AlfalfaGEDB | MS.gene09990

M. sativa cultivar XinJiangDaYe / MS.gene09990

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene09990.t1	RHN81315.1	69.6	313	91	3	1	313	1	309	2.30E-111	412.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene09990.t1	Q3EAE5	32.5	246	148	8	19	257	2	236	1.8e-19	98.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene09990.t1	A0A396JZA3	69.6	313	91	3	1	313	1	309	1.7e-111	412.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene36752	MS.gene09990	PPI
MS.gene32300	MS.gene09990	PPI
MS.gene09990	MS.gene024262	PPI
MS.gene09990	MS.gene60522	PPI
MS.gene09990	MS.gene80861	PPI
MS.gene09990	MS.gene026015	PPI
MS.gene30057	MS.gene09990	PPI
MS.gene035057	MS.gene09990	PPI
MS.gene01653	MS.gene09990	PPI
MS.gene36764	MS.gene09990	PPI
MS.gene36942	MS.gene09990	PPI
MS.gene047137	MS.gene09990	PPI
MS.gene09990	MS.gene028491	PPI
MS.gene36763	MS.gene09990	PPI
MS.gene09990	MS.gene045772	PPI
MS.gene36804	MS.gene09990	PPI
MS.gene09990	MS.gene90228	PPI
MS.gene047136	MS.gene09990	PPI
MS.gene09990	MS.gene30044	PPI
MS.gene032379	MS.gene09990	PPI
MS.gene78164	MS.gene09990	PPI
MS.gene68084	MS.gene09990	PPI
MS.gene09993	MS.gene09990	PPI
MS.gene09990	MS.gene002112	PPI
MS.gene054896	MS.gene09990	PPI
MS.gene68081	MS.gene09990	PPI
MS.gene36807	MS.gene09990	PPI
MS.gene23706	MS.gene09990	PPI
MS.gene072003	MS.gene09990	PPI
MS.gene09990	MS.gene033695	PPI
MS.gene007794	MS.gene09990	PPI
MS.gene09990	MS.gene60520	PPI
MS.gene09990	MS.gene068017	PPI
MS.gene072000	MS.gene09990	PPI
MS.gene09990	MS.gene30261	PPI
MS.gene09990	MS.gene54959	PPI
MS.gene065373	MS.gene09990	PPI
MS.gene09990	MS.gene51795	PPI
MS.gene072244	MS.gene09990	PPI
MS.gene51793	MS.gene09990	PPI
MS.gene071257	MS.gene09990	PPI
MS.gene54960	MS.gene09990	PPI
MS.gene09990	MS.gene30057	PPI
MS.gene033694	MS.gene09990	PPI
MS.gene09990	MS.gene072231	PPI
MS.gene32305	MS.gene09990	PPI
MS.gene36810	MS.gene09990	PPI
MS.gene36743	MS.gene09990	PPI
MS.gene67914	MS.gene09990	PPI
MS.gene053586	MS.gene09990	PPI
MS.gene42267	MS.gene09990	PPI
MS.gene97791	MS.gene09990	PPI
MS.gene67917	MS.gene09990	PPI
MS.gene09990	MS.gene60518	PPI
MS.gene09990	MS.gene024564	PPI
MS.gene09990	MS.gene050535	PPI
MS.gene09990	MS.gene36809	PPI
MS.gene040253	MS.gene09990	PPI
MS.gene09990	MS.gene050470	PPI
MS.gene055754	MS.gene09990	PPI
MS.gene09990	MS.gene36943	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene09990.t1	MTR_1g090883	70.096	311	89	3	1	311	1	307	3.54e-146	416
MS.gene09990.t1	MTR_4g056020	59.468	301	118	3	11	311	1	297	2.90e-110	328
MS.gene09990.t1	MTR_4g056040	55.891	331	112	4	11	311	1	327	6.50e-110	329
MS.gene09990.t1	MTR_4g056070	53.824	340	115	3	11	311	1	337	2.52e-104	312
MS.gene09990.t1	MTR_4g055990	54.303	337	115	3	11	311	1	334	9.34e-104	313
MS.gene09990.t1	MTR_4g055990	54.303	337	115	3	11	311	1	334	1.14e-103	313
MS.gene09990.t1	MTR_4g055580	53.254	338	118	4	10	311	91	424	4.47e-102	311
MS.gene09990.t1	MTR_4g056030	57.475	301	124	3	11	311	1	297	4.48e-102	307
MS.gene09990.t1	MTR_1g038710	56.467	317	128	5	1	311	1	313	8.78e-102	306
MS.gene09990.t1	MTR_4g093690	57.597	283	104	10	1	278	1	272	1.44e-86	261
MS.gene09990.t1	MTR_1g090900	70.000	180	50	3	11	188	1	178	7.97e-82	246
MS.gene09990.t1	MTR_7g110920	45.098	204	72	4	110	311	1	166	2.28e-39	141
MS.gene09990.t1	MTR_4g056010	67.021	94	29	1	84	177	6	97	1.33e-32	117
MS.gene09990.t1	MTR_5g084070	32.581	310	172	15	16	314	10	293	1.16e-18	86.7
MS.gene09990.t1	MTR_8g445780	30.667	300	182	10	19	308	13	296	2.09e-17	82.4
MS.gene09990.t1	MTR_5g080710	33.013	312	172	14	17	314	31	319	2.28e-17	82.8
