AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36804

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36804.t1 MTR_8g014160 49.000 400 137 12 102 447 39 425 2.07e-100 306
MS.gene36804.t1 MTR_8g014260 37.684 475 163 15 82 447 1 451 3.77e-68 224
MS.gene36804.t1 MTR_8g445780 36.409 401 154 10 92 402 1 390 2.19e-60 202
MS.gene36804.t1 MTR_8g077460 35.878 393 184 13 100 447 6 375 8.77e-59 197
MS.gene36804.t1 MTR_8g014220 56.545 191 35 5 82 255 1 160 1.86e-55 181
MS.gene36804.t1 MTR_8g014230 89.655 87 9 0 361 447 18 104 1.23e-48 162
MS.gene36804.t1 MTR_8g467800 31.770 469 198 16 85 447 1 453 9.55e-47 167
MS.gene36804.t1 MTR_8g468760 33.255 424 196 13 100 446 5 418 1.16e-46 166
MS.gene36804.t1 MTR_2g083840 33.481 451 179 17 104 447 21 457 1.54e-46 167
MS.gene36804.t1 MTR_8g062310 31.724 435 175 16 104 447 25 428 1.99e-44 160
MS.gene36804.t1 MTR_4g024745 40.364 275 93 7 217 430 19 283 3.49e-44 156
MS.gene36804.t1 MTR_4g024710 39.590 293 105 8 217 447 65 347 8.26e-44 157
MS.gene36804.t1 MTR_8g468840 31.626 449 186 15 103 444 13 447 1.39e-43 159
MS.gene36804.t1 MTR_8g058965 31.303 476 187 18 92 447 1 456 5.70e-43 157
MS.gene36804.t1 MTR_8g070950 30.531 452 190 16 96 447 7 434 2.24e-41 152
MS.gene36804.t1 MTR_5g092960 36.391 327 141 12 92 361 5 321 4.68e-40 148
MS.gene36804.t1 MTR_5g092960 36.391 327 141 12 92 361 5 321 4.68e-40 149
MS.gene36804.t1 MTR_5g092960 46.914 81 39 3 368 446 383 461 7.78e-13 70.5
MS.gene36804.t1 MTR_8g469020 30.586 461 187 16 104 447 7 451 1.30e-38 145
MS.gene36804.t1 MTR_8g467800 34.568 324 150 10 85 361 1 309 1.40e-37 140
MS.gene36804.t1 MTR_8g062270 33.687 377 181 13 104 430 16 373 1.63e-37 142
MS.gene36804.t1 MTR_8g062010 30.317 442 202 17 98 447 3 430 5.87e-36 137
MS.gene36804.t1 MTR_8g058970 33.235 340 157 12 82 361 1 330 6.81e-36 138
MS.gene36804.t1 MTR_8g058970 46.154 78 38 2 374 447 400 477 1.20e-13 73.2
MS.gene36804.t1 MTR_8g014210 40.086 232 73 6 277 447 5 231 3.21e-35 130
MS.gene36804.t1 MTR_8g062080 28.795 448 190 15 104 447 23 445 6.02e-35 135
MS.gene36804.t1 MTR_4g113810 46.835 158 54 3 185 317 16 168 2.07e-34 126
MS.gene36804.t1 MTR_8g468810 30.556 396 188 17 86 421 4 372 2.33e-31 124
MS.gene36804.t1 MTR_8g468810 32.229 332 149 13 86 361 4 315 5.36e-31 122
MS.gene36804.t1 MTR_8g468810 32.229 332 149 13 86 361 4 315 7.13e-31 121
MS.gene36804.t1 MTR_8g468810 30.633 395 183 18 86 418 4 369 1.29e-30 123
MS.gene36804.t1 MTR_8g468810 48.780 82 38 2 370 447 382 463 1.32e-12 69.7
MS.gene36804.t1 MTR_8g468810 32.229 332 149 13 86 361 4 315 1.46e-30 121
MS.gene36804.t1 MTR_4g032730 33.514 370 177 17 94 416 5 352 2.60e-30 122
MS.gene36804.t1 MTR_4g032730 44.186 86 45 3 363 446 382 466 4.12e-12 68.2
MS.gene36804.t1 MTR_5g021550 44.295 149 50 4 85 210 3 141 1.24e-27 108
MS.gene36804.t1 MTR_4g050250 27.149 442 170 16 84 395 4 423 2.97e-25 107
MS.gene36804.t1 MTR_1g041245 28.571 399 207 13 104 447 11 386 1.55e-24 105
MS.gene36804.t1 MTR_0543s0010 27.419 372 235 11 103 446 85 449 2.06e-24 105
MS.gene36804.t1 MTR_8g014290 43.077 130 50 2 102 208 8 136 5.98e-24 98.2
MS.gene36804.t1 MTR_8g467790 34.562 217 93 6 104 280 148 355 6.90e-24 104
MS.gene36804.t1 MTR_7g098570 27.493 371 226 10 104 438 20 383 1.57e-23 103
MS.gene36804.t1 MTR_0492s0020 27.859 341 213 9 103 417 85 418 2.19e-23 102
MS.gene36804.t1 MTR_7g098480 28.141 398 199 14 98 438 12 379 2.97e-23 102
MS.gene36804.t1 MTR_3g107120 27.481 393 226 12 104 447 9 391 8.85e-23 100
MS.gene36804.t1 MTR_3g023630 26.271 354 210 12 104 419 8 348 5.25e-22 97.4
MS.gene36804.t1 MTR_5g058100 27.249 389 210 16 104 443 9 373 2.48e-21 95.9
MS.gene36804.t1 MTR_7g098510 26.768 396 228 14 98 447 12 391 2.68e-21 95.5
MS.gene36804.t1 MTR_7g032380 27.989 368 219 16 104 447 11 356 6.00e-21 94.4
MS.gene36804.t1 MTR_7g056430 27.273 374 208 14 103 438 8 355 7.36e-21 96.3
MS.gene36804.t1 MTR_7g056420 27.273 374 208 14 103 438 8 355 7.84e-21 96.3
MS.gene36804.t1 MTR_1089s0010 27.877 391 224 14 100 447 4 379 1.91e-20 93.2
MS.gene36804.t1 MTR_3g036250 27.100 369 224 10 101 438 2 356 5.34e-20 91.7
MS.gene36804.t1 MTR_7g026500 25.750 400 221 14 104 446 14 394 6.35e-20 91.7
MS.gene36804.t1 MTR_3g108150 26.076 395 221 13 103 446 12 386 7.79e-20 91.3
MS.gene36804.t1 MTR_3g107100 28.649 370 202 16 92 416 4 356 1.68e-19 90.5
MS.gene36804.t1 MTR_5g073420 27.324 355 195 14 104 416 11 344 2.83e-19 89.7
MS.gene36804.t1 MTR_7g056433 26.598 391 233 13 101 447 9 389 6.46e-19 88.6
