AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072231


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072231.t1 MTR_8g445780 58.264 242 84 6 1 241 1 226 3.15e-84 256
MS.gene072231.t1 MTR_8g014260 56.017 241 97 6 1 237 1 236 7.78e-74 231
MS.gene072231.t1 MTR_8g077460 57.269 227 93 4 15 240 8 231 1.40e-73 228
MS.gene072231.t1 MTR_5g021550 64.634 164 54 3 1 162 1 162 1.37e-67 206
MS.gene072231.t1 MTR_8g014290 58.929 168 56 4 1 163 1 160 1.36e-59 186
MS.gene072231.t1 MTR_8g468810 45.528 246 119 7 1 237 1 240 1.41e-56 183
MS.gene072231.t1 MTR_8g468810 45.528 246 119 7 1 237 1 240 1.44e-56 183
MS.gene072231.t1 MTR_8g468810 45.528 246 119 7 1 237 1 240 3.62e-56 183
MS.gene072231.t1 MTR_8g468810 45.528 246 119 7 1 237 1 240 7.78e-56 183
MS.gene072231.t1 MTR_8g468810 45.528 246 119 7 1 237 1 240 8.05e-55 182
MS.gene072231.t1 MTR_8g014160 45.887 231 112 6 13 237 37 260 1.04e-52 176
MS.gene072231.t1 MTR_8g058970 42.969 256 122 7 1 237 1 251 2.79e-52 176
MS.gene072231.t1 MTR_2g083840 43.777 233 125 6 6 237 10 237 7.19e-50 169
MS.gene072231.t1 MTR_8g058965 46.091 243 107 9 10 235 2 237 1.34e-47 163
MS.gene072231.t1 MTR_4g024720 49.444 180 69 5 1 162 1 176 4.21e-45 150
MS.gene072231.t1 MTR_4g050250 43.969 257 114 11 1 235 1 249 1.22e-44 155
MS.gene072231.t1 MTR_8g070950 47.660 235 100 11 1 230 1 217 1.91e-44 155
MS.gene072231.t1 MTR_8g469020 44.255 235 107 9 17 235 7 233 2.27e-44 155
MS.gene072231.t1 MTR_8g062270 43.231 229 117 8 17 239 16 237 3.29e-44 154
MS.gene072231.t1 MTR_8g468840 41.333 225 124 6 16 237 13 232 8.93e-44 153
MS.gene072231.t1 MTR_8g468760 42.489 233 122 9 11 237 2 228 7.65e-43 150
MS.gene072231.t1 MTR_8g467800 42.917 240 116 8 6 237 5 231 9.07e-43 148
MS.gene072231.t1 MTR_8g467800 42.917 240 116 8 6 237 5 231 9.41e-42 148
MS.gene072231.t1 MTR_5g092960 40.417 240 129 9 4 235 2 235 8.32e-41 144
MS.gene072231.t1 MTR_5g092960 40.417 240 129 9 4 235 2 235 3.30e-40 144
MS.gene072231.t1 MTR_4g032730 42.727 220 114 9 1 216 1 212 4.74e-39 141
MS.gene072231.t1 MTR_8g062310 44.828 203 82 11 17 214 25 202 9.38e-36 131
MS.gene072231.t1 MTR_8g467790 42.727 220 106 12 17 228 148 355 6.04e-35 130
MS.gene072231.t1 MTR_8g062010 40.090 222 109 9 10 228 2 202 7.95e-34 126
MS.gene072231.t1 MTR_8g062080 42.667 225 108 12 5 221 7 218 1.33e-32 123
MS.gene072231.t1 MTR_8g014220 36.538 208 75 6 5 208 6 160 1.08e-26 101
MS.gene072231.t1 MTR_2g007500 36.667 210 107 5 5 213 2 186 3.07e-26 104
MS.gene072231.t1 MTR_4g024770 70.312 64 17 2 1 63 8 70 4.16e-24 92.0
MS.gene072231.t1 MTR_8g062300 35.470 234 117 13 2 216 13 231 9.42e-23 96.7
MS.gene072231.t1 MTR_8g014180 70.690 58 17 0 1 58 1 58 1.02e-22 88.2
MS.gene072231.t1 MTR_1g041245 32.653 196 117 5 17 212 11 191 4.26e-21 91.3
MS.gene072231.t1 MTR_8g085430 31.429 210 110 6 17 213 11 199 4.77e-21 90.5
MS.gene072231.t1 MTR_7g032380 34.826 201 108 8 17 213 11 192 8.98e-21 90.1
MS.gene072231.t1 MTR_5g084070 32.589 224 127 8 7 227 3 205 4.88e-20 88.6
MS.gene072231.t1 MTR_2g007450 35.000 220 125 7 6 212 2 216 5.04e-20 88.6
MS.gene072231.t1 MTR_7g115270 32.512 203 120 6 16 213 11 201 5.27e-19 85.5
MS.gene072231.t1 MTR_7g056447 33.500 200 108 6 16 211 8 186 1.42e-18 83.2
MS.gene072231.t1 MTR_2g005990 33.014 209 123 7 14 214 3 202 2.50e-18 83.6
MS.gene072231.t1 MTR_1089s0010 30.396 227 138 8 11 235 2 210 4.18e-18 82.8
MS.gene072231.t1 MTR_3g114200 34.132 167 92 5 1 164 1 152 6.61e-18 78.6
MS.gene072231.t1 MTR_7g026500 32.710 214 123 6 6 212 3 202 8.26e-18 82.0
MS.gene072231.t1 MTR_4g098590 33.498 203 116 6 19 213 1 192 1.35e-17 81.3
MS.gene072231.t1 MTR_4g113810 36.879 141 77 5 100 235 1 134 5.31e-17 76.3
MS.gene072231.t1 MTR_3g107120 34.450 209 109 7 17 212 9 202 7.91e-17 79.3
MS.gene072231.t1 MTR_1g107385 32.710 214 131 6 5 210 20 228 9.11e-17 79.0
MS.gene072231.t1 MTR_5g061680 30.476 210 121 7 9 212 3 193 1.64e-16 77.8
MS.gene072231.t1 MTR_4g056030 32.850 207 114 6 15 214 7 195 1.68e-16 78.6
MS.gene072231.t1 MTR_7g056433 34.158 202 120 5 13 214 8 196 1.75e-16 78.2
MS.gene072231.t1 MTR_3g023630 30.808 198 118 6 17 212 8 188 2.62e-16 77.4
MS.gene072231.t1 MTR_5g080710 29.204 226 134 9 8 227 26 231 3.63e-16 77.4
MS.gene072231.t1 MTR_5g083890 32.524 206 122 6 16 210 5 204 3.96e-16 77.4
MS.gene072231.t1 MTR_5g073420 30.583 206 128 7 9 212 3 195 1.33e-15 75.5
MS.gene072231.t1 MTR_7g098570 30.041 243 128 8 6 231 9 226 1.81e-15 75.5
MS.gene072231.t1 MTR_7g055943 33.493 209 115 9 17 221 40 228 2.03e-15 75.1
MS.gene072231.t1 MTR_1g016310 29.108 213 141 5 3 214 6 209 2.10e-15 74.7
MS.gene072231.t1 MTR_6g022360 33.166 199 100 8 17 212 43 211 3.14e-15 74.7
MS.gene072231.t1 MTR_7g056430 32.673 202 83 6 16 212 8 161 3.17e-15 75.1
MS.gene072231.t1 MTR_8g006910 28.571 217 124 4 6 222 41 226 3.34e-15 74.7
MS.gene072231.t1 MTR_7g056420 32.673 202 83 6 16 212 8 161 3.66e-15 75.1
MS.gene072231.t1 MTR_7g033915 30.693 202 102 8 17 214 11 178 3.66e-15 74.3
MS.gene072231.t1 MTR_3g108560 31.220 205 106 7 15 213 18 193 4.47e-15 73.6
