Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60520.t1 | KEH43359.1 | 71.4 | 346 | 97 | 1 | 6 | 351 | 14 | 357 | 1.10E-133 | 486.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60520.t1 | Q8L7H1 | 29.0 | 369 | 215 | 12 | 10 | 351 | 7 | 355 | 2.0e-25 | 118.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60520.t1 | A0A072VN11 | 71.4 | 346 | 97 | 1 | 6 | 351 | 14 | 357 | 8.3e-134 | 486.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60520.t1 | MTR_1g090883 | 71.143 | 350 | 97 | 2 | 2 | 351 | 12 | 357 | 3.92e-172 | 485 |
| MS.gene60520.t1 | MTR_4g056040 | 60.957 | 397 | 120 | 5 | 1 | 367 | 1 | 392 | 3.45e-149 | 432 |
| MS.gene60520.t1 | MTR_4g056020 | 62.784 | 352 | 127 | 3 | 1 | 352 | 1 | 348 | 7.00e-141 | 409 |
| MS.gene60520.t1 | MTR_4g056030 | 62.216 | 352 | 129 | 3 | 1 | 352 | 1 | 348 | 4.66e-138 | 402 |
| MS.gene60520.t1 | MTR_1g038710 | 64.407 | 354 | 116 | 5 | 1 | 348 | 11 | 360 | 1.86e-137 | 400 |
| MS.gene60520.t1 | MTR_4g056070 | 57.248 | 407 | 129 | 6 | 1 | 367 | 1 | 402 | 2.38e-135 | 394 |
| MS.gene60520.t1 | MTR_4g055990 | 57.106 | 387 | 125 | 5 | 1 | 350 | 1 | 383 | 1.44e-128 | 379 |
| MS.gene60520.t1 | MTR_4g055990 | 57.106 | 387 | 125 | 5 | 1 | 350 | 1 | 383 | 1.53e-128 | 379 |
| MS.gene60520.t1 | MTR_4g055580 | 56.555 | 389 | 127 | 5 | 1 | 352 | 92 | 475 | 1.31e-122 | 367 |
| MS.gene60520.t1 | MTR_1g090900 | 89.888 | 178 | 18 | 0 | 1 | 178 | 1 | 178 | 2.47e-111 | 324 |
| MS.gene60520.t1 | MTR_4g093690 | 57.565 | 271 | 98 | 10 | 7 | 270 | 14 | 274 | 3.95e-80 | 247 |
| MS.gene60520.t1 | MTR_7g110920 | 52.964 | 253 | 80 | 3 | 101 | 351 | 1 | 216 | 3.74e-72 | 228 |
| MS.gene60520.t1 | MTR_4g056010 | 66.667 | 96 | 31 | 1 | 72 | 167 | 3 | 97 | 2.68e-32 | 117 |
| MS.gene60520.t1 | MTR_4g080590 | 28.375 | 363 | 214 | 13 | 10 | 350 | 22 | 360 | 2.05e-20 | 92.0 |
| MS.gene60520.t1 | MTR_4g080590 | 27.368 | 380 | 232 | 12 | 10 | 368 | 22 | 378 | 2.43e-20 | 92.8 |
| MS.gene60520.t1 | MTR_8g445780 | 28.841 | 371 | 207 | 14 | 9 | 354 | 11 | 349 | 1.02e-18 | 87.4 |
| MS.gene60520.t1 | MTR_8g467800 | 30.894 | 369 | 203 | 15 | 4 | 348 | 13 | 353 | 6.47e-18 | 85.5 |
| MS.gene60520.t1 | MTR_5g084070 | 27.692 | 390 | 248 | 12 | 5 | 385 | 7 | 371 | 8.34e-18 | 85.1 |
| MS.gene60520.t1 | MTR_8g014260 | 27.506 | 389 | 226 | 15 | 8 | 363 | 13 | 378 | 1.06e-17 | 84.7 |
| MS.gene60520.t1 | MTR_4g056020 | 78.000 | 50 | 11 | 0 | 301 | 350 | 1 | 50 | 1.23e-17 | 80.1 |
| MS.gene60520.t1 | MTR_8g467800 | 30.484 | 351 | 192 | 15 | 4 | 332 | 13 | 333 | 5.76e-17 | 81.6 |
| MS.gene60520.t1 | MTR_7g007080 | 34.500 | 200 | 107 | 6 | 9 | 196 | 2 | 189 | 8.22e-17 | 81.6 |
| MS.gene60520.t1 | MTR_1g041245 | 32.456 | 228 | 136 | 6 | 1 | 219 | 1 | 219 | 1.55e-16 | 80.9 |
| MS.gene60520.t1 | MTR_6g011460 | 30.800 | 250 | 137 | 11 | 11 | 246 | 46 | 273 | 2.21e-16 | 80.5 |
| MS.gene60520.t1 | MTR_5g080710 | 32.836 | 268 | 160 | 8 | 7 | 270 | 29 | 280 | 3.13e-16 | 80.5 |
| MS.gene60520.t1 | MTR_7g055943 | 25.706 | 354 | 183 | 12 | 11 | 352 | 40 | 325 | 4.47e-16 | 79.7 |
| MS.gene60520.t1 | MTR_4g039440 | 27.684 | 354 | 180 | 16 | 11 | 354 | 34 | 321 | 5.13e-16 | 79.3 |
| MS.gene60520.t1 | MTR_3g108560 | 32.174 | 230 | 137 | 6 | 8 | 234 | 17 | 230 | 1.69e-15 | 77.0 |
| MS.gene60520.t1 | MTR_3g099900 | 26.786 | 336 | 208 | 14 | 8 | 325 | 15 | 330 | 2.47e-15 | 77.4 |
| MS.gene60520.t1 | MTR_4g050930 | 27.844 | 334 | 207 | 10 | 9 | 326 | 27 | 342 | 2.94e-15 | 77.0 |
| MS.gene60520.t1 | MTR_3g108560 | 32.174 | 230 | 137 | 6 | 8 | 234 | 17 | 230 | 3.04e-15 | 77.0 |
| MS.gene60520.t1 | MTR_8g468840 | 29.154 | 319 | 194 | 12 | 10 | 309 | 13 | 318 | 4.44e-15 | 77.0 |
| MS.gene60520.t1 | MTR_4g050930 | 27.844 | 334 | 207 | 10 | 9 | 326 | 27 | 342 | 4.89e-15 | 77.0 |
| MS.gene60520.t1 | MTR_2g005990 | 30.348 | 201 | 117 | 5 | 11 | 195 | 6 | 199 | 5.87e-15 | 76.3 |
| MS.gene60520.t1 | MTR_7g034115 | 35.979 | 189 | 108 | 6 | 11 | 195 | 11 | 190 | 8.24e-15 | 75.5 |
| MS.gene60520.t1 | MTR_7g032380 | 29.956 | 227 | 138 | 5 | 1 | 222 | 1 | 211 | 8.56e-15 | 75.5 |
| MS.gene60520.t1 | MTR_5g039950 | 27.809 | 356 | 193 | 13 | 10 | 350 | 22 | 328 | 1.34e-14 | 75.1 |
| MS.gene60520.t1 | MTR_1g085120 | 27.733 | 375 | 155 | 18 | 11 | 353 | 179 | 469 | 1.53e-14 | 75.1 |
| MS.gene60520.t1 | MTR_1g085120 | 27.614 | 373 | 156 | 17 | 11 | 352 | 92 | 381 | 1.83e-14 | 75.1 |
| MS.gene60520.t1 | MTR_1g085120 | 27.540 | 374 | 155 | 17 | 11 | 352 | 167 | 456 | 1.90e-14 | 75.1 |
| MS.gene60520.t1 | MTR_7g033945 | 32.768 | 177 | 104 | 4 | 1 | 167 | 1 | 172 | 3.96e-14 | 70.5 |
| MS.gene60520.t1 | MTR_7g056277 | 26.667 | 360 | 183 | 13 | 7 | 357 | 255 | 542 | 5.49e-14 | 73.9 |
| MS.gene60520.t1 | MTR_7g056287 | 27.451 | 357 | 176 | 15 | 11 | 357 | 3 | 286 | 1.28e-13 | 72.0 |
| MS.gene60520.t1 | MTR_8g062270 | 28.453 | 362 | 214 | 14 | 11 | 348 | 16 | 356 | 1.33e-13 | 72.4 |
| MS.gene60520.t1 | MTR_4g045680 | 26.549 | 339 | 205 | 13 | 9 | 324 | 14 | 331 | 2.32e-13 | 71.2 |
| MS.gene60520.t1 | MTR_6g022360 | 31.148 | 244 | 125 | 12 | 11 | 235 | 43 | 262 | 2.87e-13 | 71.2 |
| MS.gene60520.t1 | MTR_3g048290 | 27.248 | 367 | 232 | 12 | 7 | 350 | 19 | 373 | 2.88e-13 | 71.2 |
| MS.gene60520.t1 | MTR_8g066650 | 25.223 | 337 | 218 | 11 | 8 | 328 | 77 | 395 | 3.70e-13 | 70.9 |