MS.gene36804.t1 MTR_4g024720 36.691 139 54 3 82 198 1 127 7.99e-19 85.1
MS.gene36804.t1 MTR_4g024770 51.899 79 32 1 79 157 5 77 1.28e-18 80.5
MS.gene36804.t1 MTR_3g105060 24.668 377 234 12 104 447 14 373 1.61e-18 87.4
MS.gene36804.t1 MTR_7g114710 26.893 383 210 17 104 447 13 364 4.49e-18 85.9
MS.gene36804.t1 MTR_5g058000 26.613 372 222 12 104 438 8 365 5.13e-18 85.9
MS.gene36804.t1 MTR_6g040270 27.684 354 209 15 100 417 4 346 3.28e-17 83.6
MS.gene36804.t1 MTR_2g007500 28.443 334 192 14 98 393 8 332 8.03e-17 81.6
MS.gene36804.t1 MTR_2g007450 25.521 384 212 14 102 416 14 392 8.24e-17 82.4
MS.gene36804.t1 MTR_3g099830 25.575 348 211 11 104 416 12 346 2.17e-16 80.9
MS.gene36804.t1 MTR_7g007340 27.089 347 197 12 100 416 9 329 2.22e-16 80.9
MS.gene36804.t1 MTR_7g007370 26.176 340 203 9 97 418 10 319 4.45e-16 79.7
MS.gene36804.t1 MTR_8g062300 28.173 323 150 12 104 366 26 326 5.18e-16 80.5
MS.gene36804.t1 MTR_3g040700 25.507 345 196 10 102 406 41 364 8.92e-16 79.3
MS.gene36804.t1 MTR_3g467400 25.564 399 208 13 104 447 3 367 9.79e-16 79.0
MS.gene36804.t1 MTR_8g014180 56.061 66 23 1 82 147 1 60 1.27e-15 71.6
MS.gene36804.t1 MTR_4g039440 27.411 394 221 15 104 447 34 412 3.72e-15 77.4
MS.gene36804.t1 MTR_1g108820 27.945 365 193 15 104 417 8 353 6.39e-15 76.6
MS.gene36804.t1 MTR_5g008950 25.316 395 199 16 106 444 1 355 8.51e-15 76.3
MS.gene36804.t1 MTR_4g098590 25.707 389 212 14 106 433 1 373 1.68e-14 75.1
MS.gene36804.t1 MTR_7g007080 26.810 373 214 16 102 426 2 363 2.77e-14 74.7
MS.gene36804.t1 MTR_7g034115 26.471 374 215 14 104 433 11 368 4.37e-14 73.9
MS.gene36804.t1 MTR_5g045510 24.198 343 215 11 104 416 12 339 5.20e-14 73.6
MS.gene36804.t1 MTR_6g022360 25.606 371 226 14 80 416 21 375 5.51e-14 73.9
MS.gene36804.t1 MTR_5g045170 25.138 362 201 14 106 416 16 358 1.01e-13 72.8
MS.gene36804.t1 MTR_4g056040 29.483 329 152 13 101 359 6 324 1.32e-13 73.2
MS.gene36804.t1 MTR_3g107160 26.171 363 210 15 101 417 7 357 2.00e-13 72.0
MS.gene36804.t1 MTR_2g007360 25.562 356 195 12 104 414 12 342 3.74e-13 71.2
MS.gene36804.t1 MTR_3g099930 35.065 154 79 4 90 238 3 140 7.80e-13 67.0
MS.gene36804.t1 MTR_5g039950 28.125 288 156 10 96 359 15 275 7.92e-13 70.5
MS.gene36804.t1 MTR_1g115245 36.364 110 64 3 80 189 6 109 8.17e-13 69.3
MS.gene36804.t1 MTR_5g060570 43.902 82 33 1 103 184 16 84 1.51e-12 67.8
MS.gene36804.t1 MTR_7g084080 31.973 147 67 5 88 216 2 133 2.16e-12 67.8
MS.gene36804.t1 MTR_2g086020 43.011 93 50 3 358 447 223 315 2.72e-12 67.8
MS.gene36804.t1 MTR_7g056447 31.183 186 101 5 98 258 3 186 2.80e-12 67.8
MS.gene36804.t1 MTR_1g038760 51.852 54 26 0 102 155 13 66 4.01e-12 67.8
MS.gene36804.t1 MTR_1g038760 51.852 54 26 0 102 155 13 66 4.06e-12 67.8
MS.gene36804.t1 MTR_7g098590 61.818 55 19 1 98 152 12 64 7.02e-12 63.2
MS.gene36804.t1 MTR_3g115430 42.500 80 43 2 369 447 48 125 7.21e-12 62.8
MS.gene36804.t1 MTR_8g066650 38.144 97 46 1 88 184 64 146 7.37e-12 67.4
MS.gene36804.t1 MTR_3g463830 42.353 85 35 2 100 184 59 129 7.89e-12 67.0
MS.gene36804.t1 MTR_4g092430 37.815 119 58 3 69 187 10 112 8.45e-12 67.4
MS.gene36804.t1 MTR_3g071850 22.067 358 237 10 100 416 20 376 8.75e-12 67.8
MS.gene36804.t1 MTR_4g092430 37.815 119 58 3 69 187 10 112 8.99e-12 67.4
MS.gene36804.t1 MTR_4g092440 34.951 103 53 2 85 187 13 101 9.09e-12 67.0
MS.gene36804.t1 MTR_6g018660 48.571 70 36 0 85 154 1 70 9.63e-12 66.6
MS.gene36804.t1 MTR_4g092440 34.951 103 53 2 85 187 13 101 1.04e-11 67.4
MS.gene36804.t1 MTR_6g018600 45.000 80 39 2 79 154 24 102 1.07e-11 67.0
MS.gene36804.t1 MTR_7g021630 26.984 252 145 11 97 310 10 260 1.72e-11 65.9
MS.gene36804.t1 MTR_7g021630 26.984 252 145 11 97 310 10 260 1.84e-11 65.9
MS.gene36804.t1 MTR_7g055943 25.526 380 225 16 104 439 40 405 1.88e-11 66.2
MS.gene36804.t1 MTR_6g088705 40.476 84 38 2 101 184 16 87 2.09e-11 63.9
MS.gene36804.t1 MTR_5g087940 28.448 232 100 7 100 279 22 239 2.26e-11 65.9
MS.gene36804.t1 MTR_1g108820 31.606 193 87 6 100 259 4 184 2.27e-11 65.5
MS.gene36804.t1 MTR_2g091145 22.274 431 249 14 90 441 7 430 3.41e-11 65.5
MS.gene36804.t1 MTR_4g051480 49.057 53 27 0 101 153 22 74 3.50e-11 65.9
MS.gene36804.t1 MTR_4g092300 49.057 53 27 0 101 153 22 74 3.59e-11 65.9
MS.gene36804.t1 MTR_5g083890 23.592 373 223 11 103 416 5 374 4.35e-11 65.1
MS.gene36804.t1 MTR_7g115270 43.023 86 35 2 103 188 11 82 4.49e-11 64.7
MS.gene36804.t1 MTR_3g095600 31.792 173 93 7 104 260 4 167 5.03e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36804.t1 AT3G49030 26.265 415 225 17 98 446 15 414 1.19e-18 88.2