MS.gene09990.t1	MTR_8g014260	28.485	330	194	12	1	308	1	310	5.74e-16	78.6
MS.gene09990.t1	MTR_2g005990	30.288	208	122	7	19	211	6	205	3.97e-15	75.9
MS.gene09990.t1	MTR_8g468810	28.024	339	209	11	1	322	1	321	4.31e-15	75.1
MS.gene09990.t1	MTR_8g468810	28.527	319	199	10	1	302	1	307	4.65e-15	75.1
MS.gene09990.t1	MTR_7g007080	31.156	199	113	6	19	206	4	189	4.85e-15	75.5
MS.gene09990.t1	MTR_8g468810	28.527	319	199	10	1	302	1	307	5.44e-15	75.1
MS.gene09990.t1	MTR_8g468810	28.527	319	199	10	1	302	1	307	8.00e-15	75.1
MS.gene09990.t1	MTR_8g468810	28.527	319	199	10	1	302	1	307	8.47e-15	74.7
MS.gene09990.t1	MTR_1g041245	28.383	303	179	11	19	305	11	291	2.99e-14	73.2
MS.gene09990.t1	MTR_4g039440	33.333	201	107	11	19	211	34	215	8.56e-14	72.0
MS.gene09990.t1	MTR_1g085120	28.185	259	156	7	19	263	167	409	1.66e-13	71.6
MS.gene09990.t1	MTR_1g085120	28.185	259	156	7	19	263	179	421	1.73e-13	71.2
MS.gene09990.t1	MTR_7g032380	31.343	201	127	4	19	217	11	202	1.95e-13	70.5
MS.gene09990.t1	MTR_1g085120	28.185	259	156	7	19	263	92	334	2.30e-13	70.9
MS.gene09990.t1	MTR_7g055943	30.093	216	126	8	13	221	34	231	2.37e-13	70.9
MS.gene09990.t1	MTR_8g467800	28.239	301	192	8	19	308	20	307	2.74e-13	70.1
MS.gene09990.t1	MTR_6g011460	29.680	219	123	7	14	222	41	238	3.02e-13	70.5
MS.gene09990.t1	MTR_1g066830	32.308	195	109	7	19	205	8	187	5.60e-13	69.3
MS.gene09990.t1	MTR_8g062270	27.129	317	200	11	16	314	13	316	5.95e-13	69.7
MS.gene09990.t1	MTR_8g467800	28.239	301	192	8	19	308	20	307	7.54e-13	69.3
MS.gene09990.t1	MTR_6g022360	30.374	214	105	8	13	210	37	222	1.16e-12	68.6
MS.gene09990.t1	MTR_2g007450	29.825	228	133	6	5	212	2	222	2.09e-12	67.8
MS.gene09990.t1	MTR_7g034115	31.818	220	123	9	19	228	11	213	3.26e-12	67.0
MS.gene09990.t1	MTR_3g107100	29.353	201	128	5	15	211	7	197	4.38e-12	66.6
MS.gene09990.t1	MTR_1g108820	29.648	199	123	7	19	214	8	192	8.13e-12	65.9
MS.gene09990.t1	MTR_7g110910	64.583	48	17	0	1	48	148	195	8.70e-12	63.9
MS.gene09990.t1	MTR_1g108820	29.851	201	122	7	19	215	8	193	8.78e-12	65.9
MS.gene09990.t1	MTR_7g056447	31.579	209	121	7	14	215	4	197	1.05e-11	65.1
MS.gene09990.t1	MTR_3g108560	32.178	202	110	9	16	211	17	197	1.27e-11	65.1
MS.gene09990.t1	MTR_8g085430	30.435	207	112	6	15	205	7	197	1.46e-11	64.7
MS.gene09990.t1	MTR_2g007400	28.094	299	161	12	19	293	12	280	1.82e-11	65.1
MS.gene09990.t1	MTR_0492s0020	31.000	200	111	9	19	212	86	264	1.92e-11	65.1
MS.gene09990.t1	MTR_4g080590	28.870	239	149	7	19	250	23	247	1.93e-11	65.1
MS.gene09990.t1	MTR_3g108560	32.178	202	110	9	16	211	17	197	1.97e-11	64.7
MS.gene09990.t1	MTR_7g115270	32.308	195	117	7	19	205	12	199	2.06e-11	64.7
MS.gene09990.t1	MTR_4g032730	26.398	322	198	11	2	306	3	302	2.10e-11	65.1
MS.gene09990.t1	MTR_4g080590	29.646	226	138	7	19	237	23	234	2.24e-11	64.7
MS.gene09990.t1	MTR_1g107385	33.649	211	117	7	19	212	32	236	2.29e-11	64.7
MS.gene09990.t1	MTR_0543s0010	31.000	200	111	9	19	212	86	264	2.60e-11	64.7
MS.gene09990.t1	MTR_1g013560	30.603	232	134	10	1	218	1	219	2.61e-11	64.3
MS.gene09990.t1	MTR_4g024780	26.415	318	210	10	19	323	146	452	3.00e-11	64.7
MS.gene09990.t1	MTR_1g013560	30.603	232	134	10	1	218	1	219	3.88e-11	63.9
MS.gene09990.t1	MTR_7g098570	28.502	207	136	4	1	205	2	198	4.00e-11	63.9
MS.gene09990.t1	MTR_1g053025	28.846	208	122	8	19	212	2	197	4.01e-11	63.9
MS.gene09990.t1	MTR_3g463820	56.604	53	23	0	9	61	3	55	4.52e-11	63.2
MS.gene09990.t1	MTR_2g007500	28.070	228	135	7	9	229	4	209	5.55e-11	63.2
MS.gene09990.t1	MTR_6g022500	27.586	232	128	7	15	229	97	305	6.83e-11	63.5
MS.gene09990.t1	MTR_2g008320	28.374	289	165	11	19	293	52	312	6.89e-11	63.2