| MS.gene60520.t1 | MTR_2g007500 | 31.915 | 235 | 123 | 8 | 4 | 222 | 7 | 220 | 4.12e-13 | 70.1 |
| MS.gene60520.t1 | MTR_4g130200 | 27.066 | 351 | 183 | 14 | 10 | 353 | 19 | 303 | 5.18e-13 | 70.1 |
| MS.gene60520.t1 | MTR_1g053025 | 30.000 | 240 | 131 | 11 | 11 | 230 | 2 | 224 | 5.36e-13 | 70.1 |
| MS.gene60520.t1 | MTR_7g098570 | 31.878 | 229 | 138 | 8 | 11 | 235 | 20 | 234 | 5.95e-13 | 70.5 |
| MS.gene60520.t1 | MTR_7g115270 | 32.995 | 197 | 113 | 7 | 10 | 195 | 11 | 199 | 6.88e-13 | 70.1 |
| MS.gene60520.t1 | MTR_8g085430 | 29.949 | 197 | 116 | 5 | 11 | 195 | 11 | 197 | 8.37e-13 | 69.3 |
| MS.gene60520.t1 | MTR_3g023630 | 27.429 | 350 | 173 | 13 | 11 | 351 | 8 | 285 | 8.75e-13 | 69.3 |
| MS.gene60520.t1 | MTR_4g080773 | 27.733 | 375 | 224 | 13 | 11 | 353 | 19 | 378 | 9.39e-13 | 69.7 |
| MS.gene60520.t1 | MTR_4g080773 | 27.733 | 375 | 224 | 13 | 11 | 353 | 19 | 378 | 9.45e-13 | 69.7 |
| MS.gene60520.t1 | MTR_3g014590 | 25.602 | 332 | 228 | 7 | 1 | 324 | 1 | 321 | 1.38e-12 | 68.9 |
| MS.gene60520.t1 | MTR_3g087260 | 28.061 | 392 | 192 | 15 | 9 | 350 | 10 | 361 | 1.90e-12 | 68.9 |
| MS.gene60520.t1 | MTR_2g094750 | 26.478 | 389 | 232 | 16 | 4 | 350 | 83 | 459 | 1.96e-12 | 68.9 |
| MS.gene60520.t1 | MTR_3g019240 | 28.319 | 339 | 205 | 12 | 7 | 326 | 22 | 341 | 2.05e-12 | 68.6 |
| MS.gene60520.t1 | MTR_1g048340 | 25.073 | 343 | 214 | 11 | 4 | 339 | 9 | 315 | 2.23e-12 | 67.8 |
| MS.gene60520.t1 | MTR_2g083840 | 25.868 | 317 | 203 | 10 | 11 | 309 | 21 | 323 | 2.60e-12 | 68.6 |
| MS.gene60520.t1 | MTR_4g024680 | 31.818 | 198 | 102 | 8 | 7 | 201 | 518 | 685 | 3.48e-12 | 68.6 |
| MS.gene60520.t1 | MTR_7g056447 | 35.533 | 197 | 108 | 7 | 4 | 194 | 2 | 185 | 4.35e-12 | 66.6 |
| MS.gene60520.t1 | MTR_4g081030 | 27.108 | 332 | 207 | 12 | 10 | 327 | 16 | 326 | 6.12e-12 | 67.0 |
| MS.gene60520.t1 | MTR_7g033915 | 33.333 | 153 | 90 | 3 | 1 | 143 | 1 | 151 | 6.83e-12 | 66.6 |
| MS.gene60520.t1 | MTR_0543s0010 | 31.250 | 224 | 130 | 8 | 10 | 230 | 85 | 287 | 7.59e-12 | 67.0 |
| MS.gene60520.t1 | MTR_0492s0020 | 31.250 | 224 | 130 | 8 | 10 | 230 | 85 | 287 | 7.90e-12 | 67.0 |
| MS.gene60520.t1 | MTR_6g088700 | 24.806 | 387 | 261 | 13 | 4 | 377 | 7 | 376 | 9.93e-12 | 66.2 |
| MS.gene60520.t1 | MTR_4g051480 | 26.239 | 343 | 218 | 11 | 5 | 326 | 19 | 347 | 1.07e-11 | 67.0 |
| MS.gene60520.t1 | MTR_4g092300 | 26.239 | 343 | 218 | 11 | 5 | 326 | 19 | 347 | 1.25e-11 | 66.6 |
| MS.gene60520.t1 | MTR_3g108150 | 27.684 | 354 | 184 | 15 | 10 | 358 | 12 | 298 | 1.87e-11 | 65.5 |
| MS.gene60520.t1 | MTR_6g022390 | 44.444 | 63 | 35 | 0 | 11 | 73 | 5 | 67 | 2.23e-11 | 62.0 |
| MS.gene60520.t1 | MTR_7g017280 | 26.301 | 346 | 221 | 14 | 4 | 324 | 141 | 477 | 2.24e-11 | 65.5 |
| MS.gene60520.t1 | MTR_3g014550 | 24.699 | 332 | 232 | 6 | 1 | 324 | 1 | 322 | 2.31e-11 | 65.1 |
| MS.gene60520.t1 | MTR_6g025270 | 24.309 | 362 | 235 | 10 | 6 | 346 | 29 | 372 | 2.47e-11 | 65.1 |
| MS.gene60520.t1 | MTR_7g033990 | 29.508 | 244 | 131 | 9 | 1 | 222 | 1 | 225 | 2.62e-11 | 65.1 |
| MS.gene60520.t1 | MTR_8g014160 | 28.037 | 321 | 187 | 10 | 4 | 298 | 34 | 336 | 4.03e-11 | 64.7 |
| MS.gene60520.t1 | MTR_7g023310 | 24.490 | 245 | 165 | 8 | 6 | 240 | 21 | 255 | 4.20e-11 | 64.7 |
| MS.gene60520.t1 | MTR_3g107100 | 30.144 | 209 | 122 | 9 | 1 | 199 | 1 | 195 | 4.56e-11 | 64.3 |
| MS.gene60520.t1 | MTR_3g107160 | 23.743 | 358 | 201 | 11 | 4 | 353 | 3 | 296 | 4.69e-11 | 64.3 |
| MS.gene60520.t1 | MTR_8g062310 | 31.683 | 202 | 114 | 10 | 1 | 195 | 15 | 199 | 7.30e-11 | 63.9 |
| MS.gene60520.t1 | MTR_3g023270 | 24.556 | 338 | 206 | 10 | 7 | 324 | 8 | 316 | 8.69e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60520.t1 | AT4G14103 | 29.396 | 381 | 220 | 13 | 10 | 361 | 7 | 367 | 1.89e-28 | 115 |
| MS.gene60520.t1 | AT4G14103 | 28.997 | 369 | 215 | 12 | 10 | 351 | 7 | 355 | 7.79e-28 | 113 |
| MS.gene60520.t1 | AT4G14103 | 28.997 | 369 | 215 | 12 | 10 | 351 | 7 | 355 | 7.79e-28 | 113 |
| MS.gene60520.t1 | AT4G14096 | 28.493 | 365 | 215 | 12 | 10 | 351 | 7 | 348 | 3.98e-25 | 106 |
| MS.gene60520.t1 | AT4G14096 | 28.493 | 365 | 215 | 12 | 10 | 351 | 7 | 348 | 3.98e-25 | 106 |
| MS.gene60520.t1 | AT3G59230 | 28.385 | 384 | 215 | 14 | 10 | 351 | 11 | 376 | 9.35e-24 | 103 |
| MS.gene60520.t1 | AT3G59190 | 28.533 | 375 | 220 | 10 | 10 | 351 | 11 | 370 | 5.65e-23 | 99.8 |
| MS.gene60520.t1 | AT4G09920 | 32.143 | 308 | 164 | 10 | 10 | 299 | 1 | 281 | 5.76e-23 | 98.2 |
| MS.gene60520.t1 | AT4G09920 | 32.143 | 308 | 164 | 10 | 10 | 299 | 1 | 281 | 5.76e-23 | 98.2 |
| MS.gene60520.t1 | AT4G09920 | 32.143 | 308 | 164 | 10 | 10 | 299 | 1 | 281 | 5.76e-23 | 98.2 |
| MS.gene60520.t1 | AT3G59190 | 28.533 | 375 | 220 | 10 | 10 | 351 | 11 | 370 | 9.61e-23 | 100 |
| MS.gene60520.t1 | AT5G56370 | 30.141 | 355 | 202 | 15 | 11 | 355 | 2 | 320 | 1.52e-22 | 97.4 |
| MS.gene60520.t1 | AT3G59210 | 28.533 | 375 | 220 | 11 | 7 | 351 | 3 | 359 | 1.80e-22 | 99.4 |
| MS.gene60520.t1 | AT3G59210 | 28.533 | 375 | 220 | 11 | 7 | 351 | 3 | 359 | 1.80e-22 | 99.4 |
| MS.gene60520.t1 | AT3G59210 | 28.533 | 375 | 220 | 11 | 7 | 351 | 3 | 359 | 1.80e-22 | 99.4 |
| MS.gene60520.t1 | AT3G59210 | 28.533 | 375 | 220 | 11 | 7 | 351 | 3 | 359 | 1.80e-22 | 99.4 |
| MS.gene60520.t1 | AT3G59210 | 28.533 | 375 | 220 | 11 | 7 | 351 | 3 | 359 | 1.80e-22 | 99.4 |