MS.gene072231.t1 MTR_1g016310 29.108 213 141 5 3 214 6 209 5.41e-15 73.9
MS.gene072231.t1 MTR_3g108560 31.220 205 106 7 15 213 18 193 5.91e-15 73.6
MS.gene072231.t1 MTR_2g082800 34.184 196 109 8 5 200 17 192 6.86e-15 73.6
MS.gene072231.t1 MTR_2g082850 29.108 213 143 5 6 216 11 217 7.78e-15 73.2
MS.gene072231.t1 MTR_3g036250 31.980 197 119 6 17 212 5 187 7.84e-15 73.2
MS.gene072231.t1 MTR_7g075820 30.374 214 130 7 15 215 4 211 8.17e-15 73.2
MS.gene072231.t1 MTR_3g018680 30.337 178 101 3 6 183 11 165 8.18e-15 73.6
MS.gene072231.t1 MTR_3g108150 29.648 199 118 6 16 213 12 189 1.05e-14 73.2
MS.gene072231.t1 MTR_4g024745 59.155 71 28 1 168 237 16 86 1.20e-14 72.0
MS.gene072231.t1 MTR_6g011460 32.836 201 111 7 17 212 46 227 1.54e-14 72.8
MS.gene072231.t1 MTR_3g107160 31.731 208 123 7 17 220 10 202 1.55e-14 72.4
MS.gene072231.t1 MTR_7g034115 31.818 198 116 8 17 212 11 191 1.57e-14 72.4
MS.gene072231.t1 MTR_7g033990 32.353 204 114 9 17 214 11 196 1.57e-14 72.8
MS.gene072231.t1 MTR_3g071850 28.986 207 122 7 17 216 24 212 2.10e-14 72.8
MS.gene072231.t1 MTR_1g016340 31.925 213 132 8 6 214 4 207 2.31e-14 72.0
MS.gene072231.t1 MTR_1g016340 31.925 213 132 8 6 214 9 212 2.47e-14 72.0
MS.gene072231.t1 MTR_6g022500 32.683 205 106 8 17 212 101 282 2.52e-14 72.0
MS.gene072231.t1 MTR_2g008310 33.168 202 111 9 17 214 2 183 2.58e-14 72.0
MS.gene072231.t1 MTR_3g082890 30.481 187 113 3 1 187 1 170 2.62e-14 72.0
MS.gene072231.t1 MTR_3g113782 47.619 63 33 0 1 63 1 63 2.82e-14 66.6
MS.gene072231.t1 MTR_2g100590 29.000 200 129 6 17 212 42 232 3.08e-14 72.0
MS.gene072231.t1 MTR_4g092430 41.584 101 48 3 6 103 29 121 3.18e-14 72.0
MS.gene072231.t1 MTR_3g448340 30.667 225 121 9 17 224 6 212 3.28e-14 71.6
MS.gene072231.t1 MTR_5g008920 29.353 201 112 8 19 213 14 190 3.33e-14 71.6
MS.gene072231.t1 MTR_2g100590 29.000 200 129 6 17 212 42 232 3.37e-14 71.6
MS.gene072231.t1 MTR_0492s0020 28.358 201 115 5 16 213 85 259 3.94e-14 71.6
MS.gene072231.t1 MTR_4g092430 41.584 101 48 3 6 103 29 121 4.00e-14 71.6
MS.gene072231.t1 MTR_2g100590 29.000 200 129 6 17 212 42 232 4.10e-14 71.2
MS.gene072231.t1 MTR_0543s0010 28.358 201 115 5 16 213 85 259 4.43e-14 71.2
MS.gene072231.t1 MTR_4g080590 30.172 232 137 9 16 242 22 233 4.69e-14 71.2
MS.gene072231.t1 MTR_3g082890 30.481 187 113 3 1 187 81 250 4.73e-14 71.2
MS.gene072231.t1 MTR_4g080590 30.172 232 137 9 16 242 22 233 4.74e-14 71.2
MS.gene072231.t1 MTR_3g023470 31.447 159 91 4 4 162 2 142 4.80e-14 71.2
MS.gene072231.t1 MTR_7g098510 31.336 217 115 7 6 213 7 198 5.30e-14 70.9
MS.gene072231.t1 MTR_4g051640 38.776 98 52 2 6 103 19 108 5.36e-14 68.2
MS.gene072231.t1 MTR_3g040700 29.442 197 124 5 17 212 43 225 6.47e-14 70.9
MS.gene072231.t1 MTR_5g073370 29.648 199 122 7 17 212 5 188 6.49e-14 70.9
MS.gene072231.t1 MTR_2g036470 29.703 202 126 5 17 216 14 201 7.15e-14 70.5
MS.gene072231.t1 MTR_1g115245 32.597 181 104 8 6 184 17 181 7.48e-14 70.1
MS.gene072231.t1 MTR_1g108820 30.049 203 121 6 11 212 2 184 8.06e-14 70.1
MS.gene072231.t1 MTR_5g008950 27.638 199 118 6 19 214 1 176 8.08e-14 70.5
MS.gene072231.t1 MTR_3g107100 31.683 202 116 8 15 212 9 192 8.76e-14 70.5
MS.gene072231.t1 MTR_3g110010 32.663 199 113 6 16 213 12 190 8.97e-14 70.9
MS.gene072231.t1 MTR_3g109982 32.663 199 113 6 16 213 12 190 9.54e-14 70.9
MS.gene072231.t1 MTR_1g108820 30.049 203 121 6 11 212 2 184 1.31e-13 69.7
MS.gene072231.t1 MTR_7g056287 29.949 197 121 6 16 210 2 183 1.39e-13 69.7
MS.gene072231.t1 MTR_6g088705 38.000 100 56 2 6 105 8 101 1.43e-13 68.2
MS.gene072231.t1 MTR_4g039440 32.161 199 114 6 17 214 34 212 1.49e-13 69.7
MS.gene072231.t1 MTR_3g099830 30.392 204 104 9 17 214 12 183 1.51e-13 69.7
MS.gene072231.t1 MTR_2g082880 32.710 214 121 9 15 224 8 202 1.70e-13 69.7
MS.gene072231.t1 MTR_3g463830 41.489 94 47 1 12 105 58 143 2.05e-13 68.9
MS.gene072231.t1 MTR_4g056040 30.078 256 132 9 10 234 2 241 2.13e-13 69.3
MS.gene072231.t1 MTR_4g080787 29.464 224 130 10 5 214 7 216 2.30e-13 69.3
MS.gene072231.t1 MTR_3g048290 31.500 200 123 8 17 214 23 210 2.36e-13 69.3
MS.gene072231.t1 MTR_7g056277 29.851 201 124 6 12 210 254 439 2.47e-13 69.3
MS.gene072231.t1 MTR_2g008320 31.188 202 119 8 17 214 52 237 2.66e-13 68.9
MS.gene072231.t1 MTR_1g014450 28.293 205 134 6 13 214 12 206 2.85e-13 68.9
MS.gene072231.t1 MTR_5g005690 29.694 229 115 12 12 212 13 223 3.18e-13 68.9
MS.gene072231.t1 MTR_6g040270 31.633 196 115 7 19 212 10 188 3.37e-13 68.6
MS.gene072231.t1 MTR_7g007340 32.195 205 92 8 15 214 11 173 3.80e-13 68.6
MS.gene072231.t1 MTR_5g058100 31.250 208 112 8 17 216 9 193 4.09e-13 68.6
MS.gene072231.t1 MTR_1g492880 43.011 93 45 3 15 106 4 89 4.23e-13 63.9
MS.gene072231.t1 MTR_1g492880 43.011 93 45 3 15 106 4 89 5.13e-13 63.9
MS.gene072231.t1 MTR_2g082860 45.714 70 35 1 16 85 26 92 5.38e-13 64.3
MS.gene072231.t1 MTR_7g007080 27.805 205 128 5 14 213 1 190 5.45e-13 68.2
MS.gene072231.t1 MTR_4g056020 30.806 211 119 8 10 212 2 193 7.15e-13 67.8
