Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90228.t1 | XP_024636490.1 | 89.6 | 355 | 36 | 1 | 1 | 355 | 1 | 354 | 6.00E-179 | 637.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90228.t1 | P0C2G6 | 29.5 | 380 | 216 | 12 | 12 | 354 | 7 | 371 | 2.4e-27 | 124.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90228.t1 | A0A396IEG6 | 80.5 | 395 | 40 | 2 | 1 | 359 | 1 | 394 | 3.2e-174 | 620.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053586 | MS.gene90228 | 0.811768 | 5.94E-51 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90228.t1 | MTR_4g093690 | 89.531 | 277 | 28 | 1 | 1 | 277 | 1 | 276 | 4.32e-177 | 496 |
| MS.gene90228.t1 | MTR_4g056020 | 59.429 | 350 | 134 | 6 | 10 | 355 | 1 | 346 | 1.93e-122 | 364 |
| MS.gene90228.t1 | MTR_4g056070 | 55.696 | 395 | 125 | 8 | 10 | 359 | 1 | 390 | 1.34e-120 | 358 |
| MS.gene90228.t1 | MTR_1g090883 | 60.218 | 367 | 127 | 11 | 1 | 357 | 1 | 358 | 3.22e-119 | 352 |
| MS.gene90228.t1 | MTR_4g056040 | 56.053 | 380 | 129 | 7 | 10 | 355 | 1 | 376 | 3.74e-116 | 350 |
| MS.gene90228.t1 | MTR_1g038710 | 57.542 | 358 | 140 | 7 | 5 | 353 | 6 | 360 | 2.74e-113 | 340 |
| MS.gene90228.t1 | MTR_4g055990 | 53.453 | 391 | 137 | 7 | 10 | 359 | 1 | 387 | 2.45e-112 | 339 |
| MS.gene90228.t1 | MTR_4g055990 | 53.453 | 391 | 137 | 7 | 10 | 359 | 1 | 387 | 2.54e-112 | 339 |
| MS.gene90228.t1 | MTR_4g056030 | 55.840 | 351 | 147 | 6 | 10 | 356 | 1 | 347 | 1.64e-109 | 331 |
| MS.gene90228.t1 | MTR_4g055580 | 52.806 | 392 | 139 | 7 | 9 | 359 | 91 | 477 | 1.13e-108 | 333 |
| MS.gene90228.t1 | MTR_1g090900 | 61.310 | 168 | 59 | 4 | 10 | 173 | 1 | 166 | 4.57e-55 | 182 |
| MS.gene90228.t1 | MTR_7g110920 | 46.640 | 253 | 93 | 5 | 107 | 355 | 1 | 215 | 1.22e-50 | 174 |
| MS.gene90228.t1 | MTR_4g056010 | 70.968 | 93 | 25 | 1 | 81 | 173 | 6 | 96 | 4.11e-33 | 120 |
| MS.gene90228.t1 | MTR_8g445780 | 32.718 | 379 | 194 | 17 | 2 | 355 | 3 | 345 | 1.81e-23 | 102 |
| MS.gene90228.t1 | MTR_7g098510 | 37.113 | 194 | 101 | 7 | 16 | 201 | 16 | 196 | 1.01e-20 | 94.0 |
| MS.gene90228.t1 | MTR_1g041245 | 33.673 | 196 | 116 | 5 | 18 | 208 | 11 | 197 | 2.02e-20 | 92.8 |
| MS.gene90228.t1 | MTR_3g107100 | 31.006 | 358 | 169 | 17 | 7 | 353 | 1 | 291 | 2.59e-19 | 89.7 |
| MS.gene90228.t1 | MTR_5g084070 | 31.481 | 324 | 184 | 15 | 14 | 322 | 9 | 309 | 3.56e-19 | 89.7 |
| MS.gene90228.t1 | MTR_7g032380 | 35.789 | 190 | 106 | 7 | 18 | 201 | 11 | 190 | 5.31e-19 | 88.2 |
| MS.gene90228.t1 | MTR_2g005990 | 33.168 | 202 | 109 | 7 | 18 | 201 | 6 | 199 | 1.02e-17 | 85.1 |
| MS.gene90228.t1 | MTR_8g014260 | 30.769 | 377 | 215 | 17 | 15 | 367 | 13 | 367 | 1.05e-17 | 85.5 |
| MS.gene90228.t1 | MTR_4g056020 | 76.000 | 50 | 12 | 0 | 306 | 355 | 1 | 50 | 1.06e-17 | 80.5 |
| MS.gene90228.t1 | MTR_7g007080 | 34.500 | 200 | 106 | 8 | 16 | 202 | 2 | 189 | 1.39e-17 | 84.7 |
| MS.gene90228.t1 | MTR_8g085430 | 34.010 | 197 | 107 | 6 | 18 | 201 | 11 | 197 | 1.54e-17 | 83.6 |
| MS.gene90228.t1 | MTR_8g058970 | 29.188 | 394 | 224 | 18 | 2 | 355 | 3 | 381 | 2.47e-17 | 84.3 |
| MS.gene90228.t1 | MTR_7g026500 | 34.419 | 215 | 113 | 8 | 1 | 201 | 1 | 201 | 3.05e-17 | 83.6 |
| MS.gene90228.t1 | MTR_8g062270 | 29.620 | 368 | 202 | 15 | 18 | 354 | 16 | 357 | 6.19e-17 | 83.2 |
| MS.gene90228.t1 | MTR_8g467800 | 30.886 | 395 | 229 | 18 | 14 | 389 | 16 | 385 | 6.58e-17 | 83.2 |
| MS.gene90228.t1 | MTR_6g022500 | 32.353 | 238 | 124 | 12 | 11 | 225 | 91 | 314 | 1.11e-16 | 82.4 |
| MS.gene90228.t1 | MTR_4g080773 | 29.288 | 379 | 225 | 13 | 18 | 364 | 19 | 386 | 1.76e-16 | 82.0 |
| MS.gene90228.t1 | MTR_4g080773 | 29.288 | 379 | 225 | 13 | 18 | 364 | 19 | 386 | 1.84e-16 | 81.6 |
| MS.gene90228.t1 | MTR_7g098570 | 36.458 | 192 | 101 | 7 | 18 | 201 | 20 | 198 | 2.20e-16 | 81.6 |
| MS.gene90228.t1 | MTR_7g034115 | 35.533 | 197 | 113 | 7 | 18 | 209 | 11 | 198 | 2.35e-16 | 80.9 |
| MS.gene90228.t1 | MTR_8g468810 | 29.195 | 298 | 182 | 13 | 18 | 299 | 25 | 309 | 4.59e-16 | 79.3 |
| MS.gene90228.t1 | MTR_8g468810 | 29.195 | 298 | 182 | 13 | 18 | 299 | 25 | 309 | 5.97e-16 | 79.0 |
| MS.gene90228.t1 | MTR_5g058350 | 31.884 | 207 | 97 | 7 | 18 | 222 | 8 | 172 | 7.77e-16 | 75.9 |
| MS.gene90228.t1 | MTR_6g022360 | 33.659 | 205 | 103 | 9 | 10 | 201 | 26 | 210 | 7.87e-16 | 79.3 |
| MS.gene90228.t1 | MTR_8g468810 | 29.195 | 298 | 182 | 13 | 18 | 299 | 25 | 309 | 8.74e-16 | 79.0 |
| MS.gene90228.t1 | MTR_8g468810 | 29.195 | 298 | 182 | 13 | 18 | 299 | 25 | 309 | 8.77e-16 | 79.0 |
| MS.gene90228.t1 | MTR_5g061680 | 33.333 | 201 | 108 | 8 | 18 | 206 | 11 | 197 | 8.94e-16 | 78.6 |
| MS.gene90228.t1 | MTR_3g048290 | 28.997 | 369 | 221 | 14 | 14 | 355 | 19 | 373 | 1.47e-15 | 79.0 |
| MS.gene90228.t1 | MTR_8g468810 | 29.195 | 298 | 182 | 13 | 18 | 299 | 25 | 309 | 1.49e-15 | 79.0 |
| MS.gene90228.t1 | MTR_5g073420 | 32.821 | 195 | 109 | 6 | 18 | 201 | 11 | 194 | 1.77e-15 | 78.2 |
| MS.gene90228.t1 | MTR_8g467800 | 32.258 | 310 | 176 | 13 | 14 | 305 | 16 | 309 | 1.87e-15 | 77.8 |
| MS.gene90228.t1 | MTR_4g050250 | 31.111 | 225 | 120 | 9 | 4 | 200 | 7 | 224 | 2.06e-15 | 78.2 |
| MS.gene90228.t1 | MTR_7g056287 | 26.211 | 351 | 176 | 14 | 18 | 357 | 3 | 281 | 2.20e-15 | 77.8 |
| MS.gene90228.t1 | MTR_7g098480 | 34.737 | 190 | 111 | 6 | 16 | 201 | 16 | 196 | 2.86e-15 | 78.2 |
| MS.gene90228.t1 | MTR_1g108820 | 32.487 | 197 | 119 | 7 | 18 | 211 | 8 | 193 | 3.89e-15 | 76.6 |
| MS.gene90228.t1 | MTR_1g085120 | 33.673 | 196 | 105 | 7 | 18 | 202 | 179 | 360 | 4.57e-15 | 77.4 |
| MS.gene90228.t1 | MTR_3g108560 | 28.857 | 350 | 169 | 17 | 15 | 355 | 17 | 295 | 5.23e-15 | 75.9 |
| MS.gene90228.t1 | MTR_3g107120 | 27.095 | 358 | 172 | 12 | 18 | 353 | 9 | 299 | 6.09e-15 | 76.6 |
| MS.gene90228.t1 | MTR_6g045333 | 27.528 | 356 | 177 | 14 | 18 | 356 | 61 | 352 | 6.91e-15 | 76.6 |
| MS.gene90228.t1 | MTR_1g085120 | 33.673 | 196 | 105 | 7 | 18 | 202 | 167 | 348 | 8.29e-15 | 77.0 |
| MS.gene90228.t1 | MTR_1g108820 | 32.836 | 201 | 113 | 7 | 18 | 211 | 8 | 193 | 9.57e-15 | 75.9 |
| MS.gene90228.t1 | MTR_8g469020 | 31.513 | 238 | 133 | 9 | 18 | 230 | 7 | 239 | 9.89e-15 | 76.3 |
| MS.gene90228.t1 | MTR_3g108560 | 28.857 | 350 | 169 | 17 | 15 | 355 | 17 | 295 | 9.92e-15 | 75.9 |
| MS.gene90228.t1 | MTR_1g085120 | 33.673 | 196 | 105 | 7 | 18 | 202 | 92 | 273 | 1.11e-14 | 76.3 |