| MS.gene60520.t1 | AT4G09920 | 32.039 | 309 | 157 | 10 | 11 | 297 | 2 | 279 | 3.31e-22 | 96.3 |
| MS.gene60520.t1 | AT4G09920 | 32.039 | 309 | 157 | 10 | 11 | 297 | 2 | 279 | 3.31e-22 | 96.3 |
| MS.gene60520.t1 | AT5G56370 | 30.056 | 356 | 205 | 13 | 11 | 357 | 2 | 322 | 4.35e-22 | 97.4 |
| MS.gene60520.t1 | AT5G56370 | 30.056 | 356 | 205 | 13 | 11 | 357 | 2 | 322 | 4.35e-22 | 97.4 |
| MS.gene60520.t1 | AT4G00315 | 29.620 | 368 | 200 | 17 | 11 | 348 | 2 | 340 | 7.53e-22 | 97.1 |
| MS.gene60520.t1 | AT5G41840 | 26.753 | 385 | 225 | 10 | 11 | 351 | 14 | 385 | 8.92e-22 | 97.4 |
| MS.gene60520.t1 | AT4G10400 | 29.888 | 358 | 190 | 13 | 11 | 350 | 2 | 316 | 1.85e-21 | 95.5 |
| MS.gene60520.t1 | AT4G10400 | 29.888 | 358 | 190 | 13 | 11 | 350 | 2 | 316 | 1.85e-21 | 95.5 |
| MS.gene60520.t1 | AT4G10400 | 29.888 | 358 | 190 | 13 | 11 | 350 | 2 | 316 | 1.85e-21 | 95.5 |
| MS.gene60520.t1 | AT4G26340 | 28.324 | 346 | 217 | 12 | 11 | 350 | 2 | 322 | 2.14e-21 | 95.5 |
| MS.gene60520.t1 | AT5G56380 | 28.325 | 406 | 235 | 16 | 11 | 385 | 2 | 382 | 2.69e-21 | 95.5 |
| MS.gene60520.t1 | AT5G56380 | 28.325 | 406 | 235 | 16 | 11 | 385 | 2 | 382 | 2.69e-21 | 95.5 |
| MS.gene60520.t1 | AT4G00320 | 26.772 | 381 | 227 | 11 | 7 | 351 | 9 | 373 | 1.97e-20 | 93.2 |
| MS.gene60520.t1 | AT2G04230 | 28.647 | 377 | 219 | 13 | 10 | 366 | 12 | 358 | 2.00e-20 | 92.8 |
| MS.gene60520.t1 | AT2G42720 | 28.649 | 370 | 223 | 13 | 11 | 357 | 2 | 353 | 2.30e-20 | 92.8 |
| MS.gene60520.t1 | AT3G59200 | 28.010 | 382 | 212 | 15 | 10 | 351 | 6 | 364 | 3.49e-20 | 91.3 |
| MS.gene60520.t1 | AT3G59160 | 25.377 | 398 | 224 | 15 | 10 | 351 | 12 | 392 | 4.96e-20 | 92.0 |
| MS.gene60520.t1 | AT3G59200 | 27.937 | 383 | 213 | 15 | 10 | 352 | 6 | 365 | 7.03e-20 | 91.7 |
| MS.gene60520.t1 | AT1G55660 | 27.838 | 370 | 204 | 18 | 11 | 348 | 53 | 391 | 7.30e-20 | 91.7 |
| MS.gene60520.t1 | AT1G55660 | 29.355 | 310 | 173 | 14 | 11 | 294 | 53 | 342 | 9.61e-20 | 90.1 |
| MS.gene60520.t1 | AT5G60610 | 27.513 | 378 | 220 | 15 | 11 | 368 | 2 | 345 | 2.39e-19 | 89.4 |
| MS.gene60520.t1 | AT5G60610 | 27.513 | 378 | 220 | 15 | 11 | 368 | 2 | 345 | 2.39e-19 | 89.4 |
| MS.gene60520.t1 | AT5G41830 | 26.842 | 380 | 228 | 12 | 7 | 351 | 9 | 373 | 8.32e-19 | 88.6 |
| MS.gene60520.t1 | AT5G56400 | 27.222 | 360 | 226 | 10 | 1 | 350 | 23 | 356 | 1.12e-18 | 87.8 |
| MS.gene60520.t1 | AT1G78760 | 27.473 | 364 | 220 | 14 | 9 | 351 | 14 | 354 | 1.37e-18 | 87.4 |
| MS.gene60520.t1 | AT2G29930 | 29.752 | 363 | 209 | 14 | 10 | 351 | 11 | 348 | 2.33e-18 | 87.0 |
| MS.gene60520.t1 | AT2G29930 | 29.752 | 363 | 209 | 14 | 10 | 351 | 11 | 348 | 2.33e-18 | 87.0 |
| MS.gene60520.t1 | AT3G58960 | 25.762 | 361 | 236 | 10 | 11 | 350 | 2 | 351 | 2.65e-18 | 86.7 |
| MS.gene60520.t1 | AT5G53840 | 29.558 | 362 | 215 | 13 | 4 | 351 | 11 | 346 | 3.10e-18 | 86.3 |
| MS.gene60520.t1 | AT1G51370 | 27.957 | 372 | 208 | 13 | 3 | 354 | 11 | 342 | 4.38e-18 | 85.9 |
| MS.gene60520.t1 | AT1G51370 | 27.957 | 372 | 208 | 13 | 3 | 354 | 11 | 342 | 5.52e-18 | 85.5 |
| MS.gene60520.t1 | AT1G58310 | 27.062 | 388 | 224 | 13 | 8 | 351 | 5 | 377 | 6.58e-18 | 85.9 |
| MS.gene60520.t1 | AT3G58860 | 27.701 | 361 | 218 | 11 | 8 | 348 | 4 | 341 | 6.87e-18 | 85.5 |
| MS.gene60520.t1 | AT3G44060 | 28.297 | 364 | 215 | 16 | 16 | 357 | 4 | 343 | 8.36e-18 | 85.1 |
| MS.gene60520.t1 | AT3G58900 | 27.513 | 378 | 217 | 12 | 11 | 351 | 2 | 359 | 1.01e-17 | 85.1 |
| MS.gene60520.t1 | AT5G44950 | 28.533 | 375 | 206 | 19 | 10 | 351 | 3 | 348 | 1.33e-17 | 84.3 |
| MS.gene60520.t1 | AT4G22280 | 30.484 | 351 | 215 | 12 | 10 | 351 | 1 | 331 | 1.37e-17 | 83.6 |
| MS.gene60520.t1 | AT1G51370 | 28.344 | 314 | 172 | 10 | 3 | 298 | 11 | 289 | 1.85e-17 | 83.2 |
| MS.gene60520.t1 | AT4G22280 | 30.571 | 350 | 214 | 12 | 11 | 351 | 2 | 331 | 1.87e-17 | 84.0 |
| MS.gene60520.t1 | AT5G56420 | 26.757 | 370 | 206 | 11 | 10 | 355 | 5 | 333 | 3.69e-17 | 83.2 |
| MS.gene60520.t1 | AT5G56420 | 26.757 | 370 | 206 | 11 | 10 | 355 | 5 | 333 | 3.69e-17 | 83.2 |
| MS.gene60520.t1 | AT5G56420 | 26.757 | 370 | 206 | 11 | 10 | 355 | 5 | 333 | 3.69e-17 | 83.2 |
| MS.gene60520.t1 | AT4G26350 | 26.923 | 364 | 209 | 15 | 11 | 350 | 2 | 332 | 5.57e-17 | 82.4 |
| MS.gene60520.t1 | AT1G66310 | 28.767 | 365 | 220 | 12 | 5 | 350 | 13 | 356 | 1.30e-16 | 81.6 |
| MS.gene60520.t1 | AT3G49150 | 26.537 | 309 | 200 | 9 | 9 | 299 | 14 | 313 | 1.68e-16 | 81.3 |
| MS.gene60520.t1 | AT4G13960 | 27.394 | 376 | 212 | 14 | 11 | 351 | 2 | 351 | 1.96e-16 | 81.3 |
| MS.gene60520.t1 | AT4G13960 | 27.394 | 376 | 212 | 14 | 11 | 351 | 2 | 351 | 1.96e-16 | 81.3 |
| MS.gene60520.t1 | AT4G00160 | 27.507 | 349 | 221 | 8 | 10 | 350 | 15 | 339 | 2.16e-16 | 80.9 |
| MS.gene60520.t1 | AT3G03030 | 25.000 | 376 | 233 | 10 | 11 | 351 | 2 | 363 | 2.54e-16 | 80.9 |
| MS.gene60520.t1 | AT1G13780 | 28.117 | 377 | 213 | 16 | 11 | 351 | 10 | 364 | 4.30e-16 | 80.1 |
| MS.gene60520.t1 | AT5G56440 | 28.090 | 356 | 213 | 13 | 11 | 354 | 2 | 326 | 5.28e-16 | 79.7 |
| MS.gene60520.t1 | AT2G42730 | 27.989 | 368 | 215 | 15 | 10 | 348 | 4 | 350 | 5.43e-16 | 79.7 |
| MS.gene60520.t1 | AT3G58920 | 26.455 | 378 | 228 | 12 | 11 | 351 | 2 | 366 | 5.81e-16 | 79.7 |
| MS.gene60520.t1 | AT5G18770 | 26.997 | 363 | 232 | 11 | 4 | 348 | 17 | 364 | 6.72e-16 | 79.0 |