MS.gene09990.t1	MTR_7g056287	28.571	196	119	6	19	206	3	185	8.04e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene09990.t1	AT4G00315	29.545	308	177	11	19	304	2	291	7.68e-21	92.8
MS.gene09990.t1	AT1G55660	33.597	253	136	11	19	257	53	287	1.07e-20	91.7
MS.gene09990.t1	AT1G55660	33.597	253	136	11	19	257	53	287	1.31e-20	92.4
MS.gene09990.t1	AT5G41840	27.089	347	202	9	7	311	2	339	2.25e-20	92.0
MS.gene09990.t1	AT3G59230	31.183	279	159	9	19	278	12	276	1.25e-19	89.7
MS.gene09990.t1	AT4G00320	27.879	330	198	10	13	311	7	327	2.84e-19	88.6
MS.gene09990.t1	AT3G59200	28.529	333	177	14	19	311	7	318	7.17e-19	86.7
MS.gene09990.t1	AT1G51370	31.004	229	141	5	1	227	1	214	1.32e-18	85.5
MS.gene09990.t1	AT4G14103	27.707	314	194	10	19	311	8	309	1.37e-18	85.9
MS.gene09990.t1	AT4G14103	27.707	314	194	10	19	311	8	309	1.37e-18	85.9
MS.gene09990.t1	AT3G59210	28.615	325	180	10	19	310	7	312	1.44e-18	86.7
MS.gene09990.t1	AT3G59210	28.615	325	180	10	19	310	7	312	1.44e-18	86.7
MS.gene09990.t1	AT3G59210	28.615	325	180	10	19	310	7	312	1.44e-18	86.7
MS.gene09990.t1	AT3G59210	28.615	325	180	10	19	310	7	312	1.44e-18	86.7
MS.gene09990.t1	AT3G59210	28.615	325	180	10	19	310	7	312	1.44e-18	86.7
MS.gene09990.t1	AT3G59200	28.529	333	177	14	19	311	7	318	1.59e-18	86.7
MS.gene09990.t1	AT2G42730	29.052	327	178	14	19	313	5	309	1.83e-18	86.3
MS.gene09990.t1	AT5G41830	28.000	325	186	11	13	302	7	318	2.48e-18	85.9
MS.gene09990.t1	AT1G51370	31.004	229	141	5	1	227	1	214	2.64e-18	85.5
MS.gene09990.t1	AT2G42720	30.189	318	183	14	19	313	2	303	2.80e-18	85.5
MS.gene09990.t1	AT1G51370	31.004	229	141	5	1	227	1	214	2.95e-18	85.5
MS.gene09990.t1	AT4G14103	27.707	314	194	10	19	311	8	309	3.51e-18	85.1
MS.gene09990.t1	AT4G26340	29.210	291	182	10	19	304	2	273	4.14e-18	84.7
MS.gene09990.t1	AT4G10400	28.947	304	181	11	19	312	2	280	4.52e-18	84.7
MS.gene09990.t1	AT4G10400	28.947	304	181	11	19	312	2	280	4.52e-18	84.7
MS.gene09990.t1	AT4G10400	28.947	304	181	11	19	312	2	280	4.52e-18	84.7
MS.gene09990.t1	AT5G44490	29.787	329	187	15	1	305	1	309	8.89e-18	84.0
MS.gene09990.t1	AT4G09920	29.801	302	183	11	19	311	2	283	1.31e-17	82.0
MS.gene09990.t1	AT4G09920	29.801	302	183	11	19	311	2	283	1.31e-17	82.0
MS.gene09990.t1	AT4G09920	29.801	302	183	11	19	311	2	283	1.31e-17	82.0
MS.gene09990.t1	AT5G44490	29.787	329	187	15	1	305	1	309	1.32e-17	83.6
MS.gene09990.t1	AT3G50710	30.078	256	145	8	19	258	2	239	3.00e-17	82.4
MS.gene09990.t1	AT4G09920	29.568	301	180	12	19	307	2	282	3.58e-17	81.3
MS.gene09990.t1	AT4G09920	29.568	301	180	12	19	307	2	282	3.58e-17	81.3
MS.gene09990.t1	AT4G14096	27.184	309	195	9	19	311	8	302	4.54e-17	82.0
MS.gene09990.t1	AT4G14096	27.184	309	195	9	19	311	8	302	4.54e-17	82.0
MS.gene09990.t1	AT5G53635	29.167	312	180	11	21	311	2	293	4.87e-17	81.6
MS.gene09990.t1	AT5G56370	31.452	248	141	8	19	257	2	229	5.14e-17	81.6
MS.gene09990.t1	AT5G56370	31.452	248	141	8	19	257	2	229	5.14e-17	81.6
MS.gene09990.t1	AT5G56370	31.048	248	142	8	19	257	2	229	6.19e-17	80.5
MS.gene09990.t1	AT3G59190	26.935	323	195	9	19	311	12	323	1.35e-16	80.1
MS.gene09990.t1	AT3G42770	30.164	305	178	12	24	309	4	292	1.45e-16	80.9
MS.gene09990.t1	AT3G59190	26.935	323	195	9	19	311	12	323	1.60e-16	80.5
MS.gene09990.t1	AT5G62970	30.982	326	162	14	19	307	2	301	3.27e-16	79.3
MS.gene09990.t1	AT5G44950	28.746	327	179	19	19	316	4	305	4.07e-16	79.0
MS.gene09990.t1	AT3G58860	29.276	304	178	11	15	300	3	287	7.45e-16	78.6
MS.gene09990.t1	AT5G60610	31.894	301	157	14	19	304	2	269	9.95e-16	77.8
MS.gene09990.t1	AT5G60610	31.894	301	157	14	19	304	2	269	9.95e-16	77.8