| MS.gene90228.t1 | MTR_7g056277 | 26.437 | 348 | 173 | 14 | 18 | 354 | 259 | 534 | 1.39e-14 | 76.3 |
| MS.gene90228.t1 | MTR_3g036250 | 31.731 | 208 | 117 | 7 | 15 | 211 | 2 | 195 | 1.60e-14 | 75.1 |
| MS.gene90228.t1 | MTR_7g060470 | 32.487 | 197 | 106 | 6 | 18 | 201 | 3 | 185 | 1.66e-14 | 75.1 |
| MS.gene90228.t1 | MTR_8g058965 | 32.381 | 210 | 105 | 10 | 18 | 200 | 13 | 212 | 1.71e-14 | 75.5 |
| MS.gene90228.t1 | MTR_2g007500 | 33.040 | 227 | 116 | 11 | 18 | 227 | 14 | 221 | 1.98e-14 | 74.3 |
| MS.gene90228.t1 | MTR_3g107160 | 26.884 | 398 | 202 | 18 | 14 | 398 | 6 | 327 | 2.17e-14 | 74.7 |
| MS.gene90228.t1 | MTR_7g033990 | 26.801 | 347 | 179 | 13 | 18 | 355 | 11 | 291 | 3.03e-14 | 74.7 |
| MS.gene90228.t1 | MTR_5g058100 | 26.934 | 349 | 179 | 12 | 18 | 355 | 9 | 292 | 4.61e-14 | 73.9 |
| MS.gene90228.t1 | MTR_4g081030 | 29.467 | 319 | 178 | 15 | 18 | 314 | 17 | 310 | 5.25e-14 | 73.6 |
| MS.gene90228.t1 | MTR_3g023630 | 32.995 | 197 | 102 | 10 | 18 | 201 | 8 | 187 | 5.99e-14 | 73.6 |
| MS.gene90228.t1 | MTR_7g055943 | 29.719 | 249 | 142 | 9 | 12 | 251 | 34 | 258 | 6.87e-14 | 73.6 |
| MS.gene90228.t1 | MTR_5g058000 | 31.683 | 202 | 93 | 8 | 18 | 199 | 8 | 184 | 7.36e-14 | 73.2 |
| MS.gene90228.t1 | MTR_7g032370 | 34.444 | 180 | 97 | 8 | 30 | 201 | 2 | 168 | 9.03e-14 | 72.8 |
| MS.gene90228.t1 | MTR_5g073340 | 25.731 | 342 | 169 | 16 | 18 | 355 | 8 | 268 | 9.32e-14 | 72.0 |
| MS.gene90228.t1 | MTR_7g007370 | 32.990 | 194 | 86 | 6 | 9 | 202 | 8 | 157 | 1.25e-13 | 72.0 |
| MS.gene90228.t1 | MTR_4g080787 | 30.027 | 373 | 207 | 20 | 18 | 355 | 19 | 372 | 1.94e-13 | 72.4 |
| MS.gene90228.t1 | MTR_5g045510 | 33.158 | 190 | 108 | 9 | 18 | 200 | 12 | 189 | 2.79e-13 | 71.2 |
| MS.gene90228.t1 | MTR_7g033945 | 33.929 | 168 | 92 | 6 | 18 | 173 | 11 | 171 | 3.79e-13 | 68.2 |
| MS.gene90228.t1 | MTR_3g040700 | 32.178 | 202 | 118 | 9 | 18 | 211 | 43 | 233 | 4.27e-13 | 71.2 |
| MS.gene90228.t1 | MTR_8g062010 | 30.097 | 206 | 120 | 8 | 18 | 211 | 9 | 202 | 4.45e-13 | 71.2 |
| MS.gene90228.t1 | MTR_7g115270 | 30.928 | 194 | 118 | 5 | 18 | 201 | 12 | 199 | 5.30e-13 | 70.9 |
| MS.gene90228.t1 | MTR_8g468760 | 31.783 | 258 | 123 | 10 | 14 | 253 | 5 | 227 | 5.40e-13 | 70.9 |
| MS.gene90228.t1 | MTR_7g088260 | 26.801 | 347 | 177 | 11 | 18 | 355 | 91 | 369 | 7.27e-13 | 70.5 |
| MS.gene90228.t1 | MTR_2g007400 | 26.097 | 433 | 223 | 19 | 18 | 428 | 12 | 369 | 8.04e-13 | 70.1 |
| MS.gene90228.t1 | MTR_8g070950 | 35.354 | 198 | 102 | 10 | 15 | 200 | 12 | 195 | 8.23e-13 | 70.5 |
| MS.gene90228.t1 | MTR_2g007450 | 24.289 | 387 | 207 | 13 | 5 | 361 | 3 | 333 | 1.04e-12 | 70.1 |
| MS.gene90228.t1 | MTR_4g039440 | 34.359 | 195 | 98 | 9 | 18 | 201 | 34 | 209 | 1.14e-12 | 69.7 |
| MS.gene90228.t1 | MTR_3g114200 | 40.476 | 84 | 49 | 1 | 1 | 83 | 1 | 84 | 1.24e-12 | 65.9 |
| MS.gene90228.t1 | MTR_5g007410 | 24.065 | 428 | 232 | 19 | 21 | 432 | 29 | 379 | 1.39e-12 | 69.7 |
| MS.gene90228.t1 | MTR_6g040270 | 32.057 | 209 | 112 | 8 | 1 | 201 | 1 | 187 | 1.80e-12 | 68.9 |
| MS.gene90228.t1 | MTR_1g066830 | 29.208 | 202 | 103 | 7 | 18 | 201 | 8 | 187 | 2.37e-12 | 68.6 |
| MS.gene90228.t1 | MTR_7g033915 | 26.074 | 349 | 161 | 15 | 18 | 355 | 11 | 273 | 2.98e-12 | 68.2 |
| MS.gene90228.t1 | MTR_3g108150 | 32.796 | 186 | 112 | 4 | 18 | 201 | 13 | 187 | 3.36e-12 | 68.2 |
| MS.gene90228.t1 | MTR_3g071850 | 31.980 | 197 | 114 | 8 | 16 | 202 | 22 | 208 | 3.63e-12 | 68.9 |
| MS.gene90228.t1 | MTR_8g062080 | 29.577 | 213 | 126 | 8 | 1 | 200 | 6 | 207 | 4.74e-12 | 68.2 |
| MS.gene90228.t1 | MTR_6g011460 | 26.230 | 366 | 157 | 17 | 18 | 355 | 46 | 326 | 6.55e-12 | 67.4 |
| MS.gene90228.t1 | MTR_5g080710 | 32.963 | 270 | 155 | 12 | 14 | 275 | 29 | 280 | 8.58e-12 | 67.4 |
| MS.gene90228.t1 | MTR_7g023310 | 27.273 | 220 | 146 | 7 | 15 | 229 | 23 | 233 | 8.85e-12 | 67.0 |
| MS.gene90228.t1 | MTR_8g014160 | 30.032 | 313 | 179 | 13 | 18 | 305 | 41 | 338 | 9.24e-12 | 67.0 |
| MS.gene90228.t1 | MTR_7g056447 | 34.737 | 190 | 104 | 9 | 18 | 200 | 9 | 185 | 9.73e-12 | 65.9 |
| MS.gene90228.t1 | MTR_8g468840 | 27.595 | 395 | 237 | 18 | 18 | 389 | 14 | 382 | 1.04e-11 | 67.0 |
| MS.gene90228.t1 | MTR_0571s0010 | 46.667 | 60 | 32 | 0 | 4 | 63 | 18 | 77 | 1.30e-11 | 61.6 |
| MS.gene90228.t1 | MTR_5g045170 | 30.542 | 203 | 92 | 8 | 21 | 200 | 17 | 193 | 1.34e-11 | 66.2 |
| MS.gene90228.t1 | MTR_7g081290 | 36.792 | 106 | 63 | 2 | 1 | 102 | 1 | 106 | 1.49e-11 | 64.7 |
| MS.gene90228.t1 | MTR_4g134150 | 29.570 | 186 | 115 | 6 | 18 | 201 | 14 | 185 | 1.84e-11 | 64.3 |
| MS.gene90228.t1 | MTR_8g077460 | 32.020 | 203 | 113 | 8 | 15 | 200 | 7 | 201 | 2.34e-11 | 65.5 |
| MS.gene90228.t1 | MTR_7g021630 | 26.593 | 361 | 225 | 14 | 15 | 355 | 14 | 354 | 2.47e-11 | 65.5 |
| MS.gene90228.t1 | MTR_2g100590 | 30.476 | 210 | 118 | 6 | 15 | 207 | 39 | 237 | 2.53e-11 | 65.5 |
| MS.gene90228.t1 | MTR_7g021630 | 26.593 | 361 | 225 | 14 | 15 | 355 | 14 | 354 | 2.62e-11 | 65.1 |
| MS.gene90228.t1 | MTR_3g099830 | 25.450 | 389 | 194 | 17 | 18 | 397 | 12 | 313 | 2.67e-11 | 65.5 |
| MS.gene90228.t1 | MTR_3g082890 | 27.299 | 348 | 196 | 14 | 15 | 355 | 14 | 311 | 2.80e-11 | 65.5 |
| MS.gene90228.t1 | MTR_2g100590 | 30.476 | 210 | 118 | 6 | 15 | 207 | 39 | 237 | 3.02e-11 | 65.5 |
| MS.gene90228.t1 | MTR_0009s0080 | 25.000 | 348 | 186 | 12 | 21 | 355 | 21 | 306 | 3.02e-11 | 65.5 |
| MS.gene90228.t1 | MTR_8g062310 | 28.796 | 191 | 117 | 7 | 16 | 201 | 23 | 199 | 3.42e-11 | 65.1 |
| MS.gene90228.t1 | MTR_2g100590 | 30.476 | 210 | 118 | 6 | 15 | 207 | 39 | 237 | 4.72e-11 | 65.1 |
| MS.gene90228.t1 | MTR_8g467790 | 31.731 | 208 | 97 | 10 | 18 | 200 | 148 | 335 | 5.61e-11 | 64.7 |
| MS.gene90228.t1 | MTR_7g033940 | 34.483 | 116 | 71 | 3 | 21 | 132 | 97 | 211 | 6.54e-11 | 62.4 |
| MS.gene90228.t1 | MTR_5g460900 | 27.933 | 358 | 223 | 13 | 18 | 356 | 18 | 359 | 7.27e-11 | 63.9 |
| MS.gene90228.t1 | MTR_0543s0010 | 31.959 | 194 | 100 | 8 | 18 | 201 | 86 | 257 | 7.47e-11 | 64.3 |
| MS.gene90228.t1 | MTR_0492s0020 | 31.959 | 194 | 100 | 8 | 18 | 201 | 86 | 257 | 8.04e-11 | 63.9 |
| MS.gene90228.t1 | MTR_4g080590 | 28.611 | 360 | 225 | 16 | 18 | 361 | 23 | 366 | 8.43e-11 | 63.9 |
| MS.gene90228.t1 | MTR_6g022390 | 33.835 | 133 | 66 | 4 | 18 | 131 | 5 | 134 | 8.55e-11 | 60.5 |