| MS.gene60520.t1 | AT5G18770 | 26.997 | 363 | 232 | 11 | 4 | 348 | 17 | 364 | 8.09e-16 | 79.3 |
| MS.gene60520.t1 | AT3G62430 | 27.809 | 356 | 227 | 12 | 11 | 351 | 2 | 342 | 8.91e-16 | 79.0 |
| MS.gene60520.t1 | AT3G49030 | 26.554 | 354 | 219 | 13 | 9 | 350 | 19 | 343 | 9.36e-16 | 79.0 |
| MS.gene60520.t1 | AT3G59240 | 26.374 | 364 | 229 | 12 | 10 | 351 | 7 | 353 | 1.35e-15 | 78.6 |
| MS.gene60520.t1 | AT5G56410 | 26.685 | 371 | 212 | 15 | 11 | 348 | 2 | 345 | 1.47e-15 | 78.6 |
| MS.gene60520.t1 | AT5G18780 | 26.966 | 356 | 229 | 13 | 10 | 351 | 10 | 348 | 1.52e-15 | 78.2 |
| MS.gene60520.t1 | AT5G18780 | 26.966 | 356 | 229 | 13 | 10 | 351 | 10 | 348 | 1.52e-15 | 78.2 |
| MS.gene60520.t1 | AT3G58880 | 26.064 | 376 | 225 | 10 | 11 | 355 | 3 | 356 | 1.96e-15 | 78.2 |
| MS.gene60520.t1 | AT3G03040 | 26.260 | 377 | 222 | 11 | 11 | 351 | 2 | 358 | 2.48e-15 | 77.8 |
| MS.gene60520.t1 | AT5G53635 | 29.050 | 358 | 214 | 15 | 13 | 350 | 2 | 339 | 3.16e-15 | 77.4 |
| MS.gene60520.t1 | AT1G06630 | 28.297 | 364 | 223 | 14 | 10 | 354 | 11 | 355 | 3.55e-15 | 76.6 |
| MS.gene60520.t1 | AT1G06630 | 28.297 | 364 | 223 | 14 | 10 | 354 | 11 | 355 | 3.55e-15 | 76.6 |
| MS.gene60520.t1 | AT5G18780 | 26.554 | 354 | 231 | 11 | 10 | 350 | 10 | 347 | 3.84e-15 | 76.6 |
| MS.gene60520.t1 | AT5G18780 | 26.554 | 354 | 231 | 11 | 10 | 350 | 10 | 347 | 3.84e-15 | 76.6 |
| MS.gene60520.t1 | AT3G50710 | 27.778 | 360 | 214 | 14 | 11 | 354 | 2 | 331 | 4.74e-15 | 76.6 |
| MS.gene60520.t1 | AT3G52680 | 27.989 | 368 | 205 | 10 | 10 | 356 | 20 | 348 | 6.72e-15 | 75.9 |
| MS.gene60520.t1 | AT5G44490 | 28.426 | 394 | 221 | 16 | 6 | 367 | 12 | 376 | 7.08e-15 | 76.3 |
| MS.gene60520.t1 | AT5G62970 | 26.893 | 383 | 209 | 18 | 11 | 352 | 2 | 354 | 7.36e-15 | 76.3 |
| MS.gene60520.t1 | AT5G44490 | 28.426 | 394 | 221 | 16 | 6 | 367 | 12 | 376 | 8.73e-15 | 76.3 |
| MS.gene60520.t1 | AT4G15060 | 29.167 | 312 | 176 | 16 | 6 | 294 | 167 | 456 | 8.87e-15 | 76.3 |
| MS.gene60520.t1 | AT1G06630 | 27.394 | 376 | 235 | 14 | 10 | 366 | 20 | 376 | 9.09e-15 | 75.9 |
| MS.gene60520.t1 | AT1G06630 | 27.394 | 376 | 235 | 14 | 10 | 366 | 11 | 367 | 9.48e-15 | 75.5 |
| MS.gene60520.t1 | AT1G06630 | 27.394 | 376 | 235 | 14 | 10 | 366 | 11 | 367 | 9.48e-15 | 75.5 |
| MS.gene60520.t1 | AT1G06630 | 27.394 | 376 | 235 | 14 | 10 | 366 | 11 | 367 | 9.48e-15 | 75.5 |
| MS.gene60520.t1 | AT1G06630 | 27.394 | 376 | 235 | 14 | 10 | 366 | 11 | 367 | 9.48e-15 | 75.5 |
| MS.gene60520.t1 | AT4G15060 | 28.387 | 310 | 177 | 15 | 8 | 294 | 23 | 310 | 1.07e-14 | 75.5 |
| MS.gene60520.t1 | AT2G26860 | 27.920 | 351 | 220 | 12 | 11 | 350 | 2 | 330 | 1.08e-14 | 75.5 |
| MS.gene60520.t1 | AT2G26860 | 27.920 | 351 | 220 | 12 | 11 | 350 | 2 | 330 | 1.08e-14 | 75.5 |
| MS.gene60520.t1 | AT3G59250 | 27.195 | 353 | 206 | 10 | 10 | 351 | 6 | 318 | 1.10e-14 | 75.5 |
| MS.gene60520.t1 | AT5G25860 | 26.757 | 370 | 229 | 14 | 10 | 351 | 11 | 366 | 1.15e-14 | 75.5 |
| MS.gene60520.t1 | AT5G38392 | 33.981 | 206 | 111 | 6 | 11 | 200 | 2 | 198 | 1.32e-14 | 72.8 |
| MS.gene60520.t1 | AT3G52680 | 28.375 | 363 | 198 | 11 | 10 | 350 | 20 | 342 | 1.69e-14 | 75.1 |
| MS.gene60520.t1 | AT1G06630 | 28.255 | 361 | 221 | 14 | 10 | 351 | 11 | 352 | 1.69e-14 | 75.1 |
| MS.gene60520.t1 | AT3G58900 | 27.356 | 329 | 186 | 11 | 11 | 302 | 2 | 314 | 1.99e-14 | 73.9 |
| MS.gene60520.t1 | AT3G58900 | 27.628 | 333 | 186 | 12 | 11 | 304 | 2 | 318 | 2.50e-14 | 73.9 |
| MS.gene60520.t1 | AT3G58900 | 27.628 | 333 | 186 | 12 | 11 | 304 | 2 | 318 | 2.50e-14 | 73.9 |
| MS.gene60520.t1 | AT5G22700 | 28.022 | 364 | 217 | 13 | 11 | 350 | 6 | 348 | 3.01e-14 | 74.3 |
| MS.gene60520.t1 | AT5G22700 | 28.022 | 364 | 217 | 13 | 11 | 350 | 6 | 348 | 3.01e-14 | 74.3 |
| MS.gene60520.t1 | AT5G22700 | 28.022 | 364 | 217 | 13 | 11 | 350 | 6 | 348 | 3.01e-14 | 74.3 |
| MS.gene60520.t1 | AT5G22700 | 28.022 | 364 | 217 | 13 | 11 | 350 | 6 | 348 | 3.01e-14 | 74.3 |
| MS.gene60520.t1 | AT5G22700 | 28.022 | 364 | 217 | 13 | 11 | 350 | 43 | 385 | 4.70e-14 | 73.9 |
| MS.gene60520.t1 | AT1G66300 | 26.344 | 372 | 224 | 13 | 5 | 350 | 23 | 370 | 6.11e-14 | 73.6 |
| MS.gene60520.t1 | AT5G38590 | 26.816 | 358 | 204 | 13 | 11 | 350 | 2 | 319 | 1.18e-13 | 72.4 |
| MS.gene60520.t1 | AT3G03030 | 36.364 | 143 | 80 | 3 | 11 | 143 | 2 | 143 | 1.20e-13 | 71.6 |
| MS.gene60520.t1 | AT1G13780 | 28.615 | 325 | 177 | 14 | 11 | 299 | 10 | 315 | 1.31e-13 | 71.6 |
| MS.gene60520.t1 | AT5G56690 | 27.324 | 355 | 226 | 10 | 13 | 356 | 4 | 337 | 1.64e-13 | 72.0 |
| MS.gene60520.t1 | AT3G49030 | 28.745 | 247 | 153 | 9 | 9 | 246 | 19 | 251 | 1.96e-13 | 71.6 |
| MS.gene60520.t1 | AT3G26930 | 28.412 | 359 | 218 | 13 | 2 | 350 | 12 | 341 | 2.49e-13 | 71.6 |
| MS.gene60520.t1 | AT5G22670 | 26.543 | 324 | 200 | 10 | 1 | 303 | 1 | 307 | 3.28e-13 | 71.2 |
| MS.gene60520.t1 | AT3G58930 | 24.806 | 387 | 226 | 12 | 11 | 351 | 2 | 369 | 3.61e-13 | 71.2 |
| MS.gene60520.t1 | AT3G58930 | 24.806 | 387 | 226 | 12 | 11 | 351 | 2 | 369 | 3.61e-13 | 71.2 |
| MS.gene60520.t1 | AT3G58930 | 24.806 | 387 | 226 | 12 | 11 | 351 | 2 | 369 | 3.61e-13 | 71.2 |
| MS.gene60520.t1 | AT5G38590 | 28.846 | 312 | 177 | 13 | 10 | 305 | 1 | 283 | 4.65e-13 | 69.7 |
| MS.gene60520.t1 | AT2G26030 | 25.410 | 366 | 230 | 13 | 11 | 351 | 4 | 351 | 8.68e-13 | 69.7 |
