Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60522.t1 | KEH43359.1 | 70.2 | 346 | 101 | 1 | 6 | 351 | 14 | 357 | 2.50E-130 | 475.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60522.t1 | Q8L7H1 | 28.6 | 364 | 223 | 11 | 10 | 351 | 7 | 355 | 6.5e-23 | 109.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60522.t1 | A0A072VN11 | 70.2 | 346 | 101 | 1 | 6 | 351 | 14 | 357 | 1.8e-130 | 475.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60522.t1 | MTR_1g090883 | 70.000 | 350 | 101 | 2 | 2 | 351 | 12 | 357 | 2.68e-169 | 476 |
MS.gene60522.t1 | MTR_4g056020 | 64.857 | 350 | 119 | 3 | 1 | 350 | 1 | 346 | 1.04e-148 | 427 |
MS.gene60522.t1 | MTR_4g056040 | 61.680 | 381 | 112 | 4 | 1 | 351 | 1 | 377 | 1.02e-147 | 427 |
MS.gene60522.t1 | MTR_4g056030 | 62.571 | 350 | 127 | 3 | 1 | 350 | 1 | 346 | 3.31e-141 | 409 |
MS.gene60522.t1 | MTR_1g038710 | 64.407 | 354 | 116 | 5 | 1 | 348 | 11 | 360 | 6.57e-141 | 407 |
MS.gene60522.t1 | MTR_4g056070 | 58.568 | 391 | 118 | 5 | 1 | 351 | 1 | 387 | 1.95e-138 | 400 |
MS.gene60522.t1 | MTR_4g055990 | 58.398 | 387 | 120 | 5 | 1 | 350 | 1 | 383 | 3.97e-135 | 394 |
MS.gene60522.t1 | MTR_4g055990 | 58.398 | 387 | 120 | 5 | 1 | 350 | 1 | 383 | 6.75e-135 | 394 |
MS.gene60522.t1 | MTR_4g055580 | 58.656 | 387 | 118 | 5 | 1 | 350 | 92 | 473 | 4.63e-131 | 387 |
MS.gene60522.t1 | MTR_1g090900 | 94.944 | 178 | 9 | 0 | 1 | 178 | 1 | 178 | 1.00e-117 | 339 |
MS.gene60522.t1 | MTR_4g093690 | 56.159 | 276 | 108 | 9 | 1 | 272 | 10 | 276 | 3.78e-82 | 251 |
MS.gene60522.t1 | MTR_7g110920 | 53.755 | 253 | 78 | 3 | 101 | 351 | 1 | 216 | 1.01e-75 | 236 |
MS.gene60522.t1 | MTR_4g056010 | 68.817 | 93 | 28 | 1 | 75 | 167 | 6 | 97 | 5.21e-33 | 119 |
MS.gene60522.t1 | MTR_4g056020 | 80.000 | 50 | 10 | 0 | 301 | 350 | 1 | 50 | 1.63e-19 | 84.7 |
MS.gene60522.t1 | MTR_4g080590 | 29.067 | 375 | 212 | 14 | 10 | 359 | 22 | 367 | 7.44e-19 | 87.4 |
MS.gene60522.t1 | MTR_4g080590 | 29.301 | 372 | 210 | 14 | 10 | 356 | 22 | 365 | 1.06e-18 | 87.4 |
MS.gene60522.t1 | MTR_5g039950 | 28.333 | 360 | 194 | 13 | 6 | 350 | 18 | 328 | 1.72e-18 | 86.7 |
MS.gene60522.t1 | MTR_8g445780 | 29.396 | 364 | 208 | 12 | 9 | 351 | 11 | 346 | 4.13e-18 | 85.1 |
MS.gene60522.t1 | MTR_6g011460 | 28.011 | 357 | 170 | 15 | 11 | 353 | 46 | 329 | 7.50e-17 | 81.6 |
MS.gene60522.t1 | MTR_7g033945 | 34.444 | 180 | 97 | 5 | 1 | 167 | 1 | 172 | 2.76e-16 | 76.3 |
MS.gene60522.t1 | MTR_8g467800 | 30.294 | 340 | 205 | 13 | 5 | 332 | 14 | 333 | 4.90e-16 | 78.6 |
MS.gene60522.t1 | MTR_7g034115 | 33.649 | 211 | 127 | 6 | 11 | 217 | 11 | 212 | 8.51e-16 | 78.2 |
MS.gene60522.t1 | MTR_8g467800 | 30.056 | 356 | 221 | 13 | 5 | 348 | 14 | 353 | 9.21e-16 | 78.6 |
MS.gene60522.t1 | MTR_1g041245 | 34.392 | 189 | 111 | 4 | 11 | 195 | 11 | 190 | 1.05e-15 | 78.2 |
MS.gene60522.t1 | MTR_5g084070 | 30.909 | 330 | 186 | 15 | 5 | 322 | 7 | 306 | 1.41e-15 | 77.8 |
MS.gene60522.t1 | MTR_4g032730 | 29.773 | 309 | 177 | 12 | 11 | 298 | 15 | 304 | 3.47e-15 | 77.0 |
MS.gene60522.t1 | MTR_8g468840 | 27.760 | 317 | 201 | 11 | 10 | 309 | 13 | 318 | 5.04e-15 | 76.3 |
MS.gene60522.t1 | MTR_8g062270 | 28.691 | 359 | 217 | 12 | 11 | 348 | 16 | 356 | 6.59e-15 | 75.9 |
MS.gene60522.t1 | MTR_7g007080 | 34.498 | 229 | 117 | 12 | 9 | 221 | 2 | 213 | 1.03e-14 | 75.1 |
MS.gene60522.t1 | MTR_4g039440 | 26.211 | 351 | 187 | 15 | 11 | 353 | 34 | 320 | 1.94e-14 | 74.3 |
MS.gene60522.t1 | MTR_8g014260 | 28.726 | 369 | 217 | 16 | 8 | 351 | 13 | 360 | 2.97e-14 | 73.9 |
MS.gene60522.t1 | MTR_7g033915 | 35.294 | 153 | 87 | 3 | 1 | 143 | 1 | 151 | 6.57e-14 | 72.4 |
MS.gene60522.t1 | MTR_8g468810 | 29.470 | 302 | 184 | 14 | 6 | 292 | 20 | 307 | 1.02e-13 | 71.6 |
MS.gene60522.t1 | MTR_2g005990 | 30.660 | 212 | 108 | 5 | 11 | 198 | 6 | 202 | 1.04e-13 | 72.0 |
MS.gene60522.t1 | MTR_8g468810 | 28.846 | 364 | 224 | 17 | 6 | 350 | 20 | 367 | 1.30e-13 | 71.6 |
MS.gene60522.t1 | MTR_8g468810 | 29.470 | 302 | 184 | 14 | 6 | 292 | 20 | 307 | 1.34e-13 | 71.2 |
MS.gene60522.t1 | MTR_7g055943 | 25.281 | 356 | 182 | 12 | 11 | 352 | 40 | 325 | 1.75e-13 | 71.6 |
MS.gene60522.t1 | MTR_8g468810 | 29.470 | 302 | 184 | 14 | 6 | 292 | 20 | 307 | 1.83e-13 | 71.2 |
MS.gene60522.t1 | MTR_1g053025 | 31.915 | 235 | 128 | 11 | 11 | 222 | 2 | 227 | 2.17e-13 | 71.2 |
MS.gene60522.t1 | MTR_8g468810 | 28.846 | 364 | 224 | 17 | 6 | 350 | 20 | 367 | 2.23e-13 | 71.2 |
MS.gene60522.t1 | MTR_2g007500 | 31.799 | 239 | 122 | 8 | 11 | 229 | 14 | 231 | 2.84e-13 | 70.5 |
MS.gene60522.t1 | MTR_5g080710 | 29.573 | 328 | 188 | 14 | 7 | 313 | 29 | 334 | 3.32e-13 | 70.9 |
MS.gene60522.t1 | MTR_3g048290 | 25.886 | 367 | 237 | 11 | 7 | 350 | 19 | 373 | 3.49e-13 | 70.9 |
MS.gene60522.t1 | MTR_7g039630 | 27.763 | 371 | 192 | 13 | 6 | 350 | 18 | 338 | 6.17e-13 | 69.3 |