| MS.gene90228.t1 | MTR_3g082890 | 27.299 | 348 | 196 | 14 | 15 | 355 | 94 | 391 | 8.71e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90228.t1 | AT4G00320 | 29.008 | 393 | 225 | 13 | 12 | 365 | 7 | 384 | 1.88e-27 | 114 |
| MS.gene90228.t1 | AT3G59190 | 27.614 | 373 | 224 | 13 | 18 | 357 | 12 | 371 | 2.89e-26 | 109 |
| MS.gene90228.t1 | AT3G59190 | 27.838 | 370 | 221 | 13 | 18 | 354 | 12 | 368 | 1.18e-25 | 109 |
| MS.gene90228.t1 | AT5G41830 | 29.843 | 382 | 212 | 14 | 12 | 354 | 7 | 371 | 5.30e-25 | 107 |
| MS.gene90228.t1 | AT3G59230 | 27.394 | 376 | 221 | 10 | 18 | 354 | 12 | 374 | 1.07e-24 | 106 |
| MS.gene90228.t1 | AT4G14103 | 28.415 | 366 | 213 | 16 | 18 | 354 | 8 | 353 | 1.29e-24 | 105 |
| MS.gene90228.t1 | AT4G14103 | 28.415 | 366 | 213 | 16 | 18 | 354 | 8 | 353 | 1.29e-24 | 105 |
| MS.gene90228.t1 | AT4G14103 | 28.184 | 369 | 216 | 16 | 18 | 357 | 8 | 356 | 2.12e-24 | 105 |
| MS.gene90228.t1 | AT4G26340 | 29.363 | 361 | 218 | 13 | 18 | 366 | 2 | 337 | 3.69e-24 | 104 |
| MS.gene90228.t1 | AT1G58310 | 28.421 | 380 | 217 | 13 | 18 | 354 | 8 | 375 | 6.06e-23 | 101 |
| MS.gene90228.t1 | AT3G59200 | 28.497 | 386 | 203 | 14 | 18 | 357 | 7 | 365 | 6.15e-22 | 97.1 |
| MS.gene90228.t1 | AT4G14096 | 28.099 | 363 | 211 | 15 | 18 | 354 | 8 | 346 | 6.91e-22 | 98.2 |
| MS.gene90228.t1 | AT4G14096 | 28.099 | 363 | 211 | 15 | 18 | 354 | 8 | 346 | 6.91e-22 | 98.2 |
| MS.gene90228.t1 | AT1G06630 | 29.491 | 373 | 224 | 14 | 3 | 357 | 2 | 353 | 1.99e-21 | 95.5 |
| MS.gene90228.t1 | AT1G06630 | 29.491 | 373 | 224 | 14 | 3 | 357 | 2 | 353 | 1.99e-21 | 95.5 |
| MS.gene90228.t1 | AT3G59200 | 28.646 | 384 | 201 | 14 | 18 | 355 | 7 | 363 | 2.46e-21 | 96.7 |
| MS.gene90228.t1 | AT3G59160 | 26.598 | 391 | 220 | 14 | 18 | 354 | 13 | 390 | 4.13e-21 | 95.9 |
| MS.gene90228.t1 | AT4G10400 | 30.445 | 427 | 224 | 23 | 18 | 421 | 2 | 378 | 6.36e-21 | 94.7 |
| MS.gene90228.t1 | AT4G10400 | 30.445 | 427 | 224 | 23 | 18 | 421 | 2 | 378 | 6.36e-21 | 94.7 |
| MS.gene90228.t1 | AT4G10400 | 30.445 | 427 | 224 | 23 | 18 | 421 | 2 | 378 | 6.36e-21 | 94.7 |
| MS.gene90228.t1 | AT5G41840 | 26.823 | 384 | 220 | 11 | 18 | 354 | 14 | 383 | 6.71e-21 | 95.5 |
| MS.gene90228.t1 | AT1G06630 | 30.108 | 372 | 219 | 14 | 3 | 355 | 2 | 351 | 8.71e-21 | 94.4 |
| MS.gene90228.t1 | AT1G06630 | 30.108 | 372 | 219 | 14 | 3 | 355 | 2 | 351 | 8.71e-21 | 94.4 |
| MS.gene90228.t1 | AT1G06630 | 30.108 | 372 | 219 | 14 | 3 | 355 | 2 | 351 | 8.71e-21 | 94.4 |
| MS.gene90228.t1 | AT1G06630 | 30.108 | 372 | 219 | 14 | 3 | 355 | 2 | 351 | 8.71e-21 | 94.4 |
| MS.gene90228.t1 | AT3G59170 | 28.715 | 397 | 207 | 15 | 18 | 354 | 7 | 387 | 9.61e-21 | 94.7 |
| MS.gene90228.t1 | AT3G03030 | 27.273 | 374 | 221 | 11 | 18 | 354 | 2 | 361 | 1.17e-20 | 94.4 |
| MS.gene90228.t1 | AT3G42770 | 28.058 | 417 | 238 | 17 | 23 | 404 | 4 | 393 | 1.30e-20 | 94.7 |
| MS.gene90228.t1 | AT1G06630 | 30.108 | 372 | 219 | 14 | 3 | 355 | 11 | 360 | 1.47e-20 | 93.6 |
| MS.gene90228.t1 | AT1G06630 | 29.650 | 371 | 222 | 14 | 3 | 355 | 2 | 351 | 2.49e-20 | 93.6 |
| MS.gene90228.t1 | AT3G58860 | 25.978 | 358 | 232 | 9 | 15 | 356 | 4 | 344 | 4.51e-19 | 89.7 |
| MS.gene90228.t1 | AT4G22280 | 31.609 | 348 | 213 | 13 | 18 | 357 | 2 | 332 | 4.60e-19 | 88.2 |
| MS.gene90228.t1 | AT3G58920 | 28.042 | 378 | 234 | 11 | 18 | 362 | 2 | 374 | 5.31e-19 | 89.4 |
| MS.gene90228.t1 | AT3G58940 | 27.855 | 359 | 215 | 12 | 18 | 355 | 2 | 337 | 9.20e-19 | 89.4 |
| MS.gene90228.t1 | AT3G58940 | 27.855 | 359 | 215 | 12 | 18 | 355 | 2 | 337 | 9.20e-19 | 89.4 |
| MS.gene90228.t1 | AT4G22280 | 31.792 | 346 | 211 | 13 | 18 | 355 | 2 | 330 | 1.47e-18 | 87.8 |
| MS.gene90228.t1 | AT3G03040 | 27.419 | 372 | 218 | 11 | 18 | 354 | 2 | 356 | 1.72e-18 | 87.8 |
| MS.gene90228.t1 | AT4G00315 | 28.846 | 364 | 206 | 18 | 18 | 353 | 2 | 340 | 2.28e-18 | 87.4 |
| MS.gene90228.t1 | AT3G59240 | 26.316 | 361 | 225 | 11 | 18 | 354 | 8 | 351 | 2.37e-18 | 87.8 |
| MS.gene90228.t1 | AT4G09920 | 32.237 | 304 | 165 | 15 | 18 | 304 | 2 | 281 | 3.79e-18 | 84.7 |
| MS.gene90228.t1 | AT4G09920 | 32.237 | 304 | 165 | 15 | 18 | 304 | 2 | 281 | 3.79e-18 | 84.7 |
| MS.gene90228.t1 | AT4G09920 | 32.237 | 304 | 165 | 15 | 18 | 304 | 2 | 281 | 3.79e-18 | 84.7 |
| MS.gene90228.t1 | AT3G58960 | 27.348 | 362 | 229 | 11 | 18 | 356 | 2 | 352 | 8.35e-18 | 85.9 |
| MS.gene90228.t1 | AT4G09920 | 32.119 | 302 | 164 | 15 | 18 | 302 | 2 | 279 | 9.88e-18 | 84.0 |
| MS.gene90228.t1 | AT4G09920 | 32.119 | 302 | 164 | 15 | 18 | 302 | 2 | 279 | 9.88e-18 | 84.0 |
| MS.gene90228.t1 | AT2G26860 | 29.692 | 357 | 210 | 14 | 18 | 358 | 2 | 333 | 2.75e-17 | 84.0 |
| MS.gene90228.t1 | AT2G26860 | 29.692 | 357 | 210 | 14 | 18 | 358 | 2 | 333 | 2.75e-17 | 84.0 |
| MS.gene90228.t1 | AT3G03030 | 27.964 | 329 | 182 | 12 | 18 | 305 | 2 | 316 | 4.90e-17 | 82.4 |
| MS.gene90228.t1 | AT3G59250 | 27.143 | 350 | 202 | 9 | 18 | 354 | 7 | 316 | 4.93e-17 | 83.2 |
| MS.gene90228.t1 | AT5G53635 | 28.729 | 362 | 208 | 17 | 21 | 356 | 3 | 340 | 9.13e-17 | 82.4 |
| MS.gene90228.t1 | AT3G50710 | 27.557 | 352 | 215 | 13 | 18 | 355 | 2 | 327 | 9.18e-17 | 82.4 |
| MS.gene90228.t1 | AT5G38396 | 27.733 | 375 | 215 | 12 | 18 | 355 | 2 | 357 | 1.42e-16 | 82.0 |
| MS.gene90228.t1 | AT5G62970 | 28.457 | 376 | 202 | 17 | 18 | 353 | 2 | 350 | 2.45e-16 | 81.3 |
| MS.gene90228.t1 | AT2G29930 | 26.989 | 352 | 227 | 12 | 18 | 355 | 12 | 347 | 2.77e-16 | 81.3 |
| MS.gene90228.t1 | AT2G29930 | 26.989 | 352 | 227 | 12 | 18 | 355 | 12 | 347 | 2.77e-16 | 81.3 |
| MS.gene90228.t1 | AT3G52680 | 27.957 | 372 | 212 | 12 | 1 | 353 | 6 | 340 | 3.30e-16 | 80.1 |
| MS.gene90228.t1 | AT5G56420 | 26.891 | 357 | 230 | 14 | 18 | 366 | 6 | 339 | 4.09e-16 | 80.5 |
| MS.gene90228.t1 | AT5G56420 | 26.891 | 357 | 230 | 14 | 18 | 366 | 6 | 339 | 4.09e-16 | 80.5 |
| MS.gene90228.t1 | AT5G56420 | 26.891 | 357 | 230 | 14 | 18 | 366 | 6 | 339 | 4.09e-16 | 80.5 |
| MS.gene90228.t1 | AT5G25860 | 26.558 | 369 | 225 | 14 | 18 | 355 | 12 | 365 | 5.04e-16 | 80.5 |
| MS.gene90228.t1 | AT5G56440 | 27.907 | 344 | 215 | 15 | 18 | 353 | 2 | 320 | 6.40e-16 | 79.7 |
| MS.gene90228.t1 | AT3G44060 | 28.492 | 358 | 208 | 17 | 23 | 356 | 4 | 337 | 8.75e-16 | 79.3 |
