Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68081.t1 | KEH43359.1 | 69.7 | 346 | 103 | 1 | 6 | 351 | 14 | 357 | 2.00E-129 | 472.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68081.t1 | Q9LX48 | 28.9 | 380 | 218 | 12 | 10 | 351 | 11 | 376 | 4.9e-23 | 110.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68081.t1 | A0A072VN11 | 69.7 | 346 | 103 | 1 | 6 | 351 | 14 | 357 | 1.5e-129 | 472.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68081.t1 | MTR_1g090883 | 69.429 | 350 | 103 | 2 | 2 | 351 | 12 | 357 | 7.55e-169 | 475 |
MS.gene68081.t1 | MTR_4g056040 | 62.467 | 381 | 109 | 4 | 1 | 351 | 1 | 377 | 2.14e-148 | 428 |
MS.gene68081.t1 | MTR_4g056020 | 64.857 | 350 | 119 | 3 | 1 | 350 | 1 | 346 | 2.83e-146 | 421 |
MS.gene68081.t1 | MTR_4g056030 | 63.143 | 350 | 125 | 3 | 1 | 350 | 1 | 346 | 4.55e-140 | 405 |
MS.gene68081.t1 | MTR_4g056070 | 58.568 | 391 | 118 | 5 | 1 | 351 | 1 | 387 | 1.15e-137 | 398 |
MS.gene68081.t1 | MTR_1g038710 | 63.277 | 354 | 120 | 5 | 1 | 348 | 11 | 360 | 1.20e-137 | 399 |
MS.gene68081.t1 | MTR_4g055990 | 58.656 | 387 | 119 | 5 | 1 | 350 | 1 | 383 | 1.12e-133 | 390 |
MS.gene68081.t1 | MTR_4g055990 | 58.656 | 387 | 119 | 5 | 1 | 350 | 1 | 383 | 2.33e-133 | 390 |
MS.gene68081.t1 | MTR_4g055580 | 58.915 | 387 | 117 | 6 | 1 | 350 | 92 | 473 | 1.03e-130 | 386 |
MS.gene68081.t1 | MTR_1g090900 | 92.697 | 178 | 13 | 0 | 1 | 178 | 1 | 178 | 3.93e-115 | 332 |
MS.gene68081.t1 | MTR_4g093690 | 56.827 | 271 | 104 | 9 | 7 | 272 | 14 | 276 | 2.20e-80 | 246 |
MS.gene68081.t1 | MTR_7g110920 | 53.360 | 253 | 79 | 3 | 101 | 351 | 1 | 216 | 5.32e-74 | 232 |
MS.gene68081.t1 | MTR_4g056010 | 70.968 | 93 | 26 | 1 | 75 | 167 | 6 | 97 | 2.33e-34 | 122 |
MS.gene68081.t1 | MTR_5g084070 | 32.219 | 329 | 183 | 14 | 5 | 322 | 7 | 306 | 8.51e-20 | 90.5 |
MS.gene68081.t1 | MTR_4g056020 | 80.000 | 50 | 10 | 0 | 301 | 350 | 1 | 50 | 1.45e-19 | 85.1 |
MS.gene68081.t1 | MTR_8g445780 | 29.167 | 360 | 214 | 13 | 9 | 351 | 11 | 346 | 2.11e-19 | 89.0 |
MS.gene68081.t1 | MTR_4g032730 | 28.981 | 314 | 187 | 10 | 4 | 298 | 8 | 304 | 1.16e-18 | 87.0 |
MS.gene68081.t1 | MTR_8g467800 | 30.904 | 343 | 201 | 14 | 4 | 332 | 13 | 333 | 2.19e-18 | 85.5 |
MS.gene68081.t1 | MTR_8g467800 | 30.168 | 358 | 220 | 13 | 4 | 348 | 13 | 353 | 3.31e-18 | 85.9 |
MS.gene68081.t1 | MTR_7g033945 | 34.463 | 177 | 101 | 4 | 1 | 167 | 1 | 172 | 4.92e-18 | 81.3 |
MS.gene68081.t1 | MTR_4g080590 | 29.121 | 364 | 210 | 15 | 10 | 350 | 22 | 360 | 7.26e-18 | 84.3 |
MS.gene68081.t1 | MTR_4g080590 | 29.121 | 364 | 210 | 15 | 10 | 350 | 22 | 360 | 7.96e-18 | 84.7 |
MS.gene68081.t1 | MTR_6g011460 | 33.466 | 251 | 130 | 11 | 11 | 245 | 46 | 275 | 8.28e-18 | 84.3 |
MS.gene68081.t1 | MTR_1g041245 | 33.166 | 199 | 120 | 4 | 1 | 195 | 1 | 190 | 8.70e-18 | 84.0 |
MS.gene68081.t1 | MTR_8g014260 | 27.957 | 372 | 216 | 13 | 8 | 351 | 13 | 360 | 1.40e-17 | 84.0 |
MS.gene68081.t1 | MTR_7g034115 | 37.037 | 189 | 106 | 6 | 11 | 195 | 11 | 190 | 2.56e-17 | 82.8 |
MS.gene68081.t1 | MTR_5g080710 | 31.366 | 322 | 182 | 15 | 11 | 313 | 33 | 334 | 4.32e-17 | 82.4 |
MS.gene68081.t1 | MTR_8g062270 | 28.611 | 360 | 216 | 13 | 11 | 348 | 16 | 356 | 1.19e-16 | 81.3 |
MS.gene68081.t1 | MTR_5g039950 | 27.809 | 356 | 193 | 13 | 10 | 350 | 22 | 328 | 1.85e-16 | 80.5 |
MS.gene68081.t1 | MTR_3g048290 | 26.703 | 367 | 234 | 11 | 7 | 350 | 19 | 373 | 3.85e-16 | 79.7 |
MS.gene68081.t1 | MTR_7g033915 | 35.948 | 153 | 86 | 3 | 1 | 143 | 1 | 151 | 9.56e-16 | 77.8 |
MS.gene68081.t1 | MTR_8g468840 | 27.673 | 318 | 200 | 11 | 10 | 309 | 13 | 318 | 1.37e-15 | 77.8 |
MS.gene68081.t1 | MTR_7g007080 | 33.772 | 228 | 120 | 11 | 9 | 221 | 2 | 213 | 1.63e-15 | 77.4 |
MS.gene68081.t1 | MTR_8g468760 | 30.208 | 288 | 163 | 12 | 5 | 271 | 3 | 273 | 1.93e-15 | 77.4 |
MS.gene68081.t1 | MTR_8g468810 | 29.801 | 302 | 183 | 14 | 6 | 292 | 20 | 307 | 4.96e-15 | 75.5 |
MS.gene68081.t1 | MTR_7g032380 | 32.203 | 177 | 110 | 3 | 1 | 172 | 1 | 172 | 5.34e-15 | 75.5 |
MS.gene68081.t1 | MTR_8g468810 | 29.121 | 364 | 223 | 17 | 6 | 350 | 20 | 367 | 5.85e-15 | 75.5 |
MS.gene68081.t1 | MTR_8g468810 | 29.801 | 302 | 183 | 14 | 6 | 292 | 20 | 307 | 6.00e-15 | 75.1 |
MS.gene68081.t1 | MTR_4g081030 | 29.412 | 340 | 195 | 14 | 7 | 327 | 13 | 326 | 8.56e-15 | 75.1 |
MS.gene68081.t1 | MTR_8g468810 | 29.801 | 302 | 183 | 14 | 6 | 292 | 20 | 307 | 8.83e-15 | 75.1 |
MS.gene68081.t1 | MTR_3g023630 | 29.630 | 243 | 138 | 6 | 9 | 235 | 6 | 231 | 1.15e-14 | 74.7 |