MS.gene36804.t1 AT4G26340 25.355 422 210 17 104 436 2 407 4.80e-17 83.2
MS.gene36804.t1 AT3G49030 25.517 435 229 18 98 446 15 440 2.99e-16 80.9
MS.gene36804.t1 AT3G59200 27.381 252 129 8 104 314 7 245 3.59e-14 75.1
MS.gene36804.t1 AT3G59200 27.490 251 128 8 104 313 7 244 4.11e-14 73.9
MS.gene36804.t1 AT5G56440 28.231 294 151 12 104 355 2 277 4.71e-14 74.3
MS.gene36804.t1 AT5G56560 23.165 436 227 17 101 447 2 418 4.77e-14 74.3
MS.gene36804.t1 AT2G26860 25.185 405 209 15 104 420 2 400 7.52e-14 73.6
MS.gene36804.t1 AT2G26860 25.185 405 209 15 104 420 2 400 7.52e-14 73.6
MS.gene36804.t1 AT5G56820 25.564 399 186 15 104 416 15 388 1.11e-13 73.2
MS.gene36804.t1 AT1G49610 30.698 215 97 9 101 301 23 199 3.43e-13 71.2
MS.gene36804.t1 AT3G52680 25.858 437 229 18 98 446 15 444 4.10e-13 71.2
MS.gene36804.t1 AT4G00160 25.571 438 231 17 98 446 10 441 5.04e-13 71.2
MS.gene36804.t1 AT5G60610 26.396 394 194 16 104 413 2 383 6.15e-13 70.5
MS.gene36804.t1 AT5G60610 26.396 394 194 16 104 413 2 383 6.15e-13 70.5
MS.gene36804.t1 AT3G28410 22.807 342 214 9 98 415 22 337 6.46e-13 70.9
MS.gene36804.t1 AT3G49040 27.530 247 137 8 98 314 11 245 6.92e-13 69.7
MS.gene36804.t1 AT4G00320 30.151 199 93 6 104 259 13 208 2.30e-12 69.3
MS.gene36804.t1 AT5G02700 24.903 257 161 6 98 330 21 269 3.91e-12 68.6
MS.gene36804.t1 AT1G69630 28.495 186 108 5 100 260 14 199 8.14e-12 67.4
MS.gene36804.t1 AT4G14103 28.826 281 129 12 99 327 3 264 8.26e-12 67.4
MS.gene36804.t1 AT5G56690 29.493 217 118 8 106 291 4 216 1.18e-11 66.6
MS.gene36804.t1 AT4G14103 28.826 281 129 12 99 327 3 264 1.57e-11 66.2
MS.gene36804.t1 AT4G14103 28.826 281 129 12 99 327 3 264 1.57e-11 66.2
MS.gene36804.t1 AT5G41830 30.435 230 112 8 104 288 13 239 1.78e-11 66.6
MS.gene36804.t1 AT1G51370 29.048 210 127 7 97 288 12 217 2.06e-11 65.5
MS.gene36804.t1 AT4G13965 25.197 381 196 14 104 405 10 380 2.09e-11 65.9
MS.gene36804.t1 AT1G51370 29.048 210 127 7 97 288 12 217 2.11e-11 65.9
MS.gene36804.t1 AT1G51370 29.048 210 127 7 97 288 12 217 2.88e-11 65.5
MS.gene36804.t1 AT3G26930 25.114 438 221 16 103 447 20 443 3.43e-11 65.5

Find 95 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATAGCGATTCAATATTTA+TGG 0.175800 8.3:+74611714 None:intergenic
ACGAGGAAGGCATTCATTTC+AGG 0.244350 8.3:+74611631 None:intergenic
CTAGCCGGTGGCGCCATATT+TGG 0.249631 8.3:-74612211 MS.gene36804:CDS
AGGCTCCTCAATGCTCTCTC+TGG 0.249661 8.3:-74611337 MS.gene36804:CDS
TATTCAGAGTTTCGAGTATA+GGG 0.266789 8.3:+74611602 None:intergenic
CAACATCACTGAATCTGATT+TGG 0.283299 8.3:+74611440 None:intergenic
CAGATAAATTCTTCCAAATA+TGG 0.292985 8.3:+74612198 None:intergenic
GCTGAGTATATTCTGCAAAA+AGG 0.301888 8.3:-74609895 MS.gene36804:CDS
CAACTCTGCCATTGTTGATT+GGG 0.306437 8.3:+74612376 None:intergenic
CTACGTTCAAACAAGTGTTT+TGG 0.343922 8.3:-74612234 MS.gene36804:CDS
TCAACTCTGCCATTGTTGAT+TGG 0.353291 8.3:+74612375 None:intergenic
CTTTAAACTGAATAAAAGTT+AGG 0.359295 8.3:+74609950 None:intergenic
ACATGGGTGCGCTCTATCAT+TGG 0.360583 8.3:-74611975 MS.gene36804:CDS
TTGCTATCTGTCTGTCATAA+GGG 0.364148 8.3:+74612486 None:intergenic
AAGCACTTTCTAATCTTTGC+GGG 0.377917 8.3:-74612107 MS.gene36804:CDS
AGGTGTGATACGATACAATT+AGG 0.394431 8.3:+74609970 None:intergenic
GGGCAAGATTGGTATCGGTT+TGG 0.402456 8.3:+74612397 None:intergenic
AACCTGTAGCTCAGCCTCTA+TGG 0.405742 8.3:-74611739 MS.gene36804:intron
GAACTCGACCTCATAGTCTT+TGG 0.407350 8.3:-74611939 MS.gene36804:CDS
AGAGTTGACATTCAATTTGA+AGG 0.413356 8.3:+74612154 None:intergenic
TCAGCAAATAATAGCTCATC+TGG 0.414305 8.3:+74609913 None:intergenic
TTGACTCTGCCATTGTTGAT+TGG 0.415024 8.3:+74612534 None:intergenic
GGCTCCTCAATGCTCTCTCT+GGG 0.417473 8.3:-74611336 MS.gene36804:CDS
AACATCACTGAATCTGATTT+GGG 0.419270 8.3:+74611441 None:intergenic
GAATGTCGTACTTCTTGCTT+AGG 0.426988 8.3:+74609830 None:intergenic
ATTCAGTTTAAAGGATTTGA+AGG 0.427855 8.3:-74609940 MS.gene36804:CDS
AAGTAGCAGAAAACAAAGAT+AGG 0.433645 8.3:-74612337 MS.gene36804:CDS
ATAAATCAGTCAAATATAAG+TGG 0.440212 8.3:+74609769 None:intergenic
CAAGCACTTTCTAATCTTTG+CGG 0.440544 8.3:-74612108 MS.gene36804:CDS
GTATTCAGAGTTTCGAGTAT+AGG 0.443200 8.3:+74611601 None:intergenic
AATAGCGATTCAATATTTAT+GGG 0.443396 8.3:+74611715 None:intergenic
ATTGCTATCTGTCTGTCATA+AGG 0.443430 8.3:+74612485 None:intergenic
ATTGTTGATTGGGGCAAGAT+TGG 0.447720 8.3:+74612386 None:intergenic
CATGGGTGCGCTCTATCATT+GGG 0.458446 8.3:-74611974 MS.gene36804:CDS