| MS.gene90228.t1 | AT3G52680 | 28.184 | 369 | 215 | 13 | 1 | 353 | 6 | 340 | 9.70e-16 | 79.3 |
| MS.gene90228.t1 | AT3G49030 | 28.883 | 367 | 220 | 17 | 18 | 369 | 21 | 361 | 1.02e-15 | 79.3 |
| MS.gene90228.t1 | AT4G15060 | 27.595 | 395 | 237 | 18 | 15 | 387 | 23 | 390 | 1.11e-15 | 79.0 |
| MS.gene90228.t1 | AT3G60040 | 27.394 | 376 | 222 | 15 | 13 | 355 | 6 | 363 | 1.18e-15 | 79.7 |
| MS.gene90228.t1 | AT3G60040 | 27.436 | 390 | 230 | 17 | 13 | 368 | 223 | 593 | 1.20e-15 | 79.7 |
| MS.gene90228.t1 | AT3G60040 | 27.436 | 390 | 230 | 17 | 13 | 368 | 225 | 595 | 1.29e-15 | 79.7 |
| MS.gene90228.t1 | AT3G60040 | 27.394 | 376 | 222 | 15 | 13 | 355 | 226 | 583 | 1.67e-15 | 79.3 |
| MS.gene90228.t1 | AT3G60040 | 27.394 | 376 | 222 | 15 | 13 | 355 | 225 | 582 | 1.71e-15 | 79.3 |
| MS.gene90228.t1 | AT3G59210 | 28.532 | 361 | 214 | 14 | 23 | 354 | 12 | 357 | 1.73e-15 | 79.0 |
| MS.gene90228.t1 | AT3G59210 | 28.532 | 361 | 214 | 14 | 23 | 354 | 12 | 357 | 1.73e-15 | 79.0 |
| MS.gene90228.t1 | AT3G59210 | 28.532 | 361 | 214 | 14 | 23 | 354 | 12 | 357 | 1.73e-15 | 79.0 |
| MS.gene90228.t1 | AT3G59210 | 28.532 | 361 | 214 | 14 | 23 | 354 | 12 | 357 | 1.73e-15 | 79.0 |
| MS.gene90228.t1 | AT3G59210 | 28.532 | 361 | 214 | 14 | 23 | 354 | 12 | 357 | 1.73e-15 | 79.0 |
| MS.gene90228.t1 | AT3G62430 | 27.528 | 356 | 224 | 12 | 18 | 355 | 2 | 341 | 1.87e-15 | 78.6 |
| MS.gene90228.t1 | AT5G53840 | 27.957 | 372 | 233 | 9 | 16 | 371 | 16 | 368 | 2.84e-15 | 77.8 |
| MS.gene90228.t1 | AT3G62440 | 28.533 | 375 | 215 | 16 | 18 | 355 | 2 | 360 | 2.90e-15 | 78.2 |
| MS.gene90228.t1 | AT1G06630 | 29.688 | 320 | 187 | 13 | 3 | 304 | 2 | 301 | 4.70e-15 | 75.9 |
| MS.gene90228.t1 | AT3G58930 | 25.393 | 382 | 226 | 12 | 18 | 355 | 2 | 368 | 6.09e-15 | 77.0 |
| MS.gene90228.t1 | AT3G58930 | 25.393 | 382 | 226 | 12 | 18 | 355 | 2 | 368 | 6.09e-15 | 77.0 |
| MS.gene90228.t1 | AT3G58930 | 25.393 | 382 | 226 | 12 | 18 | 355 | 2 | 368 | 6.09e-15 | 77.0 |
| MS.gene90228.t1 | AT4G13960 | 26.810 | 373 | 214 | 11 | 18 | 355 | 2 | 350 | 6.66e-15 | 77.0 |
| MS.gene90228.t1 | AT4G13960 | 26.810 | 373 | 214 | 11 | 18 | 355 | 2 | 350 | 6.66e-15 | 77.0 |
| MS.gene90228.t1 | AT5G60610 | 28.895 | 353 | 199 | 15 | 18 | 353 | 2 | 319 | 7.44e-15 | 76.3 |
| MS.gene90228.t1 | AT5G60610 | 28.895 | 353 | 199 | 15 | 18 | 353 | 2 | 319 | 7.44e-15 | 76.3 |
| MS.gene90228.t1 | AT3G58980 | 27.083 | 384 | 223 | 17 | 18 | 366 | 2 | 363 | 9.77e-15 | 76.6 |
| MS.gene90228.t1 | AT4G26350 | 26.944 | 360 | 214 | 15 | 18 | 356 | 2 | 333 | 1.02e-14 | 76.3 |
| MS.gene90228.t1 | AT3G26922 | 31.507 | 292 | 173 | 14 | 18 | 300 | 14 | 287 | 1.39e-14 | 74.7 |
| MS.gene90228.t1 | AT3G26922 | 31.507 | 292 | 173 | 14 | 18 | 300 | 14 | 287 | 1.39e-14 | 74.7 |
| MS.gene90228.t1 | AT3G26930 | 29.474 | 380 | 199 | 18 | 18 | 372 | 21 | 356 | 2.79e-14 | 75.1 |
| MS.gene90228.t1 | AT5G41630 | 25.858 | 379 | 225 | 12 | 18 | 354 | 12 | 376 | 2.80e-14 | 75.1 |
| MS.gene90228.t1 | AT1G55660 | 34.343 | 198 | 110 | 8 | 18 | 205 | 53 | 240 | 2.91e-14 | 74.3 |
| MS.gene90228.t1 | AT1G78760 | 26.099 | 364 | 221 | 13 | 16 | 355 | 14 | 353 | 3.06e-14 | 74.7 |
| MS.gene90228.t1 | AT2G42720 | 27.945 | 365 | 214 | 16 | 18 | 354 | 2 | 345 | 3.27e-14 | 74.7 |
| MS.gene90228.t1 | AT1G16930 | 26.902 | 368 | 221 | 16 | 18 | 360 | 15 | 359 | 3.59e-14 | 74.7 |
| MS.gene90228.t1 | AT1G16930 | 26.902 | 368 | 221 | 16 | 18 | 360 | 15 | 359 | 3.59e-14 | 74.7 |
| MS.gene90228.t1 | AT1G16930 | 26.902 | 368 | 221 | 16 | 18 | 360 | 15 | 359 | 3.59e-14 | 74.7 |
| MS.gene90228.t1 | AT1G55660 | 34.343 | 198 | 110 | 8 | 18 | 205 | 53 | 240 | 4.25e-14 | 74.7 |
| MS.gene90228.t1 | AT5G56380 | 27.835 | 388 | 229 | 15 | 18 | 378 | 2 | 365 | 5.58e-14 | 73.9 |
| MS.gene90228.t1 | AT5G56380 | 27.835 | 388 | 229 | 15 | 18 | 378 | 2 | 365 | 5.58e-14 | 73.9 |
| MS.gene90228.t1 | AT3G59000 | 26.842 | 380 | 214 | 12 | 18 | 355 | 2 | 359 | 6.39e-14 | 73.9 |
| MS.gene90228.t1 | AT5G56370 | 27.778 | 342 | 211 | 12 | 18 | 353 | 2 | 313 | 7.61e-14 | 72.8 |
| MS.gene90228.t1 | AT3G59150 | 27.933 | 358 | 209 | 15 | 1 | 330 | 1 | 337 | 7.95e-14 | 73.6 |
| MS.gene90228.t1 | AT2G04230 | 28.415 | 366 | 224 | 17 | 18 | 368 | 13 | 355 | 8.39e-14 | 73.6 |
| MS.gene90228.t1 | AT4G00160 | 26.542 | 373 | 228 | 13 | 1 | 358 | 1 | 342 | 1.64e-13 | 72.4 |
| MS.gene90228.t1 | AT5G56410 | 30.216 | 278 | 133 | 10 | 20 | 250 | 7 | 270 | 1.74e-13 | 72.8 |
| MS.gene90228.t1 | AT3G58880 | 27.520 | 367 | 219 | 14 | 18 | 355 | 3 | 351 | 1.90e-13 | 72.4 |
| MS.gene90228.t1 | AT5G56370 | 27.778 | 342 | 211 | 12 | 18 | 353 | 2 | 313 | 2.18e-13 | 72.0 |
| MS.gene90228.t1 | AT5G56370 | 27.778 | 342 | 211 | 12 | 18 | 353 | 2 | 313 | 2.18e-13 | 72.0 |
| MS.gene90228.t1 | AT5G22670 | 27.763 | 389 | 223 | 18 | 18 | 378 | 11 | 369 | 3.46e-13 | 71.6 |
| MS.gene90228.t1 | AT4G15060 | 31.873 | 251 | 146 | 11 | 16 | 255 | 170 | 406 | 3.50e-13 | 72.0 |
| MS.gene90228.t1 | AT2G26030 | 26.400 | 375 | 221 | 17 | 17 | 359 | 3 | 354 | 5.06e-13 | 70.9 |
| MS.gene90228.t1 | AT5G22610 | 27.247 | 356 | 209 | 12 | 18 | 355 | 18 | 341 | 5.47e-13 | 70.9 |
| MS.gene90228.t1 | AT2G26030 | 26.667 | 375 | 220 | 17 | 17 | 359 | 3 | 354 | 5.65e-13 | 70.9 |
| MS.gene90228.t1 | AT2G26030 | 26.667 | 375 | 220 | 17 | 17 | 359 | 3 | 354 | 5.65e-13 | 70.9 |
| MS.gene90228.t1 | AT4G13985 | 26.943 | 386 | 240 | 17 | 1 | 359 | 1 | 371 | 7.10e-13 | 70.5 |
| MS.gene90228.t1 | AT1G52650 | 25.867 | 375 | 216 | 13 | 18 | 355 | 2 | 351 | 1.81e-12 | 69.3 |
| MS.gene90228.t1 | AT5G38590 | 25.698 | 358 | 210 | 13 | 18 | 357 | 2 | 321 | 1.95e-12 | 68.9 |
| MS.gene90228.t1 | AT1G69630 | 25.708 | 424 | 266 | 16 | 1 | 392 | 1 | 407 | 2.02e-12 | 69.3 |
| MS.gene90228.t1 | AT1G78750 | 25.510 | 392 | 249 | 14 | 1 | 364 | 1 | 377 | 2.44e-12 | 68.9 |
| MS.gene90228.t1 | AT1G78750 | 25.510 | 392 | 249 | 14 | 1 | 364 | 1 | 377 | 2.44e-12 | 68.9 |
| MS.gene90228.t1 | AT5G41830 | 28.302 | 318 | 182 | 13 | 66 | 354 | 20 | 320 | 5.14e-12 | 68.2 |
| MS.gene90228.t1 | AT3G49150 | 25.905 | 359 | 231 | 14 | 18 | 354 | 16 | 361 | 8.02e-12 | 67.4 |
| MS.gene90228.t1 | AT5G38590 | 28.148 | 270 | 152 | 9 | 18 | 283 | 2 | 233 | 8.24e-12 | 66.2 |
| MS.gene90228.t1 | AT5G22610 | 27.100 | 369 | 223 | 13 | 18 | 355 | 18 | 371 | 9.11e-12 | 67.4 |