MS.gene68081.t1 | MTR_7g055943 | 25.634 | 355 | 180 | 11 | 11 | 351 | 40 | 324 | 1.18e-14 | 75.1 |
MS.gene68081.t1 | MTR_3g099900 | 26.176 | 340 | 205 | 13 | 8 | 325 | 15 | 330 | 2.13e-14 | 73.9 |
MS.gene68081.t1 | MTR_7g056447 | 35.323 | 201 | 111 | 7 | 4 | 198 | 2 | 189 | 3.65e-14 | 72.4 |
MS.gene68081.t1 | MTR_3g014590 | 26.774 | 310 | 208 | 7 | 1 | 302 | 1 | 299 | 4.53e-14 | 72.8 |
MS.gene68081.t1 | MTR_7g115270 | 34.000 | 200 | 107 | 9 | 10 | 195 | 11 | 199 | 4.96e-14 | 73.2 |
MS.gene68081.t1 | MTR_4g039440 | 26.836 | 354 | 177 | 16 | 11 | 351 | 34 | 318 | 6.15e-14 | 72.8 |
MS.gene68081.t1 | MTR_2g083840 | 27.869 | 305 | 186 | 12 | 9 | 294 | 19 | 308 | 7.21e-14 | 72.8 |
MS.gene68081.t1 | MTR_3g014550 | 26.214 | 309 | 212 | 5 | 1 | 302 | 1 | 300 | 8.46e-14 | 72.0 |
MS.gene68081.t1 | MTR_5g005690 | 28.111 | 217 | 144 | 4 | 7 | 219 | 17 | 225 | 9.69e-14 | 72.4 |
MS.gene68081.t1 | MTR_6g022360 | 29.437 | 231 | 116 | 9 | 11 | 221 | 43 | 246 | 9.96e-14 | 72.0 |
MS.gene68081.t1 | MTR_7g098570 | 31.780 | 236 | 139 | 9 | 11 | 235 | 20 | 244 | 1.53e-13 | 72.0 |
MS.gene68081.t1 | MTR_3g107100 | 28.889 | 360 | 175 | 17 | 1 | 348 | 1 | 291 | 1.93e-13 | 71.2 |
MS.gene68081.t1 | MTR_8g085430 | 30.899 | 178 | 106 | 4 | 11 | 176 | 11 | 183 | 1.96e-13 | 70.9 |
MS.gene68081.t1 | MTR_1g085120 | 32.828 | 198 | 105 | 7 | 11 | 196 | 179 | 360 | 1.97e-13 | 71.6 |
MS.gene68081.t1 | MTR_2g005990 | 30.882 | 204 | 118 | 7 | 11 | 198 | 6 | 202 | 3.07e-13 | 70.5 |
MS.gene68081.t1 | MTR_1g085120 | 32.828 | 198 | 105 | 7 | 11 | 196 | 167 | 348 | 3.15e-13 | 70.9 |
MS.gene68081.t1 | MTR_1g085120 | 32.828 | 198 | 105 | 7 | 11 | 196 | 92 | 273 | 3.61e-13 | 70.5 |
MS.gene68081.t1 | MTR_4g050930 | 25.680 | 331 | 226 | 8 | 5 | 326 | 23 | 342 | 5.90e-13 | 69.7 |
MS.gene68081.t1 | MTR_3g087260 | 27.778 | 378 | 211 | 13 | 10 | 351 | 11 | 362 | 7.83e-13 | 69.7 |
MS.gene68081.t1 | MTR_4g050930 | 25.680 | 331 | 226 | 8 | 5 | 326 | 23 | 342 | 1.02e-12 | 69.3 |
MS.gene68081.t1 | MTR_7g039630 | 28.610 | 367 | 186 | 14 | 10 | 350 | 22 | 338 | 1.22e-12 | 68.6 |
MS.gene68081.t1 | MTR_2g007500 | 31.120 | 241 | 117 | 12 | 4 | 222 | 7 | 220 | 1.42e-12 | 68.2 |
MS.gene68081.t1 | MTR_6g022500 | 31.579 | 228 | 122 | 9 | 11 | 219 | 101 | 313 | 1.60e-12 | 68.6 |
MS.gene68081.t1 | MTR_8g062310 | 31.696 | 224 | 128 | 10 | 1 | 217 | 15 | 220 | 1.87e-12 | 68.6 |
MS.gene68081.t1 | MTR_7g033940 | 35.433 | 127 | 74 | 3 | 13 | 134 | 96 | 219 | 2.44e-12 | 66.2 |
MS.gene68081.t1 | MTR_4g024680 | 31.122 | 196 | 106 | 8 | 7 | 201 | 518 | 685 | 4.24e-12 | 67.8 |
MS.gene68081.t1 | MTR_8g014160 | 27.900 | 319 | 184 | 11 | 4 | 295 | 34 | 333 | 5.06e-12 | 67.0 |
MS.gene68081.t1 | MTR_7g056287 | 25.568 | 352 | 177 | 14 | 11 | 351 | 3 | 280 | 5.38e-12 | 66.6 |
MS.gene68081.t1 | MTR_4g045680 | 26.984 | 315 | 202 | 11 | 8 | 308 | 13 | 313 | 5.81e-12 | 66.6 |
MS.gene68081.t1 | MTR_7g017280 | 25.217 | 345 | 226 | 11 | 4 | 324 | 141 | 477 | 1.17e-11 | 66.2 |
MS.gene68081.t1 | MTR_4g090940 | 27.193 | 342 | 210 | 10 | 5 | 326 | 153 | 475 | 1.49e-11 | 65.9 |
MS.gene68081.t1 | MTR_3g108150 | 31.441 | 229 | 134 | 9 | 6 | 224 | 8 | 223 | 2.04e-11 | 65.1 |
MS.gene68081.t1 | MTR_1g053025 | 29.787 | 235 | 133 | 9 | 11 | 222 | 2 | 227 | 2.42e-11 | 64.7 |
MS.gene68081.t1 | MTR_7g056433 | 31.646 | 237 | 132 | 12 | 6 | 230 | 7 | 225 | 3.15e-11 | 64.3 |
MS.gene68081.t1 | MTR_6g025270 | 23.481 | 362 | 238 | 9 | 6 | 346 | 29 | 372 | 3.24e-11 | 64.3 |
MS.gene68081.t1 | MTR_4g092300 | 26.190 | 336 | 227 | 6 | 5 | 326 | 19 | 347 | 3.74e-11 | 64.7 |
MS.gene68081.t1 | MTR_4g051480 | 26.190 | 336 | 227 | 6 | 5 | 326 | 19 | 347 | 3.91e-11 | 64.7 |
MS.gene68081.t1 | MTR_3g108560 | 28.653 | 349 | 175 | 15 | 8 | 351 | 17 | 296 | 4.44e-11 | 63.5 |
MS.gene68081.t1 | MTR_3g108560 | 28.653 | 349 | 175 | 15 | 8 | 351 | 17 | 296 | 4.44e-11 | 63.9 |
MS.gene68081.t1 | MTR_7g032370 | 26.984 | 252 | 158 | 8 | 22 | 257 | 1 | 242 | 4.55e-11 | 63.9 |
MS.gene68081.t1 | MTR_7g098510 | 33.529 | 170 | 99 | 5 | 11 | 173 | 18 | 180 | 4.81e-11 | 63.9 |
MS.gene68081.t1 | MTR_3g019240 | 26.331 | 338 | 213 | 12 | 7 | 326 | 22 | 341 | 5.11e-11 | 63.9 |
MS.gene68081.t1 | MTR_1089s0010 | 31.148 | 183 | 99 | 5 | 5 | 173 | 2 | 171 | 6.88e-11 | 63.5 |
MS.gene68081.t1 | MTR_4g024780 | 29.126 | 206 | 132 | 8 | 2 | 201 | 136 | 333 | 7.95e-11 | 63.5 |
MS.gene68081.t1 | MTR_7g033990 | 33.571 | 140 | 85 | 4 | 1 | 134 | 1 | 138 | 8.40e-11 | 63.2 |