GAGCAAGGTTGGTTTCAGTC+TGG 0.472831 8.3:+74612556 None:intergenic
ATGTGGCTCAGCATACAGTC+TGG 0.490223 8.3:+74612281 None:intergenic
GGGCAGAGTCGAACTCCAAC+CGG 0.493365 8.3:-74612445 MS.gene36804:CDS
CAGCGTAGTCGTCATGCAAA+AGG 0.499658 8.3:+74611575 None:intergenic
AGGTCGAGTTCCTTGAGGTC+AGG 0.500036 8.3:+74611951 None:intergenic
GATTGGGGCAAGATTGGTAT+CGG 0.501536 8.3:+74612392 None:intergenic
TCTTCCAAATATGGCGCCAC+CGG 0.506747 8.3:+74612207 None:intergenic
ACGTAAGAGAGATGACCATT+TGG 0.507101 8.3:+74612592 None:intergenic
TGGCAGAGTCAAACTCCAAC+CGG 0.511744 8.3:-74612523 MS.gene36804:CDS
TGGCAGATTCGAACTCCAAA+TGG 0.512825 8.3:-74612607 MS.gene36804:CDS
TTGCCTTCGCCTCTTTACTC+AGG 0.513334 8.3:-74611357 MS.gene36804:CDS
TGGCAGAGTTGAACTCCAAA+TGG 0.515284 8.3:-74612364 MS.gene36804:CDS
CAAATCAGATTCAGTGATGT+TGG 0.516932 8.3:-74611439 MS.gene36804:CDS
TATCATTGGGCCTGACCTCA+AGG 0.518813 8.3:-74611961 MS.gene36804:CDS
AACTCTGCCATTGTTGATTG+GGG 0.525601 8.3:+74612377 None:intergenic
ATTGTTGATTGGAGCAAGGT+TGG 0.530851 8.3:+74612545 None:intergenic
CAATGATGCAACAATTAACA+AGG 0.534441 8.3:-74612466 MS.gene36804:CDS
TATTGAATCGCTATTTGCTA+AGG 0.535073 8.3:-74611707 MS.gene36804:CDS
ATATCTAAAGTGCGAAGGGA+TGG 0.538030 8.3:-74609799 MS.gene36804:CDS
AGTTCTAACTTCTTTAGTGA+TGG 0.541659 8.3:+74611670 None:intergenic
GAAATGAATGCCTTCCTCGT+TGG 0.543017 8.3:-74611628 MS.gene36804:CDS
GAGCCTGAGTAAAGAGGCGA+AGG 0.544301 8.3:+74611354 None:intergenic
ATAAGATATCTAAAGTGCGA+AGG 0.553571 8.3:-74609804 MS.gene36804:CDS
ACGATACAATTAGGAACACT+TGG 0.556312 8.3:+74609979 None:intergenic
TGAATCGCTATTTGCTAAGG+AGG 0.557676 8.3:-74611704 MS.gene36804:CDS
AGTGTTCATGCTTGTAATGG+TGG 0.558053 8.3:-74611499 MS.gene36804:CDS
GATTATTGATGATATTTCAG+TGG 0.558139 8.3:-74609854 MS.gene36804:CDS
AAAAGTCGCATTTAGCAGGA+TGG 0.558623 8.3:-74610011 MS.gene36804:CDS
ATTGAGGAGCCTGAGTAAAG+AGG 0.562834 8.3:+74611348 None:intergenic
ATCAGTGTTCATGCTTGTAA+TGG 0.563681 8.3:-74611502 MS.gene36804:CDS
TATAGGGCAGCCAACGAGGA+AGG 0.568524 8.3:+74611618 None:intergenic
TTCAACCTCTTCAACGTAGG+TGG 0.575803 8.3:+74611526 None:intergenic
TGCTATCTGTCTGTCATAAG+GGG 0.580231 8.3:+74612487 None:intergenic
AAAGTCGCATTTAGCAGGAT+GGG 0.581217 8.3:-74610010 MS.gene36804:CDS
CAATATTTATGGGACCATAG+AGG 0.582047 8.3:+74611725 None:intergenic
GCACATCACCAAAGACTATG+AGG 0.583655 8.3:+74611931 None:intergenic
AAAGTGCTTGAATCTTTCGT+CGG 0.586646 8.3:+74612121 None:intergenic
TAAGATATCTAAAGTGCGAA+GGG 0.586695 8.3:-74609803 MS.gene36804:CDS
TAAATCAGTCAAATATAAGT+GGG 0.587284 8.3:+74609770 None:intergenic
GTTGAGTTGTTCAACAACAA+AGG 0.590107 8.3:-74611299 MS.gene36804:intron
GTGTGCCACCTACGTTGAAG+AGG 0.591785 8.3:-74611531 MS.gene36804:CDS
TTCAGTCTGGAAGAAGAAGA+AGG 0.596265 8.3:+74612569 None:intergenic
TGCCATTGTTGATTGGAGCA+AGG 0.597278 8.3:+74612541 None:intergenic
TGTGGCTCAGCATACAGTCT+GGG 0.603629 8.3:+74612282 None:intergenic
TTTCAGGCATGTCTATAGCA+CGG 0.607516 8.3:+74611647 None:intergenic
TTGGAAGGAAAGACAAGATG+TGG 0.607602 8.3:+74612264 None:intergenic
GGATAAGAAAGATGACCGGT+TGG 0.619000 8.3:+74612508 None:intergenic
CGAGTATAGGGCAGCCAACG+AGG 0.621139 8.3:+74611614 None:intergenic
GCAGATATTCAATCGACACA+TGG 0.623557 8.3:-74611992 MS.gene36804:intron
TGATCCCAGAGAGAGCATTG+AGG 0.624659 8.3:+74611332 None:intergenic
CAGATATTCAATCGACACAT+GGG 0.626492 8.3:-74611991 MS.gene36804:CDS
AAGGGTATATGAGAGATGAC+CGG 0.631763 8.3:+74612426 None:intergenic
CTATGAGGTCGAGTTCCTTG+AGG 0.639822 8.3:+74611946 None:intergenic
AAGGGGATAAGAAAGATGAC+CGG 0.642363 8.3:+74612504 None:intergenic
ACAGCGTGTTTACTCTTCGT+AGG 0.644307 8.3:-74612076 MS.gene36804:intron
AACCTTGCTCCAATCAACAA+TGG 0.651856 8.3:-74612543 MS.gene36804:CDS
AATCTTGCCCCAATCAACAA+TGG 0.655655 8.3:-74612384 MS.gene36804:CDS
TGTTGGCGACTTACAAAACA+TGG 0.661576 8.3:-74611422 MS.gene36804:CDS
GTATATGAGAGATGACCGGT+TGG 0.663027 8.3:+74612430 None:intergenic
AATGATGCAACAATTAACAA+GGG 0.688147 8.3:-74612465 MS.gene36804:CDS
GAAGGCAAAAGTATCACTCG+AGG 0.695705 8.3:+74611372 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAAAAGAGATTACAA+CGG - chr8.3:74611567-74611586 MS.gene36804:CDS 15.0%
!! ATAAATTAATGTATATGTAG+TGG - chr8.3:74611726-74611745 MS.gene36804:CDS 15.0%
!! CACTACTAATTTAAAAATAT+AGG + chr8.3:74611761-74611780 None:intergenic 15.0%
!!! TGTTTTTCATTGATAAAATA+CGG - chr8.3:74611199-74611218 MS.gene36804:intron 15.0%
!!! TTTTAACTTTTTCAAATAGA+TGG - chr8.3:74611590-74611609 MS.gene36804:CDS 15.0%
!! AAATAGCGATTCAATATTTA+TGG + chr8.3:74610671-74610690 None:intergenic 20.0%