| MS.gene90228.t1 | AT2G29910 | 27.405 | 343 | 201 | 13 | 18 | 328 | 5 | 331 | 9.18e-12 | 66.6 |
| MS.gene90228.t1 | AT2G29910 | 27.405 | 343 | 201 | 13 | 18 | 328 | 5 | 331 | 9.18e-12 | 66.6 |
| MS.gene90228.t1 | AT2G29910 | 27.405 | 343 | 201 | 13 | 18 | 328 | 5 | 331 | 9.18e-12 | 66.6 |
| MS.gene90228.t1 | AT2G29910 | 27.405 | 343 | 201 | 13 | 18 | 328 | 5 | 331 | 9.18e-12 | 66.6 |
| MS.gene90228.t1 | AT3G49030 | 28.912 | 294 | 182 | 14 | 18 | 301 | 21 | 297 | 1.16e-11 | 66.6 |
| MS.gene90228.t1 | AT3G44810 | 28.571 | 315 | 177 | 12 | 23 | 308 | 12 | 307 | 1.39e-11 | 66.6 |
| MS.gene90228.t1 | AT3G51530 | 27.548 | 363 | 224 | 14 | 1 | 353 | 14 | 347 | 1.45e-11 | 66.6 |
| MS.gene90228.t1 | AT2G29910 | 27.405 | 343 | 201 | 13 | 18 | 328 | 29 | 355 | 1.64e-11 | 65.9 |
| MS.gene90228.t1 | AT3G26930 | 28.249 | 354 | 185 | 18 | 44 | 372 | 2 | 311 | 1.69e-11 | 66.2 |
| MS.gene90228.t1 | AT5G44950 | 25.067 | 375 | 221 | 17 | 18 | 359 | 4 | 351 | 2.04e-11 | 65.9 |
| MS.gene90228.t1 | AT3G26922 | 29.655 | 290 | 156 | 14 | 18 | 300 | 14 | 262 | 2.40e-11 | 64.7 |
| MS.gene90228.t1 | AT2G29910 | 31.746 | 189 | 119 | 5 | 18 | 205 | 5 | 184 | 2.53e-11 | 65.1 |
| MS.gene90228.t1 | AT2G29910 | 31.746 | 189 | 119 | 5 | 18 | 205 | 5 | 184 | 2.53e-11 | 65.1 |
| MS.gene90228.t1 | AT5G02930 | 26.190 | 378 | 223 | 19 | 5 | 355 | 16 | 364 | 2.65e-11 | 65.9 |
| MS.gene90228.t1 | AT3G59180 | 27.636 | 275 | 164 | 10 | 100 | 354 | 65 | 324 | 6.75e-11 | 64.7 |
| MS.gene90228.t1 | AT3G49040 | 28.097 | 331 | 187 | 15 | 15 | 327 | 14 | 311 | 8.10e-11 | 63.5 |
| MS.gene90228.t1 | AT1G21990 | 25.946 | 370 | 225 | 15 | 18 | 355 | 9 | 361 | 9.01e-11 | 63.9 |
Find 84 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTATCAACTCGTATTCTT+TGG | 0.236454 | 4.2:-19930943 | None:intergenic |
| AGTTTACATATACTCTTAAA+AGG | 0.252196 | 4.2:+19931020 | MS.gene90228:CDS |
| CAGGAACTTCACTTGGAGTT+TGG | 0.267226 | 4.2:+19930525 | MS.gene90228:CDS |
| AATAGCCTTAGCGGCAATAT+AGG | 0.286870 | 4.2:-19930561 | None:intergenic |
| CCTCACTTCTGAAACAATTA+AGG | 0.291254 | 4.2:+19931067 | MS.gene90228:CDS |
| GAAATACCAGAAGTAGTTTC+AGG | 0.302182 | 4.2:+19930360 | MS.gene90228:CDS |
| GATCTTCTTGAATTACTATC+TGG | 0.333607 | 4.2:+19930735 | MS.gene90228:CDS |
| CCCGTCATCACTCGAAGTTT+TGG | 0.336360 | 4.2:+19930902 | MS.gene90228:CDS |
| AGGAACTTCACTTGGAGTTT+GGG | 0.343096 | 4.2:+19930526 | MS.gene90228:CDS |
| TTTATCAACTCGTATTCTTT+GGG | 0.348547 | 4.2:-19930942 | None:intergenic |
| TCAAAATGCTCCTAAGCTTA+AGG | 0.349799 | 4.2:+19931304 | MS.gene90228:CDS |
| TCATGAATTATTGTCTTTGT+CGG | 0.354616 | 4.2:+19931235 | MS.gene90228:CDS |
| CACATTCCAATTGCAATTCT+CGG | 0.360549 | 4.2:-19931267 | None:intergenic |
| CTTCTGGTATTTCAAAGTTA+AGG | 0.382629 | 4.2:-19930350 | None:intergenic |
| GAGAGGTTGAGAGGTGGAGG+TGG | 0.386339 | 4.2:-19932397 | None:intergenic |
| GACGAACCTGAAACTACTTC+TGG | 0.397258 | 4.2:-19930366 | None:intergenic |
| TCTGATAGTGGTTCTCCCAT+TGG | 0.400426 | 4.2:+19930861 | MS.gene90228:CDS |
| AGGTTGAGAGGTGGAGGTGG+AGG | 0.410454 | 4.2:-19932394 | None:intergenic |
| TAGCGATCTCTCAGACGAAT+TGG | 0.410984 | 4.2:+19930233 | MS.gene90228:CDS |
| GAATTATTGTCTTTGTCGGT+TGG | 0.412480 | 4.2:+19931239 | MS.gene90228:CDS |
| ATAGCCTTAGCGGCAATATA+GGG | 0.419309 | 4.2:-19930560 | None:intergenic |
| AAGATCAAGATATGTACAAA+AGG | 0.430063 | 4.2:-19932458 | None:intergenic |
| CGTCTGAGAGATCGCTAAAC+CGG | 0.439027 | 4.2:-19930227 | None:intergenic |
| CAAGTGTTCTATCTAAAAGA+TGG | 0.447127 | 4.2:+19930301 | MS.gene90228:CDS |
| TGCAATTGGAATGTGCTTGT+TGG | 0.447677 | 4.2:+19931275 | MS.gene90228:CDS |
| TTCAAGAATGATTGAAGGGA+TGG | 0.448234 | 4.2:-19932548 | None:intergenic |
| CGTACACTTGTGGGTTTCAA+AGG | 0.450086 | 4.2:+19930485 | MS.gene90228:CDS |
| AAGGGAAAAGAGATATTGAT+AGG | 0.453862 | 4.2:-19930804 | None:intergenic |
| ATTAATTTGCAAGGTTCCAA+TGG | 0.458800 | 4.2:-19930877 | None:intergenic |
| CAAATTTCAAGAATGATTGA+AGG | 0.460572 | 4.2:-19932553 | None:intergenic |
| GAATATCCGAGAATTGCAAT+TGG | 0.461307 | 4.2:+19931261 | MS.gene90228:CDS |
| CTTAGCGGCAATATAGGGTT+AGG | 0.466079 | 4.2:-19930555 | None:intergenic |
| TCTCATCAAACTATCCATTC+CGG | 0.470079 | 4.2:+19932416 | MS.gene90228:CDS |
| ACCATGTGACGTACACTTGT+GGG | 0.473340 | 4.2:+19930476 | MS.gene90228:CDS |
| GGCATTAGATCTCAAGGTAC+AGG | 0.492910 | 4.2:+19930506 | MS.gene90228:CDS |
| AGATCAAGATATGTACAAAA+GGG | 0.492970 | 4.2:-19932457 | None:intergenic |
| TAGATAAATGTTTATTTGAG+AGG | 0.493183 | 4.2:+19932364 | MS.gene90228:intron |
| CAAGGTACAGGAACTTCACT+TGG | 0.494897 | 4.2:+19930518 | MS.gene90228:CDS |
| ATGACAAGATCCTTAAGCTT+AGG | 0.497543 | 4.2:-19931314 | None:intergenic |
| GATGAGAGGTTGAGAGGTGG+AGG | 0.500736 | 4.2:-19932400 | None:intergenic |
| TTAATTTGCAAGGTTCCAAT+GGG | 0.510576 | 4.2:-19930876 | None:intergenic |
| CTTAATTGTTTCAGAAGTGA+GGG | 0.517383 | 4.2:-19931066 | None:intergenic |
| ACAATAATTCATGAAAGGTA+AGG | 0.520337 | 4.2:-19931226 | None:intergenic |
| ATCTGGTTGCCCACGTCTTG+AGG | 0.522358 | 4.2:+19930752 | MS.gene90228:CDS |
| CTACGTCTACATAATTATGA+TGG | 0.530026 | 4.2:+19930447 | MS.gene90228:CDS |
| CCTTAATTGTTTCAGAAGTG+AGG | 0.531772 | 4.2:-19931067 | None:intergenic |
| GATGGGTATTCGATAAGTAT+TGG | 0.532155 | 4.2:-19932530 | None:intergenic |
| TTCAAAGGCATTAGATCTCA+AGG | 0.534537 | 4.2:+19930500 | MS.gene90228:CDS |
| TCCAAAACTTCGAGTGATGA+CGG | 0.542313 | 4.2:-19930903 | None:intergenic |
| TTTGATGAGAGGTTGAGAGG+TGG | 0.543328 | 4.2:-19932403 | None:intergenic |
| TTACTATAAATACTACGATC+CGG | 0.543512 | 4.2:+19932495 | MS.gene90228:CDS |
| TCGGATCTAAATAGCCTTAG+CGG | 0.552381 | 4.2:-19930570 | None:intergenic |
| GAGGAGGAGTTTCTCCGGAA+TGG | 0.553515 | 4.2:-19932430 | None:intergenic |
| ATATGTACAAAAGGGGATTG+AGG | 0.553566 | 4.2:-19932449 | None:intergenic |
| AACCATGTGACGTACACTTG+TGG | 0.556597 | 4.2:+19930475 | MS.gene90228:CDS |
| GGATTGAGGAGGAGTTTCTC+CGG | 0.560464 | 4.2:-19932435 | None:intergenic |
| GAGGTCTAATCTTGTTAACA+AGG | 0.562751 | 4.2:-19930823 | None:intergenic |
| CTAACCCTATATTGCCGCTA+AGG | 0.563447 | 4.2:+19930556 | MS.gene90228:CDS |
| ATATACAGATTTAATTTCTG+TGG | 0.565214 | 4.2:-19930388 | None:intergenic |
| AAGTGTTCTATCTAAAAGAT+GGG | 0.566728 | 4.2:+19930302 | MS.gene90228:CDS |