MS.gene072231.t1 MTR_5g060570 30.058 173 88 5 1 165 1 148 7.60e-13 66.6
MS.gene072231.t1 MTR_2g091145 29.461 241 147 10 6 236 6 233 8.04e-13 67.8
MS.gene072231.t1 MTR_1g038760 29.004 231 114 9 6 217 4 203 1.06e-12 67.0
MS.gene072231.t1 MTR_1g038760 29.258 229 112 9 8 217 6 203 1.08e-12 67.0
MS.gene072231.t1 MTR_7g056280 32.961 179 109 4 13 190 2 170 1.18e-12 67.4
MS.gene072231.t1 MTR_7g088260 30.500 200 115 8 16 212 90 268 1.27e-12 67.0
MS.gene072231.t1 MTR_1g038710 31.100 209 121 7 14 214 16 209 1.39e-12 67.0
MS.gene072231.t1 MTR_7g098590 51.786 56 27 0 6 61 7 62 1.42e-12 63.5
MS.gene072231.t1 MTR_4g024710 55.882 68 29 1 169 235 63 130 1.42e-12 66.6
MS.gene072231.t1 MTR_5g087940 29.258 229 119 7 5 217 14 215 1.53e-12 66.6
MS.gene072231.t1 MTR_2g100570 28.571 203 130 7 17 214 72 264 1.67e-12 67.0
MS.gene072231.t1 MTR_2g100570 28.571 203 130 7 17 214 72 264 1.77e-12 66.6
MS.gene072231.t1 MTR_2g100570 28.311 219 141 8 1 214 57 264 1.90e-12 66.6
MS.gene072231.t1 MTR_7g034090 36.000 125 77 3 14 137 1 123 2.01e-12 66.6
MS.gene072231.t1 MTR_7g034110 32.000 125 71 2 17 141 11 121 2.14e-12 66.2
MS.gene072231.t1 MTR_2g047858 28.261 230 149 5 9 235 107 323 3.14e-12 65.9
MS.gene072231.t1 MTR_3g105060 27.136 199 125 6 17 213 14 194 3.35e-12 65.5
MS.gene072231.t1 MTR_2g072720 30.519 154 92 3 7 159 29 168 3.78e-12 65.9
MS.gene072231.t1 MTR_3g095640 32.331 133 84 4 3 133 4 132 3.89e-12 63.2
MS.gene072231.t1 MTR_4g080773 27.928 222 136 8 5 214 7 216 3.97e-12 65.9
MS.gene072231.t1 MTR_4g080773 27.928 222 136 8 5 214 7 216 4.95e-12 65.5
MS.gene072231.t1 MTR_2g007550 31.250 160 91 2 5 164 2 142 5.16e-12 65.1
MS.gene072231.t1 MTR_5g045510 28.436 211 130 9 12 219 7 199 5.35e-12 65.1
MS.gene072231.t1 MTR_7g081290 48.438 64 32 1 1 63 1 64 6.20e-12 63.9
MS.gene072231.t1 MTR_7g033945 36.066 122 65 4 17 137 11 120 6.22e-12 62.8
MS.gene072231.t1 MTR_5g045170 29.146 199 117 8 19 212 16 195 6.33e-12 65.1
MS.gene072231.t1 MTR_7g033470 48.052 77 28 3 17 89 14 82 7.14e-12 61.6
MS.gene072231.t1 MTR_3g007830 31.579 171 91 7 3 171 2 148 7.46e-12 64.7
MS.gene072231.t1 MTR_4g093690 31.364 220 117 10 3 210 2 199 7.64e-12 63.9
MS.gene072231.t1 MTR_7g080440 42.857 84 40 2 7 90 5 80 7.82e-12 64.7
MS.gene072231.t1 MTR_4g032845 43.210 81 44 1 16 96 2 80 8.07e-12 64.7
MS.gene072231.t1 MTR_2g007400 30.332 211 125 9 17 216 12 211 8.21e-12 64.7
MS.gene072231.t1 MTR_1g115250 39.496 119 63 4 4 122 21 130 8.30e-12 64.7
MS.gene072231.t1 MTR_4g051460 50.000 58 29 0 16 73 4 61 9.13e-12 59.3
MS.gene072231.t1 MTR_4g092320 50.000 58 29 0 16 73 4 61 9.13e-12 59.3
MS.gene072231.t1 MTR_5g039970 60.870 46 18 0 16 61 18 63 9.69e-12 64.3
MS.gene072231.t1 MTR_4g090940 43.333 90 38 3 6 90 143 224 1.11e-11 64.3
MS.gene072231.t1 MTR_6g088700 37.000 100 57 1 6 105 3 96 1.21e-11 63.9
MS.gene072231.t1 MTR_3g008050 31.765 170 90 7 4 171 3 148 1.34e-11 63.9
MS.gene072231.t1 MTR_3g023270 27.879 165 89 6 7 165 2 142 1.46e-11 63.5
MS.gene072231.t1 MTR_2g007360 47.222 72 33 1 17 88 12 78 1.48e-11 63.9
MS.gene072231.t1 MTR_2g007530 31.429 175 85 5 17 164 19 185 1.55e-11 63.5
MS.gene072231.t1 MTR_5g082930 40.206 97 43 3 19 108 17 105 1.58e-11 62.0
MS.gene072231.t1 MTR_3g026920 31.481 216 106 7 17 214 19 210 1.73e-11 63.5
MS.gene072231.t1 MTR_1g067190 27.329 161 99 3 8 168 6 148 1.95e-11 63.2
MS.gene072231.t1 MTR_5g039950 29.018 224 119 9 6 222 12 202 1.99e-11 63.5
MS.gene072231.t1 MTR_4g045740 38.202 89 47 2 5 93 8 88 2.14e-11 62.0
MS.gene072231.t1 MTR_7g114710 28.713 202 119 8 17 213 13 194 2.30e-11 63.2
MS.gene072231.t1 MTR_2g047872 27.155 232 155 7 5 235 11 229 2.37e-11 63.2
MS.gene072231.t1 MTR_4g051510 27.700 213 107 5 8 181 26 230 2.38e-11 62.8
MS.gene072231.t1 MTR_3g007790 31.677 161 89 6 13 171 21 162 2.58e-11 63.2
MS.gene072231.t1 MTR_7g021630 25.328 229 130 7 1 214 1 203 2.68e-11 62.8
MS.gene072231.t1 MTR_7g021630 25.328 229 130 7 1 214 1 203 2.73e-11 62.8
MS.gene072231.t1 MTR_1g066830 30.348 201 115 7 17 212 8 188 3.57e-11 62.8
MS.gene072231.t1 MTR_2g007100 62.500 40 15 0 17 56 2 41 3.58e-11 58.2
MS.gene072231.t1 MTR_3g467400 37.778 90 46 3 17 104 3 84 3.94e-11 62.4
MS.gene072231.t1 MTR_4g092440 34.653 101 58 2 3 103 18 110 4.76e-11 62.4
MS.gene072231.t1 MTR_3g023330 35.354 99 57 2 6 104 4 95 5.08e-11 62.0
MS.gene072231.t1 MTR_6g006730 26.728 217 139 7 13 215 2 212 5.35e-11 62.4
MS.gene072231.t1 MTR_3g036330 45.783 83 40 2 6 88 2 79 5.38e-11 62.0
MS.gene072231.t1 MTR_1g013840 28.502 207 126 7 8 206 47 239 5.40e-11 62.4
MS.gene072231.t1 MTR_8g465380 31.210 157 96 5 8 164 3 147 6.36e-11 62.0
MS.gene072231.t1 MTR_4g092440 34.653 101 58 2 3 103 18 110 6.50e-11 62.0
MS.gene072231.t1 MTR_4g080813 55.102 49 22 0 17 65 19 67 7.09e-11 57.8
MS.gene072231.t1 MTR_5g065100 30.348 201 117 9 15 212 6 186 7.83e-11 61.6
MS.gene072231.t1 MTR_5g058000 32.227 211 111 10 11 214 2 187 8.06e-11 61.6
MS.gene072231.t1 MTR_7g032370 29.412 187 112 7 29 213 2 170 9.28e-11 61.2