MS.gene09990.t1	AT5G53840	27.852	298	190	8	19	309	18	297	1.11e-15	77.8
MS.gene09990.t1	AT2G29910	27.301	326	191	11	19	313	5	315	1.19e-15	77.0
MS.gene09990.t1	AT2G29910	27.301	326	191	11	19	313	5	315	1.19e-15	77.0
MS.gene09990.t1	AT2G29910	27.301	326	191	11	19	313	5	315	1.19e-15	77.0
MS.gene09990.t1	AT2G29910	27.301	326	191	11	19	313	5	315	1.19e-15	77.0
MS.gene09990.t1	AT2G29910	27.301	326	191	11	19	313	29	339	1.27e-15	77.4
MS.gene09990.t1	AT2G26860	32.353	306	158	17	19	304	2	278	1.47e-15	77.4
MS.gene09990.t1	AT2G26860	32.353	306	158	17	19	304	2	278	1.47e-15	77.4
MS.gene09990.t1	AT2G29910	26.970	330	195	11	19	317	5	319	1.88e-15	76.3
MS.gene09990.t1	AT2G29910	26.970	330	195	11	19	317	5	319	1.88e-15	76.3
MS.gene09990.t1	AT2G26030	32.308	260	133	14	18	257	3	239	2.91e-15	76.6
MS.gene09990.t1	AT2G26030	32.184	261	134	14	17	257	2	239	3.01e-15	76.6
MS.gene09990.t1	AT2G26030	32.184	261	134	14	17	257	2	239	3.01e-15	76.6
MS.gene09990.t1	AT5G56380	29.236	301	172	9	19	293	2	287	4.16e-15	76.3
MS.gene09990.t1	AT5G56380	29.236	301	172	9	19	293	2	287	4.16e-15	76.3
MS.gene09990.t1	AT3G58960	27.742	310	189	11	19	305	2	299	9.78e-15	75.1
MS.gene09990.t1	AT4G22280	32.069	290	173	11	19	302	2	273	1.21e-14	73.9
MS.gene09990.t1	AT4G22280	32.069	290	173	11	19	302	2	273	1.45e-14	74.3
MS.gene09990.t1	AT5G56420	30.738	244	153	8	19	257	6	238	2.54e-14	73.6
MS.gene09990.t1	AT5G56420	30.738	244	153	8	19	257	6	238	2.54e-14	73.6
MS.gene09990.t1	AT5G56420	30.738	244	153	8	19	257	6	238	2.54e-14	73.6
MS.gene09990.t1	AT5G22670	34.978	223	118	9	19	232	11	215	2.91e-14	73.6
MS.gene09990.t1	AT4G13960	27.245	323	186	10	19	311	2	305	5.75e-14	72.8
MS.gene09990.t1	AT4G13960	27.245	323	186	10	19	311	2	305	5.75e-14	72.8
MS.gene09990.t1	AT1G58310	27.463	335	190	12	19	311	8	331	5.96e-14	72.8
MS.gene09990.t1	AT3G58880	27.187	320	190	9	19	311	3	306	8.60e-14	72.0
MS.gene09990.t1	AT5G53640	31.731	208	117	10	6	205	5	195	1.54e-13	69.3
MS.gene09990.t1	AT1G66290	26.562	320	194	10	14	313	24	322	1.76e-13	71.2
MS.gene09990.t1	AT5G38590	27.986	293	183	12	19	304	2	273	2.04e-13	70.1
MS.gene09990.t1	AT3G60040	28.923	325	185	15	19	314	230	537	2.22e-13	71.2
MS.gene09990.t1	AT5G22730	27.200	250	161	5	19	257	28	267	2.40e-13	70.5
MS.gene09990.t1	AT5G22730	27.200	250	161	5	19	257	28	267	2.44e-13	70.9
MS.gene09990.t1	AT5G22730	27.200	250	161	5	19	257	28	267	2.44e-13	70.9
MS.gene09990.t1	AT3G60040	28.923	325	185	15	19	314	232	539	2.57e-13	71.2
MS.gene09990.t1	AT3G60040	28.923	325	185	15	19	314	233	540	2.87e-13	70.9
MS.gene09990.t1	AT3G60040	28.923	325	185	15	19	314	13	320	2.95e-13	70.9
MS.gene09990.t1	AT3G60040	28.923	325	185	15	19	314	232	539	3.00e-13	70.9
MS.gene09990.t1	AT3G58900	27.523	327	192	11	19	313	2	315	3.30e-13	69.7
MS.gene09990.t1	AT3G58900	27.523	327	192	11	19	313	2	315	3.30e-13	69.7
MS.gene09990.t1	AT5G22700	28.213	319	181	14	19	311	6	302	3.59e-13	70.1
MS.gene09990.t1	AT5G22700	28.213	319	181	14	19	311	6	302	3.59e-13	70.1
MS.gene09990.t1	AT5G22700	28.213	319	181	14	19	311	6	302	3.59e-13	70.1
MS.gene09990.t1	AT5G22700	28.213	319	181	14	19	311	6	302	3.59e-13	70.1
MS.gene09990.t1	AT4G15060	27.744	328	195	16	16	323	23	328	3.76e-13	70.1
MS.gene09990.t1	AT5G22700	28.213	319	181	14	19	311	43	339	3.81e-13	70.1
MS.gene09990.t1	AT5G38590	27.986	293	183	12	19	304	2	273	4.20e-13	70.1
MS.gene09990.t1	AT5G38396	27.576	330	183	10	19	311	2	312	4.47e-13	70.1
MS.gene09990.t1	AT3G44810	27.946	297	190	8	21	302	9	296	5.17e-13	69.7
MS.gene09990.t1	AT3G58900	27.692	325	190	11	19	311	2	313	6.31e-13	69.7