MS.gene60522.t1 | MTR_3g108560 | 29.261 | 352 | 177 | 13 | 8 | 355 | 17 | 300 | 6.62e-13 | 69.7 |
MS.gene60522.t1 | MTR_7g115270 | 31.980 | 197 | 115 | 7 | 10 | 195 | 11 | 199 | 9.21e-13 | 69.3 |
MS.gene60522.t1 | MTR_3g108560 | 29.226 | 349 | 175 | 13 | 8 | 352 | 17 | 297 | 1.14e-12 | 68.6 |
MS.gene60522.t1 | MTR_1g085120 | 32.500 | 200 | 103 | 8 | 11 | 196 | 179 | 360 | 1.80e-12 | 68.6 |
MS.gene60522.t1 | MTR_7g056447 | 34.518 | 197 | 114 | 6 | 6 | 198 | 4 | 189 | 2.20e-12 | 67.4 |
MS.gene60522.t1 | MTR_4g081030 | 28.947 | 342 | 200 | 14 | 4 | 327 | 10 | 326 | 2.43e-12 | 67.8 |
MS.gene60522.t1 | MTR_8g468760 | 29.268 | 287 | 167 | 11 | 5 | 271 | 3 | 273 | 2.67e-12 | 67.8 |
MS.gene60522.t1 | MTR_1g085120 | 32.500 | 200 | 103 | 8 | 11 | 196 | 92 | 273 | 3.06e-12 | 67.8 |
MS.gene60522.t1 | MTR_1g085120 | 32.500 | 200 | 103 | 8 | 11 | 196 | 167 | 348 | 3.31e-12 | 67.8 |
MS.gene60522.t1 | MTR_3g107100 | 27.348 | 362 | 186 | 16 | 1 | 352 | 1 | 295 | 3.55e-12 | 67.4 |
MS.gene60522.t1 | MTR_7g098570 | 31.356 | 236 | 140 | 9 | 11 | 235 | 20 | 244 | 3.78e-12 | 67.8 |
MS.gene60522.t1 | MTR_8g070950 | 33.491 | 212 | 120 | 6 | 8 | 208 | 12 | 213 | 4.02e-12 | 67.4 |
MS.gene60522.t1 | MTR_6g022360 | 28.947 | 228 | 117 | 8 | 11 | 219 | 43 | 244 | 4.18e-12 | 67.4 |
MS.gene60522.t1 | MTR_7g032380 | 31.737 | 167 | 104 | 3 | 11 | 172 | 11 | 172 | 5.53e-12 | 66.6 |
MS.gene60522.t1 | MTR_3g023630 | 29.151 | 271 | 151 | 8 | 11 | 264 | 8 | 254 | 8.22e-12 | 66.2 |
MS.gene60522.t1 | MTR_5g005690 | 27.189 | 217 | 146 | 4 | 7 | 219 | 17 | 225 | 1.94e-11 | 65.5 |
MS.gene60522.t1 | MTR_2g083840 | 26.821 | 302 | 189 | 10 | 11 | 294 | 21 | 308 | 1.95e-11 | 65.5 |
MS.gene60522.t1 | MTR_3g099900 | 25.872 | 344 | 201 | 12 | 8 | 325 | 15 | 330 | 2.98e-11 | 64.7 |
MS.gene60522.t1 | MTR_4g080773 | 27.568 | 370 | 225 | 15 | 11 | 350 | 19 | 375 | 3.93e-11 | 64.7 |
MS.gene60522.t1 | MTR_7g056287 | 25.926 | 351 | 177 | 14 | 11 | 351 | 3 | 280 | 4.53e-11 | 63.9 |
MS.gene60522.t1 | MTR_4g024680 | 33.166 | 199 | 96 | 10 | 7 | 200 | 518 | 684 | 4.53e-11 | 64.7 |
MS.gene60522.t1 | MTR_4g080773 | 27.568 | 370 | 225 | 15 | 11 | 350 | 19 | 375 | 4.75e-11 | 64.3 |
MS.gene60522.t1 | MTR_6g022500 | 31.579 | 228 | 122 | 9 | 11 | 219 | 101 | 313 | 5.13e-11 | 64.3 |
MS.gene60522.t1 | MTR_4g045680 | 26.935 | 323 | 192 | 13 | 8 | 308 | 13 | 313 | 5.88e-11 | 63.5 |
MS.gene60522.t1 | MTR_7g023310 | 24.762 | 210 | 144 | 6 | 6 | 211 | 21 | 220 | 6.07e-11 | 63.9 |
MS.gene60522.t1 | MTR_7g017280 | 25.656 | 343 | 219 | 13 | 8 | 324 | 145 | 477 | 6.74e-11 | 63.9 |
MS.gene60522.t1 | MTR_7g098510 | 29.832 | 238 | 133 | 10 | 11 | 231 | 18 | 238 | 7.54e-11 | 63.5 |
MS.gene60522.t1 | MTR_7g033940 | 34.646 | 127 | 75 | 3 | 13 | 134 | 96 | 219 | 7.84e-11 | 61.6 |
MS.gene60522.t1 | MTR_8g085430 | 29.775 | 178 | 108 | 4 | 11 | 176 | 11 | 183 | 7.85e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60522.t1 | AT4G10400 | 33.048 | 351 | 188 | 16 | 11 | 350 | 2 | 316 | 3.45e-28 | 114 |
MS.gene60522.t1 | AT4G10400 | 33.048 | 351 | 188 | 16 | 11 | 350 | 2 | 316 | 3.45e-28 | 114 |
MS.gene60522.t1 | AT4G10400 | 33.048 | 351 | 188 | 16 | 11 | 350 | 2 | 316 | 3.45e-28 | 114 |
MS.gene60522.t1 | AT3G59190 | 31.016 | 374 | 212 | 12 | 10 | 351 | 11 | 370 | 4.04e-26 | 108 |
MS.gene60522.t1 | AT3G59190 | 31.016 | 374 | 212 | 12 | 10 | 351 | 11 | 370 | 9.25e-26 | 108 |
MS.gene60522.t1 | AT3G59230 | 28.646 | 384 | 214 | 13 | 10 | 351 | 11 | 376 | 1.95e-25 | 107 |
MS.gene60522.t1 | AT4G14103 | 28.800 | 375 | 223 | 14 | 10 | 357 | 7 | 364 | 5.97e-25 | 104 |
MS.gene60522.t1 | AT4G14103 | 28.800 | 375 | 223 | 14 | 10 | 357 | 7 | 364 | 5.97e-25 | 104 |
MS.gene60522.t1 | AT4G14103 | 29.235 | 366 | 218 | 14 | 10 | 351 | 7 | 355 | 1.24e-24 | 104 |
MS.gene60522.t1 | AT5G56370 | 29.014 | 355 | 212 | 13 | 11 | 358 | 2 | 323 | 5.88e-24 | 102 |
MS.gene60522.t1 | AT5G56370 | 29.014 | 355 | 212 | 13 | 11 | 358 | 2 | 323 | 5.88e-24 | 102 |
MS.gene60522.t1 | AT5G56370 | 29.226 | 349 | 207 | 13 | 11 | 352 | 2 | 317 | 6.28e-24 | 100 |
MS.gene60522.t1 | AT4G00315 | 29.444 | 360 | 211 | 15 | 11 | 348 | 2 | 340 | 8.22e-24 | 102 |
MS.gene60522.t1 | AT4G26340 | 30.172 | 348 | 208 | 14 | 11 | 350 | 2 | 322 | 6.57e-23 | 99.4 |
MS.gene60522.t1 | AT4G09920 | 32.550 | 298 | 176 | 12 | 10 | 299 | 1 | 281 | 1.87e-22 | 96.3 |
MS.gene60522.t1 | AT4G09920 | 32.550 | 298 | 176 | 12 | 10 | 299 | 1 | 281 | 1.87e-22 | 96.3 |
MS.gene60522.t1 | AT4G09920 | 32.550 | 298 | 176 | 12 | 10 | 299 | 1 | 281 | 1.87e-22 | 96.3 |
MS.gene60522.t1 | AT2G42720 | 30.295 | 373 | 211 | 15 | 11 | 356 | 2 | 352 | 2.98e-22 | 97.8 |
MS.gene60522.t1 | AT5G60610 | 29.076 | 368 | 199 | 17 | 11 | 357 | 2 | 328 | 3.05e-22 | 97.1 |
MS.gene60522.t1 | AT5G60610 | 29.076 | 368 | 199 | 17 | 11 | 357 | 2 | 328 | 3.05e-22 | 97.1 |