| ATTTATAGTAAGAATTACAG+AGG | 0.568984 | 4.2:-19932483 | None:intergenic |
| CCAAAACTTCGAGTGATGAC+GGG | 0.570090 | 4.2:-19930902 | None:intergenic |
| TCAAGAATGATTGAAGGGAT+GGG | 0.570293 | 4.2:-19932547 | None:intergenic |
| AAATTTCAAGAATGATTGAA+GGG | 0.571285 | 4.2:-19932552 | None:intergenic |
| TCAAAAGAAGAATCAAGTGT+TGG | 0.573930 | 4.2:-19930636 | None:intergenic |
| TGACGGGACATTAATTTGCA+AGG | 0.576167 | 4.2:-19930886 | None:intergenic |
| GTATTGGCGATGATGTAGTC+CGG | 0.579784 | 4.2:-19932514 | None:intergenic |
| ACCCACAAGTGTACGTCACA+TGG | 0.580936 | 4.2:-19930477 | None:intergenic |
| CAAAGACAATAATTCATGAA+AGG | 0.584106 | 4.2:-19931231 | None:intergenic |
| GTATTTCAAAGTTAAGGTCG+AGG | 0.587697 | 4.2:-19930344 | None:intergenic |
| TGTACAAAAGGGGATTGAGG+AGG | 0.602373 | 4.2:-19932446 | None:intergenic |
| GATCAAGATATGTACAAAAG+GGG | 0.610702 | 4.2:-19932456 | None:intergenic |
| GCTATGATGAAGAGTGTGAC+CGG | 0.614264 | 4.2:+19930208 | MS.gene90228:CDS |
| AGGTCTAATCTTGTTAACAA+GGG | 0.614581 | 4.2:-19930822 | None:intergenic |
| GCTTAAGGATCTTGTCATTG+CGG | 0.614702 | 4.2:+19931319 | MS.gene90228:CDS |
| AAAGTTAAGGTCGAGGATCG+TGG | 0.616608 | 4.2:-19930337 | None:intergenic |
| ATTTAGATCCGAGTCACTCG+TGG | 0.620095 | 4.2:+19930581 | MS.gene90228:CDS |
| AGATGAAGAATCTTTAGCGA+TGG | 0.630349 | 4.2:-19930669 | None:intergenic |
| TAGTTTGATGAGAGGTTGAG+AGG | 0.631617 | 4.2:-19932406 | None:intergenic |
| CTCGTGGTCTTAAAATTGCG+TGG | 0.632473 | 4.2:+19930597 | MS.gene90228:CDS |
| AAAAGAAATTCCTCAAGACG+TGG | 0.635871 | 4.2:-19930762 | None:intergenic |
| GGAATGGATAGTTTGATGAG+AGG | 0.644064 | 4.2:-19932414 | None:intergenic |
| AAAGAAATTCCTCAAGACGT+GGG | 0.667148 | 4.2:-19930761 | None:intergenic |
| AGCCAAGAAACTCAAAACAG+TGG | 0.691660 | 4.2:+19930182 | MS.gene90228:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATAAA+AGG | + | chr4.2:19931548-19931567 | MS.gene90228:intron | 0.0% |
| !! | ATAAACAAAAATTAACATAT+AGG | - | chr4.2:19931157-19931176 | None:intergenic | 10.0% |
| !!! | ATTTTGAATAAAATATCATA+AGG | - | chr4.2:19931821-19931840 | None:intergenic | 10.0% |
| !!! | TTTATGATAAAAAGTATTTA+GGG | + | chr4.2:19931399-19931418 | MS.gene90228:intron | 10.0% |
| !!! | TTTTATGATAAAAAGTATTT+AGG | + | chr4.2:19931398-19931417 | MS.gene90228:intron | 10.0% |
| !! | AAGGTTTGTATTATTAAAAA+TGG | - | chr4.2:19931802-19931821 | None:intergenic | 15.0% |
| !! | AGGTTTGTATTATTAAAAAT+GGG | - | chr4.2:19931801-19931820 | None:intergenic | 15.0% |
| !! | CAAAATTGATAAATGTTTAT+TGG | + | chr4.2:19931835-19931854 | MS.gene90228:intron | 15.0% |
| !! | TTAGTTATTGAAAAATAAGA+AGG | - | chr4.2:19931459-19931478 | None:intergenic | 15.0% |
| !!! | TATACATATTTTTTTTTGGA+AGG | + | chr4.2:19931109-19931128 | MS.gene90228:intron | 15.0% |
| !!! | TTTTGAATATCAAATAAACA+TGG | - | chr4.2:19932295-19932314 | None:intergenic | 15.0% |
| !!! | TTTTTTGACAACATAATATT+TGG | + | chr4.2:19931431-19931450 | MS.gene90228:intron | 15.0% |
| !! | AAATTTCAAGAATGATTGAA+GGG | - | chr4.2:19932555-19932574 | None:intergenic | 20.0% |
| !! | AACATATAGGTAACAAAATA+TGG | - | chr4.2:19931144-19931163 | None:intergenic | 20.0% |
| !! | AAGTTATTAACGTTACAATT+TGG | + | chr4.2:19931912-19931931 | MS.gene90228:intron | 20.0% |
| !! | AAGTTATTAACGTTACAATT+TGG | - | chr4.2:19931931-19931912 | None:intergenic | 20.0% |
| !! | AATTGTAACGTAATAACTTA+TGG | - | chr4.2:19931971-19931990 | None:intergenic | 20.0% |
| !! | AGTTTACATATACTCTTAAA+AGG | + | chr4.2:19931020-19931039 | MS.gene90228:CDS | 20.0% |
| !! | ATTATGTTGTCAAAAAACAT+GGG | - | chr4.2:19931428-19931447 | None:intergenic | 20.0% |
| !! | ATTGTAACGTAATAACTTAT+GGG | - | chr4.2:19931970-19931989 | None:intergenic | 20.0% |
| !! | ATTGTAACGTTAATAACTTA+TGG | + | chr4.2:19932159-19932178 | MS.gene90228:intron | 20.0% |
| !! | ATTGTAACGTTAATAACTTA+TGG | - | chr4.2:19932178-19932159 | None:intergenic | 20.0% |
| !! | ATTTATAGTAAGAATTACAG+AGG | - | chr4.2:19932486-19932505 | None:intergenic | 20.0% |
| !! | CTAAATTCAGTTAATTTCAT+TGG | - | chr4.2:19931713-19931732 | None:intergenic | 20.0% |
| !! | GAAACCAAAAAATAAGTTAA+GGG | + | chr4.2:19932131-19932150 | MS.gene90228:intron | 20.0% |
| !! | GAAACCAAAAAATAAGTTAA+GGG | - | chr4.2:19932150-19932131 | None:intergenic | 20.0% |
| !! | GTAACCAATAAATAACTTAA+GGG | + | chr4.2:19932251-19932270 | MS.gene90228:intron | 20.0% |
| !! | TAAGTTATTACGTTACAATT+TGG | + | chr4.2:19931971-19931990 | MS.gene90228:intron | 20.0% |
| !! | TAGATAAATGTTTATTTGAG+AGG | + | chr4.2:19932364-19932383 | MS.gene90228:intron | 20.0% |
| !! | TATTATGTTGTCAAAAAACA+TGG | - | chr4.2:19931429-19931448 | None:intergenic | 20.0% |
| !! | TGTAACCAATAAATAACTTA+AGG | + | chr4.2:19932250-19932269 | MS.gene90228:intron | 20.0% |
| !! | TTAAGATATTTGTTCCATAT+CGG | - | chr4.2:19931624-19931643 | None:intergenic | 20.0% |
| !! | TTGTAACGTTAATAACTTAT+GGG | + | chr4.2:19932160-19932179 | MS.gene90228:intron | 20.0% |
| !! | TTGTAACGTTAATAACTTAT+GGG | - | chr4.2:19932179-19932160 | None:intergenic | 20.0% |
| !!! | ATACCATACATACAAAATTT+TGG | - | chr4.2:19931578-19931597 | None:intergenic | 20.0% |
| !!! | ATATACAGATTTAATTTCTG+TGG | - | chr4.2:19930391-19930410 | None:intergenic | 20.0% |
| !!! | GTTATTTATTGGTTACATTT+TGG | - | chr4.2:19932247-19932266 | None:intergenic | 20.0% |
| !!! | TATTGGCTTAATTAATGATT+TGG | + | chr4.2:19931852-19931871 | MS.gene90228:intron | 20.0% |
| !!! | TGTATTATTAAAAATGGGTT+TGG | - | chr4.2:19931796-19931815 | None:intergenic | 20.0% |
| !!! | TTTGTGCATCTTTTAATTTA+CGG | - | chr4.2:19931690-19931709 | None:intergenic | 20.0% |
| ! | AAGATCAAGATATGTACAAA+AGG | - | chr4.2:19932461-19932480 | None:intergenic | 25.0% |
| ! | AAGTGTTCTATCTAAAAGAT+GGG | + | chr4.2:19930302-19930321 | MS.gene90228:CDS | 25.0% |
| ! | ACAATAATTCATGAAAGGTA+AGG | - | chr4.2:19931229-19931248 | None:intergenic | 25.0% |
| ! | ACATGGCTTAATTAATGATT+TGG | - | chr4.2:19932278-19932297 | None:intergenic | 25.0% |
| ! | AGATCAAGATATGTACAAAA+GGG | - | chr4.2:19932460-19932479 | None:intergenic | 25.0% |
| ! | CAAAGACAATAATTCATGAA+AGG | - | chr4.2:19931234-19931253 | None:intergenic | 25.0% |
| ! | CAAATTTCAAGAATGATTGA+AGG | - | chr4.2:19932556-19932575 | None:intergenic | 25.0% |
