAG+GGG | + | chr4.4:14238788-14238807 | MS.gene09087:CDS | 55.0% |
| !! | CCACGGATTGGTGGTGGTAA+GGG | + | chr4.4:14238787-14238806 | MS.gene09087:CDS | 55.0% |
| !! | GGAGGTGTCGATGTGGAAAG+TGG | - | chr4.4:14238308-14238327 | None:intergenic | 55.0% |
| AAGCTCGTCACAGGAGGAGG+AGG | - | chr4.4:14238476-14238495 | None:intergenic | 60.0% | |
| CCCTTACCACCACCAATCCG+TGG | - | chr4.4:14238790-14238809 | None:intergenic | 60.0% | |
| CCGGAAACAGCACCGTTCAC+CGG | - | chr4.4:14238598-14238617 | None:intergenic | 60.0% | |
| CGTTCCGAGAAGCTCGTCAC+AGG | - | chr4.4:14238485-14238504 | None:intergenic | 60.0% | |
| GAAATCCAGTGCCACGGCCA+CGG | + | chr4.4:14238770-14238789 | MS.gene09087:CDS | 60.0% | |
| GAAGCCATGGATCGGGTGGT+TGG | - | chr4.4:14238240-14238259 | None:intergenic | 60.0% | |
| GAGAAGCTCGTCACAGGAGG+AGG | - | chr4.4:14238479-14238498 | None:intergenic | 60.0% | |
| GGAGGAGGAGGATGAAGGAG+CGG | - | chr4.4:14238464-14238483 | None:intergenic | 60.0% | |
| TCCGAGAAGCTCGTCACAGG+AGG | - | chr4.4:14238482-14238501 | None:intergenic | 60.0% | |
| TTACAGCCTCCGTGACAGCG+GGG | - | chr4.4:14238402-14238421 | None:intergenic | 60.0% | |
| !! | CCGGTGAACGGTGCTGTTTC+CGG | + | chr4.4:14238595-14238614 | MS.gene09087:CDS | 60.0% |
| !! | GCCACGGATTGGTGGTGGTA+AGG | + | chr4.4:14238786-14238805 | MS.gene09087:CDS | 60.0% |
| GAGTCGGCGGGAGAAGGATG+AGG | - | chr4.4:14238376-14238395 | None:intergenic | 65.0% | |
| GGAGGAGGATGAAGGAGCGG+TGG | - | chr4.4:14238461-14238480 | None:intergenic | 65.0% | |
| GGAGGATGAAGGAGCGGTGG+CGG | - | chr4.4:14238458-14238477 | None:intergenic | 65.0% | |
| TACAGCCTCCGTGACAGCGG+GGG | - | chr4.4:14238401-14238420 | None:intergenic | 65.0% | |
| CCAATCCGTGGCCGTGGCAC+TGG | - | chr4.4:14238778-14238797 | None:intergenic | 70.0% | |
| CCACCACCAATCCGTGGCCG+TGG | - | chr4.4:14238784-14238803 | None:intergenic | 70.0% | |
| CCAGTGCCACGGCCACGGAT+TGG | + | chr4.4:14238775-14238794 | MS.gene09087:CDS | 70.0% | |
| CGACTCCACCCCCGCTGTCA+CGG | + | chr4.4:14238390-14238409 | MS.gene09087:CDS | 70.0% | |
| CGTGACAGCGGGGGTGGAGT+CGG | - | chr4.4:14238392-14238411 | None:intergenic | 70.0% | |
| ! | GGATGAAGGAGCGGTGGCGG+AGG | - | chr4.4:14238455-14238474 | None:intergenic | 70.0% |
| !! | CCACGGCCACGGATTGGTGG+TGG | + | chr4.4:14238781-14238800 | MS.gene09087:CDS | 70.0% |
| !! | GTGCCACGGCCACGGATTGG+TGG | + | chr4.4:14238778-14238797 | MS.gene09087:CDS | 70.0% |
| ACAGCGGGGGTGGAGTCGGC+GGG | - | chr4.4:14238388-14238407 | None:intergenic | 75.0% | |
| AGCCTCCGTGACAGCGGGGG+TGG | - | chr4.4:14238398-14238417 | None:intergenic | 75.0% | |
| CTCCACCCCCGCTGTCACGG+AGG | + | chr4.4:14238393-14238412 | MS.gene09087:CDS | 75.0% | |
| GACAGCGGGGGTGGAGTCGG+CGG | - | chr4.4:14238389-14238408 | None:intergenic | 75.0% | |
| GGGGTGGAGTCGGCGGGAGA+AGG | - | chr4.4:14238382-14238401 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 14238082 | 14239818 | 14238082 | ID=MS.gene09087 |
| chr4.4 | mRNA | 14238082 | 14239818 | 14238082 | ID=MS.gene09087.t1;Parent=MS.gene09087 |
| chr4.4 | exon | 14238082 | 14238937 | 14238082 | ID=MS.gene09087.t1.exon1;Parent=MS.gene09087.t1 |
| chr4.4 | CDS | 14238082 | 14238937 | 14238082 | ID=cds.MS.gene09087.t1;Parent=MS.gene09087.t1 |
| chr4.4 | exon | 14238977 | 14239818 | 14238977 | ID=MS.gene09087.t1.exon2;Parent=MS.gene09087.t1 |
| chr4.4 | CDS | 14238977 | 14239818 | 14238977 | ID=cds.MS.gene09087.t1;Parent=MS.gene09087.t1 |
| Gene Sequence |
| Protein sequence |