| MS.gene60520.t1 | AT2G26030 | 25.410 | 366 | 230 | 13 | 11 | 351 | 4 | 351 | 8.68e-13 | 69.7 |
| MS.gene60520.t1 | AT4G13965 | 27.049 | 366 | 193 | 15 | 11 | 350 | 10 | 327 | 9.74e-13 | 69.7 |
| MS.gene60520.t1 | AT5G50270 | 26.000 | 350 | 234 | 11 | 11 | 352 | 2 | 334 | 1.15e-12 | 69.3 |
| MS.gene60520.t1 | AT5G22700 | 33.511 | 188 | 110 | 5 | 11 | 195 | 43 | 218 | 1.32e-12 | 69.3 |
| MS.gene60520.t1 | AT2G26030 | 25.479 | 365 | 229 | 13 | 11 | 350 | 4 | 350 | 1.33e-12 | 69.3 |
| MS.gene60520.t1 | AT5G56810 | 29.150 | 247 | 152 | 8 | 11 | 247 | 15 | 248 | 1.43e-12 | 68.2 |
| MS.gene60520.t1 | AT3G59150 | 28.261 | 322 | 185 | 13 | 11 | 302 | 13 | 318 | 1.45e-12 | 69.3 |
| MS.gene60520.t1 | AT5G56810 | 29.150 | 247 | 152 | 8 | 11 | 247 | 15 | 248 | 1.86e-12 | 68.9 |
| MS.gene60520.t1 | AT5G22730 | 26.230 | 366 | 228 | 11 | 10 | 350 | 27 | 375 | 1.96e-12 | 68.6 |
| MS.gene60520.t1 | AT5G22730 | 26.230 | 366 | 228 | 11 | 10 | 350 | 27 | 375 | 2.09e-12 | 68.9 |
| MS.gene60520.t1 | AT5G22730 | 26.230 | 366 | 228 | 11 | 10 | 350 | 27 | 375 | 2.09e-12 | 68.9 |
| MS.gene60520.t1 | AT3G42770 | 28.060 | 335 | 176 | 13 | 16 | 311 | 4 | 312 | 2.09e-12 | 68.9 |
| MS.gene60520.t1 | AT3G44810 | 24.931 | 361 | 233 | 11 | 13 | 351 | 9 | 353 | 2.17e-12 | 68.6 |
| MS.gene60520.t1 | AT1G66290 | 28.495 | 372 | 212 | 17 | 6 | 351 | 24 | 367 | 2.38e-12 | 68.6 |
| MS.gene60520.t1 | AT4G10410 | 26.807 | 332 | 156 | 11 | 25 | 349 | 1 | 252 | 2.71e-12 | 67.0 |
| MS.gene60520.t1 | AT3G26922 | 27.801 | 241 | 157 | 7 | 10 | 245 | 13 | 241 | 3.15e-12 | 67.4 |
| MS.gene60520.t1 | AT3G26922 | 27.801 | 241 | 157 | 7 | 10 | 245 | 13 | 241 | 3.15e-12 | 67.4 |
| MS.gene60520.t1 | AT5G27750 | 25.066 | 379 | 230 | 11 | 11 | 352 | 5 | 366 | 3.48e-12 | 67.8 |
| MS.gene60520.t1 | AT1G69630 | 25.600 | 375 | 233 | 13 | 4 | 353 | 11 | 364 | 4.25e-12 | 67.8 |
| MS.gene60520.t1 | AT1G16930 | 24.668 | 377 | 230 | 12 | 2 | 351 | 6 | 355 | 4.27e-12 | 67.8 |
| MS.gene60520.t1 | AT1G16930 | 24.668 | 377 | 230 | 12 | 2 | 351 | 6 | 355 | 4.27e-12 | 67.8 |
| MS.gene60520.t1 | AT1G16930 | 24.668 | 377 | 230 | 12 | 2 | 351 | 6 | 355 | 4.27e-12 | 67.8 |
| MS.gene60520.t1 | AT5G27750 | 25.000 | 380 | 231 | 11 | 11 | 353 | 5 | 367 | 4.41e-12 | 67.8 |
| MS.gene60520.t1 | AT3G58940 | 25.410 | 366 | 219 | 12 | 11 | 351 | 2 | 338 | 5.82e-12 | 67.8 |
| MS.gene60520.t1 | AT3G58940 | 25.410 | 366 | 219 | 12 | 11 | 351 | 2 | 338 | 5.82e-12 | 67.8 |
| MS.gene60520.t1 | AT3G49040 | 26.733 | 303 | 180 | 12 | 8 | 294 | 14 | 290 | 6.54e-12 | 66.2 |
| MS.gene60520.t1 | AT3G59000 | 25.385 | 390 | 211 | 9 | 11 | 351 | 2 | 360 | 8.42e-12 | 67.0 |
| MS.gene60520.t1 | AT3G51530 | 27.143 | 350 | 217 | 11 | 10 | 350 | 29 | 349 | 9.04e-12 | 66.6 |
| MS.gene60520.t1 | AT3G60040 | 26.098 | 387 | 237 | 13 | 10 | 366 | 231 | 598 | 9.58e-12 | 67.0 |
| MS.gene60520.t1 | AT3G60040 | 26.098 | 387 | 237 | 13 | 10 | 366 | 229 | 596 | 1.26e-11 | 66.6 |
| MS.gene60520.t1 | AT3G60040 | 26.031 | 388 | 236 | 14 | 10 | 366 | 12 | 379 | 1.38e-11 | 66.6 |
| MS.gene60520.t1 | AT3G60040 | 26.098 | 387 | 237 | 13 | 10 | 366 | 232 | 599 | 1.51e-11 | 66.6 |
| MS.gene60520.t1 | AT3G60040 | 26.098 | 387 | 237 | 13 | 10 | 366 | 231 | 598 | 1.57e-11 | 66.6 |
| MS.gene60520.t1 | AT3G58980 | 26.042 | 384 | 235 | 14 | 11 | 364 | 2 | 366 | 2.80e-11 | 65.5 |
| MS.gene60520.t1 | AT2G29910 | 25.886 | 367 | 216 | 15 | 10 | 339 | 4 | 351 | 3.48e-11 | 64.3 |
| MS.gene60520.t1 | AT2G29910 | 25.886 | 367 | 216 | 15 | 10 | 339 | 4 | 351 | 3.48e-11 | 64.3 |
| MS.gene60520.t1 | AT2G29910 | 25.886 | 367 | 216 | 15 | 10 | 339 | 4 | 351 | 3.48e-11 | 64.3 |
| MS.gene60520.t1 | AT2G29910 | 25.886 | 367 | 216 | 15 | 10 | 339 | 4 | 351 | 3.48e-11 | 64.3 |
| MS.gene60520.t1 | AT2G29910 | 25.886 | 367 | 216 | 15 | 10 | 339 | 28 | 375 | 3.90e-11 | 64.3 |
| MS.gene60520.t1 | AT5G22660 | 26.039 | 361 | 232 | 13 | 10 | 351 | 12 | 356 | 8.93e-11 | 63.5 |
| MS.gene60520.t1 | AT1G66320 | 25.278 | 360 | 225 | 13 | 15 | 351 | 34 | 372 | 8.99e-11 | 63.5 |
Find 78 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTACTGGTTTGTTTGAATT+TGG | 0.121921 | 1.2:-68407136 | None:intergenic |
| ACAAATCCTCCATTCTAGTA+TGG | 0.245317 | 1.2:+68407182 | MS.gene60520:CDS |
| TAATCGGTCCTGCTCTTTAT+CGG | 0.276903 | 1.2:-68405472 | None:intergenic |
| TCACAATTTATCATCTTTAT+CGG | 0.278854 | 1.2:+68406481 | MS.gene60520:CDS |
| CAAGTGACGGGGCATTAATT+TGG | 0.287533 | 1.2:-68406154 | None:intergenic |
| ATGGCAAGATGCTTAAGTTT+TGG | 0.290006 | 1.2:-68406560 | None:intergenic |
| TATTGTGTTTAATTCTATCT+TGG | 0.324989 | 1.2:+68405959 | MS.gene60520:CDS |
| AAAGTCAAGGTTGGGGATCT+TGG | 0.348543 | 1.2:-68405598 | None:intergenic |
| GCTTGTGGTCTTAAAATTGC+GGG | 0.361424 | 1.2:+68405863 | MS.gene60520:CDS |
| GGAAAGCCTAAGGGGCAATA+AGG | 0.368330 | 1.2:-68405829 | None:intergenic |
| GGTAATTCAAAGTCAAGGTT+GGG | 0.380669 | 1.2:-68405606 | None:intergenic |
| ATATACAGATTGGATTGCTT+TGG | 0.388000 | 1.2:-68405652 | None:intergenic |
| TTTACATGACTGCATGAAAC+AGG | 0.390447 | 1.2:+68406046 | MS.gene60520:CDS |
| CGTCTGAAAGATCGCTTAAT+CGG | 0.392098 | 1.2:-68405488 | None:intergenic |
| AAATATCTGAAAATTGTTGT+TGG | 0.393636 | 1.2:+68406507 | MS.gene60520:CDS |
| TCGAGTAAGCTTCTTTCTAC+TGG | 0.410299 | 1.2:-68407151 | None:intergenic |