MS.gene60522.t1 | AT2G26860 | 28.977 | 352 | 215 | 12 | 11 | 350 | 2 | 330 | 8.45e-22 | 96.3 |
MS.gene60522.t1 | AT2G26860 | 28.977 | 352 | 215 | 12 | 11 | 350 | 2 | 330 | 8.45e-22 | 96.3 |
MS.gene60522.t1 | AT4G09920 | 32.542 | 295 | 174 | 12 | 11 | 297 | 2 | 279 | 2.68e-21 | 93.6 |
MS.gene60522.t1 | AT4G09920 | 32.542 | 295 | 174 | 12 | 11 | 297 | 2 | 279 | 2.68e-21 | 93.6 |
MS.gene60522.t1 | AT3G59210 | 27.733 | 375 | 223 | 10 | 7 | 351 | 3 | 359 | 6.00e-21 | 94.4 |
MS.gene60522.t1 | AT3G59210 | 27.733 | 375 | 223 | 10 | 7 | 351 | 3 | 359 | 6.00e-21 | 94.4 |
MS.gene60522.t1 | AT3G59210 | 27.733 | 375 | 223 | 10 | 7 | 351 | 3 | 359 | 6.00e-21 | 94.4 |
MS.gene60522.t1 | AT3G59210 | 27.733 | 375 | 223 | 10 | 7 | 351 | 3 | 359 | 6.00e-21 | 94.4 |
MS.gene60522.t1 | AT3G59210 | 27.733 | 375 | 223 | 10 | 7 | 351 | 3 | 359 | 6.00e-21 | 94.4 |
MS.gene60522.t1 | AT1G55660 | 28.532 | 361 | 213 | 17 | 11 | 348 | 53 | 391 | 6.03e-21 | 94.4 |
MS.gene60522.t1 | AT4G14096 | 28.333 | 360 | 222 | 12 | 10 | 351 | 7 | 348 | 1.28e-20 | 93.2 |
MS.gene60522.t1 | AT4G14096 | 28.333 | 360 | 222 | 12 | 10 | 351 | 7 | 348 | 1.28e-20 | 93.2 |
MS.gene60522.t1 | AT5G56380 | 27.322 | 366 | 222 | 11 | 11 | 352 | 2 | 347 | 2.40e-20 | 92.0 |
MS.gene60522.t1 | AT5G56380 | 27.322 | 366 | 222 | 11 | 11 | 352 | 2 | 347 | 2.40e-20 | 92.0 |
MS.gene60522.t1 | AT5G41830 | 28.534 | 382 | 225 | 15 | 3 | 351 | 7 | 373 | 2.43e-20 | 92.4 |
MS.gene60522.t1 | AT5G41840 | 27.013 | 385 | 224 | 11 | 11 | 351 | 14 | 385 | 5.13e-20 | 91.7 |
MS.gene60522.t1 | AT3G59160 | 25.635 | 394 | 228 | 12 | 10 | 351 | 12 | 392 | 5.92e-20 | 91.3 |
MS.gene60522.t1 | AT1G55660 | 29.245 | 318 | 182 | 14 | 11 | 301 | 53 | 354 | 7.10e-20 | 90.1 |
MS.gene60522.t1 | AT3G59200 | 28.796 | 382 | 209 | 15 | 10 | 351 | 6 | 364 | 1.03e-19 | 89.7 |
MS.gene60522.t1 | AT5G56400 | 28.080 | 349 | 221 | 10 | 11 | 352 | 33 | 358 | 3.75e-19 | 89.0 |
MS.gene60522.t1 | AT3G59200 | 28.906 | 384 | 206 | 15 | 10 | 351 | 6 | 364 | 5.50e-19 | 88.6 |
MS.gene60522.t1 | AT1G78760 | 28.689 | 366 | 213 | 13 | 9 | 351 | 14 | 354 | 1.03e-18 | 87.4 |
MS.gene60522.t1 | AT4G00320 | 26.632 | 383 | 231 | 13 | 3 | 351 | 7 | 373 | 1.22e-18 | 87.4 |
MS.gene60522.t1 | AT5G56420 | 27.671 | 365 | 203 | 13 | 10 | 352 | 5 | 330 | 2.88e-18 | 85.9 |
MS.gene60522.t1 | AT5G56420 | 27.671 | 365 | 203 | 13 | 10 | 352 | 5 | 330 | 2.88e-18 | 85.9 |
MS.gene60522.t1 | AT5G56420 | 27.671 | 365 | 203 | 13 | 10 | 352 | 5 | 330 | 2.88e-18 | 85.9 |
MS.gene60522.t1 | AT3G58860 | 27.424 | 361 | 219 | 11 | 8 | 348 | 4 | 341 | 8.91e-18 | 84.7 |
MS.gene60522.t1 | AT3G59250 | 29.178 | 353 | 199 | 11 | 10 | 351 | 6 | 318 | 9.43e-18 | 84.3 |
MS.gene60522.t1 | AT5G44950 | 27.072 | 362 | 228 | 12 | 10 | 351 | 3 | 348 | 1.13e-17 | 84.3 |
MS.gene60522.t1 | AT1G51370 | 30.645 | 248 | 139 | 8 | 3 | 243 | 11 | 232 | 1.69e-17 | 83.2 |
MS.gene60522.t1 | AT1G58310 | 26.753 | 385 | 225 | 10 | 10 | 351 | 7 | 377 | 1.93e-17 | 84.0 |
MS.gene60522.t1 | AT3G03030 | 24.378 | 402 | 203 | 11 | 11 | 351 | 2 | 363 | 3.17e-17 | 83.2 |
MS.gene60522.t1 | AT1G51370 | 30.645 | 248 | 139 | 8 | 3 | 243 | 11 | 232 | 4.34e-17 | 82.4 |
MS.gene60522.t1 | AT5G56440 | 29.830 | 352 | 208 | 15 | 11 | 352 | 2 | 324 | 4.58e-17 | 82.4 |
MS.gene60522.t1 | AT1G51370 | 30.645 | 248 | 139 | 8 | 3 | 243 | 11 | 232 | 5.74e-17 | 82.0 |
MS.gene60522.t1 | AT3G50710 | 28.329 | 353 | 217 | 13 | 11 | 352 | 2 | 329 | 7.53e-17 | 81.6 |
MS.gene60522.t1 | AT3G58960 | 26.359 | 368 | 225 | 13 | 11 | 350 | 2 | 351 | 8.45e-17 | 82.0 |
MS.gene60522.t1 | AT1G06630 | 28.418 | 373 | 219 | 15 | 10 | 358 | 11 | 359 | 8.52e-17 | 81.6 |
MS.gene60522.t1 | AT1G06630 | 28.418 | 373 | 219 | 15 | 10 | 358 | 11 | 359 | 8.52e-17 | 81.6 |
MS.gene60522.t1 | AT1G06630 | 28.418 | 373 | 219 | 15 | 10 | 358 | 11 | 359 | 8.52e-17 | 81.6 |
MS.gene60522.t1 | AT1G06630 | 28.418 | 373 | 219 | 15 | 10 | 358 | 11 | 359 | 8.52e-17 | 81.6 |
MS.gene60522.t1 | AT1G06630 | 28.418 | 373 | 219 | 15 | 10 | 358 | 11 | 359 | 9.76e-17 | 81.6 |
MS.gene60522.t1 | AT1G06630 | 28.418 | 373 | 219 | 15 | 10 | 358 | 20 | 368 | 1.16e-16 | 81.3 |
MS.gene60522.t1 | AT2G42730 | 28.571 | 378 | 216 | 15 | 10 | 356 | 4 | 358 | 1.89e-16 | 80.9 |
MS.gene60522.t1 | AT2G04230 | 26.902 | 368 | 219 | 13 | 4 | 350 | 5 | 343 | 2.31e-16 | 80.5 |
MS.gene60522.t1 | AT5G62970 | 29.091 | 385 | 198 | 20 | 11 | 352 | 2 | 354 | 2.33e-16 | 80.5 |
MS.gene60522.t1 | AT4G22280 | 29.630 | 351 | 218 | 10 | 10 | 351 | 1 | 331 | 3.30e-16 | 79.0 |
MS.gene60522.t1 | AT3G03040 | 25.521 | 384 | 216 | 12 | 11 | 351 | 2 | 358 | 3.46e-16 | 80.1 |
MS.gene60522.t1 | AT5G38590 | 30.435 | 299 | 174 | 14 | 11 | 298 | 2 | 277 | 4.88e-16 | 78.2 |