MS.gene09990.t1	AT3G58900	27.692	325	190	11	19	311	2	313	7.29e-13	68.6
MS.gene09990.t1	AT1G32020	31.690	142	85	5	17	152	2	137	1.42e-12	65.5
MS.gene09990.t1	AT1G13780	26.019	319	195	11	19	309	10	315	1.49e-12	67.8
MS.gene09990.t1	AT4G13985	24.332	337	217	10	1	313	1	323	1.51e-12	68.6
MS.gene09990.t1	AT1G13780	26.019	319	195	11	19	309	10	315	1.71e-12	68.2
MS.gene09990.t1	AT3G44060	28.710	310	172	17	24	309	4	288	2.11e-12	67.8
MS.gene09990.t1	AT3G59250	27.152	302	171	8	19	309	7	270	2.26e-12	67.8
MS.gene09990.t1	AT4G15060	27.778	306	180	15	19	304	172	456	2.48e-12	67.8
MS.gene09990.t1	AT3G49150	25.633	316	196	11	19	311	16	315	2.78e-12	67.8
MS.gene09990.t1	AT2G04230	30.120	249	150	10	19	255	13	249	3.05e-12	67.4
MS.gene09990.t1	AT1G06630	27.157	313	193	13	19	314	12	306	4.34e-12	66.6
MS.gene09990.t1	AT1G06630	27.157	313	193	13	19	314	12	306	4.34e-12	66.6
MS.gene09990.t1	AT5G18780	25.868	317	201	13	19	320	11	308	6.67e-12	66.2
MS.gene09990.t1	AT5G18780	25.868	317	201	13	19	320	11	308	6.67e-12	66.2
MS.gene09990.t1	AT5G56820	29.221	308	152	13	19	300	15	282	7.81e-12	66.2
MS.gene09990.t1	AT1G06630	27.157	313	193	13	19	314	21	315	9.05e-12	65.9
MS.gene09990.t1	AT1G69630	26.364	330	210	11	3	313	2	317	9.17e-12	65.9
MS.gene09990.t1	AT1G06630	27.157	313	193	13	19	314	12	306	9.24e-12	65.9
MS.gene09990.t1	AT1G06630	27.157	313	193	13	19	314	12	306	9.24e-12	65.9
MS.gene09990.t1	AT1G06630	27.157	313	193	13	19	314	12	306	9.24e-12	65.9
MS.gene09990.t1	AT1G06630	27.157	313	193	13	19	314	12	306	9.24e-12	65.9
MS.gene09990.t1	AT1G78760	24.595	309	202	7	19	311	16	309	9.70e-12	65.9
MS.gene09990.t1	AT5G18780	25.868	317	201	13	19	320	11	308	1.16e-11	65.9
MS.gene09990.t1	AT5G18780	25.868	317	201	13	19	320	11	308	1.16e-11	65.9
MS.gene09990.t1	AT1G06630	27.157	313	193	13	19	314	12	306	1.16e-11	65.9
MS.gene09990.t1	AT1G06630	27.097	310	191	13	19	311	12	303	1.46e-11	64.7
MS.gene09990.t1	AT5G22660	27.187	320	195	13	10	309	6	307	1.60e-11	64.7
MS.gene09990.t1	AT1G16930	25.079	315	193	11	19	311	15	308	1.89e-11	65.1
MS.gene09990.t1	AT1G16930	25.079	315	193	11	19	311	15	308	1.89e-11	65.1
MS.gene09990.t1	AT1G16930	25.079	315	193	11	19	311	15	308	1.89e-11	65.1
MS.gene09990.t1	AT3G59150	26.979	341	200	16	3	315	2	321	2.00e-11	65.1
MS.gene09990.t1	AT5G22660	26.837	313	193	12	19	311	13	309	2.54e-11	64.7
MS.gene09990.t1	AT3G51530	28.213	319	200	13	1	313	14	309	3.36e-11	64.3
MS.gene09990.t1	AT5G22700	31.696	224	125	9	19	232	43	248	3.40e-11	64.3
MS.gene09990.t1	AT1G52650	26.154	325	188	11	19	311	2	306	3.71e-11	64.3
MS.gene09990.t1	AT3G26922	27.152	302	195	12	19	314	14	296	3.91e-11	63.5
MS.gene09990.t1	AT3G26922	27.152	302	195	12	19	314	14	296	3.91e-11	63.5
MS.gene09990.t1	AT2G29930	27.419	310	189	12	19	311	12	302	5.05e-11	63.9
MS.gene09990.t1	AT2G29930	27.419	310	189	12	19	311	12	302	5.05e-11	63.9
MS.gene09990.t1	AT3G03040	25.309	324	198	8	19	311	2	312	5.30e-11	63.9
MS.gene09990.t1	AT5G22720	26.994	326	198	10	1	300	1	312	6.09e-11	63.5
MS.gene09990.t1	AT3G59240	26.073	303	193	10	19	302	8	298	6.47e-11	63.5
MS.gene09990.t1	AT1G66300	24.534	322	202	9	14	313	24	326	6.60e-11	63.5
MS.gene09990.t1	AT5G25860	24.691	324	206	12	19	315	12	324	8.62e-11	63.2

Find 58 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATATAGATTGGATTGTTTC+AGG	0.217974	1.4:-72280815	None:intergenic
AATCATATGATGTACACTTA+TGG	0.253540	1.4:+72280903	MS.gene09990:CDS
CACTGCTTTGGATTTCTTGT+TGG	0.255966	1.4:-72280603	None:intergenic
ATGACAAGATCCTCAAGTTT+TGG	0.275155	1.4:-72281739	None:intergenic
CGTCCGAGAGTTTGCTTAAT+CGG	0.301365	1.4:-72280649	None:intergenic