| ! | CCATAAGTTATTAGAGTTAA+GGG | - | chr4.2:19932071-19932090 | None:intergenic | 25.0% |
| ! | CCTTAACTCTAATAACTTAT+GGG | + | chr4.2:19932069-19932088 | MS.gene90228:intron | 25.0% |
| ! | CGAAACCAAAAAATAAGTTA+AGG | + | chr4.2:19932130-19932149 | MS.gene90228:intron | 25.0% |
| ! | CGAAACCAAAAAATAAGTTA+AGG | - | chr4.2:19932149-19932130 | None:intergenic | 25.0% |
| ! | GAAACCAACAAATAAGTTAA+GGG | + | chr4.2:19932100-19932119 | MS.gene90228:intron | 25.0% |
| ! | GAAACCAACAAATAAGTTAA+GGG | - | chr4.2:19932119-19932100 | None:intergenic | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | + | chr4.2:19932191-19932210 | MS.gene90228:intron | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | - | chr4.2:19932210-19932191 | None:intergenic | 25.0% |
| ! | TCATGAATTATTGTCTTTGT+CGG | + | chr4.2:19931235-19931254 | MS.gene90228:CDS | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | + | chr4.2:19932190-19932209 | MS.gene90228:intron | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | - | chr4.2:19932209-19932190 | None:intergenic | 25.0% |
| ! | TTACTATAAATACTACGATC+CGG | + | chr4.2:19932495-19932514 | MS.gene90228:CDS | 25.0% |
| ! | TTCACAAACAAAATTTACCA+CGG | + | chr4.2:19931597-19931616 | MS.gene90228:intron | 25.0% |
| ! | TTTAAACTAGTGTATTTACC+CGG | + | chr4.2:19931505-19931524 | MS.gene90228:intron | 25.0% |
| ! | TTTATCAACTCGTATTCTTT+GGG | - | chr4.2:19930945-19930964 | None:intergenic | 25.0% |
| !! | TGACCAAAATTTTGTATGTA+TGG | + | chr4.2:19931572-19931591 | MS.gene90228:intron | 25.0% |
| !!! | ATCTAAGCTTGATTTTAATG+AGG | + | chr4.2:19930698-19930717 | MS.gene90228:CDS | 25.0% |
| !!! | CTTATTTTTTGGTTTCGTTT+TGG | + | chr4.2:19932002-19932021 | MS.gene90228:intron | 25.0% |
| !!! | CTTATTTTTTGGTTTCGTTT+TGG | - | chr4.2:19932021-19932002 | None:intergenic | 25.0% |
| !!! | GTTATTTGTTGGTTACATTT+TGG | + | chr4.2:19931883-19931902 | MS.gene90228:intron | 25.0% |
| !!! | GTTATTTGTTGGTTACATTT+TGG | - | chr4.2:19931902-19931883 | None:intergenic | 25.0% |
| !!! | TTGTGCATCTTTTAATTTAC+GGG | - | chr4.2:19931689-19931708 | None:intergenic | 25.0% |
| AAGGGAAAAGAGATATTGAT+AGG | - | chr4.2:19930807-19930826 | None:intergenic | 30.0% | |
| AGGTCTAATCTTGTTAACAA+GGG | - | chr4.2:19930825-19930844 | None:intergenic | 30.0% | |
| CAAGTGTTCTATCTAAAAGA+TGG | + | chr4.2:19930301-19930320 | MS.gene90228:CDS | 30.0% | |
| CAGAAAACTTCCAAAAATTG+AGG | - | chr4.2:19930845-19930864 | None:intergenic | 30.0% | |
| CCCATAAGTTATTAGAGTTA+AGG | - | chr4.2:19932072-19932091 | None:intergenic | 30.0% | |
| CCCTTAACTCTAATAACTTA+TGG | + | chr4.2:19932068-19932087 | MS.gene90228:intron | 30.0% | |
| CGAAACCAACAAATAAGTTA+AGG | + | chr4.2:19932099-19932118 | MS.gene90228:intron | 30.0% | |
| CGAAACCAACAAATAAGTTA+AGG | - | chr4.2:19932118-19932099 | None:intergenic | 30.0% | |
| CTACGTCTACATAATTATGA+TGG | + | chr4.2:19930447-19930466 | MS.gene90228:CDS | 30.0% | |
| CTTAATTGTTTCAGAAGTGA+GGG | - | chr4.2:19931069-19931088 | None:intergenic | 30.0% | |
| CTTCTGGTATTTCAAAGTTA+AGG | - | chr4.2:19930353-19930372 | None:intergenic | 30.0% | |
| GATCAAGATATGTACAAAAG+GGG | - | chr4.2:19932459-19932478 | None:intergenic | 30.0% | |
| GATCTTCTTGAATTACTATC+TGG | + | chr4.2:19930735-19930754 | MS.gene90228:CDS | 30.0% | |
| GTTTATCAACTCGTATTCTT+TGG | - | chr4.2:19930946-19930965 | None:intergenic | 30.0% | |
| TCAAAAGAAGAATCAAGTGT+TGG | - | chr4.2:19930639-19930658 | None:intergenic | 30.0% | |
| TGGTCCCTTAAGTTATTTAT+TGG | - | chr4.2:19932258-19932277 | None:intergenic | 30.0% | |
| ! | CAAGATTAGACCTCAATTTT+TGG | + | chr4.2:19930832-19930851 | MS.gene90228:CDS | 30.0% |
| !! | AAGCTTGATTTTAATGAGGA+TGG | + | chr4.2:19930702-19930721 | MS.gene90228:CDS | 30.0% |
| !! | ATTAATTTGCAAGGTTCCAA+TGG | - | chr4.2:19930880-19930899 | None:intergenic | 30.0% |
| !! | CTTGAGGAATTTCTTTTTCA+TGG | + | chr4.2:19930768-19930787 | MS.gene90228:CDS | 30.0% |
| !! | TGTTATGCAGTTTTTAAGCA+TGG | + | chr4.2:19931178-19931197 | MS.gene90228:intron | 30.0% |
| !! | TTAATTTGCAAGGTTCCAAT+GGG | - | chr4.2:19930879-19930898 | None:intergenic | 30.0% |
| !! | TTTTGGAAGTTTTCTGATAG+TGG | + | chr4.2:19930849-19930868 | MS.gene90228:CDS | 30.0% |
| !!! | CTTATTTGTTGGTTTCGTTT+TGG | + | chr4.2:19932033-19932052 | MS.gene90228:intron | 30.0% |
| !!! | CTTATTTGTTGGTTTCGTTT+TGG | - | chr4.2:19932052-19932033 | None:intergenic | 30.0% |
| !!! | TGGTCCCTTAACTTATTTTT+TGG | + | chr4.2:19931991-19932010 | MS.gene90228:intron | 30.0% |
| !!! | TGGTCCCTTAACTTATTTTT+TGG | - | chr4.2:19932010-19931991 | None:intergenic | 30.0% |
| AAAAGAAATTCCTCAAGACG+TGG | - | chr4.2:19930765-19930784 | None:intergenic | 35.0% | |
| AAAGAAATTCCTCAAGACGT+GGG | - | chr4.2:19930764-19930783 | None:intergenic | 35.0% | |
| AGATGAAGAATCTTTAGCGA+TGG | - | chr4.2:19930672-19930691 | None:intergenic | 35.0% | |
| ATATGTACAAAAGGGGATTG+AGG | - | chr4.2:19932452-19932471 | None:intergenic | 35.0% | |
| ATGACAAGATCCTTAAGCTT+AGG | - | chr4.2:19931317-19931336 | None:intergenic | 35.0% | |
| CACATTCCAATTGCAATTCT+CGG | - | chr4.2:19931270-19931289 | None:intergenic | 35.0% | |
| CCTTAATTGTTTCAGAAGTG+AGG | - | chr4.2:19931070-19931089 | None:intergenic | 35.0% | |
| GAAATACCAGAAGTAGTTTC+AGG | + | chr4.2:19930360-19930379 | MS.gene90228:CDS | 35.0% | |
| GAATATCCGAGAATTGCAAT+TGG | + | chr4.2:19931261-19931280 | MS.gene90228:CDS | 35.0% | |
| GAATTATTGTCTTTGTCGGT+TGG | + | chr4.2:19931239-19931258 | MS.gene90228:CDS | 35.0% | |
| GAGGTCTAATCTTGTTAACA+AGG | - | chr4.2:19930826-19930845 | None:intergenic | 35.0% | |
| GATGGGTATTCGATAAGTAT+TGG | - | chr4.2:19932533-19932552 | None:intergenic | 35.0% | |
| GTATTTCAAAGTTAAGGTCG+AGG | - | chr4.2:19930347-19930366 | None:intergenic | 35.0% | |
| GTTACTGTAGTGACAAAAAG+AGG | + | chr4.2:19932584-19932603 | MS.gene90228:CDS | 35.0% | |
| TAGAGTTAAGGGAGTAGTTT+GGG | - | chr4.2:19932060-19932079 | None:intergenic | 35.0% | |
| TCAAAATGCTCCTAAGCTTA+AGG | + | chr4.2:19931304-19931323 | MS.gene90228:CDS | 35.0% | |
| TCAAGAATGATTGAAGGGAT+GGG | - | chr4.2:19932550-19932569 | None:intergenic | 35.0% | |
| TCTCATCAAACTATCCATTC+CGG | + | chr4.2:19932416-19932435 | MS.gene90228:CDS | 35.0% | |
| TGGTCCCTTAACTTATTTGT+TGG | + | chr4.2:19932022-19932041 | MS.gene90228:intron | 35.0% | |