MS.gene68081.t1 | MTR_7g034110 | 33.613 | 119 | 74 | 3 | 1 | 117 | 1 | 116 | 8.62e-11 | 62.8 |
MS.gene68081.t1 | MTR_7g056277 | 25.000 | 352 | 179 | 13 | 11 | 351 | 259 | 536 | 9.35e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68081.t1 | AT3G59190 | 30.749 | 374 | 213 | 12 | 10 | 351 | 11 | 370 | 4.41e-29 | 116 |
MS.gene68081.t1 | AT3G59190 | 30.749 | 374 | 213 | 12 | 10 | 351 | 11 | 370 | 1.31e-28 | 116 |
MS.gene68081.t1 | AT3G59230 | 28.947 | 380 | 218 | 12 | 10 | 351 | 11 | 376 | 9.86e-27 | 110 |
MS.gene68081.t1 | AT4G10400 | 32.184 | 348 | 195 | 15 | 11 | 350 | 2 | 316 | 1.64e-25 | 106 |
MS.gene68081.t1 | AT4G10400 | 32.184 | 348 | 195 | 15 | 11 | 350 | 2 | 316 | 1.64e-25 | 106 |
MS.gene68081.t1 | AT4G10400 | 32.184 | 348 | 195 | 15 | 11 | 350 | 2 | 316 | 1.64e-25 | 106 |
MS.gene68081.t1 | AT4G14103 | 28.962 | 366 | 219 | 13 | 10 | 351 | 7 | 355 | 2.80e-24 | 102 |
MS.gene68081.t1 | AT4G14103 | 28.962 | 366 | 219 | 13 | 10 | 351 | 7 | 355 | 2.80e-24 | 102 |
MS.gene68081.t1 | AT4G14103 | 29.428 | 367 | 216 | 14 | 10 | 351 | 7 | 355 | 6.03e-24 | 102 |
MS.gene68081.t1 | AT5G41840 | 27.907 | 387 | 218 | 11 | 11 | 351 | 14 | 385 | 1.39e-23 | 102 |
MS.gene68081.t1 | AT4G00315 | 29.282 | 362 | 209 | 16 | 11 | 348 | 2 | 340 | 5.37e-23 | 99.8 |
MS.gene68081.t1 | AT2G42720 | 30.518 | 367 | 208 | 14 | 11 | 351 | 2 | 347 | 5.72e-23 | 99.8 |
MS.gene68081.t1 | AT4G14096 | 28.926 | 363 | 216 | 14 | 10 | 351 | 7 | 348 | 1.98e-22 | 98.2 |
MS.gene68081.t1 | AT4G14096 | 28.926 | 363 | 216 | 14 | 10 | 351 | 7 | 348 | 1.98e-22 | 98.2 |
MS.gene68081.t1 | AT5G60610 | 29.558 | 362 | 193 | 17 | 11 | 351 | 2 | 322 | 7.80e-22 | 95.9 |
MS.gene68081.t1 | AT5G60610 | 29.558 | 362 | 193 | 17 | 11 | 351 | 2 | 322 | 7.80e-22 | 95.9 |
MS.gene68081.t1 | AT5G41830 | 28.307 | 378 | 225 | 13 | 7 | 351 | 9 | 373 | 9.44e-22 | 96.7 |
MS.gene68081.t1 | AT4G09920 | 31.186 | 295 | 182 | 10 | 11 | 299 | 2 | 281 | 1.30e-21 | 93.6 |
MS.gene68081.t1 | AT4G09920 | 31.186 | 295 | 182 | 10 | 11 | 299 | 2 | 281 | 1.30e-21 | 93.6 |
MS.gene68081.t1 | AT4G09920 | 31.186 | 295 | 182 | 10 | 11 | 299 | 2 | 281 | 1.30e-21 | 93.6 |
MS.gene68081.t1 | AT4G26340 | 28.653 | 349 | 212 | 12 | 11 | 350 | 2 | 322 | 2.22e-21 | 94.7 |
MS.gene68081.t1 | AT5G56370 | 29.310 | 348 | 204 | 16 | 11 | 350 | 2 | 315 | 1.75e-20 | 91.3 |
MS.gene68081.t1 | AT4G09920 | 31.058 | 293 | 181 | 10 | 11 | 297 | 2 | 279 | 2.45e-20 | 90.5 |
MS.gene68081.t1 | AT4G09920 | 31.058 | 293 | 181 | 10 | 11 | 297 | 2 | 279 | 2.45e-20 | 90.5 |
MS.gene68081.t1 | AT1G55660 | 28.177 | 362 | 213 | 17 | 11 | 348 | 53 | 391 | 2.80e-20 | 92.0 |
MS.gene68081.t1 | AT3G59200 | 28.684 | 380 | 212 | 14 | 10 | 351 | 6 | 364 | 3.22e-20 | 90.9 |
MS.gene68081.t1 | AT5G56370 | 29.513 | 349 | 202 | 17 | 11 | 350 | 2 | 315 | 3.81e-20 | 91.3 |
MS.gene68081.t1 | AT5G56370 | 29.513 | 349 | 202 | 17 | 11 | 350 | 2 | 315 | 3.81e-20 | 91.3 |
MS.gene68081.t1 | AT4G00320 | 27.034 | 381 | 226 | 12 | 7 | 351 | 9 | 373 | 3.93e-20 | 91.7 |
MS.gene68081.t1 | AT3G58960 | 27.473 | 364 | 226 | 13 | 11 | 350 | 2 | 351 | 4.15e-20 | 91.7 |
MS.gene68081.t1 | AT3G59160 | 25.126 | 398 | 225 | 13 | 10 | 351 | 12 | 392 | 8.32e-20 | 90.5 |
MS.gene68081.t1 | AT3G59200 | 28.684 | 380 | 212 | 14 | 10 | 351 | 6 | 364 | 1.32e-19 | 90.1 |
MS.gene68081.t1 | AT2G26860 | 28.286 | 350 | 220 | 11 | 11 | 350 | 2 | 330 | 1.36e-19 | 89.7 |
MS.gene68081.t1 | AT2G26860 | 28.286 | 350 | 220 | 11 | 11 | 350 | 2 | 330 | 1.36e-19 | 89.7 |
MS.gene68081.t1 | AT1G55660 | 28.840 | 319 | 182 | 14 | 11 | 301 | 53 | 354 | 2.35e-19 | 88.6 |
MS.gene68081.t1 | AT3G59210 | 28.877 | 374 | 220 | 13 | 7 | 351 | 3 | 359 | 4.17e-19 | 88.6 |
MS.gene68081.t1 | AT3G59210 | 28.877 | 374 | 220 | 13 | 7 | 351 | 3 | 359 | 4.17e-19 | 88.6 |
MS.gene68081.t1 | AT3G59210 | 28.877 | 374 | 220 | 13 | 7 | 351 | 3 | 359 | 4.17e-19 | 88.6 |
MS.gene68081.t1 | AT3G59210 | 28.877 | 374 | 220 | 13 | 7 | 351 | 3 | 359 | 4.17e-19 | 88.6 |
MS.gene68081.t1 | AT3G59210 | 28.877 | 374 | 220 | 13 | 7 | 351 | 3 | 359 | 4.17e-19 | 88.6 |
MS.gene68081.t1 | AT5G56420 | 28.693 | 352 | 212 | 12 | 10 | 350 | 5 | 328 | 7.88e-19 | 87.4 |
MS.gene68081.t1 | AT5G56420 | 28.693 | 352 | 212 | 12 | 10 | 350 | 5 | 328 | 7.88e-19 | 87.4 |
MS.gene68081.t1 | AT5G56420 | 28.693 | 352 | 212 | 12 | 10 | 350 | 5 | 328 | 7.88e-19 | 87.4 |
MS.gene68081.t1 | AT5G44950 | 27.005 | 374 | 213 | 15 | 10 | 351 | 3 | 348 | 4.22e-18 | 85.5 |