ATTGGAGCATGCCACTGCTT+TGG	0.337326	1.4:-72280615	None:intergenic
ATCATATGATGTACACTTAT+GGG	0.341061	1.4:+72280904	MS.gene09990:CDS
TAGAATTTAACACAATATAT+TGG	0.345355	1.4:-72281120	None:intergenic
TTAATATTGCTGATCTTTCA+AGG	0.361331	1.4:+72281350	MS.gene09990:CDS
CAATTTGTATTCACTCTTGA+AGG	0.377131	1.4:+72281453	MS.gene09990:CDS
AGCATTAGACCTCAAGGTTC+AGG	0.387883	1.4:+72280934	MS.gene09990:CDS
TAATCGGTCACACTGTTCAT+TGG	0.396315	1.4:-72280633	None:intergenic
GGATTGTTTCAGGCGAGCTA+GGG	0.423410	1.4:-72280805	None:intergenic
GAATACAAATTGTTAACATC+TGG	0.424839	1.4:-72281442	None:intergenic
TGGATTGTTTCAGGCGAGCT+AGG	0.434320	1.4:-72280806	None:intergenic
TGTAATTTAAAGTCAAGGTC+GGG	0.438271	1.4:-72280767	None:intergenic
GTGAAAAGAGACAATATTGA+TGG	0.440058	1.4:-72281236	None:intergenic
CCTTGACTTTAAATTACAAA+AGG	0.440589	1.4:+72280772	MS.gene09990:CDS
GGAGAGATGCATATATAGAT+TGG	0.441384	1.4:-72280826	None:intergenic
GAGAGTAGCTTGATCAAGAT+TGG	0.441782	1.4:-72281404	None:intergenic
AGCCTAAGCGGCAATAAAGT+TGG	0.465701	1.4:-72280992	None:intergenic
AAAGTCAAGGTCGGGGATCA+TGG	0.471876	1.4:-72280759	None:intergenic
GTCCAACTTTATTGCCGCTT+AGG	0.483228	1.4:+72280990	MS.gene09990:CDS
CAGCAATATTAAGAACTTCA+AGG	0.487952	1.4:-72281339	None:intergenic
ATAAGTGTACATCATATGAT+TGG	0.497079	1.4:-72280901	None:intergenic
TTCAAAAGCATTAGACCTCA+AGG	0.503454	1.4:+72280928	MS.gene09990:CDS
GTCGGGGATCATGGTGCAGA+TGG	0.509229	1.4:-72280750	None:intergenic
CATGTGTTCTATCCACAAGA+TGG	0.510193	1.4:+72280723	MS.gene09990:CDS
AATTTGTATTCACTCTTGAA+GGG	0.522877	1.4:+72281454	MS.gene09990:CDS
ATCTCGTTGTCCACATCTTG+AGG	0.524833	1.4:+72281183	MS.gene09990:CDS
TTGTAATTTAAAGTCAAGGT+CGG	0.538688	1.4:-72280768	None:intergenic
CTAAAGCTCTTTAGTGACAA+TGG	0.542283	1.4:+72280875	MS.gene09990:CDS
AGATGAAGAATCTTTAGTGA+TGG	0.548858	1.4:-72281097	None:intergenic
GATTGTTTCAGGCGAGCTAG+GGG	0.551052	1.4:-72280804	None:intergenic
TTGTTTCAGGCGAGCTAGGG+GGG	0.555730	1.4:-72280802	None:intergenic
ATGTGTTCTATCCACAAGAT+GGG	0.567070	1.4:+72280724	MS.gene09990:CDS
TCACAAGAAGAACTGAGTCT+TGG	0.568698	1.4:-72281064	None:intergenic
ATAAAGTTGGACGTTTGTCA+AGG	0.572353	1.4:-72280979	None:intergenic
GACGGAACATTAATTTGCAG+TGG	0.572866	1.4:-72281316	None:intergenic
AGCAATATTAAGAACTTCAA+GGG	0.574759	1.4:-72281338	None:intergenic
AGGAACTTGACGTGGAATGT+TGG	0.588805	1.4:+72280954	MS.gene09990:CDS
ACAAAATGCTCCAAAACTTG+AGG	0.589127	1.4:+72281729	MS.gene09990:CDS
GTAATTTAAAGTCAAGGTCG+GGG	0.598235	1.4:-72280766	None:intergenic
TAAAGTTGGACGTTTGTCAA+GGG	0.603334	1.4:-72280978	None:intergenic
CAAGGTTCAGGAACTTGACG+TGG	0.605052	1.4:+72280946	MS.gene09990:CDS
AAGAGAAATTCCTCAAGATG+TGG	0.606892	1.4:-72281193	None:intergenic
ATTGTTTCAGGCGAGCTAGG+GGG	0.607411	1.4:-72280803	None:intergenic
CTCGTGGTCTTAAAATTGCA+CGG	0.608869	1.4:+72281031	MS.gene09990:CDS
CATCTGGTTGCTCATTAAAG+CGG	0.610186	1.4:-72281426	None:intergenic
GAAACGTAAGAATCAAGAAG+AGG	0.611044	1.4:-72281292	None:intergenic
GCAGATGGATTCCCATCTTG+TGG	0.617388	1.4:-72280735	None:intergenic
TTCCATGTCTAAGTCGCTCG+TGG	0.617485	1.4:+72281015	MS.gene09990:CDS
TGACCGATTAAGCAAACTCT+CGG	0.617679	1.4:+72280646	MS.gene09990:CDS
GACCACGAGCGACTTAGACA+TGG	0.625420	1.4:-72281017	None:intergenic
CGTCAAGTTCCTGAACCTTG+AGG	0.629391	1.4:-72280943	None:intergenic
CAACAAGAAATCCAAAGCAG+TGG	0.641414	1.4:+72280604	MS.gene09990:CDS
ATATTAAGAACTTCAAGGGA+CGG	0.644409	1.4:-72281334	None:intergenic
TTAGACATGGAAAGCCTAAG+CGG	0.711604	1.4:-72281004	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TCACAATTTATTATTTTTAT+CGG	+	chr1.4:72281660-72281679	MS.gene09990:intron	10.0%