| TGGTCCCTTAACTTATTTGT+TGG | - | chr4.2:19932041-19932022 | None:intergenic | 35.0% | |
| TGGTCCCTTAAGTTATTTGT+TGG | + | chr4.2:19931872-19931891 | MS.gene90228:intron | 35.0% | |
| TGGTCCCTTAAGTTATTTGT+TGG | - | chr4.2:19931891-19931872 | None:intergenic | 35.0% | |
| TTAGAGTTAAGGGAGTAGTT+TGG | - | chr4.2:19932061-19932080 | None:intergenic | 35.0% | |
| TTCAAGAATGATTGAAGGGA+TGG | - | chr4.2:19932551-19932570 | None:intergenic | 35.0% | |
| !! | CCTCACTTCTGAAACAATTA+AGG | + | chr4.2:19931067-19931086 | MS.gene90228:CDS | 35.0% |
| !! | TATGCAGTTTTTAAGCATGG+AGG | + | chr4.2:19931181-19931200 | MS.gene90228:intron | 35.0% |
| !! | TTCAAAGGCATTAGATCTCA+AGG | + | chr4.2:19930500-19930519 | MS.gene90228:CDS | 35.0% |
| !!! | ATCTGTATGCTGCTTTTGTT+GGG | - | chr4.2:19930281-19930300 | None:intergenic | 35.0% |
| AAATTTACCACGGACCGATA+TGG | + | chr4.2:19931607-19931626 | MS.gene90228:intron | 40.0% | |
| AGCCAAGAAACTCAAAACAG+TGG | + | chr4.2:19930182-19930201 | MS.gene90228:CDS | 40.0% | |
| AGGAACTTCACTTGGAGTTT+GGG | + | chr4.2:19930526-19930545 | MS.gene90228:CDS | 40.0% | |
| ATATATAACTCGGACAACGC+CGG | - | chr4.2:19931527-19931546 | None:intergenic | 40.0% | |
| GCTTAAGGATCTTGTCATTG+CGG | + | chr4.2:19931319-19931338 | MS.gene90228:CDS | 40.0% | |
| GGAATGGATAGTTTGATGAG+AGG | - | chr4.2:19932417-19932436 | None:intergenic | 40.0% | |
| TAGTTTGATGAGAGGTTGAG+AGG | - | chr4.2:19932409-19932428 | None:intergenic | 40.0% | |
| TCCAAAACTTCGAGTGATGA+CGG | - | chr4.2:19930906-19930925 | None:intergenic | 40.0% | |
| TGCAATTGGAATGTGCTTGT+TGG | + | chr4.2:19931275-19931294 | MS.gene90228:CDS | 40.0% | |
| ! | AATAGCCTTAGCGGCAATAT+AGG | - | chr4.2:19930564-19930583 | None:intergenic | 40.0% |
| ! | ATAGCCTTAGCGGCAATATA+GGG | - | chr4.2:19930563-19930582 | None:intergenic | 40.0% |
| ! | TCGGATCTAAATAGCCTTAG+CGG | - | chr4.2:19930573-19930592 | None:intergenic | 40.0% |
| !! | TGACGGGACATTAATTTGCA+AGG | - | chr4.2:19930889-19930908 | None:intergenic | 40.0% |
| !!! | AGCCACTGTTTTGAGTTTCT+TGG | - | chr4.2:19930187-19930206 | None:intergenic | 40.0% |
| !!! | GATCTGTATGCTGCTTTTGT+TGG | - | chr4.2:19930282-19930301 | None:intergenic | 40.0% |
| !!! | TTTTAAGACCACGAGTGACT+CGG | - | chr4.2:19930592-19930611 | None:intergenic | 40.0% |
| AAAGTTAAGGTCGAGGATCG+TGG | - | chr4.2:19930340-19930359 | None:intergenic | 45.0% | |
| AACCATGTGACGTACACTTG+TGG | + | chr4.2:19930475-19930494 | MS.gene90228:CDS | 45.0% | |
| ACCATGTGACGTACACTTGT+GGG | + | chr4.2:19930476-19930495 | MS.gene90228:CDS | 45.0% | |
| ATTTAGATCCGAGTCACTCG+TGG | + | chr4.2:19930581-19930600 | MS.gene90228:CDS | 45.0% | |
| ATTTGTTCCATATCGGTCCG+TGG | - | chr4.2:19931617-19931636 | None:intergenic | 45.0% | |
| CAAGGTACAGGAACTTCACT+TGG | + | chr4.2:19930518-19930537 | MS.gene90228:CDS | 45.0% | |
| CAGGAACTTCACTTGGAGTT+TGG | + | chr4.2:19930525-19930544 | MS.gene90228:CDS | 45.0% | |
| CCAAAACTTCGAGTGATGAC+GGG | - | chr4.2:19930905-19930924 | None:intergenic | 45.0% | |
| CGTACACTTGTGGGTTTCAA+AGG | + | chr4.2:19930485-19930504 | MS.gene90228:CDS | 45.0% | |
| CTAACCCTATATTGCCGCTA+AGG | + | chr4.2:19930556-19930575 | MS.gene90228:CDS | 45.0% | |
| CTTAGCGGCAATATAGGGTT+AGG | - | chr4.2:19930558-19930577 | None:intergenic | 45.0% | |
| GACGAACCTGAAACTACTTC+TGG | - | chr4.2:19930369-19930388 | None:intergenic | 45.0% | |
| GGCATTAGATCTCAAGGTAC+AGG | + | chr4.2:19930506-19930525 | MS.gene90228:CDS | 45.0% | |
| TAGCGATCTCTCAGACGAAT+TGG | + | chr4.2:19930233-19930252 | MS.gene90228:CDS | 45.0% | |
| TATATAACTCGGACAACGCC+GGG | - | chr4.2:19931526-19931545 | None:intergenic | 45.0% | |
| TGTACAAAAGGGGATTGAGG+AGG | - | chr4.2:19932449-19932468 | None:intergenic | 45.0% | |
| TTTGATGAGAGGTTGAGAGG+TGG | - | chr4.2:19932406-19932425 | None:intergenic | 45.0% | |
| ! | CTCGTGGTCTTAAAATTGCG+TGG | + | chr4.2:19930597-19930616 | MS.gene90228:CDS | 45.0% |
| ! | GCTATGATGAAGAGTGTGAC+CGG | + | chr4.2:19930208-19930227 | MS.gene90228:CDS | 45.0% |
| ! | GGTTTGGAATTCTGCGAGTT+CGG | - | chr4.2:19931780-19931799 | None:intergenic | 45.0% |
| ! | GTATTGGCGATGATGTAGTC+CGG | - | chr4.2:19932517-19932536 | None:intergenic | 45.0% |
| ! | GTTTGGAATTCTGCGAGTTC+GGG | - | chr4.2:19931779-19931798 | None:intergenic | 45.0% |
| !! | TCTGATAGTGGTTCTCCCAT+TGG | + | chr4.2:19930861-19930880 | MS.gene90228:CDS | 45.0% |
| !!! | TGTATGCTGCTTTTGTTGGG+AGG | - | chr4.2:19930278-19930297 | None:intergenic | 45.0% |
| !! | ATATATATATATATATAACT+CGG | - | chr4.2:19931537-19931556 | None:intergenic | 5.0% |
| !!! | TTATTATACATATTTTTTTT+TGG | + | chr4.2:19931105-19931124 | MS.gene90228:intron | 5.0% |
| ACCCACAAGTGTACGTCACA+TGG | - | chr4.2:19930480-19930499 | None:intergenic | 50.0% | |
| CGTCTGAGAGATCGCTAAAC+CGG | - | chr4.2:19930230-19930249 | None:intergenic | 50.0% | |
| GGATTGAGGAGGAGTTTCTC+CGG | - | chr4.2:19932438-19932457 | None:intergenic | 50.0% | |
| ! | CCCGTCATCACTCGAAGTTT+TGG | + | chr4.2:19930902-19930921 | MS.gene90228:CDS | 50.0% |
| ATCTGGTTGCCCACGTCTTG+AGG | + | chr4.2:19930752-19930771 | MS.gene90228:CDS | 55.0% | |
| GAGGAGGAGTTTCTCCGGAA+TGG | - | chr4.2:19932433-19932452 | None:intergenic | 55.0% | |
| GATGAGAGGTTGAGAGGTGG+AGG | - | chr4.2:19932403-19932422 | None:intergenic | 55.0% | |
| AGGTTGAGAGGTGGAGGTGG+AGG | - | chr4.2:19932397-19932416 | None:intergenic | 60.0% | |
| GAGAGGTTGAGAGGTGGAGG+TGG | - | chr4.2:19932400-19932419 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 19930174 | 19932615 | 19930174 | ID=MS.gene90228 |
| chr4.2 | mRNA | 19930174 | 19932615 | 19930174 | ID=MS.gene90228.t1;Parent=MS.gene90228 |
| chr4.2 | exon | 19930174 | 19931088 | 19930174 | ID=MS.gene90228.t1.exon1;Parent=MS.gene90228.t1 |
| chr4.2 | CDS | 19930174 | 19931088 | 19930174 | ID=cds.MS.gene90228.t1;Parent=MS.gene90228.t1 |
| chr4.2 | exon | 19931188 | 19931340 | 19931188 | ID=MS.gene90228.t1.exon2;Parent=MS.gene90228.t1 |
| chr4.2 | CDS | 19931188 | 19931340 | 19931188 | ID=cds.MS.gene90228.t1;Parent=MS.gene90228.t1 |
| chr4.2 | exon | 19932367 | 19932615 | 19932367 | ID=MS.gene90228.t1.exon3;Parent=MS.gene90228.t1 |
| chr4.2 | CDS | 19932367 | 19932615 | 19932367 | ID=cds.MS.gene90228.t1;Parent=MS.gene90228.t1 |
| Gene Sequence |
| Protein sequence |