MS.gene68081.t1 | AT2G04230 | 27.473 | 364 | 211 | 12 | 9 | 350 | 11 | 343 | 4.25e-18 | 85.5 |
MS.gene68081.t1 | AT2G42730 | 29.111 | 371 | 207 | 16 | 10 | 348 | 4 | 350 | 5.11e-18 | 85.1 |
MS.gene68081.t1 | AT3G59250 | 29.178 | 353 | 199 | 11 | 10 | 351 | 6 | 318 | 6.34e-18 | 84.7 |
MS.gene68081.t1 | AT5G56400 | 27.072 | 362 | 224 | 12 | 1 | 350 | 23 | 356 | 7.43e-18 | 84.7 |
MS.gene68081.t1 | AT5G56380 | 26.575 | 365 | 222 | 10 | 11 | 350 | 2 | 345 | 1.17e-17 | 84.0 |
MS.gene68081.t1 | AT5G56380 | 26.575 | 365 | 222 | 10 | 11 | 350 | 2 | 345 | 1.17e-17 | 84.0 |
MS.gene68081.t1 | AT1G78760 | 28.455 | 369 | 210 | 15 | 9 | 351 | 14 | 354 | 2.42e-17 | 83.2 |
MS.gene68081.t1 | AT5G53635 | 28.333 | 360 | 214 | 15 | 13 | 350 | 2 | 339 | 2.50e-17 | 83.2 |
MS.gene68081.t1 | AT3G58860 | 26.870 | 361 | 225 | 10 | 8 | 350 | 4 | 343 | 2.91e-17 | 83.2 |
MS.gene68081.t1 | AT5G56440 | 28.125 | 352 | 212 | 11 | 11 | 351 | 2 | 323 | 3.30e-17 | 82.8 |
MS.gene68081.t1 | AT5G38590 | 30.952 | 294 | 179 | 12 | 11 | 298 | 2 | 277 | 6.62e-17 | 80.5 |
MS.gene68081.t1 | AT1G51370 | 29.388 | 245 | 148 | 7 | 3 | 244 | 11 | 233 | 7.03e-17 | 81.3 |
MS.gene68081.t1 | AT3G03040 | 26.005 | 373 | 228 | 11 | 11 | 351 | 2 | 358 | 9.00e-17 | 81.6 |
MS.gene68081.t1 | AT5G38590 | 29.480 | 346 | 210 | 14 | 11 | 350 | 2 | 319 | 1.47e-16 | 80.9 |
MS.gene68081.t1 | AT1G51370 | 29.388 | 245 | 148 | 7 | 3 | 244 | 11 | 233 | 1.68e-16 | 80.5 |
MS.gene68081.t1 | AT1G51370 | 29.388 | 245 | 148 | 7 | 3 | 244 | 11 | 233 | 2.14e-16 | 80.5 |
MS.gene68081.t1 | AT1G06630 | 29.805 | 359 | 218 | 14 | 10 | 351 | 11 | 352 | 3.40e-16 | 79.3 |
MS.gene68081.t1 | AT1G06630 | 29.805 | 359 | 218 | 14 | 10 | 351 | 11 | 352 | 3.40e-16 | 79.3 |
MS.gene68081.t1 | AT1G06630 | 29.805 | 359 | 218 | 14 | 10 | 351 | 11 | 352 | 5.74e-16 | 79.0 |
MS.gene68081.t1 | AT1G06630 | 29.805 | 359 | 218 | 14 | 10 | 351 | 11 | 352 | 5.74e-16 | 79.0 |
MS.gene68081.t1 | AT1G06630 | 29.805 | 359 | 218 | 14 | 10 | 351 | 11 | 352 | 5.74e-16 | 79.0 |
MS.gene68081.t1 | AT1G06630 | 29.805 | 359 | 218 | 14 | 10 | 351 | 11 | 352 | 5.74e-16 | 79.0 |
MS.gene68081.t1 | AT5G53840 | 27.671 | 365 | 218 | 14 | 4 | 351 | 11 | 346 | 6.77e-16 | 79.0 |
MS.gene68081.t1 | AT3G03030 | 25.000 | 376 | 233 | 11 | 11 | 351 | 2 | 363 | 7.66e-16 | 79.0 |
MS.gene68081.t1 | AT1G06630 | 29.805 | 359 | 218 | 14 | 10 | 351 | 20 | 361 | 8.84e-16 | 78.6 |
MS.gene68081.t1 | AT3G50710 | 28.571 | 350 | 216 | 12 | 11 | 350 | 2 | 327 | 9.48e-16 | 78.2 |
MS.gene68081.t1 | AT1G06630 | 30.000 | 360 | 216 | 15 | 10 | 351 | 11 | 352 | 1.21e-15 | 78.2 |
MS.gene68081.t1 | AT4G22280 | 30.199 | 351 | 216 | 11 | 10 | 351 | 1 | 331 | 1.58e-15 | 77.0 |
MS.gene68081.t1 | AT3G49030 | 27.841 | 352 | 215 | 14 | 10 | 350 | 20 | 343 | 1.64e-15 | 77.8 |
MS.gene68081.t1 | AT4G13960 | 27.273 | 374 | 215 | 13 | 11 | 351 | 2 | 351 | 1.92e-15 | 77.4 |
MS.gene68081.t1 | AT4G13960 | 27.273 | 374 | 215 | 13 | 11 | 351 | 2 | 351 | 1.92e-15 | 77.4 |
MS.gene68081.t1 | AT4G22280 | 30.286 | 350 | 215 | 11 | 11 | 351 | 2 | 331 | 3.07e-15 | 76.6 |
MS.gene68081.t1 | AT1G16930 | 25.737 | 373 | 231 | 12 | 2 | 351 | 6 | 355 | 3.51e-15 | 76.6 |
MS.gene68081.t1 | AT1G16930 | 25.737 | 373 | 231 | 12 | 2 | 351 | 6 | 355 | 3.51e-15 | 76.6 |
MS.gene68081.t1 | AT1G16930 | 25.737 | 373 | 231 | 12 | 2 | 351 | 6 | 355 | 3.51e-15 | 76.6 |
MS.gene68081.t1 | AT2G29930 | 29.121 | 364 | 210 | 16 | 10 | 351 | 11 | 348 | 3.61e-15 | 76.6 |
MS.gene68081.t1 | AT2G29930 | 29.121 | 364 | 210 | 16 | 10 | 351 | 11 | 348 | 3.61e-15 | 76.6 |
MS.gene68081.t1 | AT3G44060 | 27.920 | 351 | 219 | 16 | 16 | 350 | 4 | 336 | 5.79e-15 | 75.9 |
MS.gene68081.t1 | AT3G58920 | 25.926 | 378 | 230 | 12 | 11 | 351 | 2 | 366 | 5.98e-15 | 76.3 |
MS.gene68081.t1 | AT5G22700 | 28.219 | 365 | 215 | 13 | 11 | 350 | 6 | 348 | 8.56e-15 | 75.5 |
MS.gene68081.t1 | AT5G22700 | 28.219 | 365 | 215 | 13 | 11 | 350 | 6 | 348 | 8.56e-15 | 75.5 |
MS.gene68081.t1 | AT5G22700 | 28.219 | 365 | 215 | 13 | 11 | 350 | 6 | 348 | 8.56e-15 | 75.5 |
MS.gene68081.t1 | AT5G22700 | 28.219 | 365 | 215 | 13 | 11 | 350 | 6 | 348 | 8.56e-15 | 75.5 |
MS.gene68081.t1 | AT5G62970 | 28.125 | 384 | 201 | 20 | 11 | 351 | 2 | 353 | 1.09e-14 | 75.1 |
MS.gene68081.t1 | AT4G26350 | 26.796 | 362 | 212 | 14 | 11 | 350 | 2 | 332 | 1.40e-14 | 74.7 |
MS.gene68081.t1 | AT1G66310 | 27.371 | 369 | 220 | 13 | 5 | 350 | 13 | 356 | 1.71e-14 | 74.7 |