| GTCCTGCTCTTTATCGGATT+CGG | 0.411601 | 1.2:-68405466 | None:intergenic |
| ATTTCTTTATTTCCGCGTCT+TGG | 0.418727 | 1.2:+68406110 | MS.gene60520:CDS |
| AAGAACTTGAATTCGATTGT+TGG | 0.421294 | 1.2:+68405790 | MS.gene60520:CDS |
| GACCACAAGCGACTTAGAAA+TGG | 0.423352 | 1.2:-68405850 | None:intergenic |
| ACCATATGATATGCACTTGT+GGG | 0.445487 | 1.2:+68405740 | MS.gene60520:CDS |
| TAGAATTAAACACAATAAGT+TGG | 0.445919 | 1.2:-68405953 | None:intergenic |
| AAGAGTAGCTCGATCAAGAT+TGG | 0.446848 | 1.2:-68406237 | None:intergenic |
| TCTTTATTTCCGCGTCTTGG+TGG | 0.450745 | 1.2:+68406113 | MS.gene60520:CDS |
| TTTATGCAGTTTCTAAGCAT+GGG | 0.464461 | 1.2:+68406425 | MS.gene60520:intron |
| ATTTGTTAGTATGATGTTGC+GGG | 0.465512 | 1.2:+68407289 | MS.gene60520:intron |
| ACTTAAGCATCTTGCCATTG+AGG | 0.470976 | 1.2:+68406565 | MS.gene60520:CDS |
| TGAATTCGATTGTTGGTCCA+TGG | 0.474053 | 1.2:+68405797 | MS.gene60520:CDS |
| TCTTCGCATTAGTAATCATC+CGG | 0.478281 | 1.2:+68406256 | MS.gene60520:CDS |
| CTTTGAATTACCAATGACTA+CGG | 0.481951 | 1.2:+68405617 | MS.gene60520:CDS |
| ACCCACAAGTGCATATCATA+TGG | 0.486209 | 1.2:-68405741 | None:intergenic |
| GTATACAAACTGTTCAAATC+CGG | 0.486513 | 1.2:-68406275 | None:intergenic |
| CGCTTGTGGTCTTAAAATTG+CGG | 0.490842 | 1.2:+68405862 | MS.gene60520:CDS |
| GGAGAGCTGCATATACAGAT+TGG | 0.504410 | 1.2:-68405662 | None:intergenic |
| TCAGAAGAATAATTAAGTCT+TGG | 0.507877 | 1.2:-68405897 | None:intergenic |
| AGCCTAAGGGGCAATAAGGT+TGG | 0.508182 | 1.2:-68405825 | None:intergenic |
| TGGTAATTCAAAGTCAAGGT+TGG | 0.508833 | 1.2:-68405607 | None:intergenic |
| ACTTAGAAATGGAAAGCCTA+AGG | 0.512993 | 1.2:-68405839 | None:intergenic |
| TTTGCAGAACGTCAAGTGAC+GGG | 0.513099 | 1.2:-68406166 | None:intergenic |
| TTCCATTTCTAAGTCGCTTG+TGG | 0.515162 | 1.2:+68405848 | MS.gene60520:CDS |
| GACATAGGATCCGTAGTCAT+TGG | 0.517402 | 1.2:-68405627 | None:intergenic |
| CAAATCCTCCATTCTAGTAT+GGG | 0.523811 | 1.2:+68407183 | MS.gene60520:CDS |
| TATTTGTTAGTATGATGTTG+CGG | 0.524142 | 1.2:+68407288 | MS.gene60520:intron |
| ATCTCGTTGTCCACATCTTG+AGG | 0.524833 | 1.2:+68406016 | MS.gene60520:CDS |
| AATTTGGAGTGGACAAACAT+TGG | 0.530609 | 1.2:-68406138 | None:intergenic |
| AATATTCATACACACCTCAA+TGG | 0.534611 | 1.2:-68406579 | None:intergenic |
| CCAGTGTTCTATCTACAAGA+TGG | 0.537999 | 1.2:+68405562 | MS.gene60520:CDS |
| CAATAAGGTTGGTTTCTCCA+TGG | 0.541074 | 1.2:-68405814 | None:intergenic |
| AACCAACCTTATTGCCCCTT+AGG | 0.541824 | 1.2:+68405823 | MS.gene60520:CDS |
| TGGATTGCTTTGGACGACAT+AGG | 0.543112 | 1.2:-68405642 | None:intergenic |
| ACTTCATACCCATACTAGAA+TGG | 0.545060 | 1.2:-68407191 | None:intergenic |
| CAGTGTTCTATCTACAAGAT+GGG | 0.555298 | 1.2:+68405563 | MS.gene60520:CDS |
| CTCCGAATCCGATAAAGAGC+AGG | 0.555535 | 1.2:+68405464 | MS.gene60520:CDS |
| ATTCAAGTTCTTGAACCTTG+AGG | 0.556422 | 1.2:-68405779 | None:intergenic |
| CTTAGAAATGGAAAGCCTAA+GGG | 0.556919 | 1.2:-68405838 | None:intergenic |
| CACCATATGATATGCACTTG+TGG | 0.561872 | 1.2:+68405739 | MS.gene60520:CDS |
| TTATGCAGTTTCTAAGCATG+GGG | 0.573192 | 1.2:+68406426 | MS.gene60520:intron |
| TTCAAAAGCACTAGACCTCA+AGG | 0.574224 | 1.2:+68405764 | MS.gene60520:CDS |
| GTAATTCAAAGTCAAGGTTG+GGG | 0.578498 | 1.2:-68405605 | None:intergenic |
| GACGGGGCATTAATTTGGAG+TGG | 0.584321 | 1.2:-68406149 | None:intergenic |
| ATTTGCAGAACGTCAAGTGA+CGG | 0.592314 | 1.2:-68406167 | None:intergenic |
| AGATGAAGAATCTTTAGTGA+CGG | 0.601943 | 1.2:-68405930 | None:intergenic |
| CTAAGTCTCTATAGTGACGA+TGG | 0.611578 | 1.2:+68405711 | MS.gene60520:CDS |
| TGTGAAAAGTGAGAAGATGT+AGG | 0.614072 | 1.2:-68406463 | None:intergenic |
| GAATAATTAAGTCTTGGATG+AGG | 0.615546 | 1.2:-68405891 | None:intergenic |
| GTAGAAAGAAGCTTACTCGA+GGG | 0.619367 | 1.2:+68407154 | MS.gene60520:CDS |
| TCATTGGTAATTCAAAGTCA+AGG | 0.634424 | 1.2:-68405611 | None:intergenic |
| CTTGTGGTCTTAAAATTGCG+GGG | 0.639914 | 1.2:+68405864 | MS.gene60520:CDS |
| GTTAGTATGATGTTGCGGGA+TGG | 0.653129 | 1.2:+68407293 | MS.gene60520:intron |
| TTAGAAATGGAAAGCCTAAG+GGG | 0.656773 | 1.2:-68405837 | None:intergenic |
| TTGCAGAACGTCAAGTGACG+GGG | 0.657565 | 1.2:-68406165 | None:intergenic |
| TAGAAAGAAGCTTACTCGAG+GGG | 0.661193 | 1.2:+68407155 | MS.gene60520:CDS |
| AGTAGAAAGAAGCTTACTCG+AGG | 0.666155 | 1.2:+68407153 | MS.gene60520:CDS |
| TCATACCCATACTAGAATGG+AGG | 0.667044 | 1.2:-68407188 | None:intergenic |
| CCATCTTGTAGATAGAACAC+TGG | 0.676162 | 1.2:-68405562 | None:intergenic |
| GTGGTCTTAAAATTGCGGGG+CGG | 0.702393 | 1.2:+68405867 | MS.gene60520:CDS |
| ACATTGGAACCACCAAGACG+CGG | 0.705115 | 1.2:-68406122 | None:intergenic |
| TATGCAGTTTCTAAGCATGG+GGG | 0.711635 | 1.2:+68406427 | MS.gene60520:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTAATTATTTTTTTAT+CGG | - | chr1.2:68406727-68406746 | None:intergenic | 0.0% |
| !! | TAATGAAAAGTTATAACAAA+TGG | + | chr1.2:68406763-68406782 | MS.gene60520:intron | 15.0% |
| !! | TTGAGCAATTTATAATATAT+CGG | - | chr1.2:68407087-68407106 | None:intergenic | 15.0% |
| !!! | TGCACAATATTTTTTTAAAA+TGG | + | chr1.2:68406614-68406633 | MS.gene60520:intron | 15.0% |
| !! | AAATATCTGAAAATTGTTGT+TGG | + | chr1.2:68406507-68406526 | MS.gene60520:CDS | 20.0% |
| !! | ATGCATTTAATATTCATGTT+AGG | + | chr1.2:68406817-68406836 | MS.gene60520:intron | 20.0% |