MS.gene072231.t1 MTR_1g090900 32.402 179 98 6 10 185 4 162 9.96e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072231.t1 AT3G59200 35.323 201 115 5 17 214 7 195 5.47e-24 99.0
MS.gene072231.t1 AT3G59200 35.323 201 115 5 17 214 7 195 9.18e-24 99.8
MS.gene072231.t1 AT4G26340 34.513 226 122 9 17 236 2 207 4.17e-20 88.6
MS.gene072231.t1 AT1G69630 34.272 213 113 9 6 212 7 198 5.84e-20 88.6
MS.gene072231.t1 AT4G27050 32.203 236 130 8 14 235 1 220 6.06e-20 88.6
MS.gene072231.t1 AT4G27050 32.203 236 130 8 14 235 1 220 6.06e-20 88.6
MS.gene072231.t1 AT4G27050 32.203 236 130 8 14 235 1 220 6.06e-20 88.6
MS.gene072231.t1 AT4G27050 32.203 236 130 8 14 235 1 220 6.06e-20 88.6
MS.gene072231.t1 AT4G27050 32.203 236 130 8 14 235 1 220 6.06e-20 88.6
MS.gene072231.t1 AT3G42770 34.483 203 118 6 22 219 4 196 6.36e-20 88.6
MS.gene072231.t1 AT4G15060 32.258 217 128 7 2 212 152 355 8.64e-20 88.2
MS.gene072231.t1 AT5G41840 31.163 215 135 5 7 214 4 212 1.49e-19 87.4
MS.gene072231.t1 AT4G15060 32.995 197 118 6 17 212 26 209 2.45e-19 86.7
MS.gene072231.t1 AT1G16930 32.773 238 137 11 1 235 1 218 3.37e-19 86.3
MS.gene072231.t1 AT1G16930 32.773 238 137 11 1 235 1 218 3.37e-19 86.3
MS.gene072231.t1 AT1G16930 32.773 238 137 11 1 235 1 218 3.37e-19 86.3
MS.gene072231.t1 AT4G10400 35.023 217 117 8 17 227 2 200 3.73e-19 85.9
MS.gene072231.t1 AT4G10400 35.023 217 117 8 17 227 2 200 3.73e-19 85.9
MS.gene072231.t1 AT4G10400 35.023 217 117 8 17 227 2 200 3.73e-19 85.9
MS.gene072231.t1 AT1G06630 33.333 225 133 8 17 235 12 225 3.92e-19 84.7
MS.gene072231.t1 AT2G26860 33.624 229 131 8 17 239 2 215 4.84e-19 85.5
MS.gene072231.t1 AT2G26860 33.624 229 131 8 17 239 2 215 4.84e-19 85.5
MS.gene072231.t1 AT1G06630 33.333 225 133 8 17 235 12 225 7.05e-19 84.7
MS.gene072231.t1 AT1G06630 33.333 225 133 8 17 235 12 225 7.05e-19 84.7
MS.gene072231.t1 AT1G06630 33.333 225 133 8 17 235 21 234 8.02e-19 85.1
MS.gene072231.t1 AT1G06630 33.333 225 133 8 17 235 12 225 8.26e-19 85.1
MS.gene072231.t1 AT1G06630 33.333 225 133 8 17 235 12 225 8.26e-19 85.1
MS.gene072231.t1 AT1G06630 33.333 225 133 8 17 235 12 225 8.26e-19 85.1
MS.gene072231.t1 AT1G06630 33.333 225 133 8 17 235 12 225 8.26e-19 85.1
MS.gene072231.t1 AT4G09920 35.025 197 111 6 17 212 2 182 9.67e-19 83.6
MS.gene072231.t1 AT4G09920 35.025 197 111 6 17 212 2 182 9.67e-19 83.6
MS.gene072231.t1 AT4G09920 35.025 197 111 6 17 212 2 182 9.67e-19 83.6
MS.gene072231.t1 AT4G09920 35.025 197 111 6 17 212 2 182 1.28e-18 83.6
MS.gene072231.t1 AT4G09920 35.025 197 111 6 17 212 2 182 1.28e-18 83.6
MS.gene072231.t1 AT5G41630 33.831 201 121 6 17 212 12 205 1.39e-18 84.7
MS.gene072231.t1 AT1G06630 33.333 225 133 8 17 235 12 225 1.53e-18 84.3
MS.gene072231.t1 AT5G56440 34.000 200 113 6 17 214 2 184 2.62e-17 80.9
MS.gene072231.t1 AT3G52680 33.333 204 115 5 14 214 18 203 3.09e-17 80.1
MS.gene072231.t1 AT3G52680 33.333 204 115 5 14 214 18 203 3.33e-17 80.5
MS.gene072231.t1 AT4G14103 34.328 201 115 7 17 214 8 194 4.86e-17 79.7
MS.gene072231.t1 AT4G14103 34.328 201 115 7 17 214 8 194 4.86e-17 79.7
MS.gene072231.t1 AT2G26030 32.836 201 111 9 14 210 1 181 5.22e-17 80.1
MS.gene072231.t1 AT2G26030 32.836 201 111 9 14 210 1 181 5.22e-17 80.1
MS.gene072231.t1 AT2G26030 32.836 201 111 9 14 210 1 181 5.77e-17 79.7
MS.gene072231.t1 AT4G14103 34.328 201 115 7 17 214 8 194 7.39e-17 79.3
MS.gene072231.t1 AT1G55660 31.905 210 128 9 5 212 41 237 1.03e-16 78.6
MS.gene072231.t1 AT3G58930 29.851 201 130 4 17 212 2 196 1.08e-16 79.3
MS.gene072231.t1 AT3G58930 29.851 201 130 4 17 212 2 196 1.08e-16 79.3
MS.gene072231.t1 AT3G58930 29.851 201 130 4 17 212 2 196 1.08e-16 79.3
MS.gene072231.t1 AT4G14096 32.500 200 118 6 17 214 8 192 1.09e-16 79.0
MS.gene072231.t1 AT4G14096 32.500 200 118 6 17 214 8 192 1.09e-16 79.0
MS.gene072231.t1 AT1G55660 32.500 200 116 10 17 212 53 237 1.75e-16 78.6
MS.gene072231.t1 AT1G21990 28.696 230 141 5 12 235 4 216 1.92e-16 78.6
MS.gene072231.t1 AT4G00315 32.828 198 118 10 17 212 2 186 2.12e-16 78.2
MS.gene072231.t1 AT1G78750 29.167 216 131 7 6 214 7 207 3.39e-16 77.8
MS.gene072231.t1 AT1G78750 29.167 216 131 7 6 214 7 207 3.39e-16 77.8
MS.gene072231.t1 AT3G58940 31.707 205 128 6 17 215 2 200 5.95e-16 77.0
MS.gene072231.t1 AT3G58940 31.707 205 128 6 17 215 2 200 5.95e-16 77.0
MS.gene072231.t1 AT2G29910 28.889 225 135 6 17 236 5 209 1.46e-15 75.1
MS.gene072231.t1 AT2G29910 28.889 225 135 6 17 236 5 209 1.46e-15 75.1
MS.gene072231.t1 AT5G22720 30.736 231 132 8 3 224 2 213 1.67e-15 75.5
MS.gene072231.t1 AT3G60040 31.278 227 129 9 17 230 13 225 1.78e-15 75.9
MS.gene072231.t1 AT2G29910 28.889 225 135 6 17 236 5 209 2.06e-15 74.7
MS.gene072231.t1 AT2G29910 28.889 225 135 6 17 236 5 209 2.06e-15 74.7
MS.gene072231.t1 AT2G29910 28.889 225 135 6 17 236 5 209 2.06e-15 74.7
MS.gene072231.t1 AT2G29910 28.889 225 135 6 17 236 5 209 2.06e-15 74.7
MS.gene072231.t1 AT3G60040 31.278 227 129 9 17 230 230 442 2.44e-15 75.5
MS.gene072231.t1 AT2G29910 28.889 225 135 6 17 236 29 233 2.60e-15 74.7