MS.gene68081.t1 | AT5G22700 | 28.219 | 365 | 215 | 13 | 11 | 350 | 43 | 385 | 1.91e-14 | 74.7 |
MS.gene68081.t1 | AT4G00160 | 28.249 | 354 | 212 | 10 | 10 | 350 | 15 | 339 | 2.10e-14 | 74.3 |
MS.gene68081.t1 | AT3G52680 | 29.640 | 361 | 198 | 14 | 9 | 350 | 19 | 342 | 2.43e-14 | 73.9 |
MS.gene68081.t1 | AT3G58980 | 27.100 | 369 | 224 | 14 | 11 | 351 | 2 | 353 | 3.64e-14 | 73.9 |
MS.gene68081.t1 | AT3G52680 | 29.640 | 361 | 198 | 14 | 9 | 350 | 19 | 342 | 3.84e-14 | 73.6 |
MS.gene68081.t1 | AT5G18780 | 26.243 | 362 | 226 | 14 | 9 | 351 | 9 | 348 | 4.00e-14 | 73.6 |
MS.gene68081.t1 | AT5G18780 | 26.243 | 362 | 226 | 14 | 9 | 351 | 9 | 348 | 4.00e-14 | 73.6 |
MS.gene68081.t1 | AT4G15060 | 26.486 | 370 | 216 | 17 | 8 | 351 | 23 | 362 | 4.19e-14 | 73.6 |
MS.gene68081.t1 | AT3G42770 | 29.316 | 307 | 176 | 12 | 16 | 299 | 4 | 292 | 7.10e-14 | 73.2 |
MS.gene68081.t1 | AT5G18770 | 26.648 | 364 | 228 | 12 | 4 | 346 | 17 | 362 | 7.79e-14 | 72.4 |
MS.gene68081.t1 | AT5G44490 | 27.467 | 375 | 218 | 15 | 6 | 350 | 12 | 362 | 8.11e-14 | 72.8 |
MS.gene68081.t1 | AT5G44490 | 27.467 | 375 | 218 | 15 | 6 | 350 | 12 | 362 | 8.88e-14 | 72.8 |
MS.gene68081.t1 | AT5G18780 | 26.039 | 361 | 226 | 14 | 9 | 350 | 9 | 347 | 1.09e-13 | 72.0 |
MS.gene68081.t1 | AT5G18780 | 26.039 | 361 | 226 | 14 | 9 | 350 | 9 | 347 | 1.09e-13 | 72.0 |
MS.gene68081.t1 | AT5G41630 | 25.515 | 388 | 225 | 13 | 9 | 351 | 10 | 378 | 1.16e-13 | 72.0 |
MS.gene68081.t1 | AT3G49150 | 25.208 | 361 | 239 | 11 | 10 | 351 | 15 | 363 | 1.30e-13 | 72.0 |
MS.gene68081.t1 | AT3G26930 | 28.492 | 358 | 219 | 14 | 2 | 350 | 12 | 341 | 1.33e-13 | 72.0 |
MS.gene68081.t1 | AT3G59240 | 26.722 | 363 | 229 | 13 | 10 | 351 | 7 | 353 | 1.88e-13 | 71.6 |
MS.gene68081.t1 | AT3G03030 | 36.364 | 143 | 80 | 3 | 11 | 143 | 2 | 143 | 2.00e-13 | 70.9 |
MS.gene68081.t1 | AT5G18770 | 26.741 | 359 | 224 | 12 | 9 | 346 | 22 | 362 | 2.15e-13 | 71.2 |
MS.gene68081.t1 | AT3G58900 | 26.455 | 378 | 221 | 12 | 11 | 351 | 2 | 359 | 3.01e-13 | 70.9 |
MS.gene68081.t1 | AT3G58880 | 25.806 | 372 | 223 | 11 | 11 | 351 | 3 | 352 | 4.35e-13 | 70.5 |
MS.gene68081.t1 | AT3G58930 | 24.675 | 385 | 229 | 11 | 11 | 351 | 2 | 369 | 6.99e-13 | 69.7 |
MS.gene68081.t1 | AT3G58930 | 24.675 | 385 | 229 | 11 | 11 | 351 | 2 | 369 | 6.99e-13 | 69.7 |
MS.gene68081.t1 | AT3G58930 | 24.675 | 385 | 229 | 11 | 11 | 351 | 2 | 369 | 6.99e-13 | 69.7 |
MS.gene68081.t1 | AT5G15620 | 26.184 | 359 | 229 | 11 | 11 | 351 | 2 | 342 | 7.74e-13 | 69.7 |
MS.gene68081.t1 | AT3G26922 | 27.740 | 292 | 190 | 10 | 9 | 295 | 12 | 287 | 8.28e-13 | 68.6 |
MS.gene68081.t1 | AT3G26922 | 27.740 | 292 | 190 | 10 | 9 | 295 | 12 | 287 | 8.28e-13 | 68.6 |
MS.gene68081.t1 | AT4G15060 | 27.215 | 316 | 179 | 15 | 9 | 298 | 170 | 460 | 9.58e-13 | 69.7 |
MS.gene68081.t1 | AT5G22730 | 26.301 | 365 | 229 | 14 | 10 | 350 | 27 | 375 | 9.76e-13 | 68.9 |
MS.gene68081.t1 | AT5G22730 | 26.301 | 365 | 229 | 14 | 10 | 350 | 27 | 375 | 1.08e-12 | 69.3 |
MS.gene68081.t1 | AT5G22730 | 26.301 | 365 | 229 | 14 | 10 | 350 | 27 | 375 | 1.08e-12 | 69.3 |
MS.gene68081.t1 | AT3G49030 | 27.759 | 299 | 187 | 12 | 10 | 298 | 20 | 299 | 1.18e-12 | 68.9 |
MS.gene68081.t1 | AT4G10410 | 26.807 | 332 | 156 | 12 | 25 | 349 | 1 | 252 | 1.31e-12 | 67.4 |
MS.gene68081.t1 | AT2G29910 | 25.815 | 368 | 215 | 13 | 10 | 339 | 4 | 351 | 1.34e-12 | 68.6 |
MS.gene68081.t1 | AT2G29910 | 25.815 | 368 | 215 | 13 | 10 | 339 | 4 | 351 | 1.34e-12 | 68.6 |
MS.gene68081.t1 | AT2G29910 | 25.815 | 368 | 215 | 13 | 10 | 339 | 4 | 351 | 1.34e-12 | 68.6 |
MS.gene68081.t1 | AT2G29910 | 25.815 | 368 | 215 | 13 | 10 | 339 | 4 | 351 | 1.34e-12 | 68.6 |
MS.gene68081.t1 | AT2G29910 | 25.815 | 368 | 215 | 13 | 10 | 339 | 28 | 375 | 1.47e-12 | 68.6 |
MS.gene68081.t1 | AT4G03220 | 25.882 | 340 | 215 | 12 | 11 | 319 | 24 | 357 | 1.96e-12 | 68.6 |
MS.gene68081.t1 | AT3G59000 | 25.722 | 381 | 221 | 14 | 11 | 351 | 2 | 360 | 2.15e-12 | 68.6 |
MS.gene68081.t1 | AT3G60040 | 27.321 | 377 | 215 | 15 | 10 | 351 | 12 | 364 | 2.29e-12 | 68.6 |
MS.gene68081.t1 | AT5G50270 | 26.062 | 353 | 228 | 13 | 11 | 351 | 2 | 333 | 2.37e-12 | 68.2 |
MS.gene68081.t1 | AT3G60040 | 27.321 | 377 | 215 | 15 | 10 | 351 | 229 | 581 | 2.47e-12 | 68.6 |
MS.gene68081.t1 | AT3G60040 | 27.321 | 377 | 215 | 15 | 10 | 351 | 231 | 583 | 2.63e-12 | 68.6 |
MS.gene68081.t1 | AT5G27750 | 25.000 | 380 | 227 | 12 | 11 | 351 | 5 | 365 | 2.73e-12 | 68.2 |
MS.gene68081.t1 | AT3G60040 | 27.321 | 377 | 215 | 15 | 10 | 351 | 232 | 584 | 2.92e-12 | 68.6 |