| !! | GTTCTAATAACCATAATATT+TGG | + | chr1.2:68406903-68406922 | MS.gene60520:intron | 20.0% |
| !! | TAGAATTAAACACAATAAGT+TGG | - | chr1.2:68405956-68405975 | None:intergenic | 20.0% |
| !! | TATTGTGTTTAATTCTATCT+TGG | + | chr1.2:68405959-68405978 | MS.gene60520:CDS | 20.0% |
| !! | TCACAATTTATCATCTTTAT+CGG | + | chr1.2:68406481-68406500 | MS.gene60520:CDS | 20.0% |
| !! | TGAGCAATTTATAATATATC+GGG | - | chr1.2:68407086-68407105 | None:intergenic | 20.0% |
| !! | TTAAACGATACCAAATATTA+TGG | - | chr1.2:68406916-68406935 | None:intergenic | 20.0% |
| !!! | ACTTAGTTTTCTTAAGTTTT+CGG | - | chr1.2:68405697-68405716 | None:intergenic | 20.0% |
| !!! | TTTATGAACTCATATTTTCT+GGG | - | chr1.2:68406212-68406231 | None:intergenic | 20.0% |
| ! | AAAAAAAATTCCTCAAGATG+TGG | - | chr1.2:68406029-68406048 | None:intergenic | 25.0% |
| ! | CTCATTACATTTGAATTTAG+AGG | + | chr1.2:68407028-68407047 | MS.gene60520:intron | 25.0% |
| ! | TCAGAAGAATAATTAAGTCT+TGG | - | chr1.2:68405900-68405919 | None:intergenic | 25.0% |
| !! | GTTTATGAACTCATATTTTC+TGG | - | chr1.2:68406213-68406232 | None:intergenic | 25.0% |
| !! | TATTTGTTAGTATGATGTTG+CGG | + | chr1.2:68407288-68407307 | MS.gene60520:intron | 25.0% |
| !! | TTTTTATGAACGAGAAATGT+TGG | + | chr1.2:68407253-68407272 | MS.gene60520:intron | 25.0% |
| !!! | AGATTTTTTGAAAGACATGT+TGG | - | chr1.2:68407010-68407029 | None:intergenic | 25.0% |
| AAGAACTTGAATTCGATTGT+TGG | + | chr1.2:68405790-68405809 | MS.gene60520:CDS | 30.0% | |
| AATATTCATACACACCTCAA+TGG | - | chr1.2:68406582-68406601 | None:intergenic | 30.0% | |
| AGATGAAGAATCTTTAGTGA+CGG | - | chr1.2:68405933-68405952 | None:intergenic | 30.0% | |
| ATATACAGATTGGATTGCTT+TGG | - | chr1.2:68405655-68405674 | None:intergenic | 30.0% | |
| CTTTGAATTACCAATGACTA+CGG | + | chr1.2:68405617-68405636 | MS.gene60520:CDS | 30.0% | |
| GAATAATTAAGTCTTGGATG+AGG | - | chr1.2:68405894-68405913 | None:intergenic | 30.0% | |
| GTATACAAACTGTTCAAATC+CGG | - | chr1.2:68406278-68406297 | None:intergenic | 30.0% | |
| TCGTGTAATATTGTCTACAT+GGG | - | chr1.2:68406853-68406872 | None:intergenic | 30.0% | |
| TTGCTCAAGTAATTTGAAGA+AGG | + | chr1.2:68407099-68407118 | MS.gene60520:intron | 30.0% | |
| TTTATGCAGTTTCTAAGCAT+GGG | + | chr1.2:68406425-68406444 | MS.gene60520:intron | 30.0% | |
| ! | ATTTGTTAGTATGATGTTGC+GGG | + | chr1.2:68407289-68407308 | MS.gene60520:intron | 30.0% |
| ! | TCATTGGTAATTCAAAGTCA+AGG | - | chr1.2:68405614-68405633 | None:intergenic | 30.0% |
| ! | TTTTATGCAGTTTCTAAGCA+TGG | + | chr1.2:68406424-68406443 | MS.gene60520:intron | 30.0% |
| !! | TCTACTGGTTTGTTTGAATT+TGG | - | chr1.2:68407139-68407158 | None:intergenic | 30.0% |
| !!! | GAAAATTTTTGAAACCGAAG+AGG | + | chr1.2:68406949-68406968 | MS.gene60520:intron | 30.0% |
| !!! | TGTAAGACTCTTTTGTTGTT+AGG | - | chr1.2:68405539-68405558 | None:intergenic | 30.0% |
| AAGATTGAGCGAAAGATACT+TGG | + | chr1.2:68406686-68406705 | MS.gene60520:intron | 35.0% | |
| ACAAATCCTCCATTCTAGTA+TGG | + | chr1.2:68407182-68407201 | MS.gene60520:CDS | 35.0% | |
| ACCATATGATATGCACTTGT+GGG | + | chr1.2:68405740-68405759 | MS.gene60520:CDS | 35.0% | |
| ACTTAGAAATGGAAAGCCTA+AGG | - | chr1.2:68405842-68405861 | None:intergenic | 35.0% | |
| ACTTCATACCCATACTAGAA+TGG | - | chr1.2:68407194-68407213 | None:intergenic | 35.0% | |
| CAAATCCTCCATTCTAGTAT+GGG | + | chr1.2:68407183-68407202 | MS.gene60520:CDS | 35.0% | |
| CAGTGTTCTATCTACAAGAT+GGG | + | chr1.2:68405563-68405582 | MS.gene60520:CDS | 35.0% | |
| CTTAGAAATGGAAAGCCTAA+GGG | - | chr1.2:68405841-68405860 | None:intergenic | 35.0% | |
| GGTAATTCAAAGTCAAGGTT+GGG | - | chr1.2:68405609-68405628 | None:intergenic | 35.0% | |
| GTAATTCAAAGTCAAGGTTG+GGG | - | chr1.2:68405608-68405627 | None:intergenic | 35.0% | |
| GTCGTGTAATATTGTCTACA+TGG | - | chr1.2:68406854-68406873 | None:intergenic | 35.0% | |
| TCAAAACGTACAAACTGAGT+TGG | + | chr1.2:68407054-68407073 | MS.gene60520:intron | 35.0% | |
| TCTTCGCATTAGTAATCATC+CGG | + | chr1.2:68406256-68406275 | MS.gene60520:CDS | 35.0% | |
| TGAAAGACATGTTGGAGTTT+CGG | - | chr1.2:68407002-68407021 | None:intergenic | 35.0% | |
| TGGTAATTCAAAGTCAAGGT+TGG | - | chr1.2:68405610-68405629 | None:intergenic | 35.0% | |
| TGTGAAAAGTGAGAAGATGT+AGG | - | chr1.2:68406466-68406485 | None:intergenic | 35.0% | |
| TTAGAAATGGAAAGCCTAAG+GGG | - | chr1.2:68405840-68405859 | None:intergenic | 35.0% | |
| TTATGCAGTTTCTAAGCATG+GGG | + | chr1.2:68406426-68406445 | MS.gene60520:intron | 35.0% | |
| TTTACATGACTGCATGAAAC+AGG | + | chr1.2:68406046-68406065 | MS.gene60520:CDS | 35.0% | |
| ! | AATTTGGAGTGGACAAACAT+TGG | - | chr1.2:68406141-68406160 | None:intergenic | 35.0% |
| ! | ATGGCAAGATGCTTAAGTTT+TGG | - | chr1.2:68406563-68406582 | None:intergenic | 35.0% |
| ! | ATTCAAGTTCTTGAACCTTG+AGG | - | chr1.2:68405782-68405801 | None:intergenic | 35.0% |
| ! | ATTTCTTTATTTCCGCGTCT+TGG | + | chr1.2:68406110-68406129 | MS.gene60520:CDS | 35.0% |
| AAGAGGTTGAAAACACAGGT+TGG | + | chr1.2:68406966-68406985 | MS.gene60520:intron | 40.0% | |
| AAGAGTAGCTCGATCAAGAT+TGG | - | chr1.2:68406240-68406259 | None:intergenic | 40.0% | |
| ACCCACAAGTGCATATCATA+TGG | - | chr1.2:68405744-68405763 | None:intergenic | 40.0% | |
| ACTTAAGCATCTTGCCATTG+AGG | + | chr1.2:68406565-68406584 | MS.gene60520:CDS | 40.0% | |