MS.gene60522.t1 | AT4G22280 | 29.714 | 350 | 217 | 10 | 11 | 351 | 2 | 331 | 5.05e-16 | 79.3 |
MS.gene60522.t1 | AT4G15060 | 26.862 | 376 | 223 | 15 | 8 | 359 | 23 | 370 | 7.81e-16 | 78.6 |
MS.gene60522.t1 | AT5G53840 | 29.167 | 360 | 209 | 15 | 9 | 351 | 16 | 346 | 7.82e-16 | 79.0 |
MS.gene60522.t1 | AT3G49030 | 27.557 | 352 | 218 | 14 | 9 | 350 | 19 | 343 | 8.47e-16 | 78.6 |
MS.gene60522.t1 | AT1G06630 | 28.415 | 366 | 214 | 15 | 10 | 351 | 11 | 352 | 1.47e-15 | 77.4 |
MS.gene60522.t1 | AT1G06630 | 28.415 | 366 | 214 | 15 | 10 | 351 | 11 | 352 | 1.47e-15 | 77.4 |
MS.gene60522.t1 | AT5G38590 | 29.060 | 351 | 205 | 16 | 11 | 350 | 2 | 319 | 1.82e-15 | 77.4 |
MS.gene60522.t1 | AT3G44060 | 28.177 | 362 | 222 | 17 | 16 | 359 | 4 | 345 | 1.83e-15 | 77.8 |
MS.gene60522.t1 | AT1G66310 | 27.493 | 371 | 231 | 13 | 5 | 357 | 13 | 363 | 2.30e-15 | 77.4 |
MS.gene60522.t1 | AT4G00160 | 28.000 | 350 | 218 | 8 | 10 | 350 | 15 | 339 | 4.05e-15 | 76.6 |
MS.gene60522.t1 | AT3G58900 | 26.579 | 380 | 228 | 12 | 11 | 356 | 2 | 364 | 6.14e-15 | 76.3 |
MS.gene60522.t1 | AT2G29930 | 27.424 | 361 | 220 | 12 | 10 | 351 | 11 | 348 | 9.55e-15 | 75.5 |
MS.gene60522.t1 | AT2G29930 | 27.424 | 361 | 220 | 12 | 10 | 351 | 11 | 348 | 9.55e-15 | 75.5 |
MS.gene60522.t1 | AT4G13960 | 27.200 | 375 | 214 | 14 | 11 | 351 | 2 | 351 | 1.08e-14 | 75.5 |
MS.gene60522.t1 | AT4G13960 | 27.200 | 375 | 214 | 14 | 11 | 351 | 2 | 351 | 1.08e-14 | 75.5 |
MS.gene60522.t1 | AT3G59240 | 26.243 | 362 | 232 | 11 | 10 | 351 | 7 | 353 | 1.10e-14 | 75.5 |
MS.gene60522.t1 | AT4G26350 | 24.444 | 360 | 223 | 11 | 11 | 350 | 2 | 332 | 1.14e-14 | 75.1 |
MS.gene60522.t1 | AT3G49150 | 25.138 | 362 | 240 | 11 | 9 | 351 | 14 | 363 | 1.32e-14 | 75.1 |
MS.gene60522.t1 | AT3G58980 | 27.371 | 369 | 223 | 14 | 11 | 351 | 2 | 353 | 1.68e-14 | 75.1 |
MS.gene60522.t1 | AT5G22700 | 27.105 | 380 | 225 | 13 | 1 | 350 | 28 | 385 | 1.76e-14 | 74.7 |
MS.gene60522.t1 | AT3G42770 | 29.870 | 308 | 173 | 12 | 16 | 299 | 4 | 292 | 2.35e-14 | 74.7 |
MS.gene60522.t1 | AT3G26922 | 28.767 | 292 | 185 | 11 | 10 | 295 | 13 | 287 | 2.49e-14 | 73.2 |
MS.gene60522.t1 | AT3G26922 | 28.767 | 292 | 185 | 11 | 10 | 295 | 13 | 287 | 2.49e-14 | 73.2 |
MS.gene60522.t1 | AT4G15060 | 27.707 | 314 | 180 | 13 | 9 | 298 | 170 | 460 | 2.87e-14 | 74.3 |
MS.gene60522.t1 | AT4G10420 | 32.308 | 260 | 130 | 13 | 101 | 348 | 1 | 226 | 3.10e-14 | 73.2 |
MS.gene60522.t1 | AT3G58920 | 26.121 | 379 | 228 | 13 | 11 | 351 | 2 | 366 | 4.18e-14 | 73.6 |
MS.gene60522.t1 | AT5G22700 | 27.397 | 365 | 218 | 12 | 11 | 350 | 6 | 348 | 4.56e-14 | 73.6 |
MS.gene60522.t1 | AT5G22700 | 27.397 | 365 | 218 | 12 | 11 | 350 | 6 | 348 | 4.56e-14 | 73.6 |
MS.gene60522.t1 | AT5G22700 | 27.397 | 365 | 218 | 12 | 11 | 350 | 6 | 348 | 4.56e-14 | 73.6 |
MS.gene60522.t1 | AT5G22700 | 27.397 | 365 | 218 | 12 | 11 | 350 | 6 | 348 | 4.56e-14 | 73.6 |
MS.gene60522.t1 | AT1G66300 | 26.400 | 375 | 220 | 13 | 5 | 350 | 23 | 370 | 6.20e-14 | 73.2 |
MS.gene60522.t1 | AT3G52680 | 27.500 | 360 | 223 | 9 | 10 | 359 | 20 | 351 | 7.23e-14 | 72.4 |
MS.gene60522.t1 | AT5G18770 | 27.577 | 359 | 219 | 12 | 10 | 346 | 23 | 362 | 7.78e-14 | 72.4 |
MS.gene60522.t1 | AT3G03030 | 32.821 | 195 | 90 | 6 | 11 | 166 | 2 | 194 | 8.73e-14 | 72.0 |
MS.gene60522.t1 | AT3G59000 | 25.464 | 377 | 227 | 12 | 11 | 351 | 2 | 360 | 1.16e-13 | 72.4 |
MS.gene60522.t1 | AT5G18780 | 26.111 | 360 | 227 | 12 | 10 | 351 | 10 | 348 | 1.33e-13 | 72.0 |
MS.gene60522.t1 | AT5G18780 | 26.111 | 360 | 227 | 12 | 10 | 351 | 10 | 348 | 1.33e-13 | 72.0 |
MS.gene60522.t1 | AT3G52680 | 27.920 | 351 | 215 | 9 | 10 | 350 | 20 | 342 | 1.34e-13 | 72.0 |
MS.gene60522.t1 | AT4G10410 | 26.727 | 333 | 155 | 11 | 25 | 349 | 1 | 252 | 1.36e-13 | 70.5 |
MS.gene60522.t1 | AT5G18770 | 27.577 | 359 | 219 | 12 | 10 | 346 | 23 | 362 | 1.47e-13 | 72.0 |
MS.gene60522.t1 | AT1G16930 | 27.128 | 376 | 216 | 15 | 5 | 351 | 9 | 355 | 1.57e-13 | 72.0 |
MS.gene60522.t1 | AT1G16930 | 27.128 | 376 | 216 | 15 | 5 | 351 | 9 | 355 | 1.57e-13 | 72.0 |
MS.gene60522.t1 | AT1G16930 | 27.128 | 376 | 216 | 15 | 5 | 351 | 9 | 355 | 1.57e-13 | 72.0 |
MS.gene60522.t1 | AT3G58880 | 26.203 | 374 | 219 | 11 | 11 | 351 | 3 | 352 | 2.17e-13 | 71.6 |
MS.gene60522.t1 | AT5G18780 | 25.905 | 359 | 227 | 12 | 10 | 350 | 10 | 347 | 2.28e-13 | 70.9 |
MS.gene60522.t1 | AT5G18780 | 25.905 | 359 | 227 | 12 | 10 | 350 | 10 | 347 | 2.28e-13 | 70.9 |
MS.gene60522.t1 | AT2G29910 | 26.954 | 371 | 207 | 14 | 10 | 339 | 28 | 375 | 2.74e-13 | 70.9 |
MS.gene60522.t1 | AT2G29910 | 26.954 | 371 | 207 | 14 | 10 | 339 | 4 | 351 | 3.04e-13 | 70.5 |
MS.gene60522.t1 | AT2G29910 | 26.954 | 371 | 207 | 14 | 10 | 339 | 4 | 351 | 3.04e-13 | 70.5 |
MS.gene60522.t1 | AT2G29910 | 26.954 | 371 | 207 | 14 | 10 | 339 | 4 | 351 | 3.04e-13 | 70.5 |