!! AAGATGTAATGATACATATA+TGG + chr8.3:74612318-74612337 None:intergenic 20.0%
!! AAGGAAAAAACAACTTTATT+TGG + chr8.3:74611371-74611390 None:intergenic 20.0%
!! AATAGCGATTCAATATTTAT+GGG + chr8.3:74610670-74610689 None:intergenic 20.0%
!! ATAAATTTCACATCATTAAG+TGG + chr8.3:74612247-74612266 None:intergenic 20.0%
!! CTTTAAACTGAATAAAAGTT+AGG + chr8.3:74612435-74612454 None:intergenic 20.0%
!! TAGAAAATTATAGGAAATCA+TGG - chr8.3:74611957-74611976 MS.gene36804:CDS 20.0%
!! TCAAATAGATGGATAAATAA+AGG - chr8.3:74611601-74611620 MS.gene36804:CDS 20.0%
!! TGGATATCATAGAAAATTAT+AGG - chr8.3:74611948-74611967 MS.gene36804:CDS 20.0%
!! TGTTTGTTTAATGGTTTAAT+TGG - chr8.3:74612207-74612226 MS.gene36804:CDS 20.0%
!!! AAAGGTATAGTTTATTATCA+TGG - chr8.3:74611101-74611120 MS.gene36804:intron 20.0%
!!! AAGTTCTAATGTTTGTTTAA+TGG - chr8.3:74612198-74612217 MS.gene36804:CDS 20.0%
!!! AGGAAAAAACAACTTTATTT+GGG + chr8.3:74611370-74611389 None:intergenic 20.0%
!!! CTAACTTTTATTCAGTTTAA+AGG - chr8.3:74612433-74612452 MS.gene36804:CDS 20.0%
!!! GTTTTTCATTGATAAAATAC+GGG - chr8.3:74611200-74611219 MS.gene36804:intron 20.0%
! AATGATGCAACAATTAACAA+GGG - chr8.3:74609917-74609936 MS.gene36804:CDS 25.0%
! ATTACATCTTATGTATGTTG+TGG - chr8.3:74612328-74612347 MS.gene36804:CDS 25.0%
! ATTCAGTTTAAAGGATTTGA+AGG - chr8.3:74612442-74612461 MS.gene36804:CDS 25.0%
! CAGATAAATTCTTCCAAATA+TGG + chr8.3:74610187-74610206 None:intergenic 25.0%
! GTATAGTTTATTATCATGGT+TGG - chr8.3:74611105-74611124 MS.gene36804:intron 25.0%
! TCTCATAATTCAAAATGACA+AGG - chr8.3:74612169-74612188 MS.gene36804:CDS 25.0%
! TTTATTATCATGGTTGGAAT+TGG - chr8.3:74611111-74611130 MS.gene36804:intron 25.0%
!! GATTATTGATGATATTTCAG+TGG - chr8.3:74612528-74612547 MS.gene36804:CDS 25.0%
!! TATATGTGATAGTGATCATT+TGG + chr8.3:74612282-74612301 None:intergenic 25.0%
!!! ATTTTGCCATTTACTTCATT+TGG - chr8.3:74612076-74612095 MS.gene36804:intron 25.0%
AACATCACTGAATCTGATTT+GGG + chr8.3:74610944-74610963 None:intergenic 30.0%
AAGTAGCAGAAAACAAAGAT+AGG - chr8.3:74610045-74610064 MS.gene36804:intron 30.0%
AGAGTTGACATTCAATTTGA+AGG + chr8.3:74610231-74610250 None:intergenic 30.0%
ATATCGCTAACAATAATCCT+AGG - chr8.3:74611851-74611870 MS.gene36804:intron 30.0%
CAATGATGCAACAATTAACA+AGG - chr8.3:74609916-74609935 MS.gene36804:CDS 30.0%
GAAAAAGAAGATAGGATAAG+TGG - chr8.3:74610074-74610093 MS.gene36804:intron 30.0%
GATACGAAATTGTAAATGAC+TGG - chr8.3:74611176-74611195 MS.gene36804:intron 30.0%
GGATTATTGTTAGCGATATT+AGG + chr8.3:74611850-74611869 None:intergenic 30.0%
TCCAATATACACTAAAGACT+AGG + chr8.3:74611932-74611951 None:intergenic 30.0%
TGAAGTAAATGGCAAAATTC+TGG + chr8.3:74612074-74612093 None:intergenic 30.0%
TGAGTTCCAAATGAAGTAAA+TGG + chr8.3:74612085-74612104 None:intergenic 30.0%
TGTGAAATGTTGATCAATGA+CGG - chr8.3:74611540-74611559 MS.gene36804:CDS 30.0%
! AGTTCTAACTTCTTTAGTGA+TGG + chr8.3:74610715-74610734 None:intergenic 30.0%
! ATAAGATATCTAAAGTGCGA+AGG - chr8.3:74612578-74612597 MS.gene36804:CDS 30.0%
! ATATGTCTGAGATATGTCTA+CGG + chr8.3:74611499-74611518 None:intergenic 30.0%
! ATCTTTTTCTCTACTATCCT+AGG + chr8.3:74611871-74611890 None:intergenic 30.0%
! TAAGATATCTAAAGTGCGAA+GGG - chr8.3:74612579-74612598 MS.gene36804:CDS 30.0%
! TATTCAGAGTTTCGAGTATA+GGG + chr8.3:74610783-74610802 None:intergenic 30.0%
! TATTGAATCGCTATTTGCTA+AGG - chr8.3:74610675-74610694 MS.gene36804:intron 30.0%
!! GTTTGAACGTAGATTTTAGT+TGG + chr8.3:74610140-74610159 None:intergenic 30.0%
AAGCACTTTCTAATCTTTGC+GGG - chr8.3:74610275-74610294 MS.gene36804:intron 35.0%
AATAACATATGCTTGCCTGA+GGG + chr8.3:74610513-74610532 None:intergenic 35.0%
ACCTATATAGCAGTCATACA+AGG - chr8.3:74611421-74611440 MS.gene36804:CDS 35.0%
ACGATACAATTAGGAACACT+TGG + chr8.3:74612406-74612425 None:intergenic 35.0%
AGGTGTGATACGATACAATT+AGG + chr8.3:74612415-74612434 None:intergenic 35.0%
ATCAGTGTTCATGCTTGTAA+TGG - chr8.3:74610880-74610899 MS.gene36804:intron 35.0%
ATTGCTATCTGTCTGTCATA+AGG + chr8.3:74609900-74609919 None:intergenic 35.0%
CAAATCAGATTCAGTGATGT+TGG - chr8.3:74610943-74610962 MS.gene36804:intron 35.0%
CAACATCACTGAATCTGATT+TGG + chr8.3:74610945-74610964 None:intergenic 35.0%
CAAGCACTTTCTAATCTTTG+CGG - chr8.3:74610274-74610293 MS.gene36804:intron 35.0%
CAATATTTATGGGACCATAG+AGG + chr8.3:74610660-74610679 None:intergenic 35.0%
CAGATATTCAATCGACACAT+GGG - chr8.3:74610391-74610410 MS.gene36804:intron 35.0%
GATTGTATTCCTATGAAGCA+TGG + chr8.3:74611812-74611831 None:intergenic 35.0%