| AGAGGTTGAAAACACAGGTT+GGG | + | chr1.2:68406967-68406986 | MS.gene60520:intron | 40.0% | |
| AGTAGAAAGAAGCTTACTCG+AGG | + | chr1.2:68407153-68407172 | MS.gene60520:CDS | 40.0% | |
| ATTTGCAGAACGTCAAGTGA+CGG | - | chr1.2:68406170-68406189 | None:intergenic | 40.0% | |
| CACCATATGATATGCACTTG+TGG | + | chr1.2:68405739-68405758 | MS.gene60520:CDS | 40.0% | |
| CCAGTGTTCTATCTACAAGA+TGG | + | chr1.2:68405562-68405581 | MS.gene60520:CDS | 40.0% | |
| CCATCTTGTAGATAGAACAC+TGG | - | chr1.2:68405565-68405584 | None:intergenic | 40.0% | |
| CGTCTGAAAGATCGCTTAAT+CGG | - | chr1.2:68405491-68405510 | None:intergenic | 40.0% | |
| CTAAGTCTCTATAGTGACGA+TGG | + | chr1.2:68405711-68405730 | MS.gene60520:CDS | 40.0% | |
| GTAGAAAGAAGCTTACTCGA+GGG | + | chr1.2:68407154-68407173 | MS.gene60520:CDS | 40.0% | |
| TAATCGGTCCTGCTCTTTAT+CGG | - | chr1.2:68405475-68405494 | None:intergenic | 40.0% | |
| TAGAAAGAAGCTTACTCGAG+GGG | + | chr1.2:68407155-68407174 | MS.gene60520:CDS | 40.0% | |
| TATGCAGTTTCTAAGCATGG+GGG | + | chr1.2:68406427-68406446 | MS.gene60520:intron | 40.0% | |
| TCATACCCATACTAGAATGG+AGG | - | chr1.2:68407191-68407210 | None:intergenic | 40.0% | |
| TCGAGTAAGCTTCTTTCTAC+TGG | - | chr1.2:68407154-68407173 | None:intergenic | 40.0% | |
| TGAATTCGATTGTTGGTCCA+TGG | + | chr1.2:68405797-68405816 | MS.gene60520:CDS | 40.0% | |
| TTCCATTTCTAAGTCGCTTG+TGG | + | chr1.2:68405848-68405867 | MS.gene60520:CDS | 40.0% | |
| ! | ACCTGTGTTTTCAACCTCTT+CGG | - | chr1.2:68406966-68406985 | None:intergenic | 40.0% |
| ! | CGCTTGTGGTCTTAAAATTG+CGG | + | chr1.2:68405862-68405881 | MS.gene60520:CDS | 40.0% |
| ! | CTTGTGGTCTTAAAATTGCG+GGG | + | chr1.2:68405864-68405883 | MS.gene60520:CDS | 40.0% |
| ! | GCTTGTGGTCTTAAAATTGC+GGG | + | chr1.2:68405863-68405882 | MS.gene60520:CDS | 40.0% |
| !! | CAATAAGGTTGGTTTCTCCA+TGG | - | chr1.2:68405817-68405836 | None:intergenic | 40.0% |
| !! | TTAAGTTTTCGGTGCGTCTA+AGG | - | chr1.2:68405686-68405705 | None:intergenic | 40.0% |
| !! | TTCAAAAGCACTAGACCTCA+AGG | + | chr1.2:68405764-68405783 | MS.gene60520:CDS | 40.0% |
| AAAGTCAAGGTTGGGGATCT+TGG | - | chr1.2:68405601-68405620 | None:intergenic | 45.0% | |
| AACCAACCTTATTGCCCCTT+AGG | + | chr1.2:68405823-68405842 | MS.gene60520:CDS | 45.0% | |
| ACCGAAGAGGTTGAAAACAC+AGG | + | chr1.2:68406962-68406981 | MS.gene60520:intron | 45.0% | |
| AGACATGTTGGAGTTTCGGA+TGG | - | chr1.2:68406998-68407017 | None:intergenic | 45.0% | |
| ATCTCGTTGTCCACATCTTG+AGG | + | chr1.2:68406016-68406035 | MS.gene60520:CDS | 45.0% | |
| GACATAGGATCCGTAGTCAT+TGG | - | chr1.2:68405630-68405649 | None:intergenic | 45.0% | |
| GACCACAAGCGACTTAGAAA+TGG | - | chr1.2:68405853-68405872 | None:intergenic | 45.0% | |
| GGAGAGCTGCATATACAGAT+TGG | - | chr1.2:68405665-68405684 | None:intergenic | 45.0% | |
| GTCCTGCTCTTTATCGGATT+CGG | - | chr1.2:68405469-68405488 | None:intergenic | 45.0% | |
| GTTAGTATGATGTTGCGGGA+TGG | + | chr1.2:68407293-68407312 | MS.gene60520:intron | 45.0% | |
| TTTGCAGAACGTCAAGTGAC+GGG | - | chr1.2:68406169-68406188 | None:intergenic | 45.0% | |
| ! | CAAGTGACGGGGCATTAATT+TGG | - | chr1.2:68406157-68406176 | None:intergenic | 45.0% |
| ! | GTTGAAAACACAGGTTGGGT+GGG | + | chr1.2:68406971-68406990 | MS.gene60520:intron | 45.0% |
| ! | TCTTTATTTCCGCGTCTTGG+TGG | + | chr1.2:68406113-68406132 | MS.gene60520:CDS | 45.0% |
| ! | TGGATTGCTTTGGACGACAT+AGG | - | chr1.2:68405645-68405664 | None:intergenic | 45.0% |
| ! | TTGAAAACACAGGTTGGGTG+GGG | + | chr1.2:68406972-68406991 | MS.gene60520:intron | 45.0% |
| ACATTGGAACCACCAAGACG+CGG | - | chr1.2:68406125-68406144 | None:intergenic | 50.0% | |
| AGCCTAAGGGGCAATAAGGT+TGG | - | chr1.2:68405828-68405847 | None:intergenic | 50.0% | |
| CTCCGAATCCGATAAAGAGC+AGG | + | chr1.2:68405464-68405483 | MS.gene60520:CDS | 50.0% | |
| GGAAAGCCTAAGGGGCAATA+AGG | - | chr1.2:68405832-68405851 | None:intergenic | 50.0% | |
| TTGCAGAACGTCAAGTGACG+GGG | - | chr1.2:68406168-68406187 | None:intergenic | 50.0% | |
| ! | GACGGGGCATTAATTTGGAG+TGG | - | chr1.2:68406152-68406171 | None:intergenic | 50.0% |
| ! | GGTTGAAAACACAGGTTGGG+TGG | + | chr1.2:68406970-68406989 | MS.gene60520:intron | 50.0% |
| ! | GTGGTCTTAAAATTGCGGGG+CGG | + | chr1.2:68405867-68405886 | MS.gene60520:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 68405456 | 68407318 | 68405456 | ID=MS.gene60520 |
| chr1.2 | mRNA | 68405456 | 68407318 | 68405456 | ID=MS.gene60520.t1;Parent=MS.gene60520 |
| chr1.2 | exon | 68405456 | 68406355 | 68405456 | ID=MS.gene60520.t1.exon1;Parent=MS.gene60520.t1 |
| chr1.2 | CDS | 68405456 | 68406355 | 68405456 | ID=cds.MS.gene60520.t1;Parent=MS.gene60520.t1 |
| chr1.2 | exon | 68406434 | 68406586 | 68406434 | ID=MS.gene60520.t1.exon2;Parent=MS.gene60520.t1 |
| chr1.2 | CDS | 68406434 | 68406586 | 68406434 | ID=cds.MS.gene60520.t1;Parent=MS.gene60520.t1 |
| chr1.2 | exon | 68407118 | 68407204 | 68407118 | ID=MS.gene60520.t1.exon3;Parent=MS.gene60520.t1 |
| chr1.2 | CDS | 68407118 | 68407204 | 68407118 | ID=cds.MS.gene60520.t1;Parent=MS.gene60520.t1 |
| chr1.2 | exon | 68407298 | 68407318 | 68407298 | ID=MS.gene60520.t1.exon4;Parent=MS.gene60520.t1 |
| chr1.2 | CDS | 68407298 | 68407318 | 68407298 | ID=cds.MS.gene60520.t1;Parent=MS.gene60520.t1 |
| Gene Sequence |
| Protein sequence |