MS.gene072231.t1 AT4G00160 32.338 201 118 7 14 212 13 197 2.66e-15 75.1
MS.gene072231.t1 AT3G60040 31.278 227 129 9 17 230 232 444 2.76e-15 75.1
MS.gene072231.t1 AT3G60040 31.278 227 129 9 17 230 232 444 2.97e-15 75.1
MS.gene072231.t1 AT3G60040 31.278 227 129 9 17 230 233 445 3.03e-15 75.1
MS.gene072231.t1 AT2G04230 31.373 204 124 7 12 212 8 198 3.30e-15 74.7
MS.gene072231.t1 AT3G44090 34.123 211 114 9 9 212 16 208 4.08e-15 74.3
MS.gene072231.t1 AT3G58860 31.343 201 123 8 17 214 7 195 5.50e-15 73.9
MS.gene072231.t1 AT1G48400 33.166 199 117 8 17 212 10 195 5.59e-15 74.3
MS.gene072231.t1 AT1G48400 33.166 199 117 8 17 212 10 195 6.63e-15 73.9
MS.gene072231.t1 AT3G50710 29.204 226 139 9 17 236 2 212 9.59e-15 73.2
MS.gene072231.t1 AT5G27750 30.542 203 124 9 17 214 5 195 1.24e-14 73.2
MS.gene072231.t1 AT5G27750 30.542 203 124 9 17 214 5 195 1.24e-14 72.8
MS.gene072231.t1 AT5G41830 28.079 203 132 5 17 212 13 208 1.53e-14 72.8
MS.gene072231.t1 AT3G44060 33.161 193 114 7 22 212 4 183 2.19e-14 72.4
MS.gene072231.t1 AT4G00320 28.431 204 130 6 17 212 13 208 2.44e-14 72.4
MS.gene072231.t1 AT2G29930 30.000 230 124 9 17 235 12 215 2.67e-14 72.0
MS.gene072231.t1 AT2G29930 30.000 230 124 9 17 235 12 215 2.67e-14 72.0
MS.gene072231.t1 AT3G59190 34.416 154 88 5 16 166 11 154 3.32e-14 71.6
MS.gene072231.t1 AT1G51370 30.846 201 114 7 15 214 17 193 3.83e-14 71.2
MS.gene072231.t1 AT1G58310 33.937 221 106 9 17 214 8 211 4.53e-14 71.6
MS.gene072231.t1 AT3G59230 28.293 205 129 6 16 212 11 205 4.77e-14 71.2
MS.gene072231.t1 AT3G28410 30.198 202 113 8 17 215 28 204 4.89e-14 71.2
MS.gene072231.t1 AT3G59190 34.416 154 88 5 16 166 11 154 5.00e-14 71.2
MS.gene072231.t1 AT1G51370 30.846 201 114 7 15 214 17 193 5.16e-14 71.2
MS.gene072231.t1 AT5G56690 31.313 198 122 7 19 214 4 189 5.95e-14 70.9
MS.gene072231.t1 AT1G51370 30.846 201 114 7 15 214 17 193 6.41e-14 70.9
MS.gene072231.t1 AT5G38392 32.039 206 117 9 17 212 2 194 1.08e-13 68.6
MS.gene072231.t1 AT5G38390 31.980 197 110 6 17 212 2 175 1.18e-13 70.1
MS.gene072231.t1 AT3G59000 32.895 152 93 3 17 165 2 147 1.38e-13 70.1
MS.gene072231.t1 AT3G58900 30.846 201 124 6 17 214 2 190 1.42e-13 69.3
MS.gene072231.t1 AT3G58900 30.846 201 124 6 17 214 2 190 1.42e-13 69.3
MS.gene072231.t1 AT3G58900 30.846 201 124 6 17 214 2 190 1.51e-13 69.3
MS.gene072231.t1 AT3G58900 30.846 201 124 6 17 214 2 190 1.71e-13 69.7
MS.gene072231.t1 AT1G66290 26.540 211 130 8 15 224 27 213 1.99e-13 69.7
MS.gene072231.t1 AT1G26890 30.233 172 98 5 13 184 34 183 2.07e-13 69.3
MS.gene072231.t1 AT1G26890 30.233 172 98 5 13 184 34 183 2.07e-13 69.3
MS.gene072231.t1 AT3G59170 30.901 233 116 11 12 214 2 219 2.10e-13 69.3
MS.gene072231.t1 AT4G13985 29.808 208 115 8 17 212 19 207 2.59e-13 69.3
MS.gene072231.t1 AT1G26890 30.233 172 98 5 13 184 34 183 2.66e-13 68.6
MS.gene072231.t1 AT1G26890 30.233 172 98 5 13 184 34 183 2.66e-13 68.6
MS.gene072231.t1 AT1G05080 33.493 209 114 9 9 212 5 193 3.00e-13 68.9
MS.gene072231.t1 AT1G26890 30.233 172 98 5 13 184 34 183 3.63e-13 68.6
MS.gene072231.t1 AT1G66310 28.571 217 135 8 4 219 6 203 3.75e-13 68.6
MS.gene072231.t1 AT3G58880 32.353 204 118 9 17 214 3 192 4.15e-13 68.6
MS.gene072231.t1 AT5G53840 32.704 159 88 6 8 165 9 149 4.25e-13 68.6
MS.gene072231.t1 AT3G51530 30.698 215 126 5 1 214 14 206 4.70e-13 68.6
MS.gene072231.t1 AT3G58820 32.468 154 93 5 17 166 2 148 5.23e-13 68.2
MS.gene072231.t1 AT5G02700 30.198 202 113 9 17 215 27 203 5.90e-13 68.2
MS.gene072231.t1 AT3G59210 30.047 213 120 9 12 214 2 195 6.10e-13 68.2
MS.gene072231.t1 AT3G59210 30.047 213 120 9 12 214 2 195 6.10e-13 68.2
MS.gene072231.t1 AT3G59210 30.047 213 120 9 12 214 2 195 6.10e-13 68.2
MS.gene072231.t1 AT3G59210 30.047 213 120 9 12 214 2 195 6.10e-13 68.2
MS.gene072231.t1 AT3G59210 30.047 213 120 9 12 214 2 195 6.10e-13 68.2
MS.gene072231.t1 AT1G22000 30.968 155 86 4 16 169 28 162 1.25e-12 67.0
MS.gene072231.t1 AT5G56820 29.224 219 132 6 7 224 5 201 1.27e-12 67.0
MS.gene072231.t1 AT5G56420 30.088 226 130 10 17 235 6 210 1.83e-12 66.6
MS.gene072231.t1 AT5G56420 30.088 226 130 10 17 235 6 210 1.83e-12 66.6
MS.gene072231.t1 AT5G56420 30.088 226 130 10 17 235 6 210 1.83e-12 66.6
MS.gene072231.t1 AT1G32375 26.866 201 124 7 17 212 2 184 1.83e-12 66.6
MS.gene072231.t1 AT1G32375 26.866 201 124 7 17 212 2 184 1.83e-12 66.6
MS.gene072231.t1 AT5G56370 31.500 200 116 7 17 214 2 182 1.94e-12 66.2
MS.gene072231.t1 AT1G78760 26.442 208 126 7 2 202 5 192 2.02e-12 66.6
MS.gene072231.t1 AT3G44810 31.472 197 117 7 22 212 12 196 2.05e-12 66.6
MS.gene072231.t1 AT2G42720 32.039 206 117 10 17 214 2 192 2.32e-12 66.2
MS.gene072231.t1 AT5G38590 29.146 199 118 7 17 212 2 180 2.61e-12 65.5
MS.gene072231.t1 AT5G02930 28.505 214 115 8 17 222 28 211 2.71e-12 66.2
MS.gene072231.t1 AT5G56380 34.135 208 104 12 17 212 2 188 2.74e-12 66.2
MS.gene072231.t1 AT5G56380 34.135 208 104 12 17 212 2 188 2.74e-12 66.2
MS.gene072231.t1 AT5G56370 30.151 199 120 5 17 214 2 182 3.03e-12 65.9