GCGATATTAGGTAGATTGTA+AGG + chr8.3:74611838-74611857 None:intergenic 35.0%
GCTGAGTATATTCTGCAAAA+AGG - chr8.3:74612487-74612506 MS.gene36804:CDS 35.0%
GGATCAGTGAAAAAGAAGAT+AGG - chr8.3:74610066-74610085 MS.gene36804:intron 35.0%
GTGAAATGTTGATCAATGAC+GGG - chr8.3:74611541-74611560 MS.gene36804:CDS 35.0%
TAATGTATATGTAGTGGCGT+CGG - chr8.3:74611732-74611751 MS.gene36804:CDS 35.0%
TAGGTACCATCATTGTTCTA+AGG + chr8.3:74611406-74611425 None:intergenic 35.0%
TCAGCAAATAATAGCTCATC+TGG + chr8.3:74612472-74612491 None:intergenic 35.0%
TTAATGAAGTGATCTGCTCA+AGG - chr8.3:74611656-74611675 MS.gene36804:CDS 35.0%
TTGCTATCTGTCTGTCATAA+GGG + chr8.3:74609899-74609918 None:intergenic 35.0%
! AAAGTGCTTGAATCTTTCGT+CGG + chr8.3:74610264-74610283 None:intergenic 35.0%
! ATTTTCAACCTCTTCAACGT+AGG + chr8.3:74610862-74610881 None:intergenic 35.0%
! CTACGTTCAAACAAGTGTTT+TGG - chr8.3:74610148-74610167 MS.gene36804:intron 35.0%
! GCCTAGTCTTTAGTGTATAT+TGG - chr8.3:74611928-74611947 MS.gene36804:intron 35.0%
! GTATTCAGAGTTTCGAGTAT+AGG + chr8.3:74610784-74610803 None:intergenic 35.0%
! GTTGAGTTGTTCAACAACAA+AGG - chr8.3:74611083-74611102 MS.gene36804:intron 35.0%
! TTCTGGAAAATGTAGATCAG+CGG + chr8.3:74612057-74612076 None:intergenic 35.0%
!! AGAAAATTCGAGTTGAACCA+CGG + chr8.3:74612113-74612132 None:intergenic 35.0%
!! GTATCGGTTTGGAAAAAGAA+GGG + chr8.3:74609977-74609996 None:intergenic 35.0%
!! TATGAAGTATTGACACCTCT+AGG - chr8.3:74611251-74611270 MS.gene36804:intron 35.0%
!! TCTAAGGAGTGTCAATGTAA+AGG + chr8.3:74611390-74611409 None:intergenic 35.0%
!! TGATCATTTGGAGTGTTGAA+TGG + chr8.3:74612270-74612289 None:intergenic 35.0%
!!! GAACGTAGATTTTAGTTGGA+AGG + chr8.3:74610136-74610155 None:intergenic 35.0%
!!! TTCTGCTACTTTTTGCCATT+TGG + chr8.3:74610036-74610055 None:intergenic 35.0%
AAAAGTCGCATTTAGCAGGA+TGG - chr8.3:74612371-74612390 MS.gene36804:CDS 40.0%
AAAGTCGCATTTAGCAGGAT+GGG - chr8.3:74612372-74612391 MS.gene36804:CDS 40.0%
AACCTTGCTCCAATCAACAA+TGG - chr8.3:74609839-74609858 MS.gene36804:CDS 40.0%
AAGGGGATAAGAAAGATGAC+CGG + chr8.3:74609881-74609900 None:intergenic 40.0%
AATCTTGCCCCAATCAACAA+TGG - chr8.3:74609998-74610017 MS.gene36804:CDS 40.0%
ACGTAAGAGAGATGACCATT+TGG + chr8.3:74609793-74609812 None:intergenic 40.0%
AGAGATGCAACTTCCTGATA+GGG + chr8.3:74610337-74610356 None:intergenic 40.0%
AGTGTTCATGCTTGTAATGG+TGG - chr8.3:74610883-74610902 MS.gene36804:intron 40.0%
CAGAAAAAGTCGCATTTAGC+AGG - chr8.3:74612367-74612386 MS.gene36804:CDS 40.0%
GAATAACATATGCTTGCCTG+AGG + chr8.3:74610514-74610533 None:intergenic 40.0%
GAATGTCGTACTTCTTGCTT+AGG + chr8.3:74612555-74612574 None:intergenic 40.0%
GACACTCCTTAGAACAATGA+TGG - chr8.3:74611397-74611416 MS.gene36804:CDS 40.0%
GCAGATATTCAATCGACACA+TGG - chr8.3:74610390-74610409 MS.gene36804:intron 40.0%
GCCTTGTATGACTGCTATAT+AGG + chr8.3:74611425-74611444 None:intergenic 40.0%
TCAACTCTGCCATTGTTGAT+TGG + chr8.3:74610010-74610029 None:intergenic 40.0%
TCTGGAAAATGTAGATCAGC+GGG + chr8.3:74612056-74612075 None:intergenic 40.0%
TGCTATCTGTCTGTCATAAG+GGG + chr8.3:74609898-74609917 None:intergenic 40.0%
TGTTGGCGACTTACAAAACA+TGG - chr8.3:74610960-74610979 MS.gene36804:intron 40.0%
TTCAGTCTGGAAGAAGAAGA+AGG + chr8.3:74609816-74609835 None:intergenic 40.0%
TTCGTAGGTAAAACCCTATC+AGG - chr8.3:74610321-74610340 MS.gene36804:intron 40.0%
TTGACTCTGCCATTGTTGAT+TGG + chr8.3:74609851-74609870 None:intergenic 40.0%
TTGGAAGGAAAGACAAGATG+TGG + chr8.3:74610121-74610140 None:intergenic 40.0%
TTTCAGGCATGTCTATAGCA+CGG + chr8.3:74610738-74610757 None:intergenic 40.0%
! AACTCTGCCATTGTTGATTG+GGG + chr8.3:74610008-74610027 None:intergenic 40.0%
! AAGGGTATATGAGAGATGAC+CGG + chr8.3:74609959-74609978 None:intergenic 40.0%
! ATATCTAAAGTGCGAAGGGA+TGG - chr8.3:74612583-74612602 MS.gene36804:CDS 40.0%
! ATTAGTAGTGTCGTTGTGTC+AGG - chr8.3:74611771-74611790 MS.gene36804:intron 40.0%
! ATTGTTGATTGGAGCAAGGT+TGG + chr8.3:74609840-74609859 None:intergenic 40.0%
! ATTGTTGATTGGGGCAAGAT+TGG + chr8.3:74609999-74610018 None:intergenic 40.0%
! ATTTGGAACTCATTCTTCCG+TGG - chr8.3:74612093-74612112 MS.gene36804:CDS 40.0%
! CAACTCTGCCATTGTTGATT+GGG + chr8.3:74610009-74610028 None:intergenic 40.0%
! GTATTGACACCTCTAGGAAT+AGG - chr8.3:74611257-74611276 MS.gene36804:intron 40.0%
! TGAATCGCTATTTGCTAAGG+AGG - chr8.3:74610678-74610697 MS.gene36804:intron 40.0%
! TTGTTGTTGCGAACAAACAG+TGG - chr8.3:74612018-74612037 MS.gene36804:intron 40.0%
!! GGTATCGGTTTGGAAAAAGA+AGG + chr8.3:74609978-74609997 None:intergenic 40.0%