!!	TAGAATTTAACACAATATAT+TGG	-	chr1.4:72281123-72281142	None:intergenic	15.0%
!!!	CTTTAGTTTTCTTATGTTTT+CGG	-	chr1.4:72280861-72280880	None:intergenic	20.0%
!	AAATATATGAGAATTGCAGT+TGG	+	chr1.4:72281686-72281705	MS.gene09990:intron	25.0%
!	AATCATATGATGTACACTTA+TGG	+	chr1.4:72280903-72280922	MS.gene09990:CDS	25.0%
!	AATTTGTATTCACTCTTGAA+GGG	+	chr1.4:72281454-72281473	MS.gene09990:CDS	25.0%
!	AGCAATATTAAGAACTTCAA+GGG	-	chr1.4:72281341-72281360	None:intergenic	25.0%
!	ATAAGTGTACATCATATGAT+TGG	-	chr1.4:72280904-72280923	None:intergenic	25.0%
!	ATCATATGATGTACACTTAT+GGG	+	chr1.4:72280904-72280923	MS.gene09990:CDS	25.0%
!	CCTTGACTTTAAATTACAAA+AGG	+	chr1.4:72280772-72280791	MS.gene09990:CDS	25.0%
!	GAATACAAATTGTTAACATC+TGG	-	chr1.4:72281445-72281464	None:intergenic	25.0%
!	TATATAGATTGGATTGTTTC+AGG	-	chr1.4:72280818-72280837	None:intergenic	25.0%
!	TTAATATTGCTGATCTTTCA+AGG	+	chr1.4:72281350-72281369	MS.gene09990:CDS	25.0%
!!	TTGTAATTTAAAGTCAAGGT+CGG	-	chr1.4:72280771-72280790	None:intergenic	25.0%
!!!	CCTTTTGTAATTTAAAGTCA+AGG	-	chr1.4:72280775-72280794	None:intergenic	25.0%
	AGATGAAGAATCTTTAGTGA+TGG	-	chr1.4:72281100-72281119	None:intergenic	30.0%
	ATATTAAGAACTTCAAGGGA+CGG	-	chr1.4:72281337-72281356	None:intergenic	30.0%
	CAATTTGTATTCACTCTTGA+AGG	+	chr1.4:72281453-72281472	MS.gene09990:CDS	30.0%
	CAGCAATATTAAGAACTTCA+AGG	-	chr1.4:72281342-72281361	None:intergenic	30.0%
	GTGAAAAGAGACAATATTGA+TGG	-	chr1.4:72281239-72281258	None:intergenic	30.0%
!	TGTAAGCTTCTTTTGTTGAT+AGG	-	chr1.4:72280700-72280719	None:intergenic	30.0%
!	TGTAATTTAAAGTCAAGGTC+GGG	-	chr1.4:72280770-72280789	None:intergenic	30.0%
!!!	TTTTGGAGCATTTTGTAGAA+AGG	-	chr1.4:72281725-72281744	None:intergenic	30.0%
	AAGAGAAATTCCTCAAGATG+TGG	-	chr1.4:72281196-72281215	None:intergenic	35.0%
	ATAAAGTTGGACGTTTGTCA+AGG	-	chr1.4:72280982-72281001	None:intergenic	35.0%
	ATGTGTTCTATCCACAAGAT+GGG	+	chr1.4:72280724-72280743	MS.gene09990:CDS	35.0%
	CTAAAGCTCTTTAGTGACAA+TGG	+	chr1.4:72280875-72280894	MS.gene09990:CDS	35.0%
	GAAACGTAAGAATCAAGAAG+AGG	-	chr1.4:72281295-72281314	None:intergenic	35.0%
	GGAGAGATGCATATATAGAT+TGG	-	chr1.4:72280829-72280848	None:intergenic	35.0%
	TAAAGTTGGACGTTTGTCAA+GGG	-	chr1.4:72280981-72281000	None:intergenic	35.0%
	TGTGAAAAGTGAGAAGATGT+AGG	-	chr1.4:72281645-72281664	None:intergenic	35.0%
!	GTAATTTAAAGTCAAGGTCG+GGG	-	chr1.4:72280769-72280788	None:intergenic	35.0%
!!	TTCAAAAGCATTAGACCTCA+AGG	+	chr1.4:72280928-72280947	MS.gene09990:CDS	35.0%
	CAACAAGAAATCCAAAGCAG+TGG	+	chr1.4:72280604-72280623	MS.gene09990:CDS	40.0%
	CATCTGGTTGCTCATTAAAG+CGG	-	chr1.4:72281429-72281448	None:intergenic	40.0%
	CATGTGTTCTATCCACAAGA+TGG	+	chr1.4:72280723-72280742	MS.gene09990:CDS	40.0%
	GAGAGTAGCTTGATCAAGAT+TGG	-	chr1.4:72281407-72281426	None:intergenic	40.0%
	TAATCGGTCACACTGTTCAT+TGG	-	chr1.4:72280636-72280655	None:intergenic	40.0%
	TCACAAGAAGAACTGAGTCT+TGG	-	chr1.4:72281067-72281086	None:intergenic	40.0%
	TGACCGATTAAGCAAACTCT+CGG	+	chr1.4:72280646-72280665	MS.gene09990:CDS	40.0%
	TTAGACATGGAAAGCCTAAG+CGG	-	chr1.4:72281007-72281026	None:intergenic	40.0%
!	ACTACGACACATGCACTTTT+TGG	+	chr1.4:72281582-72281601	MS.gene09990:intron	40.0%
!	CACTGCTTTGGATTTCTTGT+TGG	-	chr1.4:72280606-72280625	None:intergenic	40.0%
!	CTCGTGGTCTTAAAATTGCA+CGG	+	chr1.4:72281031-72281050	MS.gene09990:CDS	40.0%
!!	GACGGAACATTAATTTGCAG+TGG	-	chr1.4:72281319-72281338	None:intergenic	40.0%
	AGCATTAGACCTCAAGGTTC+AGG	+	chr1.4:72280934-72280953	MS.gene09990:CDS	45.0%
	AGCCTAAGCGGCAATAAAGT+TGG	-	chr1.4:72280995-72281014	None:intergenic	45.0%
	AGGAACTTGACGTGGAATGT+TGG	+	chr1.4:72280954-72280973	MS.gene09990:CDS	45.0%