MS.gene072231.t1 AT5G56370 30.151 199 120 5 17 214 2 182 3.03e-12 65.9
MS.gene072231.t1 AT3G58930 28.643 199 101 4 17 212 2 162 3.22e-12 65.9
MS.gene072231.t1 AT3G58930 28.643 199 101 4 17 212 2 162 3.22e-12 65.9
MS.gene072231.t1 AT5G56400 28.372 215 133 7 1 212 16 212 3.57e-12 65.9
MS.gene072231.t1 AT5G38590 29.146 199 118 7 17 212 2 180 4.37e-12 65.5
MS.gene072231.t1 AT3G59000 36.066 122 69 3 17 135 2 117 4.65e-12 65.1
MS.gene072231.t1 AT3G03040 31.034 203 124 7 17 214 2 193 6.50e-12 65.1
MS.gene072231.t1 AT3G49030 27.059 255 137 9 12 236 16 251 7.29e-12 64.7
MS.gene072231.t1 AT3G49040 28.384 229 143 6 16 240 16 227 8.89e-12 64.3
MS.gene072231.t1 AT3G26922 29.500 200 122 7 14 212 11 192 9.69e-12 63.9
MS.gene072231.t1 AT3G26922 29.500 200 122 7 14 212 11 192 9.69e-12 63.9
MS.gene072231.t1 AT3G49030 27.059 255 137 9 12 236 16 251 9.73e-12 64.3
MS.gene072231.t1 AT4G13960 32.022 178 106 6 17 191 2 167 9.91e-12 64.7
MS.gene072231.t1 AT4G13960 32.022 178 106 6 17 191 2 167 9.91e-12 64.7
MS.gene072231.t1 AT1G64540 27.149 221 130 7 19 235 7 200 1.00e-11 64.3
MS.gene072231.t1 AT1G64540 27.149 221 130 7 19 235 7 200 1.00e-11 64.3
MS.gene072231.t1 AT2G42730 29.902 204 124 11 16 212 4 195 1.48e-11 63.9
MS.gene072231.t1 AT5G44950 28.704 216 122 8 14 222 1 191 1.90e-11 63.5
MS.gene072231.t1 AT3G03030 30.769 208 119 8 17 214 2 194 2.00e-11 63.5
MS.gene072231.t1 AT3G44080 32.240 183 98 7 12 184 2 168 2.09e-11 63.5
MS.gene072231.t1 AT3G59240 30.583 206 120 9 16 214 7 196 2.16e-11 63.5
MS.gene072231.t1 AT1G49610 27.273 220 101 8 17 235 26 187 2.50e-11 63.2
MS.gene072231.t1 AT3G03030 30.392 204 125 7 17 214 2 194 3.17e-11 62.8
MS.gene072231.t1 AT5G22610 29.545 220 133 9 1 214 1 204 4.54e-11 62.4
MS.gene072231.t1 AT5G56410 30.622 209 123 9 17 212 2 201 4.68e-11 62.4
MS.gene072231.t1 AT5G03100 27.404 208 122 8 17 222 9 189 4.81e-11 62.0
MS.gene072231.t1 AT5G03100 27.404 208 122 8 17 222 9 189 4.81e-11 62.0
MS.gene072231.t1 AT5G22730 28.643 199 122 6 16 212 27 207 5.24e-11 62.4
MS.gene072231.t1 AT5G22730 28.643 199 122 6 16 212 27 207 5.24e-11 62.4
MS.gene072231.t1 AT5G22610 29.545 220 133 9 1 214 1 204 5.53e-11 62.4
MS.gene072231.t1 AT5G22730 28.643 199 122 6 16 212 27 207 6.21e-11 62.0

Find 71 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATCCCACCTTCCATAAAA+TGG 0.269219 8.1:-83095529 MS.gene072231:CDS
AACTCAACCTCAATCTCTTT+TGG 0.274286 8.1:-83096000 MS.gene072231:CDS
TTCATGGACGACTATCATTA+TGG 0.280442 8.1:-83096214 MS.gene072231:CDS
GCCCGTGGCAACGGCGGATT+TGG 0.290442 8.1:+83096288 None:intergenic
TCTCTCCGTTCTCGATTTCA+TGG 0.363285 8.1:-83096230 MS.gene072231:CDS
CTCGCCGATGGCGACACCTT+TGG 0.372358 8.1:-83096258 MS.gene072231:CDS
TGGAAGTGAAGAGGGATTGA+GGG 0.375798 8.1:+83095948 None:intergenic
GATCAGGCGTATTTATTTCA+AGG 0.388283 8.1:+83095481 None:intergenic
ACGAAAAGCAGAAGAAGAAA+TGG 0.391744 8.1:-83096374 MS.gene072231:CDS
GTGGAAGTGAAGAGGGATTG+AGG 0.393942 8.1:+83095947 None:intergenic
GTCAATATTCAGTTGAAACT+TGG 0.403561 8.1:-83096054 MS.gene072231:CDS
GAATTCAGATCTGTCGTCTT+CGG 0.404336 8.1:+83095976 None:intergenic
AATGGCTGAAAATCATCATT+GGG 0.405278 8.1:-83095511 MS.gene072231:CDS
TCCGTAACCCTCGCGGCATT+AGG 0.407897 8.1:-83096123 MS.gene072231:CDS
AAATGGCTGAAAATCATCAT+TGG 0.416572 8.1:-83095512 MS.gene072231:CDS
TCCTAATGCCGCGAGGGTTA+CGG 0.437506 8.1:+83096122 None:intergenic
TTCCTCAAGGTGGGGTCCAA+TGG 0.449801 8.1:+83096021 None:intergenic
CTGCCCCATCATTGAAACTC+TGG 0.451368 8.1:-83095588 MS.gene072231:CDS
CCTGAGTGAAACGAGGTTAG+TGG 0.456588 8.1:+83095928 None:intergenic
GAGGTTGAGTTCCTCAAGGT+GGG 0.463886 8.1:+83096012 None:intergenic
CAAACTGTGTCCAAGTGATT+CGG 0.476216 8.1:+83095551 None:intergenic
TACCAAATCCGCCGTTGCCA+CGG 0.477090 8.1:-83096290 MS.gene072231:CDS
ACTTGGGTTCGTGCATCCAT+TGG 0.482081 8.1:-83096037 MS.gene072231:CDS
GAGGTTAGTGGAAGTGAAGA+GGG 0.487046 8.1:+83095940 None:intergenic
TGCCGCGAGGGTTACGGAGG+AGG 0.489805 8.1:+83096128 None:intergenic
ACCAAATCCGCCGTTGCCAC+GGG 0.496379 8.1:-83096289 MS.gene072231:CDS
AAGTTTCAACTGAATATTGA+CGG 0.497355 8.1:+83096056 None:intergenic
CGAGGTTAGTGGAAGTGAAG+AGG 0.499901 8.1:+83095939 None:intergenic
GCCACGGAGAAGTGCATTCA+CGG 0.500251 8.1:+83095610 None:intergenic
TCAATATTCAGTTGAAACTT+GGG 0.502271 8.1:-83096053 MS.gene072231:CDS
TTAGTTTAATGTCACTAAAG+AGG 0.502793 8.1:-83095667 MS.gene072231:CDS
AGAAAGACGGCCCGTGGCAA+CGG 0.504803 8.1:+83096279 None:intergenic
GGAAGACACTTCCGCAATGC+GGG 0.514017 8.1:+83095631 None:intergenic
CTTCGGTCCAAAAGAGATTG+AGG 0.522696 8.1:+83095993 None:intergenic
AGATCCAGAGTTTCAATGAT+GGG 0.530462 8.1:+83095584 None:intergenic
ATGTGGTTGAGCACACCGTC+TGG 0.532070 8.1:+83096328 None:intergenic
TTTCAATGATGGGGCAGCCA+CGG 0.547220 8.1:+83095594 None:intergenic
GTGGCAACGGCGGATTTGGT+AGG 0.550763 8.1:+83096292 None:intergenic
CGGGCCGTCTTTCTCGCCGA+TGG 0.554054 8.1:-83096270 MS.gene072231:CDS
AAGATCCAGAGTTTCAATGA+TGG 0.566139 8.1:+83095583 None:intergenic