MS.gene68081.t1 | AT3G60040 | 27.321 | 377 | 215 | 15 | 10 | 351 | 231 | 583 | 2.97e-12 | 68.2 |
MS.gene68081.t1 | AT4G13985 | 25.995 | 377 | 234 | 15 | 1 | 350 | 9 | 367 | 3.21e-12 | 67.8 |
MS.gene68081.t1 | AT2G29910 | 26.453 | 344 | 204 | 11 | 10 | 322 | 4 | 329 | 3.90e-12 | 67.0 |
MS.gene68081.t1 | AT2G29910 | 26.453 | 344 | 204 | 11 | 10 | 322 | 4 | 329 | 3.90e-12 | 67.0 |
MS.gene68081.t1 | AT5G27750 | 25.066 | 379 | 226 | 12 | 11 | 350 | 5 | 364 | 4.65e-12 | 67.0 |
MS.gene68081.t1 | AT1G32375 | 25.490 | 357 | 219 | 13 | 11 | 350 | 2 | 328 | 4.67e-12 | 67.0 |
MS.gene68081.t1 | AT1G32375 | 25.490 | 357 | 219 | 13 | 11 | 350 | 2 | 328 | 4.67e-12 | 67.0 |
MS.gene68081.t1 | AT1G60400 | 25.843 | 356 | 231 | 12 | 11 | 351 | 14 | 351 | 4.93e-12 | 67.0 |
MS.gene68081.t1 | AT5G22610 | 27.027 | 370 | 212 | 15 | 3 | 351 | 10 | 342 | 5.17e-12 | 67.0 |
MS.gene68081.t1 | AT1G66290 | 27.419 | 372 | 216 | 17 | 6 | 351 | 24 | 367 | 6.19e-12 | 67.0 |
MS.gene68081.t1 | AT3G54910 | 31.140 | 228 | 138 | 8 | 77 | 300 | 29 | 241 | 6.32e-12 | 66.6 |
MS.gene68081.t1 | AT3G54910 | 31.140 | 228 | 138 | 8 | 77 | 300 | 29 | 241 | 6.32e-12 | 66.6 |
MS.gene68081.t1 | AT3G54910 | 31.140 | 228 | 138 | 8 | 77 | 300 | 29 | 241 | 6.32e-12 | 66.6 |
MS.gene68081.t1 | AT1G69630 | 25.798 | 376 | 227 | 16 | 4 | 351 | 11 | 362 | 8.02e-12 | 66.6 |
MS.gene68081.t1 | AT3G51530 | 27.557 | 352 | 213 | 12 | 10 | 350 | 29 | 349 | 8.85e-12 | 66.2 |
MS.gene68081.t1 | AT1G66300 | 25.737 | 373 | 225 | 13 | 5 | 350 | 23 | 370 | 1.06e-11 | 66.2 |
MS.gene68081.t1 | AT4G13965 | 28.451 | 355 | 206 | 18 | 9 | 350 | 8 | 327 | 1.12e-11 | 65.9 |
MS.gene68081.t1 | AT5G56690 | 26.648 | 349 | 224 | 12 | 13 | 350 | 4 | 331 | 1.26e-11 | 65.9 |
MS.gene68081.t1 | AT5G22660 | 25.410 | 366 | 228 | 13 | 10 | 351 | 12 | 356 | 1.45e-11 | 65.9 |
MS.gene68081.t1 | AT1G13780 | 26.203 | 374 | 224 | 15 | 11 | 351 | 10 | 364 | 1.65e-11 | 65.5 |
MS.gene68081.t1 | AT5G38392 | 33.010 | 206 | 113 | 6 | 11 | 200 | 2 | 198 | 1.74e-11 | 63.5 |
MS.gene68081.t1 | AT5G50270 | 28.340 | 247 | 159 | 9 | 11 | 249 | 2 | 238 | 2.51e-11 | 64.3 |
MS.gene68081.t1 | AT5G22610 | 26.963 | 382 | 227 | 16 | 3 | 351 | 10 | 372 | 3.02e-11 | 65.1 |
MS.gene68081.t1 | AT5G56810 | 28.854 | 253 | 145 | 9 | 11 | 247 | 15 | 248 | 3.82e-11 | 63.9 |
MS.gene68081.t1 | AT5G56810 | 28.854 | 253 | 145 | 9 | 11 | 247 | 15 | 248 | 4.24e-11 | 64.3 |
MS.gene68081.t1 | AT5G22670 | 25.806 | 372 | 235 | 12 | 1 | 351 | 1 | 352 | 6.02e-11 | 63.9 |
Find 59 sgRNAs with CRISPR-Local
Find 65 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCACAATTTATCATCTTTA+TGG | 0.083639 | 1.1:+66582538 | MS.gene68081:CDS |
CAAGGTTGAGGAACTTGAAT+TGG | 0.292646 | 1.1:+66581835 | MS.gene68081:CDS |
TAGAGTTGAACACAATAAAT+TGG | 0.294013 | 1.1:-66582006 | None:intergenic |
TCACAATTTATCATCTTTAT+GGG | 0.300522 | 1.1:+66582539 | MS.gene68081:CDS |
ATGGCAAGATCCCTAAGTTT+TGG | 0.321820 | 1.1:-66582618 | None:intergenic |
AAAGTCAAGGTTGGGGATCT+TGG | 0.348543 | 1.1:-66581651 | None:intergenic |
GGTAATTCAAAGTCAAGGTT+GGG | 0.367483 | 1.1:-66581659 | None:intergenic |
GCTCGTGGTCTTAAAATTGC+GGG | 0.380788 | 1.1:+66581916 | MS.gene68081:CDS |
AGTTTGTATTCACTCTTAAG+AGG | 0.386556 | 1.1:+66582340 | MS.gene68081:CDS |
AGCCTAAGGGGCAATAAGAT+TGG | 0.402731 | 1.1:-66581878 | None:intergenic |
TTTACATGACTGCATGAAAC+AGG | 0.406869 | 1.1:+66582099 | MS.gene68081:CDS |
AAATATCCGAAAATTGTTGT+TGG | 0.407540 | 1.1:+66582565 | MS.gene68081:CDS |
GACATAGGGTCTGTAGTCTT+TGG | 0.423895 | 1.1:-66581680 | None:intergenic |
ATCTTGATCTTCATCAGATT+CGG | 0.426913 | 1.1:-66581519 | None:intergenic |
AAGAGTAGCTCGATTGAGAT+TGG | 0.434112 | 1.1:-66582290 | None:intergenic |
GACCACGAGCGACTTAGAAA+TGG | 0.441343 | 1.1:-66581903 | None:intergenic |
ACCATATGATATGCACTTGT+GGG | 0.445487 | 1.1:+66581793 | MS.gene68081:CDS |
TACAGAATGCTCCAAAACTT+AGG | 0.453885 | 1.1:+66582607 | MS.gene68081:CDS |
ACAGAATGCTCCAAAACTTA+GGG | 0.466812 | 1.1:+66582608 | MS.gene68081:CDS |
AGGAACTTGAATTGGATTGT+TGG | 0.484585 | 1.1:+66581843 | MS.gene68081:CDS |
ACCCACAAGTGCATATCATA+TGG | 0.486209 | 1.1:-66581794 | None:intergenic |
ACTTAGGGATCTTGCCATTG+AGG | 0.495226 | 1.1:+66582623 | MS.gene68081:CDS |
TGGTAATTCAAAGTCAAGGT+TGG | 0.495646 | 1.1:-66581660 | None:intergenic |
AATTTGCACTGGACAAATGT+TGG | 0.499634 | 1.1:-66582191 | None:intergenic |
TTGATTGCTTTGAACGACAT+AGG | 0.500776 | 1.1:-66581695 | None:intergenic |