!!! AAACAAGTGTTTTGGCTAGC+CGG - chr8.3:74610156-74610175 MS.gene36804:intron 40.0%
ACAGCGTGTTTACTCTTCGT+AGG - chr8.3:74610306-74610325 MS.gene36804:intron 45.0%
ATTGAGGAGCCTGAGTAAAG+AGG + chr8.3:74611037-74611056 None:intergenic 45.0%
CTGGAAAATGTAGATCAGCG+GGG + chr8.3:74612055-74612074 None:intergenic 45.0%
GAAATGAATGCCTTCCTCGT+TGG - chr8.3:74610754-74610773 MS.gene36804:intron 45.0%
GAACTCGACCTCATAGTCTT+TGG - chr8.3:74610443-74610462 MS.gene36804:intron 45.0%
GAGAGATGCAACTTCCTGAT+AGG + chr8.3:74610338-74610357 None:intergenic 45.0%
GATTGGGGCAAGATTGGTAT+CGG + chr8.3:74609993-74610012 None:intergenic 45.0%
GCACATCACCAAAGACTATG+AGG + chr8.3:74610454-74610473 None:intergenic 45.0%
GGATAAGAAAGATGACCGGT+TGG + chr8.3:74609877-74609896 None:intergenic 45.0%
GTATATGAGAGATGACCGGT+TGG + chr8.3:74609955-74609974 None:intergenic 45.0%
TGGCAGAGTTGAACTCCAAA+TGG - chr8.3:74610018-74610037 MS.gene36804:intron 45.0%
TGGCAGATTCGAACTCCAAA+TGG - chr8.3:74609775-74609794 MS.gene36804:CDS 45.0%
TTCAACCTCTTCAACGTAGG+TGG + chr8.3:74610859-74610878 None:intergenic 45.0%
! GAGGTTAGTTCAAGCAGAGA+GGG + chr8.3:74610486-74610505 None:intergenic 45.0%
! TGCCATTGTTGATTGGAGCA+AGG + chr8.3:74609844-74609863 None:intergenic 45.0%
!! ACGAGGAAGGCATTCATTTC+AGG + chr8.3:74610754-74610773 None:intergenic 45.0%
!! GAAGGCAAAAGTATCACTCG+AGG + chr8.3:74611013-74611032 None:intergenic 45.0%
AACCTGTAGCTCAGCCTCTA+TGG - chr8.3:74610643-74610662 MS.gene36804:intron 50.0%
ACATGGGTGCGCTCTATCAT+TGG - chr8.3:74610407-74610426 MS.gene36804:intron 50.0%
AGCAGTCATACAAGGCGTGT+TGG - chr8.3:74611429-74611448 MS.gene36804:CDS 50.0%
ATGTGGCTCAGCATACAGTC+TGG + chr8.3:74610104-74610123 None:intergenic 50.0%
CAGCGTAGTCGTCATGCAAA+AGG + chr8.3:74610810-74610829 None:intergenic 50.0%
CATGGGTGCGCTCTATCATT+GGG - chr8.3:74610408-74610427 MS.gene36804:intron 50.0%
CTATGAGGTCGAGTTCCTTG+AGG + chr8.3:74610439-74610458 None:intergenic 50.0%
GTTCAAGCAGAGAGGGAGAT+AGG + chr8.3:74610479-74610498 None:intergenic 50.0%
TATCATTGGGCCTGACCTCA+AGG - chr8.3:74610421-74610440 MS.gene36804:intron 50.0%
TCTTCCAAATATGGCGCCAC+CGG + chr8.3:74610178-74610197 None:intergenic 50.0%
TGGCAGAGTCAAACTCCAAC+CGG - chr8.3:74609859-74609878 MS.gene36804:CDS 50.0%
TGTCCGACCATGTCATACGA+GGG + chr8.3:74611333-74611352 None:intergenic 50.0%
TGTGGCTCAGCATACAGTCT+GGG + chr8.3:74610103-74610122 None:intergenic 50.0%
TTGCCTTCGCCTCTTTACTC+AGG - chr8.3:74611025-74611044 MS.gene36804:intron 50.0%
TTGTCCGACCATGTCATACG+AGG + chr8.3:74611334-74611353 None:intergenic 50.0%
! CGAGGTTAGTTCAAGCAGAG+AGG + chr8.3:74610487-74610506 None:intergenic 50.0%
!! GAGCAAGGTTGGTTTCAGTC+TGG + chr8.3:74609829-74609848 None:intergenic 50.0%
!! GGGCAAGATTGGTATCGGTT+TGG + chr8.3:74609988-74610007 None:intergenic 50.0%
!! TGATCCCAGAGAGAGCATTG+AGG + chr8.3:74611053-74611072 None:intergenic 50.0%
AGGCTCCTCAATGCTCTCTC+TGG - chr8.3:74611045-74611064 MS.gene36804:intron 55.0%
AGGTCGAGTTCCTTGAGGTC+AGG + chr8.3:74610434-74610453 None:intergenic 55.0%
ATGAAGCATGGTCTCCGACG+CGG + chr8.3:74611800-74611819 None:intergenic 55.0%
CGTCGGAGACCATGCTTCAT+AGG - chr8.3:74611800-74611819 MS.gene36804:intron 55.0%
GAACTAACCTCGTCTCCCTC+AGG - chr8.3:74610495-74610514 MS.gene36804:intron 55.0%
GACCATAGAGGCTGAGCTAC+AGG + chr8.3:74610648-74610667 None:intergenic 55.0%
GAGCCTGAGTAAAGAGGCGA+AGG + chr8.3:74611031-74611050 None:intergenic 55.0%
GGACCCTCGTATGACATGGT+CGG - chr8.3:74611327-74611346 MS.gene36804:CDS 55.0%
GGCTCCTCAATGCTCTCTCT+GGG - chr8.3:74611046-74611065 MS.gene36804:intron 55.0%
GTGTGCCACCTACGTTGAAG+AGG - chr8.3:74610851-74610870 MS.gene36804:intron 55.0%
TATAGGGCAGCCAACGAGGA+AGG + chr8.3:74610767-74610786 None:intergenic 55.0%
TTGCGGACCCTCGTATGACA+TGG - chr8.3:74611323-74611342 MS.gene36804:CDS 55.0%
! CTCTAGGAATAGGCGTGTCG+CGG - chr8.3:74611267-74611286 MS.gene36804:intron 55.0%
!!! CAAGTGTTTTGGCTAGCCGG+TGG - chr8.3:74610159-74610178 MS.gene36804:intron 55.0%
ATGCTTGCCTGAGGGAGACG+AGG + chr8.3:74610505-74610524 None:intergenic 60.0%
CGAGTATAGGGCAGCCAACG+AGG + chr8.3:74610771-74610790 None:intergenic 60.0%
CGCGACACGCCTATTCCTAG+AGG + chr8.3:74611269-74611288 None:intergenic 60.0%
CTAGCCGGTGGCGCCATATT+TGG - chr8.3:74610171-74610190 MS.gene36804:intron 60.0%
GGGCAGAGTCGAACTCCAAC+CGG - chr8.3:74609937-74609956 MS.gene36804:CDS 60.0%
GTCGCGGTGTCTAACACGTG+AGG - chr8.3:74611283-74611302 MS.gene36804:intron 60.0%