TAGGTAGAAATGAGAGGATG+TGG 0.572230 8.1:+83096311 None:intergenic
CCACTAACCTCGTTTCACTC+AGG 0.573255 8.1:-83095928 MS.gene072231:intron
GTCGCCATCGGCGAGAAAGA+CGG 0.573877 8.1:+83096266 None:intergenic
GCTGCCAAAGGTGTCGCCAT+CGG 0.574357 8.1:+83096254 None:intergenic
GAGGGTTACGGAGGAGGACG+AGG 0.578228 8.1:+83096134 None:intergenic
TCGGCGAGAAAGACGGCCCG+TGG 0.590317 8.1:+83096273 None:intergenic
AAGACGGCCCGTGGCAACGG+CGG 0.606994 8.1:+83096282 None:intergenic
TCATCTTCCTAATGCCGCGA+GGG 0.608690 8.1:+83096116 None:intergenic
GGTTTCTCGAACAATGGCGG+AGG 0.617124 8.1:-83096407 None:intergenic
TGAGGTTGAGTTCCTCAAGG+TGG 0.617420 8.1:+83096011 None:intergenic
AGGTTGAGTTCCTCAAGGTG+GGG 0.618659 8.1:+83096013 None:intergenic
TGTTTGTTCCTCAGTCTCAG+TGG 0.622421 8.1:-83095728 MS.gene072231:intron
GATCCAGAGTTTCAATGATG+GGG 0.626590 8.1:+83095585 None:intergenic
GATTGAGGTTGAGTTCCTCA+AGG 0.634810 8.1:+83096008 None:intergenic
GAACGGAGAGATGCTGCCAA+AGG 0.635070 8.1:+83096242 None:intergenic
ATCCATTGGACCCCACCTTG+AGG 0.636108 8.1:-83096023 MS.gene072231:CDS
ATGGCTGAAAATCATCATTG+GGG 0.637497 8.1:-83095510 MS.gene072231:CDS
TGGCTGAAAATCATCATTGG+GGG 0.645486 8.1:-83095509 MS.gene072231:CDS
ATATTGACGGAACGTGTCGT+CGG 0.647224 8.1:+83096069 None:intergenic
TCCGTGAATGCACTTCTCCG+TGG 0.648648 8.1:-83095611 MS.gene072231:CDS
GGCTGAAAATCATCATTGGG+GGG 0.650922 8.1:-83095508 MS.gene072231:CDS
ATTTGGTAGGTAGAAATGAG+AGG 0.653577 8.1:+83096305 None:intergenic
GTCGTCCATGAAATCGAGAA+CGG 0.653828 8.1:+83096225 None:intergenic
CTCATCTTCCTAATGCCGCG+AGG 0.665233 8.1:+83096115 None:intergenic
CGTATCAGTAAATTACCAGA+CGG 0.665762 8.1:-83096343 MS.gene072231:CDS
TAATGCCGCGAGGGTTACGG+AGG 0.678182 8.1:+83096125 None:intergenic
CGGAAGACACTTCCGCAATG+CGG 0.683549 8.1:+83095630 None:intergenic
GTTAATCAAAACCCGCATTG+CGG 0.684091 8.1:-83095642 MS.gene072231:CDS
GTCCTCCTCCGTAACCCTCG+CGG 0.690298 8.1:-83096130 MS.gene072231:CDS
TAAAATACCTGAGTGAAACG+AGG 0.705658 8.1:+83095921 None:intergenic
ACACATTCAAAGCTCTACAG+AGG 0.724498 8.1:-83095690 MS.gene072231:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAGTTTCAACTGAATATTGA+CGG + chr8.1:83095834-83095853 None:intergenic 25.0%
! TCAATATTCAGTTGAAACTT+GGG - chr8.1:83095834-83095853 MS.gene072231:intron 25.0%
! TTAGTTTAATGTCACTAAAG+AGG - chr8.1:83096220-83096239 MS.gene072231:CDS 25.0%
AAATGGCTGAAAATCATCAT+TGG - chr8.1:83096375-83096394 MS.gene072231:CDS 30.0%
AATGGCTGAAAATCATCATT+GGG - chr8.1:83096376-83096395 MS.gene072231:CDS 30.0%
GTCAATATTCAGTTGAAACT+TGG - chr8.1:83095833-83095852 MS.gene072231:intron 30.0%
!! ATTTTCAGCCATTTTATGGA+AGG + chr8.1:83096369-83096388 None:intergenic 30.0%
!! GATGATTTTCAGCCATTTTA+TGG + chr8.1:83096373-83096392 None:intergenic 30.0%
AAGATCCAGAGTTTCAATGA+TGG + chr8.1:83096307-83096326 None:intergenic 35.0%
ACGAAAAGCAGAAGAAGAAA+TGG - chr8.1:83095513-83095532 MS.gene072231:CDS 35.0%
AGATCCAGAGTTTCAATGAT+GGG + chr8.1:83096306-83096325 None:intergenic 35.0%
ATGGCTGAAAATCATCATTG+GGG - chr8.1:83096377-83096396 MS.gene072231:CDS 35.0%
ATTTGGTAGGTAGAAATGAG+AGG + chr8.1:83095585-83095604 None:intergenic 35.0%
CAACGAATCAAAAACTTTGC+AGG - chr8.1:83095715-83095734 MS.gene072231:CDS 35.0%
CGTATCAGTAAATTACCAGA+CGG - chr8.1:83095544-83095563 MS.gene072231:CDS 35.0%
TAAAATACCTGAGTGAAACG+AGG + chr8.1:83095969-83095988 None:intergenic 35.0%
TTCATGGACGACTATCATTA+TGG - chr8.1:83095673-83095692 MS.gene072231:CDS 35.0%
! AACTCAACCTCAATCTCTTT+TGG - chr8.1:83095887-83095906 MS.gene072231:intron 35.0%
!! CTTTTGCTTTTGCACTTTCT+TGG + chr8.1:83096089-83096108 None:intergenic 35.0%
!! GCAAAGTTTTTGATTCGTTG+AGG + chr8.1:83095715-83095734 None:intergenic 35.0%
ACACATTCAAAGCTCTACAG+AGG - chr8.1:83096197-83096216 MS.gene072231:CDS 40.0%
CAAACTGTGTCCAAGTGATT+CGG + chr8.1:83096339-83096358 None:intergenic 40.0%
GAATTCAGATCTGTCGTCTT+CGG + chr8.1:83095914-83095933 None:intergenic 40.0%
GATCCAGAGTTTCAATGATG+GGG + chr8.1:83096305-83096324 None:intergenic 40.0%
GTTAATCAAAACCCGCATTG+CGG - chr8.1:83096245-83096264 MS.gene072231:CDS 40.0%
TAGGTAGAAATGAGAGGATG+TGG + chr8.1:83095579-83095598 None:intergenic 40.0%
TGGCTGAAAATCATCATTGG+GGG - chr8.1:83096378-83096397 MS.gene072231:CDS 40.0%
!! TCAGCCATTTTATGGAAGGT+GGG + chr8.1:83096365-83096384 None:intergenic 40.0%
!! TTCAGCCATTTTATGGAAGG+TGG + chr8.1:83096366-83096385 None:intergenic 40.0%
!! TTCTTCTGCTTTTCGTCGTT+TGG + chr8.1:83095509-83095528 None:intergenic 40.0%
!! TTGCTTTTCTCCGAATCACT+TGG - chr8.1:83096326-83096345 MS.gene072231:CDS 40.0%
ACTGAGACTGAGGAACAAAC+AGG + chr8.1:83096160-83096179 None:intergenic 45.0%
ATATTGACGGAACGTGTCGT+CGG + chr8.1:83095821-83095840 None:intergenic 45.0%
CTTCGGTCCAAAAGAGATTG+AGG + chr8.1:83095897-83095916 None:intergenic 45.0%
GAGGTTAGTGGAAGTGAAGA+GGG + chr8.1:83095950-83095969 None:intergenic 45.0%
GATTGAGGTTGAGTTCCTCA+AGG + chr8.1:83095882-83095901 None:intergenic 45.0%
GCATCCCACCTTCCATAAAA+TGG - chr8.1:83096358-83096377 MS.gene072231:CDS 45.0%
GGCTGAAAATCATCATTGGG+GGG - chr8.1:83096379-83096398 MS.gene072231:CDS 45.0%