MS.gene60522.t1 | AT2G29910 | 26.954 | 371 | 207 | 14 | 10 | 339 | 4 | 351 | 3.04e-13 | 70.5 |
MS.gene60522.t1 | AT5G50270 | 26.437 | 348 | 235 | 11 | 11 | 352 | 2 | 334 | 3.89e-13 | 70.5 |
MS.gene60522.t1 | AT5G27750 | 25.858 | 379 | 223 | 12 | 11 | 350 | 5 | 364 | 4.30e-13 | 70.1 |
MS.gene60522.t1 | AT5G27750 | 25.789 | 380 | 224 | 12 | 11 | 351 | 5 | 365 | 4.87e-13 | 70.5 |
MS.gene60522.t1 | AT5G56410 | 26.075 | 372 | 213 | 16 | 11 | 348 | 2 | 345 | 5.70e-13 | 70.5 |
MS.gene60522.t1 | AT3G49030 | 27.425 | 299 | 190 | 12 | 9 | 298 | 19 | 299 | 7.05e-13 | 69.7 |
MS.gene60522.t1 | AT3G58930 | 25.320 | 391 | 219 | 10 | 11 | 351 | 2 | 369 | 7.27e-13 | 70.1 |
MS.gene60522.t1 | AT3G58930 | 25.320 | 391 | 219 | 10 | 11 | 351 | 2 | 369 | 7.27e-13 | 70.1 |
MS.gene60522.t1 | AT3G58930 | 25.320 | 391 | 219 | 10 | 11 | 351 | 2 | 369 | 7.27e-13 | 70.1 |
MS.gene60522.t1 | AT5G22610 | 26.954 | 371 | 211 | 15 | 3 | 351 | 10 | 342 | 8.02e-13 | 69.7 |
MS.gene60522.t1 | AT5G56690 | 26.446 | 363 | 227 | 12 | 13 | 356 | 4 | 345 | 1.05e-12 | 69.3 |
MS.gene60522.t1 | AT2G29910 | 27.666 | 347 | 196 | 12 | 10 | 322 | 4 | 329 | 1.09e-12 | 68.6 |
MS.gene60522.t1 | AT2G29910 | 27.666 | 347 | 196 | 12 | 10 | 322 | 4 | 329 | 1.09e-12 | 68.6 |
MS.gene60522.t1 | AT5G15620 | 26.923 | 364 | 220 | 13 | 11 | 351 | 2 | 342 | 1.24e-12 | 68.9 |
MS.gene60522.t1 | AT1G32375 | 25.824 | 364 | 223 | 14 | 11 | 357 | 2 | 335 | 1.84e-12 | 68.6 |
MS.gene60522.t1 | AT1G32375 | 25.824 | 364 | 223 | 14 | 11 | 357 | 2 | 335 | 1.84e-12 | 68.6 |
MS.gene60522.t1 | AT5G53635 | 27.913 | 369 | 212 | 16 | 13 | 354 | 2 | 343 | 2.49e-12 | 68.2 |
MS.gene60522.t1 | AT3G60040 | 26.087 | 391 | 224 | 15 | 4 | 356 | 223 | 586 | 2.57e-12 | 68.6 |
MS.gene60522.t1 | AT3G60040 | 26.087 | 391 | 224 | 15 | 4 | 356 | 225 | 588 | 2.57e-12 | 68.6 |
MS.gene60522.t1 | AT3G59180 | 30.389 | 283 | 159 | 11 | 85 | 348 | 60 | 323 | 2.76e-12 | 68.2 |
MS.gene60522.t1 | AT3G60040 | 26.087 | 391 | 224 | 15 | 4 | 356 | 6 | 369 | 2.88e-12 | 68.2 |
MS.gene60522.t1 | AT5G22610 | 27.487 | 382 | 225 | 16 | 3 | 351 | 10 | 372 | 3.46e-12 | 67.8 |
MS.gene60522.t1 | AT3G60040 | 26.087 | 391 | 224 | 15 | 4 | 356 | 226 | 589 | 3.52e-12 | 68.2 |
MS.gene60522.t1 | AT3G60040 | 26.087 | 391 | 224 | 15 | 4 | 356 | 225 | 588 | 3.58e-12 | 68.2 |
MS.gene60522.t1 | AT2G26030 | 28.287 | 251 | 151 | 9 | 11 | 247 | 4 | 239 | 3.97e-12 | 67.4 |
MS.gene60522.t1 | AT2G26030 | 28.287 | 251 | 151 | 9 | 11 | 247 | 4 | 239 | 3.97e-12 | 67.4 |
MS.gene60522.t1 | AT2G26030 | 28.287 | 251 | 151 | 9 | 11 | 247 | 4 | 239 | 3.98e-12 | 67.4 |
MS.gene60522.t1 | AT5G50270 | 28.631 | 241 | 158 | 7 | 11 | 245 | 2 | 234 | 7.53e-12 | 65.9 |
MS.gene60522.t1 | AT1G66290 | 28.226 | 372 | 213 | 16 | 6 | 351 | 24 | 367 | 9.18e-12 | 66.6 |
MS.gene60522.t1 | AT1G69630 | 27.838 | 370 | 225 | 16 | 5 | 351 | 12 | 362 | 9.56e-12 | 66.2 |
MS.gene60522.t1 | AT3G26930 | 27.887 | 355 | 225 | 13 | 2 | 350 | 12 | 341 | 1.05e-11 | 66.2 |
MS.gene60522.t1 | AT3G49040 | 29.180 | 305 | 180 | 13 | 3 | 294 | 9 | 290 | 1.22e-11 | 65.5 |
MS.gene60522.t1 | AT5G44490 | 27.394 | 376 | 217 | 17 | 6 | 350 | 12 | 362 | 1.24e-11 | 66.2 |
MS.gene60522.t1 | AT5G44490 | 26.649 | 379 | 216 | 16 | 6 | 350 | 12 | 362 | 1.30e-11 | 66.2 |
MS.gene60522.t1 | AT3G58900 | 26.727 | 333 | 189 | 12 | 11 | 304 | 2 | 318 | 1.32e-11 | 65.5 |
MS.gene60522.t1 | AT3G58900 | 26.727 | 333 | 189 | 12 | 11 | 304 | 2 | 318 | 1.32e-11 | 65.5 |
MS.gene60522.t1 | AT3G58900 | 26.380 | 326 | 193 | 11 | 11 | 302 | 2 | 314 | 1.38e-11 | 65.1 |
MS.gene60522.t1 | AT4G03220 | 26.176 | 340 | 214 | 11 | 11 | 319 | 24 | 357 | 1.59e-11 | 65.9 |
MS.gene60522.t1 | AT3G58940 | 25.208 | 361 | 226 | 10 | 11 | 351 | 2 | 338 | 1.95e-11 | 65.9 |
MS.gene60522.t1 | AT3G58940 | 25.208 | 361 | 226 | 10 | 11 | 351 | 2 | 338 | 1.95e-11 | 65.9 |
MS.gene60522.t1 | AT5G22660 | 25.474 | 369 | 230 | 13 | 10 | 354 | 12 | 359 | 2.19e-11 | 65.5 |
MS.gene60522.t1 | AT1G32020 | 32.374 | 139 | 86 | 4 | 9 | 142 | 2 | 137 | 2.29e-11 | 62.4 |
MS.gene60522.t1 | AT5G38392 | 37.762 | 143 | 78 | 3 | 11 | 142 | 2 | 144 | 2.62e-11 | 63.2 |
MS.gene60522.t1 | AT5G22700 | 30.435 | 207 | 122 | 6 | 1 | 198 | 28 | 221 | 3.25e-11 | 64.7 |
MS.gene60522.t1 | AT4G13985 | 28.108 | 370 | 225 | 16 | 6 | 350 | 14 | 367 | 5.73e-11 | 63.9 |
MS.gene60522.t1 | AT3G54910 | 28.070 | 285 | 176 | 10 | 77 | 357 | 29 | 288 | 5.97e-11 | 63.5 |
MS.gene60522.t1 | AT3G54910 | 28.070 | 285 | 176 | 10 | 77 | 357 | 29 | 288 | 5.97e-11 | 63.5 |
MS.gene60522.t1 | AT3G54910 | 28.070 | 285 | 176 | 10 | 77 | 357 | 29 | 288 | 5.97e-11 | 63.5 |
MS.gene60522.t1 | AT5G41630 | 25.840 | 387 | 223 | 14 | 10 | 351 | 11 | 378 | 6.87e-11 | 63.9 |
MS.gene60522.t1 | AT5G38590 | 32.374 | 139 | 91 | 3 | 11 | 147 | 2 | 139 | 9.54e-11 | 62.4 |