AATGAATACTCTCTTTAATG+AGG | 0.503823 | 1.1:-66582143 | None:intergenic |
TGATTGCTTTGAACGACATA+GGG | 0.506092 | 1.1:-66581694 | None:intergenic |
CAAATGTTGGACTCAACAAA+AGG | 0.508165 | 1.1:-66582178 | None:intergenic |
ACTTAGAAATGGAAAGCCTA+AGG | 0.512993 | 1.1:-66581892 | None:intergenic |
TACGAAGAACTTCAAGTGAT+GGG | 0.516752 | 1.1:-66582219 | None:intergenic |
AACCAATCTTATTGCCCCTT+AGG | 0.520921 | 1.1:+66581876 | MS.gene68081:CDS |
TTGTAGATAGAACACTTGTT+CGG | 0.523361 | 1.1:-66581610 | None:intergenic |
GATGGGGCATTAATTTGCAC+TGG | 0.524036 | 1.1:-66582202 | None:intergenic |
CAAGTGTTCTATCTACAAGA+TGG | 0.524434 | 1.1:+66581615 | MS.gene68081:CDS |
ATCTCGTTGTCGACATCTTG+AGG | 0.524833 | 1.1:+66582069 | MS.gene68081:CDS |
TGAACACAATAAATTGGAGC+TGG | 0.528466 | 1.1:-66582000 | None:intergenic |
AGCATTAGACCTCAAGGTTG+AGG | 0.528928 | 1.1:+66581823 | MS.gene68081:CDS |
TTCAAAAGCATTAGACCTCA+AGG | 0.530430 | 1.1:+66581817 | MS.gene68081:CDS |
CCGAAAACTTAAGAAAACTA+AGG | 0.530981 | 1.1:+66581747 | MS.gene68081:CDS |
TCTTCGCATTTCTAAGCATG+TGG | 0.534563 | 1.1:+66582309 | MS.gene68081:CDS |
AATATTCATACACACCTCAA+TGG | 0.541265 | 1.1:-66582637 | None:intergenic |
CGCTCGTGGTCTTAAAATTG+CGG | 0.545262 | 1.1:+66581915 | MS.gene68081:CDS |
GTAATTCAAAGTCAAGGTTG+GGG | 0.549481 | 1.1:-66581658 | None:intergenic |
CTTAGAAATGGAAAGCCTAA+GGG | 0.556919 | 1.1:-66581891 | None:intergenic |
TTCCATTTCTAAGTCGCTCG+TGG | 0.557905 | 1.1:+66581901 | MS.gene68081:CDS |
CACCATATGATATGCACTTG+TGG | 0.561872 | 1.1:+66581792 | MS.gene68081:CDS |
CTAAGGCTCTATAGTGACAA+TGG | 0.568620 | 1.1:+66581764 | MS.gene68081:CDS |
ATGAATACTCTCTTTAATGA+GGG | 0.572741 | 1.1:-66582142 | None:intergenic |
CAATAAGATTGGTTTCTCGA+TGG | 0.573973 | 1.1:-66581867 | None:intergenic |
AAGTGTTCTATCTACAAGAT+GGG | 0.574630 | 1.1:+66581616 | MS.gene68081:CDS |
AGCTGGAGAATCTTTAGTGA+CGG | 0.576222 | 1.1:-66581983 | None:intergenic |
TATTGTGTTCAACTCTATCG+TGG | 0.590909 | 1.1:+66582012 | MS.gene68081:CDS |
ATACGAAGAACTTCAAGTGA+TGG | 0.594324 | 1.1:-66582220 | None:intergenic |
ATTCAAGTTCCTCAACCTTG+AGG | 0.595725 | 1.1:-66581832 | None:intergenic |
TCTTTGGTAATTCAAAGTCA+AGG | 0.608733 | 1.1:-66581664 | None:intergenic |
TTAGAAATGGAAAGCCTAAG+GGG | 0.656773 | 1.1:-66581890 | None:intergenic |
CTCGTGGTCTTAAAATTGCG+GGG | 0.659340 | 1.1:+66581917 | MS.gene68081:CDS |
ACGAAGAACTTCAAGTGATG+GGG | 0.661138 | 1.1:-66582218 | None:intergenic |
TATGCAGTTTCTAAGCATGG+AGG | 0.674218 | 1.1:+66582485 | MS.gene68081:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTGTAAACTTATATTTTCT+GGG | - | chr1.1:66582265-66582284 | None:intergenic | 15.0% |
!! | TCACAATTTATCATCTTTAT+GGG | + | chr1.1:66582539-66582558 | MS.gene68081:CDS | 20.0% |
!! | TGCATATGAGTAAATAAATA+TGG | - | chr1.1:66582452-66582471 | None:intergenic | 20.0% |
!! | TTCACAATTTATCATCTTTA+TGG | + | chr1.1:66582538-66582557 | MS.gene68081:CDS | 20.0% |
!!! | GTTTGTAAACTTATATTTTC+TGG | - | chr1.1:66582266-66582285 | None:intergenic | 20.0% |
! | AAATATCCGAAAATTGTTGT+TGG | + | chr1.1:66582565-66582584 | MS.gene68081:CDS | 25.0% |
! | AATGAATACTCTCTTTAATG+AGG | - | chr1.1:66582146-66582165 | None:intergenic | 25.0% |
! | ATGAATACTCTCTTTAATGA+GGG | - | chr1.1:66582145-66582164 | None:intergenic | 25.0% |
! | TAGAGTTGAACACAATAAAT+TGG | - | chr1.1:66582009-66582028 | None:intergenic | 25.0% |
!!! | CCTTAGTTTTCTTAAGTTTT+CGG | - | chr1.1:66581750-66581769 | None:intergenic | 25.0% |
AAGTGTTCTATCTACAAGAT+GGG | + | chr1.1:66581616-66581635 | MS.gene68081:CDS | 30.0% | |
AGTTTGTATTCACTCTTAAG+AGG | + | chr1.1:66582340-66582359 | MS.gene68081:CDS | 30.0% | |
ATCTTGATCTTCATCAGATT+CGG | - | chr1.1:66581522-66581541 | None:intergenic | 30.0% | |
CCGAAAACTTAAGAAAACTA+AGG | + | chr1.1:66581747-66581766 | MS.gene68081:CDS | 30.0% | |
TTGTAGATAGAACACTTGTT+CGG | - | chr1.1:66581613-66581632 | None:intergenic | 30.0% | |
! | CACATTCCAACAACAATTTT+CGG | - | chr1.1:66582574-66582593 | None:intergenic | 30.0% |
! | TCTTTGGTAATTCAAAGTCA+AGG | - | chr1.1:66581667-66581686 | None:intergenic | 30.0% |
! | TTTTATGCAGTTTCTAAGCA+TGG | + | chr1.1:66582482-66582501 | MS.gene68081:intron | 30.0% |
AATTTGCACTGGACAAATGT+TGG | - | chr1.1:66582194-66582213 | None:intergenic | 35.0% | |
ACAGAATGCTCCAAAACTTA+GGG | + | chr1.1:66582608-66582627 | MS.gene68081:CDS | 35.0% | |
ACCATATGATATGCACTTGT+GGG | + | chr1.1:66581793-66581812 | MS.gene68081:CDS | 35.0% | |