GTTGTGTCAGGTGTCCGCGT+CGG - chr8.3:74611783-74611802 MS.gene36804:intron 60.0%
TTGTCCGACACGCGTCGTTG+CGG - chr8.3:74611306-74611325 MS.gene36804:CDS 60.0%
GGGTCCGCAACGACGCGTGT+CGG + chr8.3:74611313-74611332 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 74609774 74612630 74609774 ID=MS.gene36804
chr8.3 mRNA 74609774 74612630 74609774 ID=MS.gene36804.t1;Parent=MS.gene36804
chr8.3 exon 74612077 74612630 74612077 ID=MS.gene36804.t1.exon1;Parent=MS.gene36804.t1
chr8.3 CDS 74612077 74612630 74612077 ID=cds.MS.gene36804.t1;Parent=MS.gene36804.t1
chr8.3 exon 74611935 74612010 74611935 ID=MS.gene36804.t1.exon2;Parent=MS.gene36804.t1
chr8.3 CDS 74611935 74612010 74611935 ID=cds.MS.gene36804.t1;Parent=MS.gene36804.t1
chr8.3 exon 74611300 74611752 74611300 ID=MS.gene36804.t1.exon3;Parent=MS.gene36804.t1
chr8.3 CDS 74611300 74611752 74611300 ID=cds.MS.gene36804.t1;Parent=MS.gene36804.t1
chr8.3 exon 74609774 74610034 74609774 ID=MS.gene36804.t1.exon4;Parent=MS.gene36804.t1
chr8.3 CDS 74609774 74610034 74609774 ID=cds.MS.gene36804.t1;Parent=MS.gene36804.t1
Gene Sequence

>MS.gene36804

ATGGCAGATTCGAACTCCAAATGGTCATCTCTCTTACGTCCTTCTTCTTCTTCCAGACTGAAACCAACCTTGCTCCAATCAACAATGGCAGAGTCAAACTCCAACCGGTCATCTTTCTTATCCCCTTATGACAGACAGATAGCAATGATGCAACAATTAACAAGGGCAGAGTCGAACTCCAACCGGTCATCTCTCATATACCCTTCTTTTTCCAAACCGATACCAATCTTGCCCCAATCAACAATGGCAGAGTTGAACTCCAAATGGCAAAAAGTAGCAGAAAACAAAGATAGGATCAGTGAAAAAGAAGATAGGATAAGTGGTCTCCCAGACTGTATGCTGAGCCACATCTTGTCTTTCCTTCCAACTAAAATCTACGTTCAAACAAGTGTTTTGGCTAGCCGGTGGCGCCATATTTGGAAGAATTTATCTGTTCTCAGCTTCTCTGACGACTCCTTCAAATTGAATGTCAACTCTATCAAAATAACCGACGAAAGATTCAAGCACTTTCTAATCTTTGCGGGTTTTGTAAACAGCGTGTTTACTCTTCGTAGGTAAAACCCTATCAGGAAGTTGCATCTCTCATGTATTAAATCTTTCGTCGACAACGAATTCTGCAGATATTCAATCGACACATGGGTGCGCTCTATCATTGGGCCTGACCTCAAGGAACTCGACCTCATAGTCTTTGGTGATGTGCTGCCTATCTCCCTCTCTGCTTGAACTAACCTCGTCTCCCTCAGGCAAGCATATGTTATTCATTCATTTTGTATAGTAGTATTGTGTTTTTTGATTATTATTAAAATTTCGTTAGAAATCAACGCTCTTTATGTGACATGACACGATTTGATGATAAAATGCTAACAATTAACCTGTAGCTCAGCCTCTATGGTCCCATAAATATTGAATCGCTATTTGCTAAGGAGGTGATTCGCTTACCATCACTAAAGAAGTTAGAACTCCGTGCTATAGACATGCCTGAAATGAATGCCTTCCTCGTTGGCTGCCCTATACTCGAAACTCTGAATACTTACCTTTTGCATGACGACTACGCTGACTTTAATGTCGCTGATTTTTGTGTGCCACCTACGTTGAAGAGGTTGAAAATCAGTGTTCATGCTTGTAATGGTGGTTTTGTCGCACATTGTTTTCACTATATTAACATTACCCAAATCAGATTCAGTGATGTTGGCGACTTACAAAACATGGTGAGAGCTTCTCTTGATGTTTTTCATTCCTCGAGTGATACTTTTGCCTTCGCCTCTTTACTCAGGCTCCTCAATGCTCTCTCTGGGATCAAATATCTAGCGTTGAGTTGTTCAACAACAAAGGTATAGTTTATTATCATGGTTGGAATTGGATATATATATATATATATATATATATATATATATATAAATATGATACGAAATTGTAAATGACTGGTGTTTTTCATTGATAAAATACGGGCATGTATATACAAGTCTTAGAATACAACTATGAAGTATTGACACCTCTAGGAATAGGCGTGTCGCGGTGTCTAACACGTGAGGTTGTCCGACACGCGTCGTTGCGGACCCTCGTATGACATGGTCGGACAACTCAGACAAGTGTCCCAAATAAAGTTGTTTTTTCCTTTACATTGACACTCCTTAGAACAATGATGGTACCTATATAGCAGTCATACAAGGCGTGTTGGACTATTCAGACAAATGTCTGCATTTTTTTTATTTGCTTCACTCTCCGTAGACATATCTCAGACATATCTACAAAAGTTAAACATGTGTTGTGAAATGTTGATCAATGACGGGTTAAATAATAAAAGAGATTACAACGGTTTTAACTTTTTCAAATAGATGGATAAATAAAGGTCAACAACTATCGTATCTTCTTTAAGAACTTTTTAATGAAGTGATCTGCTCAAGGTAGATGCAAATGTATGTATTTTGATTCTCAATTTAGATATTTTATTAATAAATTAATGTATATGTAGTGGCGTCGGTGTCCTATATTTTTAAATTAGTAGTGTCGTTGTGTCAGGTGTCCGCGTCGGAGACCATGCTTCATAGGAATACAATCATTCCTTACAATCTACCTAATATCGCTAACAATAATCCTAGGATAGTAGAGAAAAAGATATGTACATATCAAACACTTATTAGCTTTCTAATCACAGCCTAGTCTTTAGTGTATATTGGATATCATAGAAAATTATAGGAAATCATGGTAGAGTGTCTTACTAGCTAATATATTACAACTCACTACTTGTTGTTGCGAACAAACAGTGGCTTCTGAGTGTCCCCGCTGATCTACATTTTCCAGAATTTTGCCATTTACTTCATTTGGAACTCATTCTTCCGTGGTTCAACTCGAATTTTCTGCTGAGTTTGCTTCAGAGATGTCATCTGCTTCAAGTTCTCATAATTCAAAATGACAAGGTGTGATAAGTTCTAATGTTTGTTTAATGGTTTAATTGGCTTCACGTACAGCACCACTTAATGATGTGAAATTTATCCATTCAACACTCCAAATGATCACTATCACATATAACATGATTTATTACCATATATGTATCATTACATCTTATGTATGTTGTGGTGTCTTTCGTTGTCAACAGAAAAAGTCGCATTTAGCAGGATGGGCTACTCAACCAAGTGTTCCTAATTGTATCGTATCACACCTAACTTTTATTCAGTTTAAAGGATTTGAAGGAGTTCCAGATGAGCTATTATTTGCTGAGTATATTCTGCAAAAAGGACTTGTTTTGAAAACAATGATTATTGATGATATTTCAGTGGACCTAAGCAAGAAGTACGACATTCTCAATAAGATATCTAAAGTGCGAAGGGATGGAATTTGCCCACTTATATTTGACTGA
Protein sequence

>MS.gene36804.t1

MADSNSKWSSLLRPSSSSRLKPTLLQSTMAESNSNRSSFLSPYDRQIAMMQQLTRAESNSNRSSLIYPSFSKPIPILPQSTMAELNSKWQKVAENKDRISEKEDRISGLPDCMLSHILSFLPTKIYVQTSVLASRWRHIWKNLSVLSFSDDSFKLNVNSIKITDERFKHFLIFAGFVNSVFTLRRYSIDTWVRSIIGPDLKELDLIVFGDLSLYGPINIESLFAKEVIRLPSLKKLELRAIDMPEMNAFLVGCPILETLNTYLLHDDYADFNVADFCVPPTLKRLKISVHACNGGFVAHCFHYINITQIRFSDVGDLQNMVRASLDVFHSSSDTFAFASLLRLLNALSGIKYLALSCSTTKKKSHLAGWATQPSVPNCIVSHLTFIQFKGFEGVPDELLFAEYILQKGLVLKTMIIDDISVDLSKKYDILNKISKVRRDGICPLIFD