Find 64 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCACAATTTATCATCTTTA+TGG | 0.083639 | 1.2:+68422689 | MS.gene60522:CDS |
TAGAATTGAACACAATAAAT+TGG | 0.287192 | 1.2:-68422158 | None:intergenic |
TCACAATTTATCATCTTTAT+GGG | 0.300522 | 1.2:+68422690 | MS.gene60522:CDS |
ATGGCAAGATCCCTAAGTTT+TGG | 0.321820 | 1.2:-68422769 | None:intergenic |
CGTCTGAGAGATTGCTTAAT+CGG | 0.330764 | 1.2:-68421693 | None:intergenic |
TGTTTGTTTATGCCTGTTGC+TGG | 0.348355 | 1.2:+68422318 | MS.gene60522:CDS |
GCTCGTGGTCTTAAAATTGC+GGG | 0.358867 | 1.2:+68422068 | MS.gene60522:CDS |
GGAAAGCCTAAGGGGCAATA+AGG | 0.368330 | 1.2:-68422034 | None:intergenic |
AAAGTCGAGGTTGGGGATCT+TGG | 0.370916 | 1.2:-68421803 | None:intergenic |
AAGAGTAGCTCGATCGAGAT+TGG | 0.392000 | 1.2:-68422442 | None:intergenic |
AAATATCTGAAAATTGTTGT+TGG | 0.393636 | 1.2:+68422716 | MS.gene60522:CDS |
GGTAATTCAAAGTCGAGGTT+GGG | 0.396592 | 1.2:-68421811 | None:intergenic |
AGGAACTTGAGTTGGATTGT+AGG | 0.406450 | 1.2:+68421995 | MS.gene60522:CDS |
TTTACATGACAGCATGAAAC+AGG | 0.411226 | 1.2:+68422251 | MS.gene60522:CDS |
GACATAGGGTCCGTAGTCTT+TGG | 0.417125 | 1.2:-68421832 | None:intergenic |
CAAGGTTGAGGAACTTGAGT+TGG | 0.435490 | 1.2:+68421987 | MS.gene60522:CDS |
ATATACAGATTGGATAGCTT+TGG | 0.440002 | 1.2:-68421857 | None:intergenic |
GACCACGAGCGACTTAGAAA+TGG | 0.441343 | 1.2:-68422055 | None:intergenic |
ACCATATGATATGCACTTGT+GGG | 0.445487 | 1.2:+68421945 | MS.gene60522:CDS |
TACAGAATGCTCCAAAACTT+AGG | 0.453885 | 1.2:+68422758 | MS.gene60522:CDS |
ACAGAATGCTCCAAAACTTA+GGG | 0.466812 | 1.2:+68422759 | MS.gene60522:CDS |
ACCCACAAGTGCATATCATA+TGG | 0.486209 | 1.2:-68421946 | None:intergenic |
CAAACGTTGGAACCAGCAAC+AGG | 0.493940 | 1.2:-68422330 | None:intergenic |
ACTTAGGGATCTTGCCATTG+AGG | 0.495226 | 1.2:+68422774 | MS.gene60522:CDS |
AATGAATACTCTCTTTAATG+AGG | 0.503823 | 1.2:-68422295 | None:intergenic |
GGAGAGCTGCATATACAGAT+TGG | 0.504410 | 1.2:-68421867 | None:intergenic |
AGCCTAAGGGGCAATAAGGT+TGG | 0.508182 | 1.2:-68422030 | None:intergenic |
TCAAAAGAAGTATTAAGTCT+TGG | 0.511825 | 1.2:-68422102 | None:intergenic |
TGGTAATTCAAAGTCGAGGT+TGG | 0.512610 | 1.2:-68421812 | None:intergenic |
ACTTAGAAATGGAAAGCCTA+AGG | 0.512993 | 1.2:-68422044 | None:intergenic |
CTGAAAACTTAAGAAAACTA+AGG | 0.513588 | 1.2:+68421899 | MS.gene60522:CDS |
GGATAGCTTTGGACGACATA+GGG | 0.522977 | 1.2:-68421846 | None:intergenic |
TTGTAGATAGAACACTTGTT+CGG | 0.523361 | 1.2:-68421762 | None:intergenic |
CAAGTGTTCTATCTACAAGA+TGG | 0.524434 | 1.2:+68421767 | MS.gene60522:CDS |
ATCTCGTTGTCGACATCTTG+AGG | 0.524833 | 1.2:+68422221 | MS.gene60522:CDS |
AGCATTAGACCTCAAGGTTG+AGG | 0.528928 | 1.2:+68421975 | MS.gene60522:CDS |
TGGATAGCTTTGGACGACAT+AGG | 0.530152 | 1.2:-68421847 | None:intergenic |
TTCAAAAGCATTAGACCTCA+AGG | 0.530430 | 1.2:+68421969 | MS.gene60522:CDS |
GTAATTCAAAGTCGAGGTTG+GGG | 0.532933 | 1.2:-68421810 | None:intergenic |
TCTTCGCATTTCTAAGCATG+TGG | 0.534563 | 1.2:+68422461 | MS.gene60522:CDS |
TATGAAGAACTTCAAGTGAC+GGG | 0.538915 | 1.2:-68422371 | None:intergenic |
AATATTCATACACACCTCAA+TGG | 0.541265 | 1.2:-68422788 | None:intergenic |
AACCAACCTTATTGCCCCTT+AGG | 0.541824 | 1.2:+68422028 | MS.gene60522:CDS |
CGCTCGTGGTCTTAAAATTG+CGG | 0.545262 | 1.2:+68422067 | MS.gene60522:CDS |
CTTCGAATCTGATGAAGAGC+AGG | 0.545606 | 1.2:+68421669 | MS.gene60522:CDS |
CTTTGAATTACCAAAGACTA+CGG | 0.554957 | 1.2:+68421822 | MS.gene60522:CDS |
CTTAGAAATGGAAAGCCTAA+GGG | 0.556919 | 1.2:-68422043 | None:intergenic |
TTCCATTTCTAAGTCGCTCG+TGG | 0.557905 | 1.2:+68422053 | MS.gene60522:CDS |
CACCATATGATATGCACTTG+TGG | 0.561872 | 1.2:+68421944 | MS.gene60522:CDS |
CTAAGGCTGTATAGTGACAA+TGG | 0.570792 | 1.2:+68421916 | MS.gene60522:CDS |
ATGAATACTCTCTTTAATGA+GGG | 0.572741 | 1.2:-68422294 | None:intergenic |
AAGTGTTCTATCTACAAGAT+GGG | 0.574630 | 1.2:+68421768 | MS.gene60522:CDS |
CAATAAGGTTGGTTTCTCGA+TGG | 0.577411 | 1.2:-68422019 | None:intergenic |
AGTTTGTATTCACTCTTGAG+AGG | 0.580698 | 1.2:+68422492 | MS.gene60522:CDS |
TATTGTGTTCAATTCTATCG+TGG | 0.588347 | 1.2:+68422164 | MS.gene60522:CDS |
AGTTTAAGAATCTTTAGTGA+CGG | 0.599013 | 1.2:-68422135 | None:intergenic |
ATATGAAGAACTTCAAGTGA+CGG | 0.613196 | 1.2:-68422372 | None:intergenic |
TCTTTGGTAATTCAAAGTCG+AGG | 0.633735 | 1.2:-68421816 | None:intergenic |
ACTCAAGTTCCTCAACCTTG+AGG | 0.635897 | 1.2:-68421984 | None:intergenic |
TTAGAAATGGAAAGCCTAAG+GGG | 0.656773 | 1.2:-68422042 | None:intergenic |
CTCGTGGTCTTAAAATTGCG+GGG | 0.658968 | 1.2:+68422069 | MS.gene60522:CDS |
TATGCAGTTTCTAAGCATGG+AGG | 0.674218 | 1.2:+68422636 | MS.gene60522:intron |
ATGAAGAACTTCAAGTGACG+GGG | 0.714715 | 1.2:-68422370 | None:intergenic |