ACTTAGAAATGGAAAGCCTA+AGG | - | chr1.1:66581895-66581914 | None:intergenic | 35.0% | |
AGGAACTTGAATTGGATTGT+TGG | + | chr1.1:66581843-66581862 | MS.gene68081:CDS | 35.0% | |
ATACGAAGAACTTCAAGTGA+TGG | - | chr1.1:66582223-66582242 | None:intergenic | 35.0% | |
CAAATGTTGGACTCAACAAA+AGG | - | chr1.1:66582181-66582200 | None:intergenic | 35.0% | |
CAAGTGTTCTATCTACAAGA+TGG | + | chr1.1:66581615-66581634 | MS.gene68081:CDS | 35.0% | |
CTTAGAAATGGAAAGCCTAA+GGG | - | chr1.1:66581894-66581913 | None:intergenic | 35.0% | |
GGTAATTCAAAGTCAAGGTT+GGG | - | chr1.1:66581662-66581681 | None:intergenic | 35.0% | |
GTAATTCAAAGTCAAGGTTG+GGG | - | chr1.1:66581661-66581680 | None:intergenic | 35.0% | |
TACAGAATGCTCCAAAACTT+AGG | + | chr1.1:66582607-66582626 | MS.gene68081:CDS | 35.0% | |
TACGAAGAACTTCAAGTGAT+GGG | - | chr1.1:66582222-66582241 | None:intergenic | 35.0% | |
TATTGTGTTCAACTCTATCG+TGG | + | chr1.1:66582012-66582031 | MS.gene68081:CDS | 35.0% | |
TGAACACAATAAATTGGAGC+TGG | - | chr1.1:66582003-66582022 | None:intergenic | 35.0% | |
TGGTAATTCAAAGTCAAGGT+TGG | - | chr1.1:66581663-66581682 | None:intergenic | 35.0% | |
TTAGAAATGGAAAGCCTAAG+GGG | - | chr1.1:66581893-66581912 | None:intergenic | 35.0% | |
TTTACATGACTGCATGAAAC+AGG | + | chr1.1:66582099-66582118 | MS.gene68081:CDS | 35.0% | |
! | TGATTGCTTTGAACGACATA+GGG | - | chr1.1:66581697-66581716 | None:intergenic | 35.0% |
! | TTGATTGCTTTGAACGACAT+AGG | - | chr1.1:66581698-66581717 | None:intergenic | 35.0% |
!! | CAATAAGATTGGTTTCTCGA+TGG | - | chr1.1:66581870-66581889 | None:intergenic | 35.0% |
!! | TTCAAAAGCATTAGACCTCA+AGG | + | chr1.1:66581817-66581836 | MS.gene68081:CDS | 35.0% |
AACCAATCTTATTGCCCCTT+AGG | + | chr1.1:66581876-66581895 | MS.gene68081:CDS | 40.0% | |
AAGAGTAGCTCGATTGAGAT+TGG | - | chr1.1:66582293-66582312 | None:intergenic | 40.0% | |
ACCCACAAGTGCATATCATA+TGG | - | chr1.1:66581797-66581816 | None:intergenic | 40.0% | |
ACGAAGAACTTCAAGTGATG+GGG | - | chr1.1:66582221-66582240 | None:intergenic | 40.0% | |
AGCTGGAGAATCTTTAGTGA+CGG | - | chr1.1:66581986-66582005 | None:intergenic | 40.0% | |
CAAGGTTGAGGAACTTGAAT+TGG | + | chr1.1:66581835-66581854 | MS.gene68081:CDS | 40.0% | |
CACCATATGATATGCACTTG+TGG | + | chr1.1:66581792-66581811 | MS.gene68081:CDS | 40.0% | |
CTAAGGCTCTATAGTGACAA+TGG | + | chr1.1:66581764-66581783 | MS.gene68081:CDS | 40.0% | |
TATGCAGTTTCTAAGCATGG+AGG | + | chr1.1:66582485-66582504 | MS.gene68081:intron | 40.0% | |
TCTTCGCATTTCTAAGCATG+TGG | + | chr1.1:66582309-66582328 | MS.gene68081:CDS | 40.0% | |
! | ATGGCAAGATCCCTAAGTTT+TGG | - | chr1.1:66582621-66582640 | None:intergenic | 40.0% |
! | ATTCAAGTTCCTCAACCTTG+AGG | - | chr1.1:66581835-66581854 | None:intergenic | 40.0% |
!! | GGTAAGACTCTTTTGTTGTC+AGG | - | chr1.1:66581592-66581611 | None:intergenic | 40.0% |
!! | TTAAGTTTTCGGTGCGTCTT+AGG | - | chr1.1:66581739-66581758 | None:intergenic | 40.0% |
AAAGTCAAGGTTGGGGATCT+TGG | - | chr1.1:66581654-66581673 | None:intergenic | 45.0% | |
AGCATTAGACCTCAAGGTTG+AGG | + | chr1.1:66581823-66581842 | MS.gene68081:CDS | 45.0% | |
AGCCTAAGGGGCAATAAGAT+TGG | - | chr1.1:66581881-66581900 | None:intergenic | 45.0% | |
ATCTCGTTGTCGACATCTTG+AGG | + | chr1.1:66582069-66582088 | MS.gene68081:CDS | 45.0% | |
GACATAGGGTCTGTAGTCTT+TGG | - | chr1.1:66581683-66581702 | None:intergenic | 45.0% | |
TTCCATTTCTAAGTCGCTCG+TGG | + | chr1.1:66581901-66581920 | MS.gene68081:CDS | 45.0% | |
! | CGCTCGTGGTCTTAAAATTG+CGG | + | chr1.1:66581915-66581934 | MS.gene68081:CDS | 45.0% |
! | CTCGTGGTCTTAAAATTGCG+GGG | + | chr1.1:66581917-66581936 | MS.gene68081:CDS | 45.0% |
! | GCTCGTGGTCTTAAAATTGC+GGG | + | chr1.1:66581916-66581935 | MS.gene68081:CDS | 45.0% |
!! | GATGGGGCATTAATTTGCAC+TGG | - | chr1.1:66582205-66582224 | None:intergenic | 45.0% |
GACCACGAGCGACTTAGAAA+TGG | - | chr1.1:66581906-66581925 | None:intergenic | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 66581509 | 66582644 | 66581509 | ID=MS.gene68081 |
chr1.1 | mRNA | 66581509 | 66582644 | 66581509 | ID=MS.gene68081.t1;Parent=MS.gene68081 |
chr1.1 | exon | 66581509 | 66582408 | 66581509 | ID=MS.gene68081.t1.exon1;Parent=MS.gene68081.t1 |
chr1.1 | CDS | 66581509 | 66582408 | 66581509 | ID=cds.MS.gene68081.t1;Parent=MS.gene68081.t1 |
chr1.1 | exon | 66582492 | 66582644 | 66582492 | ID=MS.gene68081.t1.exon2;Parent=MS.gene68081.t1 |
chr1.1 | CDS | 66582492 | 66582644 | 66582492 | ID=cds.MS.gene68081.t1;Parent=MS.gene68081.t1 |
Gene Sequence |
Protein sequence |