	ATCTCGTTGTCCACATCTTG+AGG	+	chr1.4:72281183-72281202	MS.gene09990:CDS	45.0%
	GGTTATGCAGCATCTAAGCA+AGG	+	chr1.4:72281603-72281622	MS.gene09990:intron	45.0%
	TATGCAGCATCTAAGCAAGG+AGG	+	chr1.4:72281606-72281625	MS.gene09990:intron	45.0%
!	CGTCCGAGAGTTTGCTTAAT+CGG	-	chr1.4:72280652-72280671	None:intergenic	45.0%
!	GTCCAACTTTATTGCCGCTT+AGG	+	chr1.4:72280990-72281009	MS.gene09990:CDS	45.0%
!!	TTATGTTTTCGGTGCGTCTC+AGG	-	chr1.4:72280850-72280869	None:intergenic	45.0%
	AAAGTCAAGGTCGGGGATCA+TGG	-	chr1.4:72280762-72280781	None:intergenic	50.0%
	ATTGGAGCATGCCACTGCTT+TGG	-	chr1.4:72280618-72280637	None:intergenic	50.0%
	ATTGTTTCAGGCGAGCTAGG+GGG	-	chr1.4:72280806-72280825	None:intergenic	50.0%
	CAAGGTTCAGGAACTTGACG+TGG	+	chr1.4:72280946-72280965	MS.gene09990:CDS	50.0%
	CGTCAAGTTCCTGAACCTTG+AGG	-	chr1.4:72280946-72280965	None:intergenic	50.0%
	GATTGTTTCAGGCGAGCTAG+GGG	-	chr1.4:72280807-72280826	None:intergenic	50.0%
	GGATTGTTTCAGGCGAGCTA+GGG	-	chr1.4:72280808-72280827	None:intergenic	50.0%
	TGGATTGTTTCAGGCGAGCT+AGG	-	chr1.4:72280809-72280828	None:intergenic	50.0%
	TTCCATGTCTAAGTCGCTCG+TGG	+	chr1.4:72281015-72281034	MS.gene09990:CDS	50.0%
!	GCAGATGGATTCCCATCTTG+TGG	-	chr1.4:72280738-72280757	None:intergenic	50.0%
	GACCACGAGCGACTTAGACA+TGG	-	chr1.4:72281020-72281039	None:intergenic	55.0%
	TTGTTTCAGGCGAGCTAGGG+GGG	-	chr1.4:72280805-72280824	None:intergenic	55.0%
	GTCGGGGATCATGGTGCAGA+TGG	-	chr1.4:72280753-72280772	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	72280593	72281749	72280593	ID=MS.gene09990
chr1.4	mRNA	72280593	72281749	72280593	ID=MS.gene09990.t1;Parent=MS.gene09990
chr1.4	exon	72280593	72281522	72280593	ID=MS.gene09990.t1.exon1;Parent=MS.gene09990.t1
chr1.4	CDS	72280593	72281522	72280593	ID=cds.MS.gene09990.t1;Parent=MS.gene09990.t1
chr1.4	exon	72281705	72281749	72281705	ID=MS.gene09990.t1.exon2;Parent=MS.gene09990.t1
chr1.4	CDS	72281705	72281749	72281705	ID=cds.MS.gene09990.t1;Parent=MS.gene09990.t1

Gene Sequence

>MS.gene09990

ATGGAGGAAGCCAACAAGAAATCCAAAGCAGTGGCATGCTCCAATGAACAGTGTGACCGATTAAGCAAACTCTCGGACGAATTGATTCTTCGTATTCTGTCTTTCCTATCAACAAAAGAAGCTTACAAAACATGTGTTCTATCCACAAGATGGGAATCCATCTGCACCATGATCCCCGACCTTGACTTTAAATTACAAAAGGTTTCAGACCCCCCTAGCTCGCCTGAAACAATCCAATCTATATATGCATCTCTCCTGAGACGCACCGAAAACATAAGAAAACTAAAGCTCTTTAGTGACAATGGCTGCCAATCATATGATGTACACTTATGGGTTTCAAAAGCATTAGACCTCAAGGTTCAGGAACTTGACGTGGAATGTTGGTCCCTTGACAAACGTCCAACTTTATTGCCGCTTAGGCTTTCCATGTCTAAGTCGCTCGTGGTCTTAAAATTGCACGGTGAAGCTCAGCCAAGACTCAGTTCTTCTTGTGATGTATCTTTTCCATCACTAAAGATTCTTCATCTCCAATATATTGTGTTAAATTCTATCATAGATAATCATAGTGAGTATGATCTCTCTGAATTTCTATCTCGTTGTCCACATCTTGAGGAATTTCTCTTACATGACGTCTTCAAACAAGCCATCAATATTGTCTCTTTTCACTCATTAAAGAGATTAATATTTCTTTTAGAGATGCCTCTTCTTGATTCTTACGTTTCTCCACTGCAAATTAATGTTCCGTCCCTTGAAGTTCTTAATATTGCTGATCTTTCAAGGACTCACAAAAAATACGAGCTTATAAACTTGTCCAATCTTGATCAAGCTACTCTCCGCTTTAATGAGCAACCAGATGTTAACAATTTGTATTCACTCTTGAAGGGAGTTTCTAATGTCAAATCATTGACTGTCAATTATGAAACTATTCATGTAAGTTTCATTTTTTTATTCTTTTTATTTTATTTTATTTTTTTATGACAAGTTCAATAACTACGACACATGCACTTTTTGGTTATGCAGCATCTAAGCAAGGAGGAAAATCTTGACAACCTACATCTTCTCACTTTTCACAATTTATTATTTTTATCGGTTGAAATATATGAGAATTGCAGTTGGAATATGCTCGTTACCTTTCTACAAAATGCTCCAAAACTTGA

Protein sequence

>MS.gene09990.t1

MEEANKKSKAVACSNEQCDRLSKLSDELILRILSFLSTKEAYKTCVLSTRWESICTMIPDLDFKLQKVSDPPSSPETIQSIYASLLRRTENIRKLKLFSDNGCQSYDVHLWVSKALDLKVQELDVECWSLDKRPTLLPLRLSMSKSLVVLKLHGEAQPRLSSSCDVSFPSLKILHLQYIVLNSIIDNHSEYDLSEFLSRCPHLEEFLLHDVFKQAINIVSFHSLKRLIFLLEMPLLDSYVSPLQINVPSLEVLNIADLSRTHKKYELINLSNLDQATLRFNEQPDVNNLYSLLKGVSNVKSLTVNYETIHLEYARYLSTKCSKT