GTGGTCTTAAAATTGCGGGG+TGG | 0.733026 | 1.2:+68422072 | MS.gene60522:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATGAAAAGTTATAATAAA+TGG | + | chr1.2:68423047-68423066 | MS.gene60522:intron | 10.0% |
!! | ATAAAAAACTAACAAAAACA+TGG | - | chr1.2:68423118-68423137 | None:intergenic | 15.0% |
!! | ATGCACAATTTAAAAAAAAA+TGG | + | chr1.2:68422822-68422841 | MS.gene60522:intron | 15.0% |
!! | AAATATCTGAAAATTGTTGT+TGG | + | chr1.2:68422716-68422735 | MS.gene60522:CDS | 20.0% |
!! | AAGATTGAGTAAAAGATATT+TGG | + | chr1.2:68422887-68422906 | MS.gene60522:intron | 20.0% |
!! | ACATAGGTTTATTTGTTTAT+CGG | - | chr1.2:68422928-68422947 | None:intergenic | 20.0% |
!! | GTAAACAATACCAAATATTA+TGG | - | chr1.2:68423201-68423220 | None:intergenic | 20.0% |
!! | TAGAATTGAACACAATAAAT+TGG | - | chr1.2:68422161-68422180 | None:intergenic | 20.0% |
!! | TCACAATTTATCATCTTTAT+GGG | + | chr1.2:68422690-68422709 | MS.gene60522:CDS | 20.0% |
!! | TGCATATGAGTAAATAAATA+TGG | - | chr1.2:68422605-68422624 | None:intergenic | 20.0% |
!! | TTCACAATTTATCATCTTTA+TGG | + | chr1.2:68422689-68422708 | MS.gene60522:CDS | 20.0% |
!!! | CTCATTACTTTTGAATTTAT+AGG | + | chr1.2:68423305-68423324 | MS.gene60522:intron | 20.0% |
!!! | CTTTTGAATTTATAGGAATT+CGG | + | chr1.2:68423312-68423331 | MS.gene60522:intron | 20.0% |
!!! | TTTGTAAACTCATATTTTCT+TGG | - | chr1.2:68422417-68422436 | None:intergenic | 20.0% |
! | AATGAATACTCTCTTTAATG+AGG | - | chr1.2:68422298-68422317 | None:intergenic | 25.0% |
! | AGATTGTTTAAAAGACATGT+CGG | - | chr1.2:68423287-68423306 | None:intergenic | 25.0% |
! | AGTTTAAGAATCTTTAGTGA+CGG | - | chr1.2:68422138-68422157 | None:intergenic | 25.0% |
! | ATGAATACTCTCTTTAATGA+GGG | - | chr1.2:68422297-68422316 | None:intergenic | 25.0% |
! | CTGAAAACTTAAGAAAACTA+AGG | + | chr1.2:68421899-68421918 | MS.gene60522:CDS | 25.0% |
! | TACAAGTATAGGTTAAACAT+AGG | - | chr1.2:68422944-68422963 | None:intergenic | 25.0% |
! | TTAATTTAGCCGTCATATAT+AGG | + | chr1.2:68422977-68422996 | MS.gene60522:intron | 25.0% |
!! | GAAGTTCTAACCATAATATT+TGG | + | chr1.2:68423188-68423207 | MS.gene60522:intron | 25.0% |
!!! | TCAAAAGAAGTATTAAGTCT+TGG | - | chr1.2:68422105-68422124 | None:intergenic | 25.0% |
AAGTGTTCTATCTACAAGAT+GGG | + | chr1.2:68421768-68421787 | MS.gene60522:CDS | 30.0% | |
AATATTCATACACACCTCAA+TGG | - | chr1.2:68422791-68422810 | None:intergenic | 30.0% | |
ATATACAGATTGGATAGCTT+TGG | - | chr1.2:68421860-68421879 | None:intergenic | 30.0% | |
ATATGAAGAACTTCAAGTGA+CGG | - | chr1.2:68422375-68422394 | None:intergenic | 30.0% | |
CATAGATAGCCTATATATGA+CGG | - | chr1.2:68422989-68423008 | None:intergenic | 30.0% | |
CTTTGAATTACCAAAGACTA+CGG | + | chr1.2:68421822-68421841 | MS.gene60522:CDS | 30.0% | |
TATTGTGTTCAATTCTATCG+TGG | + | chr1.2:68422164-68422183 | MS.gene60522:CDS | 30.0% | |
TTACTCACTACTACAAGTAT+AGG | - | chr1.2:68422955-68422974 | None:intergenic | 30.0% | |
TTGTAGATAGAACACTTGTT+CGG | - | chr1.2:68421765-68421784 | None:intergenic | 30.0% | |
! | TTTTATGCAGTTTCTAAGCA+TGG | + | chr1.2:68422633-68422652 | MS.gene60522:intron | 30.0% |
!!! | GAAAAATTTTGAAACCGAAG+AGG | + | chr1.2:68423226-68423245 | MS.gene60522:intron | 30.0% |
AAGAGGTTGAAAATACAGGT+TGG | + | chr1.2:68423243-68423262 | MS.gene60522:intron | 35.0% | |
ACAGAATGCTCCAAAACTTA+GGG | + | chr1.2:68422759-68422778 | MS.gene60522:CDS | 35.0% | |
ACCATATGATATGCACTTGT+GGG | + | chr1.2:68421945-68421964 | MS.gene60522:CDS | 35.0% | |
ACTTAGAAATGGAAAGCCTA+AGG | - | chr1.2:68422047-68422066 | None:intergenic | 35.0% | |
AGAGGTTGAAAATACAGGTT+GGG | + | chr1.2:68423244-68423263 | MS.gene60522:intron | 35.0% | |
AGTTTGTATTCACTCTTGAG+AGG | + | chr1.2:68422492-68422511 | MS.gene60522:CDS | 35.0% | |
CAAGTGTTCTATCTACAAGA+TGG | + | chr1.2:68421767-68421786 | MS.gene60522:CDS | 35.0% | |
CTTAGAAATGGAAAGCCTAA+GGG | - | chr1.2:68422046-68422065 | None:intergenic | 35.0% | |
TAAAAGACATGTCGGAGTTT+CGG | - | chr1.2:68423279-68423298 | None:intergenic | 35.0% | |
TACAGAATGCTCCAAAACTT+AGG | + | chr1.2:68422758-68422777 | MS.gene60522:CDS | 35.0% | |
TATGAAGAACTTCAAGTGAC+GGG | - | chr1.2:68422374-68422393 | None:intergenic | 35.0% | |
TTAGAAATGGAAAGCCTAAG+GGG | - | chr1.2:68422045-68422064 | None:intergenic | 35.0% | |
TTTACATGACAGCATGAAAC+AGG | + | chr1.2:68422251-68422270 | MS.gene60522:CDS | 35.0% | |
! | AATTTTCACTGGACAAACGT+TGG | - | chr1.2:68422346-68422365 | None:intergenic | 35.0% |
! | ACCTGTATTTTCAACCTCTT+CGG | - | chr1.2:68423243-68423262 | None:intergenic | 35.0% |
! | TCTTTGGTAATTCAAAGTCG+AGG | - | chr1.2:68421819-68421838 | None:intergenic | 35.0% |
! | TTAAGTTTTCAGTGCGTCTT+AGG | - | chr1.2:68421891-68421910 | None:intergenic | 35.0% |
!! | TTCAAAAGCATTAGACCTCA+AGG | + | chr1.2:68421969-68421988 | MS.gene60522:CDS | 35.0% |
!!! | GGTAAGACTCTTTTGTTGTT+AGG | - | chr1.2:68421744-68421763 | None:intergenic | 35.0% |