GTCGTCCATGAAATCGAGAA+CGG + chr8.1:83095665-83095684 None:intergenic 45.0%
TCTCTCCGTTCTCGATTTCA+TGG - chr8.1:83095657-83095676 MS.gene072231:CDS 45.0%
TGGAAGTGAAGAGGGATTGA+GGG + chr8.1:83095942-83095961 None:intergenic 45.0%
TGTTTGTTCCTCAGTCTCAG+TGG - chr8.1:83096159-83096178 MS.gene072231:CDS 45.0%
ACTTGGGTTCGTGCATCCAT+TGG - chr8.1:83095850-83095869 MS.gene072231:intron 50.0%
AGGTTGAGTTCCTCAAGGTG+GGG + chr8.1:83095877-83095896 None:intergenic 50.0%
CCACTAACCTCGTTTCACTC+AGG - chr8.1:83095959-83095978 MS.gene072231:CDS 50.0%
CCTGAGTGAAACGAGGTTAG+TGG + chr8.1:83095962-83095981 None:intergenic 50.0%
CGAGGTTAGTGGAAGTGAAG+AGG + chr8.1:83095951-83095970 None:intergenic 50.0%
CTGCCCCATCATTGAAACTC+TGG - chr8.1:83096299-83096318 MS.gene072231:CDS 50.0%
GAGGTTGAGTTCCTCAAGGT+GGG + chr8.1:83095878-83095897 None:intergenic 50.0%
GTGGAAGTGAAGAGGGATTG+AGG + chr8.1:83095943-83095962 None:intergenic 50.0%
TCATCTTCCTAATGCCGCGA+GGG + chr8.1:83095774-83095793 None:intergenic 50.0%
TGAGGTTGAGTTCCTCAAGG+TGG + chr8.1:83095879-83095898 None:intergenic 50.0%
TTGCTTCACCACTGAGACTG+AGG + chr8.1:83096170-83096189 None:intergenic 50.0%
! TTTCAATGATGGGGCAGCCA+CGG + chr8.1:83096296-83096315 None:intergenic 50.0%
ATCCATTGGACCCCACCTTG+AGG - chr8.1:83095864-83095883 MS.gene072231:intron 55.0%
ATGTGGTTGAGCACACCGTC+TGG + chr8.1:83095562-83095581 None:intergenic 55.0%
CGGAAGACACTTCCGCAATG+CGG + chr8.1:83096260-83096279 None:intergenic 55.0%
CTCATCTTCCTAATGCCGCG+AGG + chr8.1:83095775-83095794 None:intergenic 55.0%
GAACGGAGAGATGCTGCCAA+AGG + chr8.1:83095648-83095667 None:intergenic 55.0%
GGAAGACACTTCCGCAATGC+GGG + chr8.1:83096259-83096278 None:intergenic 55.0%
TACCAAATCCGCCGTTGCCA+CGG - chr8.1:83095597-83095616 MS.gene072231:CDS 55.0%
TCCGTGAATGCACTTCTCCG+TGG - chr8.1:83096276-83096295 MS.gene072231:CDS 55.0%
TCCTAATGCCGCGAGGGTTA+CGG + chr8.1:83095768-83095787 None:intergenic 55.0%
TTCCTCAAGGTGGGGTCCAA+TGG + chr8.1:83095869-83095888 None:intergenic 55.0%
! GCCACGGAGAAGTGCATTCA+CGG + chr8.1:83096280-83096299 None:intergenic 55.0%
ACCAAATCCGCCGTTGCCAC+GGG - chr8.1:83095598-83095617 MS.gene072231:CDS 60.0%
AGAAAGACGGCCCGTGGCAA+CGG + chr8.1:83095611-83095630 None:intergenic 60.0%
GTCGCCATCGGCGAGAAAGA+CGG + chr8.1:83095624-83095643 None:intergenic 60.0%
TAATGCCGCGAGGGTTACGG+AGG + chr8.1:83095765-83095784 None:intergenic 60.0%
TCCGTAACCCTCGCGGCATT+AGG - chr8.1:83095764-83095783 MS.gene072231:intron 60.0%
! GTGGCAACGGCGGATTTGGT+AGG + chr8.1:83095598-83095617 None:intergenic 60.0%
!! GCTGCCAAAGGTGTCGCCAT+CGG + chr8.1:83095636-83095655 None:intergenic 60.0%
CTCGCCGATGGCGACACCTT+TGG - chr8.1:83095629-83095648 MS.gene072231:CDS 65.0%
GAGGGTTACGGAGGAGGACG+AGG + chr8.1:83095756-83095775 None:intergenic 65.0%
GTCCTCCTCCGTAACCCTCG+CGG - chr8.1:83095757-83095776 MS.gene072231:intron 65.0%
AAGACGGCCCGTGGCAACGG+CGG + chr8.1:83095608-83095627 None:intergenic 70.0%
CGGGCCGTCTTTCTCGCCGA+TGG - chr8.1:83095617-83095636 MS.gene072231:CDS 70.0%
TCGGCGAGAAAGACGGCCCG+TGG + chr8.1:83095617-83095636 None:intergenic 70.0%
TGCCGCGAGGGTTACGGAGG+AGG + chr8.1:83095762-83095781 None:intergenic 70.0%
! GCCCGTGGCAACGGCGGATT+TGG + chr8.1:83095602-83095621 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 83095493 83096416 83095493 ID=MS.gene072231
chr8.1 mRNA 83095493 83096416 83095493 ID=MS.gene072231.t1;Parent=MS.gene072231
chr8.1 exon 83095929 83096416 83095929 ID=MS.gene072231.t1.exon1;Parent=MS.gene072231.t1
chr8.1 CDS 83095929 83096416 83095929 ID=cds.MS.gene072231.t1;Parent=MS.gene072231.t1
chr8.1 exon 83095493 83095736 83095493 ID=MS.gene072231.t1.exon2;Parent=MS.gene072231.t1
chr8.1 CDS 83095493 83095736 83095493 ID=cds.MS.gene072231.t1;Parent=MS.gene072231.t1
Gene Sequence

>MS.gene072231

ATGGCGGAGGAGACCAAACGACGAAAAGCAGAAGAAGAAATGGAAGAAGATCGTATCAGTAAATTACCAGACGGTGTGCTCAACCACATCCTCTCATTTCTACCTACCAAATCCGCCGTTGCCACGGGCCGTCTTTCTCGCCGATGGCGACACCTTTGGCAGCATCTCTCCGTTCTCGATTTCATGGACGACTATCATTATGGATACAACATCAATGAACCTCAACGAATCAAAAACTTTGCAGGTTTTGTTAACAGCGTCCTCGTCCTCCTCCGTAACCCTCGCGGCATTAGGAAGATGAGTCTCGAGTGTGATTACACTCTTTCCGACGACACGTTCCGTCAATATTCAGTTGAAACTTGGGTTCGTGCATCCATTGGACCCCACCTTGAGGAACTCAACCTCAATCTCTTTTGGACCGAAGACGACAGATCTGAATTCAAGCTCCCTCAATCCCTCTTCACTTCCACTAACCTCGTTTCACTCAGGTATTTTAATTCTTTCTATGTCAACTACATGAAAATTAAAATGAATATTGCACATACTTTAAAGAACATTTTCAACATTGAACAAATTTTTAAGAGTAAAATAAACCAAGAAAGTGCAAAAGCAAAAGCGATACATTTGATATTTTGCTTTCTGAATTGTGTGTGATATTACACTACCTGTTTGTTCCTCAGTCTCAGTGGTGAAGCAATTCATGTACACATTCAAAGCTCTACAGAGGTTAGTTTAATGTCACTAAAGAGGATGTTAATCAAAACCCGCATTGCGGAAGTGTCTTCCGTGAATGCACTTCTCCGTGGCTGCCCCATCATTGAAACTCTGGATCTTTGCTTTTCTCCGAATCACTTGGACACAGTTTGCATCCCACCTTCCATAAAATGGCTGAAAATCATCATTGGGGGGCTTACCTTGAAATAA

Protein sequence

>MS.gene072231.t1

MAEETKRRKAEEEMEEDRISKLPDGVLNHILSFLPTKSAVATGRLSRRWRHLWQHLSVLDFMDDYHYGYNINEPQRIKNFAGFVNSVLVLLRNPRGIRKMSLECDYTLSDDTFRQYSVETWVRASIGPHLEELNLNLFWTEDDRSEFKLPQSLFTSTNLVSLSLSGEAIHVHIQSSTEVSLMSLKRMLIKTRIAEVSSVNALLRGCPIIETLDLCFSPNHLDTVCIPPSIKWLKIIIGGLTLK