AATCTTTGCACGTCTTGTGA+TGG | - | chr1.2:68422873-68422892 | None:intergenic | 40.0% | |
ACCCACAAGTGCATATCATA+TGG | - | chr1.2:68421949-68421968 | None:intergenic | 40.0% | |
ACCGAAGAGGTTGAAAATAC+AGG | + | chr1.2:68423239-68423258 | MS.gene60522:intron | 40.0% | |
ATGAAGAACTTCAAGTGACG+GGG | - | chr1.2:68422373-68422392 | None:intergenic | 40.0% | |
CACCATATGATATGCACTTG+TGG | + | chr1.2:68421944-68421963 | MS.gene60522:CDS | 40.0% | |
CGTCTGAGAGATTGCTTAAT+CGG | - | chr1.2:68421696-68421715 | None:intergenic | 40.0% | |
CTAAGGCTGTATAGTGACAA+TGG | + | chr1.2:68421916-68421935 | MS.gene60522:CDS | 40.0% | |
GCTTCGTGTATTGTCTACAT+GGG | - | chr1.2:68423144-68423163 | None:intergenic | 40.0% | |
GGTAATTCAAAGTCGAGGTT+GGG | - | chr1.2:68421814-68421833 | None:intergenic | 40.0% | |
GTAATTCAAAGTCGAGGTTG+GGG | - | chr1.2:68421813-68421832 | None:intergenic | 40.0% | |
TATGCAGTTTCTAAGCATGG+AGG | + | chr1.2:68422636-68422655 | MS.gene60522:intron | 40.0% | |
TCTTCGCATTTCTAAGCATG+TGG | + | chr1.2:68422461-68422480 | MS.gene60522:CDS | 40.0% | |
TGCTTCGTGTATTGTCTACA+TGG | - | chr1.2:68423145-68423164 | None:intergenic | 40.0% | |
TGGTAATTCAAAGTCGAGGT+TGG | - | chr1.2:68421815-68421834 | None:intergenic | 40.0% | |
TGTTTGTTTATGCCTGTTGC+TGG | + | chr1.2:68422318-68422337 | MS.gene60522:CDS | 40.0% | |
! | ATGGCAAGATCCCTAAGTTT+TGG | - | chr1.2:68422772-68422791 | None:intergenic | 40.0% |
! | GTTGAAAATACAGGTTGGGT+GGG | + | chr1.2:68423248-68423267 | MS.gene60522:intron | 40.0% |
! | TTGAAAATACAGGTTGGGTG+GGG | + | chr1.2:68423249-68423268 | MS.gene60522:intron | 40.0% |
!! | AGGAACTTGAGTTGGATTGT+AGG | + | chr1.2:68421995-68422014 | MS.gene60522:CDS | 40.0% |
!! | CAATAAGGTTGGTTTCTCGA+TGG | - | chr1.2:68422022-68422041 | None:intergenic | 40.0% |
AACCAACCTTATTGCCCCTT+AGG | + | chr1.2:68422028-68422047 | MS.gene60522:CDS | 45.0% | |
AAGAGTAGCTCGATCGAGAT+TGG | - | chr1.2:68422445-68422464 | None:intergenic | 45.0% | |
ACTCAAGTTCCTCAACCTTG+AGG | - | chr1.2:68421987-68422006 | None:intergenic | 45.0% | |
ACTTAGGGATCTTGCCATTG+AGG | + | chr1.2:68422774-68422793 | MS.gene60522:CDS | 45.0% | |
AGCATTAGACCTCAAGGTTG+AGG | + | chr1.2:68421975-68421994 | MS.gene60522:CDS | 45.0% | |
ATCTCGTTGTCGACATCTTG+AGG | + | chr1.2:68422221-68422240 | MS.gene60522:CDS | 45.0% | |
CAAGGTTGAGGAACTTGAGT+TGG | + | chr1.2:68421987-68422006 | MS.gene60522:CDS | 45.0% | |
CTTCGAATCTGATGAAGAGC+AGG | + | chr1.2:68421669-68421688 | MS.gene60522:CDS | 45.0% | |
GGAGAGCTGCATATACAGAT+TGG | - | chr1.2:68421870-68421889 | None:intergenic | 45.0% | |
TTCCATTTCTAAGTCGCTCG+TGG | + | chr1.2:68422053-68422072 | MS.gene60522:CDS | 45.0% | |
! | CGCTCGTGGTCTTAAAATTG+CGG | + | chr1.2:68422067-68422086 | MS.gene60522:CDS | 45.0% |
! | CTCGTGGTCTTAAAATTGCG+GGG | + | chr1.2:68422069-68422088 | MS.gene60522:CDS | 45.0% |
! | GCTCGTGGTCTTAAAATTGC+GGG | + | chr1.2:68422068-68422087 | MS.gene60522:CDS | 45.0% |
! | GGTTGAAAATACAGGTTGGG+TGG | + | chr1.2:68423247-68423266 | MS.gene60522:intron | 45.0% |
!! | GACGGGGCATTAATTTTCAC+TGG | - | chr1.2:68422357-68422376 | None:intergenic | 45.0% |
!! | GGATAGCTTTGGACGACATA+GGG | - | chr1.2:68421849-68421868 | None:intergenic | 45.0% |
!! | TGGATAGCTTTGGACGACAT+AGG | - | chr1.2:68421850-68421869 | None:intergenic | 45.0% |
AAAGTCGAGGTTGGGGATCT+TGG | - | chr1.2:68421806-68421825 | None:intergenic | 50.0% | |
AGACATGTCGGAGTTTCGGA+TGG | - | chr1.2:68423275-68423294 | None:intergenic | 50.0% | |
AGCCTAAGGGGCAATAAGGT+TGG | - | chr1.2:68422033-68422052 | None:intergenic | 50.0% | |
CAAACGTTGGAACCAGCAAC+AGG | - | chr1.2:68422333-68422352 | None:intergenic | 50.0% | |
GACATAGGGTCCGTAGTCTT+TGG | - | chr1.2:68421835-68421854 | None:intergenic | 50.0% | |
GACCACGAGCGACTTAGAAA+TGG | - | chr1.2:68422058-68422077 | None:intergenic | 50.0% | |
GGAAAGCCTAAGGGGCAATA+AGG | - | chr1.2:68422037-68422056 | None:intergenic | 50.0% | |
! | GTGGTCTTAAAATTGCGGGG+TGG | + | chr1.2:68422072-68422091 | MS.gene60522:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 68421661 | 68423353 | 68421661 | ID=MS.gene60522 |
chr1.2 | mRNA | 68421661 | 68423353 | 68421661 | ID=MS.gene60522.t1;Parent=MS.gene60522 |
chr1.2 | exon | 68421661 | 68422560 | 68421661 | ID=MS.gene60522.t1.exon1;Parent=MS.gene60522.t1 |
chr1.2 | CDS | 68421661 | 68422560 | 68421661 | ID=cds.MS.gene60522.t1;Parent=MS.gene60522.t1 |
chr1.2 | exon | 68422643 | 68422795 | 68422643 | ID=MS.gene60522.t1.exon2;Parent=MS.gene60522.t1 |
chr1.2 | CDS | 68422643 | 68422795 | 68422643 | ID=cds.MS.gene60522.t1;Parent=MS.gene60522.t1 |
chr1.2 | exon | 68423327 | 68423353 | 68423327 | ID=MS.gene60522.t1.exon3;Parent=MS.gene60522.t1 |
chr1.2 | CDS | 68423327 | 68423353 | 68423327 | ID=cds.MS.gene60522.t1;Parent=MS.gene60522.t1 |
Gene Sequence |
Protein sequence |